HEADER MEMBRANE PROTEIN 04-DEC-21 7W78 TITLE HEME EXPORTER HRTBA IN COMPLEX WITH MG-AMPPNP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ABC TRANSPORT SYSTEM, ATP-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PUTATIVE ABC TRANSPORT SYSTEM INTEGRAL MEMBRANE PROTEIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM DIPHTHERIAE NCTC 13129; SOURCE 3 ORGANISM_TAXID: 257309; SOURCE 4 STRAIN: ATCC 700971 / NCTC 13129 / BIOTYPE GRAVIS; SOURCE 5 GENE: DIP2323; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: STAR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PRSET-C; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM DIPHTHERIAE NCTC 13129; SOURCE 13 ORGANISM_TAXID: 257309; SOURCE 14 STRAIN: ATCC 700971 / NCTC 13129 / BIOTYPE GRAVIS; SOURCE 15 GENE: DIP2324; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_VARIANT: STAR; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PRSET-C KEYWDS HEME EFFLUX, HEME DETOXIFICATION, HEME EXTRACTION, ABC TRANSPORTER, KEYWDS 2 4-HELIX TMD, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.HISANO,H.NAKAMURA,M.M.RAHMAN,T.TOSHA,M.SHIROUZU,Y.SHIRO REVDAT 3 29-NOV-23 7W78 1 REMARK REVDAT 2 11-JAN-23 7W78 1 JRNL REVDAT 1 22-JUN-22 7W78 0 JRNL AUTH H.NAKAMURA,T.HISANO,M.M.RAHMAN,T.TOSHA,M.SHIROUZU,Y.SHIRO JRNL TITL STRUCTURAL BASIS FOR HEME DETOXIFICATION BY AN ATP-BINDING JRNL TITL 2 CASSETTE-TYPE EFFLUX PUMP IN GRAM-POSITIVE PATHOGENIC JRNL TITL 3 BACTERIA. JRNL REF PROC.NATL.ACAD.SCI.USA V. 119 85119 2022 JRNL REFN ESSN 1091-6490 JRNL PMID 35767641 JRNL DOI 10.1073/PNAS.2123385119 REMARK 2 REMARK 2 RESOLUTION. 2.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.7 REMARK 3 NUMBER OF REFLECTIONS : 27575 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.920 REMARK 3 FREE R VALUE TEST SET COUNT : 1908 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.4000 - 6.9438 0.99 2242 166 0.2104 0.2319 REMARK 3 2 6.9438 - 5.5140 1.00 2140 158 0.2168 0.2704 REMARK 3 3 5.5140 - 4.8177 1.00 2110 157 0.2052 0.2338 REMARK 3 4 4.8177 - 4.3776 1.00 2094 155 0.1880 0.2180 REMARK 3 5 4.3776 - 4.0640 0.99 2072 151 0.1943 0.2235 REMARK 3 6 4.0640 - 3.8245 0.98 2056 152 0.2076 0.2158 REMARK 3 7 3.8245 - 3.6330 0.97 1994 143 0.2143 0.2286 REMARK 3 8 3.6330 - 3.4749 0.95 1970 150 0.2280 0.2889 REMARK 3 9 3.4749 - 3.3412 0.94 1940 147 0.2367 0.2795 REMARK 3 10 3.3412 - 3.2259 0.93 1921 142 0.2451 0.2532 REMARK 3 11 3.2259 - 3.1251 0.89 1820 139 0.2657 0.2826 REMARK 3 12 3.1251 - 3.0357 0.83 1704 124 0.2893 0.3572 REMARK 3 13 3.0357 - 2.9558 0.54 1100 86 0.3357 0.3358 REMARK 3 14 2.9558 - 2.8840 0.25 504 38 0.3249 0.4479 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4311 REMARK 3 ANGLE : 0.896 5869 REMARK 3 CHIRALITY : 0.047 718 REMARK 3 PLANARITY : 0.005 741 REMARK 3 DIHEDRAL : 15.605 2558 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 66.2296 95.2984 26.9912 REMARK 3 T TENSOR REMARK 3 T11: 0.5224 T22: 0.2651 REMARK 3 T33: 0.0430 T12: 0.2234 REMARK 3 T13: 0.0176 T23: -0.1193 REMARK 3 L TENSOR REMARK 3 L11: 0.8388 L22: 