HEADER VIRAL PROTEIN/IMMUNE SYSTEM 17-DEC-21 7WBZ TITLE CRYSTAL STRUCTURE OF THE SARS-COV-2 RBD IN COMPLEX WITH FAB 2303 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RECEPTOR BINDING DOMAIN; COMPND 5 SYNONYM: S GLYCOPROTEIN,E2,PEPLOMER PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: 2303 HEAVY CHAIN; COMPND 9 CHAIN: H; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: 2303 LIGHT CHAIN; COMPND 13 CHAIN: L; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_TAXID: 2697049; SOURCE 5 GENE: S, 2; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA AFF. FRUGIPERDA 1 BOLD-2017; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 2449148; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS VIRAL PROTEIN, IMMUNE SYSTEM, VIRAL PROTEIN-IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.XIANG,B.MA REVDAT 3 23-OCT-24 7WBZ 1 REMARK REVDAT 2 29-NOV-23 7WBZ 1 REMARK REVDAT 1 31-AUG-22 7WBZ 0 JRNL AUTH R.LI,M.MOR,B.MA,A.E.CLARK,J.ALTER,M.WERBNER,J.C.LEE, JRNL AUTH 2 S.L.LEIBEL,A.F.CARLIN,M.DESSAU,M.GAL-TANAMY,B.A.CROKER, JRNL AUTH 3 Y.XIANG,N.T.FREUND JRNL TITL CONFORMATIONAL FLEXIBILITY IN NEUTRALIZATION OF SARS-COV-2 JRNL TITL 2 BY NATURALLY ELICITED ANTI-SARS-COV-2 ANTIBODIES. JRNL REF COMMUN BIOL V. 5 789 2022 JRNL REFN ESSN 2399-3642 JRNL PMID 35931732 JRNL DOI 10.1038/S42003-022-03739-5 REMARK 2 REMARK 2 RESOLUTION. 2.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.09 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 35382 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.220 REMARK 3 FREE R VALUE TEST SET COUNT : 1848 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 20.0900 - 5.6500 0.99 2694 144 0.1596 0.1620 REMARK 3 2 5.6500 - 4.5000 1.00 2643 130 0.1286 0.1555 REMARK 3 3 4.5000 - 3.9400 1.00 2614 150 0.1356 0.1716 REMARK 3 4 3.9400 - 3.5800 1.00 2535 190 0.1764 0.2337 REMARK 3 5 3.5800 - 3.3300 1.00 2571 171 0.1925 0.2295 REMARK 3 6 3.3300 - 3.1300 1.00 2591 141 0.2095 0.2552 REMARK 3 7 3.1300 - 2.9700 1.00 2556 156 0.2201 0.2350 REMARK 3 8 2.9700 - 2.8500 1.00 2606 101 0.2213 0.2711 REMARK 3 9 2.8500 - 2.7400 1.00 2574 146 0.2189 0.2932 REMARK 3 10 2.7400 - 2.6400 1.00 2568 136 0.2392 0.2804 REMARK 3 11 2.6400 - 2.5600 1.00 2565 133 0.2357 0.3172 REMARK 3 12 2.5600 - 2.4900 1.00 2600 111 0.2461 0.3024 REMARK 3 13 2.4900 - 2.4200 0.95 2417 139 0.2586 0.3126 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.540 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 27 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 334 THROUGH 358 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.3661 -4.4040 -12.5444 REMARK 3 T TENSOR REMARK 3 T11: 0.4594 T22: 0.2614 REMARK 3 T33: 0.4396 T12: 0.0353 REMARK 3 T13: -0.0068 T23: 0.0162 REMARK 3 L TENSOR REMARK 3 L11: 6.1651 L22: 7.3207 REMARK 3 L33: 8.4978 L12: 4.5150 REMARK 3 L13: -3.0114 L23: -4.0034 REMARK 3 S TENSOR REMARK 3 S11: 0.2160 S12: 0.0694 S13: 0.3017 REMARK 3 S21: 0.6588 S22: 0.0754 S23: -0.4483 REMARK 3 S31: -1.4271 S32: 0.0107 S33: -0.2535 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 359 THROUGH 370 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.4700 -2.6700 -21.5095 REMARK 3 T TENSOR REMARK 3 T11: 0.6320 T22: 0.9137 REMARK 3 T33: 0.4959 T12: -0.2457 REMARK 3 T13: -0.0073 T23: 0.0647 REMARK 3 L TENSOR REMARK 3 L11: 6.7796 L22: 9.3716 REMARK 3 L33: 8.0445 L12: 0.6860 REMARK 3 L13: 3.6421 L23: -3.0489 REMARK 3 S TENSOR REMARK 3 S11: -0.4586 S12: 0.9951 S13: -0.1407 REMARK 3 S21: 0.7931 S22: 0.0218 S23: -0.5032 REMARK 3 S31: -1.3491 S32: 2.1783 S33: 0.4143 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 371 THROUGH 393 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.2451 -10.9358 -22.3035 REMARK 3 T TENSOR REMARK 3 T11: 0.3193 T22: 0.6254 REMARK 3 T33: 0.4924 T12: -0.0534 REMARK 3 T13: 0.0303 T23: 0.0511 REMARK 3 L TENSOR REMARK 3 L11: 1.0028 L22: 4.1199 REMARK 3 L33: 9.8687 L12: -1.2811 REMARK 3 L13: -0.0018 L23: -4.5594 REMARK 3 S TENSOR REMARK 3 S11: 0.0006 S12: 0.3448 S13: -0.1330 REMARK 3 S21: -0.0348 S22: -0.2202 S23: -0.4661 REMARK 3 S31: -0.3814 S32: 1.1685 S33: 0.1988 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 394 THROUGH 442 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.6026 -17.5219 -12.0516 REMARK 3 T TENSOR REMARK 3 T11: 0.2475 T22: 0.3270 REMARK 3 T33: 0.4191 T12: 0.0138 REMARK 3 T13: -0.0213 T23: 0.0144 REMARK 3 L TENSOR REMARK 3 L11: 1.9764 L22: 2.6607 REMARK 3 L33: 3.5527 L12: 0.6199 REMARK 3 L13: -0.0420 L23: -0.7835 REMARK 3 S TENSOR REMARK 3 S11: 0.0404 S12: 0.1209 S13: 0.0348 REMARK 3 S21: -0.0395 S22: 0.0007 S23: -0.1203 REMARK 3 S31: -0.2135 S32: 0.2885 S33: -0.0505 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 443 THROUGH 469 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.9574 -17.8681 -5.3420 REMARK 3 T TENSOR REMARK 3 T11: 0.3115 T22: 0.2817 REMARK 3 T33: 0.4802 T12: 0.0575 REMARK 3 T13: 0.0222 T23: 0.0749 REMARK 3 L TENSOR REMARK 3 L11: 3.0687 L22: 2.4736 REMARK 3 L33: 6.4946 L12: -0.4633 REMARK 3 L13: -1.3815 L23: -0.6165 REMARK 3 S TENSOR REMARK 3 S11: -0.0044 S12: -0.1445 S13: -0.0157 REMARK 3 S21: 0.3641 S22: 0.2395 S23: 0.4940 REMARK 3 S31: -0.3703 S32: -0.2264 S33: -0.2744 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 470 THROUGH 494 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.6119 -25.3784 0.8610 REMARK 3 T TENSOR REMARK 3 T11: 0.4439 T22: 0.4607 REMARK 3 T33: 0.8787 T12: 0.1160 REMARK 3 T13: 0.1690 T23: 0.1643 REMARK 3 L TENSOR REMARK 3 L11: 2.0077 L22: 2.3603 REMARK 3 L33: 2.3258 L12: -1.9946 REMARK 3 L13: -0.1474 L23: -0.6673 REMARK 3 S TENSOR REMARK 3 S11: 0.2318 S12: 0.0972 S13: 0.4112 REMARK 3 S21: 0.6034 S22: 0.4274 S23: 1.5142 REMARK 3 S31: -0.1691 S32: -0.5579 S33: -0.5893 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 495 THROUGH 516 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.5088 -15.4130 -4.4903 REMARK 3 T TENSOR REMARK 3 T11: 0.4339 T22: 0.2618 REMARK 3 T33: 0.3825 T12: -0.0516 