HEADER MEMBRANE PROTEIN 04-DEC-21 7W79 TITLE HEME EXPORTER HRTBA IN COMPLEX WITH MN-AMPPNP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ABC TRANSPORT SYSTEM, ATP-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PUTATIVE ABC TRANSPORT SYSTEM INTEGRAL MEMBRANE PROTEIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM DIPHTHERIAE NCTC 13129; SOURCE 3 ORGANISM_TAXID: 257309; SOURCE 4 STRAIN: ATCC 700971 / NCTC 13129 / BIOTYPE GRAVIS; SOURCE 5 GENE: DIP2323; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: STAR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PRSET-C; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM DIPHTHERIAE NCTC 13129; SOURCE 13 ORGANISM_TAXID: 257309; SOURCE 14 STRAIN: ATCC 700971 / NCTC 13129 / BIOTYPE GRAVIS; SOURCE 15 GENE: DIP2324; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_VARIANT: STAR; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PRSET-C KEYWDS HEME EFFLUX, HEME EXTRACTION, HEME DETOXIFICATION, ABC TRANSPORTER, KEYWDS 2 4-HELIX TMD, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.HISANO,H.NAKAMURA,M.M.RAHMAN,T.TOSHA,M.SHIROUZU,Y.SHIRO REVDAT 3 29-MAY-24 7W79 1 REMARK REVDAT 2 21-DEC-22 7W79 1 JRNL REVDAT 1 22-JUN-22 7W79 0 JRNL AUTH H.NAKAMURA,T.HISANO,M.M.RAHMAN,T.TOSHA,M.SHIROUZU,Y.SHIRO JRNL TITL STRUCTURAL BASIS FOR HEME DETOXIFICATION BY AN ATP-BINDING JRNL TITL 2 CASSETTE-TYPE EFFLUX PUMP IN GRAM-POSITIVE PATHOGENIC JRNL TITL 3 BACTERIA. JRNL REF PROC.NATL.ACAD.SCI.USA V. 119 85119 2022 JRNL REFN ESSN 1091-6490 JRNL PMID 35767641 JRNL DOI 10.1073/PNAS.2123385119 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 24947 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.180 REMARK 3 FREE R VALUE TEST SET COUNT : 1792 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.5400 - 7.2818 0.99 1961 150 0.2135 0.2463 REMARK 3 2 7.2818 - 5.7829 1.00 1883 146 0.2270 0.2178 REMARK 3 3 5.7829 - 5.0527 1.00 1847 143 0.1972 0.2290 REMARK 3 4 5.0527 - 4.5911 1.00 1832 143 0.1771 0.2114 REMARK 3 5 4.5911 - 4.2623 1.00 1824 142 0.1860 0.2454 REMARK 3 6 4.2623 - 4.0111 1.00 1823 141 0.2036 0.2467 REMARK 3 7 4.0111 - 3.8103 0.98 1762 136 0.2182 0.2708 REMARK 3 8 3.8103 - 3.6445 0.99 1779 140 0.2299 0.3013 REMARK 3 9 3.6445 - 3.5043 0.97 1757 139 0.2307 0.2813 REMARK 3 10 3.5043 - 3.3834 0.98 1746 133 0.2534 0.2536 REMARK 3 11 3.3834 - 3.2776 0.95 1714 133 0.2530 0.3432 REMARK 3 12 3.2776 - 3.1839 0.93 1670 126 0.2743 0.3094 REMARK 3 13 3.1839 - 3.1001 0.86 1557 120 0.3241 0.3759 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.02 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 90.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4214 REMARK 3 ANGLE : 1.140 5750 REMARK 3 CHIRALITY : 0.053 709 REMARK 3 PLANARITY : 0.007 728 REMARK 3 DIHEDRAL : 15.483 2503 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7W79 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1300026106. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.89236 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28470 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.990 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 14.00 REMARK 200 R MERGE (I) : 0.12400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.04 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 9.40 REMARK 200 R MERGE FOR SHELL (I) : 0.95100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 78.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 4000, 10 MM NA ACETATE, 10 MM REMARK 280 MNCL2, 0.1 M MES PH 6.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 84.68450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 84.68450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 47.52650 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 84.68450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 84.68450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 47.52650 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 84.68450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 84.68450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 47.52650 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 84.68450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 84.68450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 47.52650 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -100.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 169.36900 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 169.36900 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 95.05300 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLN A 219 REMARK 465 THR A 220 REMARK 465 ALA A 221 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 73 CG CD OE1 OE2 REMARK 470 GLN B 191 CG CD OE1 NE2 REMARK 470 GLU B 192 CG CD OE1 OE2 REMARK 470 THR B 194 OG1 CG2 REMARK 470 ILE B 195 CG1 CG2 CD1 REMARK 470 ASN B 200 CG OD1 ND2 REMARK 470 THR B 204 OG1 CG2 REMARK 470 ASP B 205 CG OD1 OD2 REMARK 470 LYS B 207 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 108 NH1 ARG A 116 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 110 CA - CB - CG ANGL. DEV. = 18.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 11 73.62 59.20 REMARK 500 ASP A 18 62.69 -112.41 REMARK 500 SER A 21 -160.49 -74.84 REMARK 500 ALA A 72 3.17 -161.29 REMARK 500 GLU A 165 61.20 60.10 REMARK 500 ASP A 171 152.97 -48.79 REMARK 500 ALA A 204 -37.20 -35.70 REMARK 500 ALA B 11 67.14 -154.57 REMARK 500 ALA B 51 71.56 38.35 REMARK 500 ILE B 121 106.92 -55.29 REMARK 500 ASP B 141 -179.78 -67.12 REMARK 500 SER B 162 52.29 26.65 REMARK 500 HIS B 163 19.91 80.31 REMARK 500 GLN B 191 -145.47 -88.13 REMARK 500 ILE B 195 167.58 173.75 REMARK 500 VAL B 202 119.63 -166.78 REMARK 500 SER B 218 11.77 -65.38 REMARK 500 ALA B 228 -60.69 -91.48 REMARK 500 ILE B 232 -74.88 -59.98 REMARK 500 LEU B 291 -73.00 -47.05 REMARK 500 ALA B 297 79.63 -62.03 REMARK 500 SER B 299 41.21 -82.66 REMARK 500 VAL B 307 1.48 -68.91 REMARK 500 VAL B 309 -60.44 -128.35 REMARK 500 LEU B 310 -8.96 -56.06 REMARK 500 LEU B 340 0.66 -64.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 304 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 50 OG REMARK 620 2 GLN A 90 OE1 74.9 REMARK 620 3 ATP A 301 O2G 174.2 99.3 REMARK 620 4 ATP A 301 O2B 81.4 143.0 103.