0.4934 REMARK 3 L33: 1.1285 L12: 0.1080 REMARK 3 L13: -0.4650 L23: 0.2373 REMARK 3 S TENSOR REMARK 3 S11: -0.0234 S12: 0.2776 S13: -0.1125 REMARK 3 S21: -0.3345 S22: -0.0612 S23: 0.0006 REMARK 3 S31: 0.0444 S32: -0.2198 S33: -0.0312 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 66 THROUGH 88 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.0707 91.2095 29.5327 REMARK 3 T TENSOR REMARK 3 T11: 0.5007 T22: 0.3584 REMARK 3 T33: 0.2760 T12: -0.0056 REMARK 3 T13: -0.1094 T23: -0.2328 REMARK 3 L TENSOR REMARK 3 L11: 1.0568 L22: 0.1266 REMARK 3 L33: 1.2033 L12: 0.2712 REMARK 3 L13: -0.4227 L23: -0.3525 REMARK 3 S TENSOR REMARK 3 S11: -0.2168 S12: 0.4745 S13: -0.4076 REMARK 3 S21: -0.5495 S22: 0.0651 S23: 0.1992 REMARK 3 S31: 0.4445 S32: -0.3510 S33: 0.1983 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 89 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.8733 91.9888 49.2450 REMARK 3 T TENSOR REMARK 3 T11: 0.3057 T22: 0.1386 REMARK 3 T33: 0.3686 T12: 0.0913 REMARK 3 T13: -0.0105 T23: 0.0096 REMARK 3 L TENSOR REMARK 3 L11: 1.8146 L22: 0.8599 REMARK 3 L33: 2.5784 L12: -1.0388 REMARK 3 L13: 0.5765 L23: 0.4654 REMARK 3 S TENSOR REMARK 3 S11: -0.0136 S12: -0.2529 S13: -0.7445 REMARK 3 S21: -0.1417 S22: -0.0412 S23: 0.4878 REMARK 3 S31: 0.5655 S32: -0.3384 S33: -0.1085 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): 60.3648 91.9627 49.6197 REMARK 3 T TENSOR REMARK 3 T11: 0.1659 T22: 0.1504 REMARK 3 T33: 0.1569 T12: 0.2329 REMARK 3 T13: 0.0157 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 0.9709 L22: 1.0428 REMARK 3 L33: 0.7872 L12: -0.5600 REMARK 3 L13: -0.2576 L23: -0.0670 REMARK 3 S TENSOR REMARK 3 S11: -0.0946 S12: -0.0884 S13: -0.2694 REMARK 3 S21: -0.0531 S22: -0.0218 S23: 0.1797 REMARK 3 S31: 0.1090 S32: -0.0560 S33: 0.0265 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 172 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 65.9659 80.7819 46.5340 REMARK 3 T TENSOR REMARK 3 T11: 0.4917 T22: 0.1777 REMARK 3 T33: 0.3338 T12: 0.1997 REMARK 3 T13: 0.0186 T23: 0.0541 REMARK 3 L TENSOR REMARK 3 L11: 0.4675 L22: 0.9532 REMARK 3 L33: 0.2496 L12: -0.3231 REMARK 3 L13: -0.2443 L23: 0.2783 REMARK 3 S TENSOR REMARK 3 S11: 0.0177 S12: 0.0436 S13: -0.2170 REMARK 3 S21: -0.0441 S22: -0.1345 S23: -0.0617 REMARK 3 S31: 0.2469 S32: 0.0641 S33: -0.4061 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 189 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 72.2742 86.5057 34.5934 REMARK 3 T TENSOR REMARK 3 T11: 0.4001 T22: 0.2346 REMARK 3 T33: 0.2977 T12: 0.2382 REMARK 3 T13: 0.0703 T23: -0.0628 REMARK 3 L TENSOR REMARK 3 L11: 1.1469 L22: 1.2853 REMARK 3 L33: 0.0987 L12: 0.3124 REMARK 3 L13: -0.1336 L23: -0.2418 REMARK 3 S TENSOR REMARK 3 S11: -0.0500 S12: 0.3083 S13: -0.4561 REMARK 3 S21: -0.3046 S22: -0.1246 S23: -0.2906 REMARK 3 S31: 0.2639 S32: 0.0818 S33: -0.1038 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.8021 121.5916 52.0646 REMARK 3 T TENSOR REMARK 3 T11: 0.4624 T22: 0.4312 REMARK 3 T33: 0.2862 T12: 0.4983 REMARK 3 T13: 0.0924 T23: 