REMARK 3 T13: -0.0030 T23: -0.0077 REMARK 3 L TENSOR REMARK 3 L11: 3.1023 L22: 2.8574 REMARK 3 L33: 2.5108 L12: 0.0933 REMARK 3 L13: -0.4803 L23: -2.6561 REMARK 3 S TENSOR REMARK 3 S11: 0.2513 S12: -0.0384 S13: -0.0715 REMARK 3 S21: 0.4126 S22: -0.0820 S23: -0.0511 REMARK 3 S31: 0.2486 S32: 0.1840 S33: -0.2747 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 517 THROUGH 527 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.3639 -3.7594 -32.3381 REMARK 3 T TENSOR REMARK 3 T11: 0.8386 T22: 0.5676 REMARK 3 T33: 0.5765 T12: -0.1948 REMARK 3 T13: -0.0846 T23: 0.1766 REMARK 3 L TENSOR REMARK 3 L11: 7.7176 L22: 2.9464 REMARK 3 L33: 8.8472 L12: 2.8032 REMARK 3 L13: 6.6817 L23: 3.1332 REMARK 3 S TENSOR REMARK 3 S11: 1.4453 S12: -0.5919 S13: -1.1678 REMARK 3 S21: 0.5994 S22: 0.0880 S23: -0.1079 REMARK 3 S31: 1.2868 S32: -0.4199 S33: -1.1527 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.9982 -53.1926 -2.7009 REMARK 3 T TENSOR REMARK 3 T11: 0.3176 T22: 0.3740 REMARK 3 T33: 0.5719 T12: -0.0482 REMARK 3 T13: -0.0492 T23: 0.0805 REMARK 3 L TENSOR REMARK 3 L11: 5.9431 L22: 3.4183 REMARK 3 L33: 6.6896 L12: -2.2172 REMARK 3 L13: -3.5885 L23: 2.7820 REMARK 3 S TENSOR REMARK 3 S11: 0.3493 S12: 0.5696 S13: 0.3470 REMARK 3 S21: -0.1916 S22: -0.3249 S23: 0.5675 REMARK 3 S31: 0.1111 S32: -0.8446 S33: -0.0010 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 18 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.6266 -42.6259 -3.2202 REMARK 3 T TENSOR REMARK 3 T11: 0.2944 T22: 0.3289 REMARK 3 T33: 0.5650 T12: 0.0136 REMARK 3 T13: -0.0261 T23: 0.0592 REMARK 3 L TENSOR REMARK 3 L11: 5.1606 L22: 5.9325 REMARK 3 L33: 0.9132 L12: -1.7613 REMARK 3 L13: -0.8465 L23: -0.2396 REMARK 3 S TENSOR REMARK 3 S11: 0.0524 S12: 0.1275 S13: -0.2671 REMARK 3 S21: -0.1484 S22: 0.0793 S23: 1.3880 REMARK 3 S31: 0.0380 S32: -0.4188 S33: -0.1422 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 40 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.2021 -40.0384 -3.2375 REMARK 3 T TENSOR REMARK 3 T11: 0.1996 T22: 0.2436 REMARK 3 T33: 0.3902 T12: 0.0327 REMARK 3 T13: -0.0360 T23: -0.0169 REMARK 3 L TENSOR REMARK 3 L11: 0.4948 L22: 3.2158 REMARK 3 L33: 8.8194 L12: 1.1479 REMARK 3 L13: -0.4983 L23: -3.1691 REMARK 3 S TENSOR REMARK 3 S11: 0.0773 S12: 0.0418 S13: 0.1245 REMARK 3 S21: -0.2491 S22: 0.0151 S23: 0.1660 REMARK 3 S31: 0.3210 S32: -0.1321 S33: 0.0270 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 60 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.0814 -44.9324 -3.5959 REMARK 3 T TENSOR REMARK 3 T11: 0.2113 T22: 0.2774 REMARK 3 T33: 0.4631 T12: -0.0072 REMARK 3 T13: -0.0644 T23: 0.0383 REMARK 3 L TENSOR REMARK 3 L11: 1.0294 L22: 5.0959 REMARK 3 L33: 2.7770 L12: -1.4724 REMARK 3 L13: -1.1373 L23: -0.0514 REMARK 3 S TENSOR REMARK 3 S11: 0.1298 S12: 0.1773 S13: -0.0163 REMARK 3 S21: -0.2198 S22: -0.0205 S23: 0.5817 REMARK 3 S31: 0.0626 S32: -0.1704 S33: -0.1260 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 