HEADER TRANSFERASE 29-NOV-21 7W58 TITLE CRYSTAL STRUCTURE OF ACYL-CARRIER PROTEIN SYNTHASE FROM MYCOBACTERIUM TITLE 2 SMEGMATIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 4'-PHOSPHOPANTETHEINYL TRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.8.7; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOLICIBACTERIUM SMEGMATIS; SOURCE 3 ORGANISM_TAXID: 1772; SOURCE 4 GENE: ACPS, NCTC7017_04197; SOURCE 5 EXPRESSION_SYSTEM: MYCOLICIBACTERIUM SMEGMATIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 1772 KEYWDS ACPS, MYCOBACTERIUM SMEGMATIS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.YADAV,I.BHATIA,B.K.BISWAL REVDAT 3 29-NOV-23 7W58 1 REMARK REVDAT 2 20-JUL-22 7W58 1 JRNL REVDAT 1 29-JUN-22 7W58 0 JRNL AUTH I.BHATIA,S.YADAV,B.K.BISWAL JRNL TITL IDENTIFICATION, STRUCTURE DETERMINATION AND ANALYSIS OF JRNL TITL 2 MYCOBACTERIUM SMEGMATIS ACYL-CARRIER PROTEIN SYNTHASE (ACPS) JRNL TITL 3 CRYSTALLIZED SERENDIPITOUSLY. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 78 252 2022 JRNL REFN ESSN 2053-230X JRNL PMID 35787552 JRNL DOI 10.1107/S2053230X22005738 REMARK 2 REMARK 2 RESOLUTION. 2.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.63 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 6425 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 321 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.27 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 481 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.01 REMARK 3 BIN R VALUE (WORKING SET) : 0.3030 REMARK 3 BIN FREE R VALUE SET COUNT : 11 REMARK 3 BIN FREE R VALUE : 0.2600 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 985 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 9 REMARK 3 SOLVENT ATOMS : 97 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.08000 REMARK 3 B22 (A**2) : -0.08000 REMARK 3 B33 (A**2) : 0.27000 REMARK 3 B12 (A**2) : -0.04000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.282 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.194 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.143 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.128 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1017 ; 0.004 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1382 ; 1.125 ; 1.639 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 130 ; 6.118 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 52 ;29.172 ;20.769 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 163 ;16.754 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;16.242 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 141 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 773 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7W58 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1300026016. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-SEP-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E+ SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5417 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6746 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 8.