0.1042 REMARK 3 L TENSOR REMARK 3 L11: 0.4282 L22: 0.5023 REMARK 3 L33: 0.1612 L12: -0.1915 REMARK 3 L13: -0.0951 L23: 0.0398 REMARK 3 S TENSOR REMARK 3 S11: 0.0956 S12: 0.0845 S13: -0.2662 REMARK 3 S21: 0.0358 S22: 0.0582 S23: 0.3348 REMARK 3 S31: -0.0921 S32: -0.1096 S33: 0.1770 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 179 THROUGH 200 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.6489 143.5802 37.3416 REMARK 3 T TENSOR REMARK 3 T11: 1.0356 T22: 0.3015 REMARK 3 T33: 0.4797 T12: 0.0546 REMARK 3 T13: -0.2922 T23: -0.0827 REMARK 3 L TENSOR REMARK 3 L11: 1.0242 L22: 0.1557 REMARK 3 L33: 0.0911 L12: -0.4005 REMARK 3 L13: -0.3075 L23: 0.1210 REMARK 3 S TENSOR REMARK 3 S11: 0.1321 S12: 0.5479 S13: -0.5202 REMARK 3 S21: -1.0227 S22: 0.0774 S23: 0.4169 REMARK 3 S31: 0.4674 S32: -0.1567 S33: 0.0721 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 201 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.5691 140.7673 36.6820 REMARK 3 T TENSOR REMARK 3 T11: 0.8981 T22: 0.3581 REMARK 3 T33: 0.5597 T12: 0.3293 REMARK 3 T13: -0.0433 T23: -0.0987 REMARK 3 L TENSOR REMARK 3 L11: 0.4085 L22: 0.2011 REMARK 3 L33: 0.2822 L12: 0.2087 REMARK 3 L13: -0.1822 L23: -0.2306 REMARK 3 S TENSOR REMARK 3 S11: -0.1309 S12: 0.1912 S13: -0.3789 REMARK 3 S21: -0.5707 S22: -0.1969 S23: 0.1843 REMARK 3 S31: -0.0052 S32: -0.0810 S33: 0.0032 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 214 THROUGH 344 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.7919 120.2214 44.0909 REMARK 3 T TENSOR REMARK 3 T11: 0.2394 T22: 0.4567 REMARK 3 T33: 0.3800 T12: 0.5044 REMARK 3 T13: 0.0752 T23: 0.0428 REMARK 3 L TENSOR REMARK 3 L11: 0.3227 L22: 1.0246 REMARK 3 L33: 0.2535 L12: -0.4446 REMARK 3 L13: 0.0275 L23: -0.0183 REMARK 3 S TENSOR REMARK 3 S11: 0.0927 S12: 0.0078 S13: -0.2948 REMARK 3 S21: -0.0488 S22: 0.0992 S23: 0.3590 REMARK 3 S31: -0.2562 S32: -0.3306 S33: 0.2001 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 43 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.2599 144.1843 38.8328 REMARK 3 T TENSOR REMARK 3 T11: 0.7408 T22: 0.2692 REMARK 3 T33: 0.4374 T12: 0.1272 REMARK 3 T13: -0.2481 T23: 0.0650 REMARK 3 L TENSOR REMARK 3 L11: 2.0574 L22: 0.4360 REMARK 3 L33: 2.0783 L12: -0.8362 REMARK 3 L13: 1.1138 L23: -0.8274 REMARK 3 S TENSOR REMARK 3 S11: 0.4125 S12: 0.4047 S13: -0.2425 REMARK 3 S21: -0.9784 S22: -0.0672 S23: 0.5556 REMARK 3 S31: 0.5934 S32: -0.2427 S33: -0.1795 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 83 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.4027 152.1100 56.3375 REMARK 3 T TENSOR REMARK 3 T11: 0.2253 T22: 0.0832 REMARK 3 T33: 0.2628 T12: 0.0635 REMARK 3 T13: 0.0849 T23: 0.1215 REMARK 3 L TENSOR REMARK 3 L11: 1.9467 L22: 1.6155 REMARK 3 L33: 1.4667 L12: 0.1401 REMARK 3 L13: 0.1299 L23: 0.1163 REMARK 3 S TENSOR REMARK 3 S11: 0.2287 S12: -0.3513 S13: -0.1215 REMARK 3 S21: 0.2206 S22: -0.0487 S23: 0.1680 REMARK 3 S31: 0.3474 S32: 0.0319 S33: -0.1195 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7W78 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1300026105. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31561 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.880 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 28.40 REMARK 200 R MERGE (I) : 0.11300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 18.30 REMARK 200 R MERGE FOR SHELL (I) : 0.86300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 6LLP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 78.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 400, 10 MM MG ACETATE, 0.1 M REMARK 280 MES PH 6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 84.49050 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 84.49050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 47.33250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 84.49050 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 84.49050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 47.33250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 84.49050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 84.49050 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 47.33250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 84.49050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 84.49050 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 47.33250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 168.98100 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 168.98100 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 94.66500 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 456 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ALA A 221 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 220 OG1 CG2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLN A 219 CG CD OE1 NE2 REMARK 480 ARG B 14 NE CZ NH1 NH2 REMARK 480 GLU B 78 CG CD OE1 OE2 REMARK 480 GLN B 191 CG CD OE1 NE2 REMARK 480 LYS B 207 CG CD CE NZ REMARK 480 GLN B 248 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CG GLN A 219 O HOH A 443 2.02 REMARK 500 NH2 ARG B 329 O HOH B 501 2.16 REMARK 500 O HOH A 413 O HOH A 471 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 11 64.25 61.01 REMARK 500 ASP A 18 59.94 -106.81 REMARK 500 ALA B 11 65.06 -154.94 REMARK 500 ARG B 79 -72.57 -62.38 REMARK 500 GLN B 191 -146.99 -99.87 REMARK 500 PRO B 193 118.77 -38.01 REMARK 500 GLN B 198 -168.86 -74.97 REMARK 500 GLN B 248 1.68 -66.07 REMARK 500 ALA B 297 21.57 -77.80 REMARK 500 LEU B 304 116.91 -161.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 533 DISTANCE = 6.07 ANGSTROMS REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 MYZ B 402 REMARK 610 MYZ B 403 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 50 OG REMARK 620 2 GLN A 90 OE1 81.7 REMARK 620 3 ANP A 302 O2B 78.2 159.5 REMARK 620 4 ANP A 302 O3G 154.2 110.9 86.1 REMARK 620 5 HOH A 411 O 88.5 83.2 91.8 71.5 REMARK 620 6 HOH A 426 O 100.4 91.8 96.1 101.5 169.1 REMARK 620 N 1 2 3 4 5 DBREF 7W78 A 1 221 UNP Q6NEF2 Q6NEF2_CORDI 1 221 DBREF 7W78 B 1 344 UNP Q6NEF1 Q6NEF1_CORDI 1 344 SEQRES 