114 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.2041 -72.5934 13.0952 REMARK 3 T TENSOR REMARK 3 T11: 0.1425 T22: 0.1958 REMARK 3 T33: 0.2976 T12: 0.0188 REMARK 3 T13: 0.0414 T23: -0.0633 REMARK 3 L TENSOR REMARK 3 L11: 2.5137 L22: 5.4058 REMARK 3 L33: 4.9661 L12: 0.1365 REMARK 3 L13: 0.2719 L23: -2.0288 REMARK 3 S TENSOR REMARK 3 S11: -0.0357 S12: -0.1746 S13: -0.0737 REMARK 3 S21: 0.0213 S22: -0.0525 S23: -0.3437 REMARK 3 S31: 0.4476 S32: 0.0086 S33: 0.0014 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 139 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.3076 -69.5192 16.1215 REMARK 3 T TENSOR REMARK 3 T11: 0.2918 T22: 0.3505 REMARK 3 T33: 0.2547 T12: -0.0105 REMARK 3 T13: 0.0440 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: -0.0145 L22: 2.0309 REMARK 3 L33: 1.9964 L12: -0.5036 REMARK 3 L13: 0.4227 L23: -0.6004 REMARK 3 S TENSOR REMARK 3 S11: 0.0882 S12: -0.1215 S13: 0.0053 REMARK 3 S21: 0.1047 S22: -0.0947 S23: -0.0295 REMARK 3 S31: -0.0721 S32: -0.0828 S33: 0.0391 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 180 THROUGH 207 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.2128 -75.0778 21.2051 REMARK 3 T TENSOR REMARK 3 T11: 0.2187 T22: 0.3016 REMARK 3 T33: 0.2415 T12: -0.0236 REMARK 3 T13: 0.0374 T23: -0.0060 REMARK 3 L TENSOR REMARK 3 L11: 2.7458 L22: 3.4030 REMARK 3 L33: 7.8573 L12: 0.1787 REMARK 3 L13: -1.2102 L23: -0.3012 REMARK 3 S TENSOR REMARK 3 S11: -0.0854 S12: -0.1845 S13: -0.1342 REMARK 3 S21: -0.1154 S22: 0.0870 S23: 0.1550 REMARK 3 S31: 0.4524 S32: -0.3562 S33: 0.0230 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 208 THROUGH 219 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.2933 -81.6237 17.9303 REMARK 3 T TENSOR REMARK 3 T11: 0.5467 T22: 0.3750 REMARK 3 T33: 0.3447 T12: 0.0055 REMARK 3 T13: 0.1135 T23: 0.0311 REMARK 3 L TENSOR REMARK 3 L11: 6.6912 L22: 5.2893 REMARK 3 L33: 7.9509 L12: -1.3791 REMARK 3 L13: 5.1684 L23: -2.0155 REMARK 3 S TENSOR REMARK 3 S11: -0.0944 S12: -0.2753 S13: -0.7133 REMARK 3 S21: 0.2934 S22: 0.1426 S23: 0.0589 REMARK 3 S31: 0.6687 S32: -0.0215 S33: -0.3043 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 4 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5396 -38.9997 23.9903 REMARK 3 T TENSOR REMARK 3 T11: 0.6726 T22: 0.3812 REMARK 3 T33: 0.4017 T12: -0.0048 REMARK 3 T13: 0.0571 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 0.2839 L22: 4.7179 REMARK 3 L33: 2.2665 L12: 0.9756 REMARK 3 L13: -0.3610 L23: -2.8098 REMARK 3 S TENSOR REMARK 3 S11: -0.0930 S12: -0.5725 S13: -0.1290 REMARK 3 S21: 0.9134 S22: -0.3802 S23: -0.3540 REMARK 3 S31: -1.0723 S32: 0.6497 S33: 0.4072 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 22 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.3667 -33.9382 12.3523 REMARK 3 T TENSOR REMARK 3 T11: 0.3838 T22: 0.2860 REMARK 3 T33: 0.3237 T12: 0.0655 REMARK 3 T13: 0.0389 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 4.1759 L22: 6.9939 REMARK 3 L33: 4.9565 