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 305 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 165 OE2 REMARK 620 2 ALA A 169 O 80.2 REMARK 620 N 1 DBREF 7W79 A 1 221 UNP Q6NEF2 Q6NEF2_CORDI 1 221 DBREF 7W79 B 1 344 UNP Q6NEF1 Q6NEF1_CORDI 1 344 SEQRES 1 A 221 MET SER ALA ALA PRO VAL LEU SER ILE THR ASN ALA SER SEQRES 2 A 221 VAL VAL TYR PRO ASP GLY ILE SER THR VAL THR ALA LEU SEQRES 3 A 221 ASP SER ALA ASN VAL GLU ILE PHE PRO GLY GLU LEU VAL SEQRES 4 A 221 ALA ILE VAL GLY GLU SER GLY SER GLY LYS SER THR LEU SEQRES 5 A 221 LEU SER ILE ALA GLY PHE LEU GLN GLU PRO THR SER GLY SEQRES 6 A 221 THR VAL THR LEU HIS GLY ALA GLU GLY LEU ASP ALA THR SEQRES 7 A 221 SER THR ARG ARG GLU HIS ILE GLY PHE VAL PHE GLN GLN SEQRES 8 A 221 PRO ASN LEU LEU GLY SER LEU THR ALA ARG GLU GLN LEU SEQRES 9 A 221 LEU ILE THR ASP HIS LEU ARG GLY ILE LYS PRO ARG LYS SEQRES 10 A 221 ASP ARG ALA ASP GLU LEU LEU ALA ARG VAL GLY LEU LYS SEQRES 11 A 221 GLY LEU GLY GLY ARG ARG VAL ALA GLN LEU SER GLY GLY SEQRES 12 A 221 GLN ARG GLN ARG VAL ASN ILE ALA ARG ALA LEU MET GLY SEQRES 13 A 221 ASN PRO GLN LEU LEU LEU ALA ASP GLU PRO THR SER ALA SEQRES 14 A 221 LEU ASP ALA ARG LEU SER LYS GLU ILE VAL GLU LEU LEU SEQRES 15 A 221 ARG ASP VAL THR LYS GLU PHE ALA LEU ALA THR LEU MET SEQRES 16 A 221 VAL THR HIS ASP ARG SER GLN LEU ALA TYR ALA ASP ARG SEQRES 17 A 221 PHE VAL GLU MET ALA ASP GLY LYS ALA LEU GLN THR ALA SEQRES 1 B 344 MET PHE LEU GLY ILE ARG ASP ILE ARG ALA ALA ALA GLY SEQRES 2 B 344 ARG PHE ALA LEU ILE ALA SER VAL VAL GLY LEU ILE THR SEQRES 3 B 344 LEU LEU ILE VAL MET LEU THR GLY LEU THR GLN GLY LEU SEQRES 4 B 344 GLY LYS GLN ASN THR SER ALA ILE GLU ALA LEU ALA PRO SEQRES 5 B 344 HIS SER VAL VAL PHE THR THR ALA GLY GLY SER SER PRO SEQRES 6 B 344 GLU PHE THR SER SER GLU ILE SER GLU GLN GLN ALA GLU SEQRES 7 B 344 ARG TRP LYS ASP SER THR PRO LEU GLY VAL SER GLN THR SEQRES 8 B 344 ARG ILE GLU SER ASP GLN ASN ALA ASN THR THR ALA VAL SEQRES 9 B 344 MET GLY LEU PRO GLU GLY THR PRO LEU PRO ASP SER VAL SEQRES 10 B 344 GLY GLY PHE ILE GLU GLN GLY ALA LEU LEU PRO ALA GLU SEQRES 11 B 344 LEU ALA ASP PHE LEU HIS VAL ARG ALA GLY ASP HIS ILE SEQRES 12 B 344 THR LEU GLY GLY ALA THR VAL THR VAL ALA GLY THR VAL SEQRES 13 B 344 LYS THR GLU ASN TYR SER HIS THR PRO VAL VAL TRP VAL SEQRES 14 B 344 ASP THR ALA THR TRP GLN LEU VAL SER HIS THR LYS ALA SEQRES 15 B 344 VAL GLY THR VAL LEU LEU LEU ASN GLN GLU PRO THR ILE SEQRES 16 B 344 GLN PRO GLN ASP ASN GLU VAL VAL THR ASP LEU LYS GLY SEQRES 17 B 344 ALA PHE GLN ALA MET PRO ALA TYR LYS SER GLU ARG SER SEQRES 18 B 344 SER LEU LEU SER MET GLN ALA PHE LEU TYR ILE ILE SER SEQRES 19 B 344 ALA LEU VAL THR VAL ALA PHE LEU THR VAL TRP THR LEU SEQRES 20 B 344 GLN ARG THR ARG ASP ILE ALA VAL LEU ALA ALA LEU GLY SEQRES 21 B 344 ALA SER LYS ARG TYR LEU LEU ILE ASP ALA LEU GLY GLN SEQRES 22 B 344 ALA ALA ILE ILE LEU ALA ALA GLY VAL ALA LEU GLY ALA SEQRES 23 B 344 GLY ILE GLY ALA LEU LEU GLY TRP LEU ILE ALA GLY SER SEQRES 24 B 344 VAL PRO PHE SER LEU GLY TRP VAL SER VAL LEU