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.4400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3GWM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM ACETATE TRIHYDRATE, PEG 3350, REMARK 280 PH 7, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.82000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 19.52599 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 28.59300 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 33.82000 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 19.52599 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 28.59300 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 33.82000 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 19.52599 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 28.59300 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 39.05197 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 57.18600 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 39.05197 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 57.18600 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 39.05197 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 57.18600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 379 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 72 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 21 43.83 -107.46 REMARK 500 LYS A 71 -66.62 -99.55 REMARK 500 GLU A 117 -143.60 -109.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 397 DISTANCE = 5.88 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 203 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 49 NE2 REMARK 620 2 HIS A 116 NE2 108.8 REMARK 620 3 HOH A 371 O 94.4 107.6 REMARK 620 4 HOH A 385 O 97.7 151.1 80.9 REMARK 620 N 1 2 3 DBREF1 7W58 A 1 130 UNP A0A8B4R1L0_MYCSM DBREF2 7W58 A A0A8B4R1L0 1 130 SEQRES 1 A 130 MET ALA ILE VAL GLY VAL GLY ILE ASP LEU VAL SER ILE SEQRES 2 A 130 PRO ASP PHE ALA GLU GLN VAL ASP ARG PRO GLY THR VAL SEQRES 3 A 130 PHE ALA GLU THR PHE THR PRO GLY GLU ARG ARG ASP ALA SEQRES 4 A 130 ALA ASP LYS SER SER SER ALA ALA ARG HIS LEU ALA ALA SEQRES 5 A 130 ARG TRP ALA ALA LYS GLU ALA VAL ILE LYS ALA TRP SER SEQRES 6 A 130 SER SER ARG PHE SER LYS ARG PRO ALA LEU PRO GLU GLY SEQRES 7 A 130 ILE HIS ARG ASP ILE GLU VAL VAL THR ASP MET TRP GLY SEQRES 8 A 130 ARG PRO LYS VAL ARG LEU SER GLY GLU ILE ALA LYS HIS SEQRES 9 A 130 LEU GLU ASP VAL THR ILE HIS VAL SER LEU THR HIS GLU SEQRES 10 A 130 ASP GLN THR ALA ALA ALA VAL ALA ILE ILE GLU GLU PRO HET EDO A 201 4 HET EDO A 202 4 HET NI A 203 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM NI NICKEL (II) ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 2(C2 H6 O2) FORMUL 4 NI NI 2+ FORMUL 5 HOH *97(H2 O) HELIX 1 AA1 ILE A 13 ASP A 21 1 9 HELIX 2 AA2 THR A 25 THR A 30 5 6 HELIX 3 AA3 THR A 32 ALA A 40 1 9 HELIX 4 AA4 SER A 44 SER A 66 1 23 HELIX 5 AA5 GLY A 78 ASP A 82 1 5 HELIX 6 AA6 SER A 98 LEU A 105 1 8 SHEET 1 AA1 3 ILE A 3 SER A 12 0 SHEET 2 AA1 3 THR A 120 GLU A 128 -1 O ILE A 127 N VAL A 4 SHEET 3 AA1 3 THR A 109 HIS A 116 -1 N HIS A 111 O ILE A 126 SHEET 1 AA2 2 ILE A 83 THR A 87 0 SHEET 2 AA2 2 PRO A 93 LEU A 97 -1 O ARG A 96 N GLU A 84 LINK NE2 HIS A 49 NI NI A 203 1555 1555 2.20 LINK NE2 HIS A 116 NI NI A 203 1555 1555 2.02 LINK NI NI A 203 O HOH A 371 1555 1555 2.27 LINK NI NI A 203 O HOH A 385 1555 1555 2.58 CRYST1 67.640 67.640 85.779 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014784 0.008536 0.000000 0.00000 SCALE2 0.000000 0.017071 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011658 0.00000 TER 990 PRO A 130 HETATM 991 C1 EDO A 201 -26.376 -7.608 -13.320 1.00 34.71 C HETATM 992 O1 EDO A 201 -25.185 -7.086 -12.759 1.00 32.58 O HETATM 993 C2 EDO A 201 -26.428 -7.737 -14.792 1.00 34.54 C HETATM 994 O2 EDO A 201 -27.747 -7.632 -15.263 1.00 34.03 O HETATM 995 C1 EDO A 202 -22.491 -1.672 10.907 1.00 43.40 C HETATM 996 O1 EDO A 202 -21.378 -2.083 11.691 1.00 39.02 O HETATM 997 C2 EDO A 202 -23.658 -2.604 10.926 1.00 45.90 C HETATM 998 O2 EDO A 202 -23.539 -3.795 10.156 1.00 44.27 O HETATM 999 NI NI A 203 -11.969 8.518 -7.718 1.00 49.66 NI HETATM 1000 O HOH A 301 -22.827 -5.864 -17.884 1.00 36.02 O HETATM 1001 O HOH A 302 -25.803 -10.115 -11.324 1.00 36.99 O HETATM 1002 O HOH A 303 -25.751 -8.650 -7.336 1.00 27.86 O HETATM 1003 O HOH A 304 -23.150 2.860 -10.375 1.00 39.17 O HETATM 1004 O HOH A 305 -20.067 -17.418 -5.277 1.00 50.75 O HETATM 1005 O HOH A 306 -18.084 3.298 -22.325 1.00 40.28 O HETATM 1006 O HOH A 307 -5.152 -9.026 -5.299 1.00 39.92 O HETATM 1007 O HOH A 308 -8.124 -8.405 -5.338 1.00 40.28 O HETATM 1008 O HOH A 309 -21.219 -5.576 0.135 1.00 58.70 O HETATM 1009 O HOH A 310 -7.002 -5.522 24.532 1.00 37.33 O HETATM 1010 O HOH A 311 -22.093 -4.132 20.404 1.00 40.40 O HETATM 1011 O HOH A 312 -22.889 -5.019 13.409 1.00 44.94 O HETATM 1012 O HOH A 313 -9.458 5.618 7.117 1.00 38.79 O HETATM 1013 O HOH A 314 -15.140 0.191 -21.961 1.00 44.22 O HETATM 1014 O HOH A 315 -14.762 3.736 -3.846 1.00 30.66 O HETATM 1015 O HOH A 316 -9.671 -1.074 19.489 1.00 31.36 O HETATM 1016 O HOH A 317 -18.173 -8.114 -15.826 1.00 41.84 O HETATM 1017 O HOH A 318 -27.020 -1.043 -14.371 1.00 50.84 O HETATM 1018 O HOH A 319 -11.093 4.322 -15.645 1.00 36.94 O HETATM 1019 O HOH A 320 -20.716 3.227 -0.261 1.00 48.24 O HETATM 1020 O HOH A 321 -21.264 -4.607 17.353 1.00 51.01 O HETATM 1021 O HOH A 322 -12.368 -4.926 -18.783 1.00 33.93 O HETATM 1022 O HOH A 323 -13.276 -15.633 14.813 1.00 42.25 O HETATM 1023 O HOH A 324 -6.993 2.938 17.721 1.00 32.16 O HETATM 1024 O HOH A 325 -18.720 -5.826 15.334 1.00 23.14 O HETATM 1025 O HOH A 326 -1.311 -2.555 22.922 1.00 40.91 O HETATM 1026 O HOH A 327 -7.620 9.178 -7.692 1.00 40.06 O HETATM 1027 O HOH A 328 -5.485 -8.515 -8.035 1.00 46.17 O HETATM 1028 O HOH A 329 -13.443 -8.881 19.472 1.00 24.95 O HETATM 1029 O HOH A 330 -20.979 2.592 -16.189 1.00 31.97 O HETATM 1030 O HOH A 331 -21.339 -17.302 -13.115 1.00 31.41 O HETATM 1031 O HOH A 332 -23.418 -2.125 -2.599 1.00 43.74 O HETATM 1032 O HOH A 333 -14.694 -2.905 -19.590 1.00 39.50 O HETATM 1033 O HOH A 334 -25.752 -7.932 -3.230 1.00 46.51 O HETATM 1034 O HOH A 335 -0.981 -9.547 8.769 1.00 42.03 O HETATM 1035 O HOH A 336 -17.341 4.607 -3.894 1.00 42.62 O HETATM 1036 O HOH A 337 -8.956 8.073 -12.201 1.00 53.22 O HETATM 1037 O HOH A 338 -6.768 -7.434 -9.974 1.00 26.88 O HETATM 1038 O HOH A 339 -15.741 8.482 11.054 1.00 32.11 O HETATM 1039 O HOH A 340 -24.385 -4.165 7.442 1.00 46.44 O HETATM 1040 O HOH A 341 -17.961 7.698 -15.614 1.00 33.26 O HETATM 1041 O HOH A 342 -1.079 2.631 -14.532 1.00 52.14 O HETATM 1042 O HOH A 343 -14.319 -2.950 23.672 1.00 31.49 O HETATM 1043 O HOH A 344 -5.026 -10.087 23.036 1.00 42.68 O HETATM 1044 O HOH A 345 -3.749 -13.193 4.936 1.00 27.74 O HETATM 1045 O HOH A 346 -9.320 4.726 