L12: 3.2867 REMARK 3 L13: -0.9387 L23: -2.8155 REMARK 3 S TENSOR REMARK 3 S11: 0.1610 S12: -0.3040 S13: 0.1573 REMARK 3 S21: 0.7150 S22: -0.1673 S23: 0.0973 REMARK 3 S31: -0.1899 S32: 0.2301 S33: -0.0641 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 42 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1621 -34.4745 16.4756 REMARK 3 T TENSOR REMARK 3 T11: 0.4604 T22: 0.3177 REMARK 3 T33: 0.5195 T12: 0.0786 REMARK 3 T13: 0.1500 T23: 0.0174 REMARK 3 L TENSOR REMARK 3 L11: 2.5735 L22: 3.6735 REMARK 3 L33: 5.5326 L12: -0.8946 REMARK 3 L13: -0.1285 L23: -0.0163 REMARK 3 S TENSOR REMARK 3 S11: -0.1045 S12: -0.2250 S13: 0.0961 REMARK 3 S21: 0.9984 S22: -0.0102 S23: 1.0703 REMARK 3 S31: -0.0687 S32: -0.5204 S33: -0.0427 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 65 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.2579 -30.3859 20.9240 REMARK 3 T TENSOR REMARK 3 T11: 0.7721 T22: 0.3564 REMARK 3 T33: 0.4181 T12: 0.0813 REMARK 3 T13: -0.0397 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 5.5483 L22: 5.0676 REMARK 3 L33: 4.7045 L12: 4.7858 REMARK 3 L13: -4.9884 L23: -4.8085 REMARK 3 S TENSOR REMARK 3 S11: 0.1993 S12: -0.3001 S13: -0.7186 REMARK 3 S21: 1.6803 S22: -0.3870 S23: 0.0182 REMARK 3 S31: -1.2989 S32: 0.2039 S33: 0.0436 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 79 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6227 -39.4910 13.5549 REMARK 3 T TENSOR REMARK 3 T11: 0.3461 T22: 0.2282 REMARK 3 T33: 0.3177 T12: -0.0042 REMARK 3 T13: 0.0360 T23: -0.0373 REMARK 3 L TENSOR REMARK 3 L11: 1.9297 L22: 4.5054 REMARK 3 L33: 8.5488 L12: 0.7146 REMARK 3 L13: -1.3034 L23: -4.2822 REMARK 3 S TENSOR REMARK 3 S11: -0.0024 S12: -0.0060 S13: -0.2120 REMARK 3 S21: 0.5515 S22: -0.0424 S23: 0.0931 REMARK 3 S31: -0.1356 S32: -0.1254 S33: -0.0701 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 107 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.0496 -56.5118 32.8423 REMARK 3 T TENSOR REMARK 3 T11: 0.4317 T22: 0.3145 REMARK 3 T33: 0.2806 T12: 0.0169 REMARK 3 T13: 0.0517 T23: -0.0545 REMARK 3 L TENSOR REMARK 3 L11: 0.6636 L22: 1.5988 REMARK 3 L33: 1.0585 L12: 0.1400 REMARK 3 L13: 0.8481 L23: -0.0699 REMARK 3 S TENSOR REMARK 3 S11: -0.2951 S12: -0.3957 S13: 0.0669 REMARK 3 S21: 1.0396 S22: 0.2688 S23: -0.0283 REMARK 3 S31: -0.0487 S32: 0.2478 S33: -0.0527 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 118 THROUGH 132 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.8825 -77.1160 14.8807 REMARK 3 T TENSOR REMARK 3 T11: 0.3220 T22: 0.3525 REMARK 3 T33: 0.2812 T12: 0.0137 REMARK 3 T13: 0.0120 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 5.8899 L22: 4.2521 REMARK 3 L33: 9.0936 L12: -2.0640 REMARK 3 L13: -1.4708 L23: 3.9354 REMARK 3 S TENSOR REMARK 3 S11: 0.0945 S12: 0.8729 S13: -0.5284 REMARK 3 S21: 0.1580 S22: 0.1420 S23: -0.0631 REMARK 3 S31: 1.0243 S32: -0.1725 S33: -0.2416 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 133 