1 A 221 MET SER ALA ALA PRO VAL LEU SER ILE THR ASN ALA SER SEQRES 2 A 221 VAL VAL TYR PRO ASP GLY ILE SER THR VAL THR ALA LEU SEQRES 3 A 221 ASP SER ALA ASN VAL GLU ILE PHE PRO GLY GLU LEU VAL SEQRES 4 A 221 ALA ILE VAL GLY GLU SER GLY SER GLY LYS SER THR LEU SEQRES 5 A 221 LEU SER ILE ALA GLY PHE LEU GLN GLU PRO THR SER GLY SEQRES 6 A 221 THR VAL THR LEU HIS GLY ALA GLU GLY LEU ASP ALA THR SEQRES 7 A 221 SER THR ARG ARG GLU HIS ILE GLY PHE VAL PHE GLN GLN SEQRES 8 A 221 PRO ASN LEU LEU GLY SER LEU THR ALA ARG GLU GLN LEU SEQRES 9 A 221 LEU ILE THR ASP HIS LEU ARG GLY ILE LYS PRO ARG LYS SEQRES 10 A 221 ASP ARG ALA ASP GLU LEU LEU ALA ARG VAL GLY LEU LYS SEQRES 11 A 221 GLY LEU GLY GLY ARG ARG VAL ALA GLN LEU SER GLY GLY SEQRES 12 A 221 GLN ARG GLN ARG VAL ASN ILE ALA ARG ALA LEU MET GLY SEQRES 13 A 221 ASN PRO GLN LEU LEU LEU ALA ASP GLU PRO THR SER ALA SEQRES 14 A 221 LEU ASP ALA ARG LEU SER LYS GLU ILE VAL GLU LEU LEU SEQRES 15 A 221 ARG ASP VAL THR LYS GLU PHE ALA LEU ALA THR LEU MET SEQRES 16 A 221 VAL THR HIS ASP ARG SER GLN LEU ALA TYR ALA ASP ARG SEQRES 17 A 221 PHE VAL GLU MET ALA ASP GLY LYS ALA LEU GLN THR ALA SEQRES 1 B 344 MET PHE LEU GLY ILE ARG ASP ILE ARG ALA ALA ALA GLY SEQRES 2 B 344 ARG PHE ALA LEU ILE ALA SER VAL VAL GLY LEU ILE THR SEQRES 3 B 344 LEU LEU ILE VAL MET LEU THR GLY LEU THR GLN GLY LEU SEQRES 4 B 344 GLY LYS GLN ASN THR SER ALA ILE GLU ALA LEU ALA PRO SEQRES 5 B 344 HIS SER VAL VAL PHE THR THR ALA GLY GLY SER SER PRO SEQRES 6 B 344 GLU PHE THR SER SER GLU ILE SER GLU GLN GLN ALA GLU SEQRES 7 B 344 ARG TRP LYS ASP SER THR PRO LEU GLY VAL SER GLN THR SEQRES 8 B 344 ARG ILE GLU SER ASP GLN ASN ALA ASN THR THR ALA VAL SEQRES 9 B 344 MET GLY LEU PRO GLU GLY THR PRO LEU PRO ASP SER VAL SEQRES 10 B 344 GLY GLY PHE ILE GLU GLN GLY ALA LEU LEU PRO ALA GLU SEQRES 11 B 344 LEU ALA ASP PHE LEU HIS VAL ARG ALA GLY ASP HIS ILE SEQRES 12 B 344 THR LEU GLY GLY ALA THR VAL THR VAL ALA GLY THR VAL SEQRES 13 B 344 LYS THR GLU ASN TYR SER HIS THR PRO VAL VAL TRP VAL SEQRES 14 B 344 ASP THR ALA THR TRP GLN LEU VAL SER HIS THR LYS ALA SEQRES 15 B 344 VAL GLY THR VAL LEU LEU LEU ASN GLN GLU PRO THR ILE SEQRES 16 B 344 GLN PRO GLN ASP ASN GLU VAL VAL THR ASP LEU LYS GLY SEQRES 17 B 344 ALA PHE GLN ALA MET PRO ALA TYR LYS SER GLU ARG SER SEQRES 18 B 344 SER LEU LEU SER MET GLN ALA PHE LEU TYR ILE ILE SER SEQRES 19 B 344 ALA LEU VAL THR VAL ALA PHE LEU THR VAL TRP THR LEU SEQRES 20 B 344 GLN ARG THR ARG ASP ILE ALA VAL LEU ALA ALA LEU GLY SEQRES 21 B 344 ALA SER LYS ARG TYR LEU LEU ILE ASP ALA LEU GLY GLN SEQRES 22 B 344 ALA ALA ILE ILE LEU ALA ALA GLY VAL ALA LEU GLY ALA SEQRES 23 B 344 GLY ILE GLY ALA LEU LEU GLY TRP LEU ILE ALA GLY SER SEQRES 24 B 344 VAL PRO PHE SER LEU GLY TRP VAL SER VAL LEU GLY PRO SEQRES 25 B 344 ALA LEU GLY ILE TRP LEU LEU GLY LEU ILE GLY ALA THR SEQRES 26 B 344 ILE ALA VAL ARG ASN VAL THR LYS VAL ASP PRO GLN ILE SEQRES 27 B 344 ALA LEU GLY ALA THR ALA HET MG A 301 1 HET ANP A 302 31 HET ACT A 303 4 HET ACT A 304 4 HET GOL B 401 6 HET MYZ B 402 14 HET MYZ B 403 14 HET D12 B 404 12 HETNAM MG MAGNESIUM ION HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER HETNAM ACT ACETATE ION HETNAM GOL GLYCEROL HETNAM MYZ MYRISTOLEIC ACID HETNAM D12 DODECANE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN MYZ Z-TETRADEC-9-ENOIC ACID FORMUL 3 MG MG 2+ FORMUL 4 ANP C10 H17 N6 O12 P3 FORMUL 5 ACT 2(C2 H3 O2 1-) FORMUL 7 GOL C3 H8 O3 FORMUL 8 MYZ 2(C14 H26 O2) FORMUL 10 D12 C12 H26 FORMUL 11 HOH *116(H2 O) HELIX 1 AA1 GLY A 48 GLY A 57 1 10 HELIX 2 AA2 ASP A 76 HIS A 84 1 9 HELIX 3 AA3 THR A 99 ARG A 111 1 13 HELIX 4 AA4 ARG A 116 VAL A 127 1 12 HELIX 5 AA5 ARG A 136 LEU A 140 5 5 HELIX 6 AA6 SER A 141 LEU A 154 1 14 HELIX 7 AA7 ASP A 171 PHE A 189 1 19 HELIX 8 AA8 ASP A 199 ALA A 206 5 8 HELIX 9 AA9 PHE B 2 ALA B 11 1 10 HELIX 10 AB1 ALA B 11 ALA B 51 1 41 HELIX 11 AB2 SER B 73 TRP B 80 1 8 HELIX 12 AB3 ALA B 129 HIS B 136 1 8 HELIX 13 AB4 THR B 171 HIS B 179 1 9 HELIX 14 AB5 LEU B 206 ALA B 212 1 7 HELIX 15 AB6 MET B 213 LEU B 247 1 35 HELIX 16 AB7 ARG B 249 GLY B 260 1 12 HELIX 17 AB8 SER B 262 ALA B 297 1 36 HELIX 18 AB9 VAL B 309 LYS B 333 1 25 HELIX 19 AC1 ASP B 335 THR B 343 1 9 SHEET 1 AA1 3 SER A 21 ILE A 33 0 SHEET 2 AA1 3 LEU A 7 ASP A 18 -1 N ILE A 9 O VAL A 31 SHEET 3 AA1 3 SER A 64 LEU A 69 -1 O THR A 68 N SER A 8 SHEET 1 AA2 6 ILE A 85 VAL A 88 0 SHEET 2 AA2 6 LEU A 160 ASP A 164 1 O LEU A 162 N VAL A 88 SHEET 3 AA2 6 ALA A 192 VAL A 196 1 O ALA A 192 N LEU A 161 SHEET 4 AA2 6 GLU A 37 GLY A 43 1 N VAL A 39 O THR A 193 SHEET 5 AA2 6 ARG A 208 ALA A 213 1 O VAL A 210 N VAL A 42 SHEET 6 AA2 6 LYS A 216 ALA A 217 -1 O LYS A 216 N ALA A 213 SHEET 1 AA3 7 ASN B 160 TYR B 161 0 SHEET 2 AA3 7 THR B 164 ASP B 170 -1 O THR B 164 N TYR B 161 SHEET 3 AA3 7 ALA B 99 LEU B 107 1 N ALA B 103 O VAL B 167 SHEET 4 AA3 7 SER B 83 GLU B 94 -1 N ILE B 93 O ASN B 100 SHEET 5 AA3 7 VAL B 186 LEU B 189 -1 O LEU B 188 N THR B 84 SHEET 6 AA3 7 SER B 54 THR B 58 -1 N SER B 54 O LEU B 189 SHEET 7 AA3 7 GLU B 201 ASP B 205 -1 O THR B 204 N VAL B 55 SHEET 1 AA4 9 ASN B 160 TYR B 161 0 SHEET 2 AA4 9 THR B 164 ASP B 170 -1 O THR B 164 N TYR B 161 SHEET 3 AA4 9 ALA B 125 PRO B 128 -1 N LEU B 126 O TRP B 168 SHEET 4 AA4 9 ALA B 148 VAL B 156 1 O ALA B 153 N ALA B 125 SHEET 5 AA4 9 HIS B 142 LEU B 145 -1 N LEU B 145 O ALA B 148 SHEET 6 AA4 9 SER B 83 GLU B 94 -1 N GLU B 94 O THR B 144 SHEET 7 AA4 9 VAL B 186 LEU B 189 -1 O LEU B 188 N THR B 84 SHEET 8 AA4 9 SER B 54 THR B 58 -1 N SER B 54 O LEU B 189 SHEET 9 AA4 9 GLU B 201 ASP B 205 -1 O THR B 204 N VAL B 55 LINK OG SER A 50 MG MG A 301 1555 1555 2.08 LINK OE1 GLN A 90 MG MG A 301 1555 1555 2.06 LINK MG MG A 301 O2B ANP A 302 1555 1555 2.12 LINK MG MG A 301 O3G ANP A 302 1555 1555 2.02 LINK MG MG A 301 O HOH A 411 1555 1555 2.10 LINK MG MG A 301 O HOH A 426 1555 1555 2.05 CRYST1 168.981 168.981 94.665 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005918 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005918 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010564 0.00000