11.551 1.00 39.20 O HETATM 1046 O HOH A 347 -14.128 -13.915 13.236 1.00 31.40 O HETATM 1047 O HOH A 348 -9.901 -6.966 21.640 1.00 36.64 O HETATM 1048 O HOH A 349 -14.403 8.545 -16.744 1.00 35.64 O HETATM 1049 O HOH A 350 -21.991 -6.116 6.739 1.00 41.89 O HETATM 1050 O HOH A 351 -0.522 -15.598 10.008 1.00 30.62 O HETATM 1051 O HOH A 352 -11.732 6.333 6.125 1.00 44.40 O HETATM 1052 O HOH A 353 -16.306 -15.474 -7.345 1.00 36.35 O HETATM 1053 O HOH A 354 -10.211 3.820 8.984 1.00 22.59 O HETATM 1054 O HOH A 355 -9.294 6.384 2.113 1.00 20.85 O HETATM 1055 O HOH A 356 -18.156 -15.231 7.784 1.00 40.31 O HETATM 1056 O HOH A 357 -24.115 -10.679 -13.230 1.00 32.78 O HETATM 1057 O HOH A 358 -23.272 0.964 -2.042 1.00 51.16 O HETATM 1058 O HOH A 359 -13.169 -12.690 20.194 1.00 37.18 O HETATM 1059 O HOH A 360 -4.349 -2.665 -15.054 1.00 56.99 O HETATM 1060 O HOH A 361 -17.723 5.650 -19.439 1.00 46.95 O HETATM 1061 O HOH A 362 -10.843 -8.145 -19.957 1.00 46.78 O HETATM 1062 O HOH A 363 -19.484 2.096 9.795 1.00 39.50 O HETATM 1063 O HOH A 364 -12.678 -15.832 17.817 1.00 36.57 O HETATM 1064 O HOH A 365 -10.977 5.964 -18.229 1.00 48.55 O HETATM 1065 O HOH A 366 -19.289 -3.889 0.461 1.00 23.57 O HETATM 1066 O HOH A 367 -14.918 4.212 -23.442 1.00 37.71 O HETATM 1067 O HOH A 368 -11.831 -2.324 22.657 1.00 47.07 O HETATM 1068 O HOH A 369 -9.129 1.760 -19.146 1.00 39.78 O HETATM 1069 O HOH A 370 -14.283 1.579 10.001 1.00 54.41 O HETATM 1070 O HOH A 371 -11.645 9.000 -5.523 1.00 51.92 O HETATM 1071 O HOH A 372 -7.118 -0.230 19.507 1.00 47.79 O HETATM 1072 O HOH A 373 -21.304 2.393 -19.114 1.00 54.87 O HETATM 1073 O HOH A 374 -7.937 8.096 -5.083 1.00 37.38 O HETATM 1074 O HOH A 375 -12.681 3.477 8.572 1.00 34.81 O HETATM 1075 O HOH A 376 -12.511 -9.511 24.414 1.00 55.01 O HETATM 1076 O HOH A 377 -12.133 3.040 12.381 1.00 52.18 O HETATM 1077 O HOH A 378 -18.214 -8.480 23.371 1.00 52.62 O HETATM 1078 O HOH A 379 0.000 0.000 -10.807 0.33 32.32 O HETATM 1079 O HOH A 380 -25.845 0.080 -2.930 1.00 38.31 O HETATM 1080 O HOH A 381 -26.187 -12.592 -10.081 1.00 45.72 O HETATM 1081 O HOH A 382 -24.747 0.202 0.831 1.00 53.33 O HETATM 1082 O HOH A 383 -23.068 4.252 1.845 1.00 48.58 O HETATM 1083 O HOH A 384 -12.148 9.540 -10.502 1.00 55.27 O HETATM 1084 O HOH A 385 -12.589 11.022 -7.754 1.00 42.24 O HETATM 1085 O HOH A 386 -22.139 6.372 4.298 1.00 47.93 O HETATM 1086 O HOH A 387 -27.371 -0.849 6.237 1.00 42.43 O HETATM 1087 O HOH A 388 -12.858 1.145 -23.132 1.00 43.49 O HETATM 1088 O HOH A 389 -4.870 -13.953 2.983 1.00 30.89 O HETATM 1089 O HOH A 390 -11.276 -9.287 20.772 1.00 27.53 O HETATM 1090 O HOH A 391 -26.909 -5.209 8.050 1.00 50.18 O HETATM 1091 O HOH A 392 -10.294 11.176 -9.092 1.00 45.15 O HETATM 1092 O HOH A 393 -6.265 -11.312 -5.805 1.00 42.45 O HETATM 1093 O HOH A 394 -10.902 0.001 21.777 1.00 38.99 O HETATM 1094 O HOH A 395 -16.713 7.948 -20.835 1.00 46.89 O HETATM 1095 O HOH A 396 -15.268 -14.462 -9.537 1.00 36.16 O HETATM 1096 O HOH A 397 -17.007 4.488 -25.745 1.00 49.23 O CONECT 356 999 CONECT 883 999 CONECT 991 992 993 CONECT 992 991 CONECT 993 991 994 CONECT 994 993 CONECT 995 996 997 CONECT 996 995 CONECT 997 995 998 CONECT 998 997 CONECT 999 356 883 1070 1084 CONECT 1070 999 CONECT 1084 999 MASTER 334 0 3 6 5 0 0 6 1091 1 13 10 END