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.0040 -60.4671 24.3609 REMARK 3 T TENSOR REMARK 3 T11: 0.3401 T22: 0.3695 REMARK 3 T33: 0.1979 T12: -0.0307 REMARK 3 T13: -0.0075 T23: 0.0566 REMARK 3 L TENSOR REMARK 3 L11: 8.0739 L22: 4.9559 REMARK 3 L33: 3.8261 L12: -4.6094 REMARK 3 L13: -4.5911 L23: 3.2679 REMARK 3 S TENSOR REMARK 3 S11: 0.3071 S12: 0.0713 S13: 0.4992 REMARK 3 S21: -0.0004 S22: -0.2931 S23: -0.4119 REMARK 3 S31: -0.2155 S32: 0.0282 S33: -0.0099 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 155 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.1644 -59.4197 17.4609 REMARK 3 T TENSOR REMARK 3 T11: 0.3622 T22: 0.3586 REMARK 3 T33: 0.2498 T12: -0.0504 REMARK 3 T13: -0.0031 T23: 0.0446 REMARK 3 L TENSOR REMARK 3 L11: 3.3077 L22: 2.4658 REMARK 3 L33: 3.4740 L12: -0.8540 REMARK 3 L13: -2.9280 L23: 1.7867 REMARK 3 S TENSOR REMARK 3 S11: 0.1807 S12: 0.2572 S13: 0.4509 REMARK 3 S21: 0.2317 S22: -0.1651 S23: -0.2656 REMARK 3 S31: -0.1845 S32: -0.2158 S33: 0.0648 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 168 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.5108 -58.6444 27.2959 REMARK 3 T TENSOR REMARK 3 T11: 0.4451 T22: 0.4303 REMARK 3 T33: 0.4909 T12: -0.0161 REMARK 3 T13: 0.0113 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 5.0513 L22: 4.5354 REMARK 3 L33: 6.5557 L12: -4.7458 REMARK 3 L13: -5.7773 L23: 5.3674 REMARK 3 S TENSOR REMARK 3 S11: -0.0849 S12: 0.2571 S13: -1.1503 REMARK 3 S21: 0.1944 S22: -0.4500 S23: 0.7354 REMARK 3 S31: -0.2350 S32: -0.1217 S33: 0.1619 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 179 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.3164 -68.3923 22.6333 REMARK 3 T TENSOR REMARK 3 T11: 0.2894 T22: 0.3889 REMARK 3 T33: 0.2902 T12: -0.0439 REMARK 3 T13: -0.0200 T23: 0.0430 REMARK 3 L TENSOR REMARK 3 L11: 4.3642 L22: 4.4966 REMARK 3 L33: 1.7796 L12: -3.2477 REMARK 3 L13: -1.2409 L23: 0.8003 REMARK 3 S TENSOR REMARK 3 S11: 0.2546 S12: -0.1672 S13: 0.2551 REMARK 3 S21: 0.3562 S22: 0.0270 S23: -0.9315 REMARK 3 S31: 0.2600 S32: 0.2111 S33: -0.2944 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7WBZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1300026421. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAY-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35465 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 20.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 12.10 REMARK 200 R MERGE (I) : 0.19000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 2.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 10.20 REMARK 200 R MERGE FOR SHELL (I) : 0.75100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7KFV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM TARTRATE DIBASIC REMARK 280 DIHYDRATE, 14% (W/V) POLYETHYLENE GLYCOL 3350, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 309K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.39500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.39500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 