GLY PRO SEQRES 25 B 344 ALA LEU GLY ILE TRP LEU LEU GLY LEU ILE GLY ALA THR SEQRES 26 B 344 ILE ALA VAL ARG ASN VAL THR LYS VAL ASP PRO GLN ILE SEQRES 27 B 344 ALA LEU GLY ALA THR ALA HET ATP A 301 43 HET MN A 302 1 HET MN A 303 1 HET MN A 304 1 HET MN A 305 1 HET MN B 401 1 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM MN MANGANESE (II) ION FORMUL 3 ATP C10 H16 N5 O13 P3 FORMUL 4 MN 5(MN 2+) HELIX 1 AA1 GLY A 48 GLY A 57 1 10 HELIX 2 AA2 ASP A 76 HIS A 84 1 9 HELIX 3 AA3 THR A 99 ARG A 111 1 13 HELIX 4 AA4 ARG A 116 VAL A 127 1 12 HELIX 5 AA5 ARG A 136 LEU A 140 5 5 HELIX 6 AA6 SER A 141 LEU A 154 1 14 HELIX 7 AA7 ASP A 171 PHE A 189 1 19 HELIX 8 AA8 ASP A 199 ALA A 206 5 8 HELIX 9 AA9 PHE B 2 ALA B 11 1 10 HELIX 10 AB1 ALA B 11 LEU B 50 1 40 HELIX 11 AB2 GLU B 66 SER B 70 5 5 HELIX 12 AB3 GLN B 75 TRP B 80 1 6 HELIX 13 AB4 ALA B 129 HIS B 136 1 8 HELIX 14 AB5 THR B 171 HIS B 179 1 9 HELIX 15 AB6 LEU B 206 PHE B 210 1 5 HELIX 16 AB7 MET B 213 GLN B 248 1 36 HELIX 17 AB8 ARG B 249 GLY B 260 1 12 HELIX 18 AB9 SER B 262 LEU B 295 1 34 HELIX 19 AC1 VAL B 309 LYS B 333 1 25 HELIX 20 AC2 ASP B 335 LEU B 340 1 6 SHEET 1 AA1 3 SER A 21 ILE A 33 0 SHEET 2 AA1 3 LEU A 7 ASP A 18 -1 N ILE A 9 O VAL A 31 SHEET 3 AA1 3 SER A 64 LEU A 69 -1 O THR A 68 N SER A 8 SHEET 1 AA2 6 ILE A 85 VAL A 88 0 SHEET 2 AA2 6 LEU A 160 ASP A 164 1 O LEU A 162 N GLY A 86 SHEET 3 AA2 6 ALA A 192 VAL A 196 1 O VAL A 196 N ALA A 163 SHEET 4 AA2 6 LEU A 38 GLY A 43 1 N VAL A 39 O THR A 193 SHEET 5 AA2 6 PHE A 209 ALA A 213 1 O VAL A 210 N ALA A 40 SHEET 6 AA2 6 LYS A 216 ALA A 217 -1 O LYS A 216 N ALA A 213 SHEET 1 AA3 7 ASN B 160 TYR B 161 0 SHEET 2 AA3 7 THR B 164 ASP B 170 -1 O THR B 164 N TYR B 161 SHEET 3 AA3 7 ALA B 99 LEU B 107 1 N ALA B 103 O VAL B 167 SHEET 4 AA3 7 SER B 83 GLU B 94 -1 N ILE B 93 O ASN B 100 SHEET 5 AA3 7 VAL B 186 LEU B 189 -1 O LEU B 188 N THR B 84 SHEET 6 AA3 7 SER B 54 THR B 58 -1 N SER B 54 O LEU B 189 SHEET 7 AA3 7 GLU B 201 ASP B 205 -1 O VAL B 202 N PHE B 57 SHEET 1 AA4 9 ASN B 160 TYR B 161 0 SHEET 2 AA4 9 THR B 164 ASP B 170 -1 O THR B 164 N TYR B 161 SHEET 3 AA4 9 ALA B 125 PRO B 128 -1 N LEU B 126 O TRP B 168 SHEET 4 AA4 9 ALA B 148 VAL B 156 1 O THR B 151 N ALA B 125 SHEET 5 AA4 9 HIS B 142 LEU B 145 -1 N LEU B 145 O ALA B 148 SHEET 6 AA4 9 SER B 83 GLU B 94 -1 N GLU B 94 O THR B 144 SHEET 7 AA4 9 VAL B 186 LEU B 189 -1 O LEU B 188 N THR B 84 SHEET 8 AA4 9 SER B 54 THR B 58 -1 N SER B 54 O LEU B 189 SHEET 9 AA4 9 GLU B 201 ASP B 205 -1 O VAL B 202 N PHE B 57 LINK OE1 GLU A 32 MN MN A 302 1555 1555 2.74 LINK OG SER A 50 MN MN A 304 1555 1555 2.13 LINK OE1 GLN A 90 MN MN A 304 1555 1555 2.23 LINK OE2 GLU A 165 MN MN A 305 1555 1555 2.26 LINK O ALA A 169 MN MN A 305 1555 8666 2.47 LINK O2G ATP A 301 MN MN A 304 1555 1555 2.51 LINK O2B ATP A 301 MN MN A 304 1555 1555 2.68 CISPEP 1 GLY B 298 SER B 299 0 13.56 CRYST1 169.369 169.369 95.053 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005904 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005904 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010520 0.00000