42.56700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 74.99150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 42.56700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 74.99150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 72.39500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 42.56700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 74.99150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 72.39500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 42.56700 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 74.99150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 766 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 319 REMARK 465 VAL A 320 REMARK 465 GLN A 321 REMARK 465 PRO A 322 REMARK 465 THR A 323 REMARK 465 GLU A 324 REMARK 465 SER A 325 REMARK 465 ILE A 326 REMARK 465 VAL A 327 REMARK 465 ARG A 328 REMARK 465 PHE A 329 REMARK 465 PRO A 330 REMARK 465 ASN A 331 REMARK 465 ILE A 332 REMARK 465 THR A 333 REMARK 465 LYS A 528 REMARK 465 LYS A 529 REMARK 465 HIS A 530 REMARK 465 HIS A 531 REMARK 465 HIS A 532 REMARK 465 HIS A 533 REMARK 465 HIS A 534 REMARK 465 HIS A 535 REMARK 465 SER H 134 REMARK 465 THR H 135 REMARK 465 SER H 136 REMARK 465 CYS H 220 REMARK 465 ASP H 221 REMARK 465 LYS H 222 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 774 O HOH A 776 1.87 REMARK 500 O HOH L 382 O HOH L 405 1.90 REMARK 500 O HOH H 365 O HOH H 404 1.91 REMARK 500 O HOH H 393 O HOH H 441 1.93 REMARK 500 O HOH A 779 O HOH L 364 1.99 REMARK 500 O HOH H 347 O HOH H 433 2.01 REMARK 500 O ASP H 105 O HOH H 301 2.03 REMARK 500 O VAL H 154 O HOH H 302 2.08 REMARK 500 O HOH L 336 O HOH L 359 2.08 REMARK 500 OD2 ASP H 105 O HOH H 303 2.10 REMARK 500 O HOH H 405 O HOH L 353 2.11 REMARK 500 OD1 ASN H 203 O HOH H 304 2.11 REMARK 500 OG SER L 7 O HOH L 301 2.12 REMARK 500 O HOH A 772 O HOH A 777 2.13 REMARK 500 O HOH L 392 O HOH L 407 2.15 REMARK 500 O ASN A 437 O HOH A 701 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 346 NE - CZ - NH1 ANGL. DEV. = -3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 352 51.06 -111.47 REMARK 500 PHE A 400 -178.30 -173.16 REMARK 500 ASN A 422 -49.87 -135.62 REMARK 500 ASP A 428 37.72 -88.27 REMARK 500 ALA H 100 -108.03 57.69 REMARK 500 SER L 30 -130.06 52.25 REMARK 500 ALA L 51 -39.84 70.19 REMARK 500 VAL L 97 65.09 -107.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH H 446 DISTANCE = 5.92 ANGSTROMS DBREF 7WBZ A 319 529 UNP P0DTC2 SPIKE_SARS2 319 529 DBREF 7WBZ H 1 222 PDB 7WBZ 7WBZ 1 222 DBREF 7WBZ L 1 215 PDB 7WBZ 7WBZ 1 215 SEQADV 7WBZ HIS A 530 UNP P0DTC2 EXPRESSION TAG SEQADV 7WBZ HIS A 531 UNP P0DTC2 EXPRESSION TAG SEQADV 7WBZ HIS A 532 UNP P0DTC2 EXPRESSION TAG SEQADV 7WBZ HIS A 533 UNP P0DTC2 EXPRESSION TAG SEQADV 7WBZ HIS A 534 UNP P0DTC2 EXPRESSION TAG SEQADV 7WBZ HIS A 535 UNP P0DTC2 EXPRESSION TAG SEQRES 1 A 217 ARG VAL GLN PRO THR GLU SER ILE VAL ARG PHE PRO ASN SEQRES 2 A 217 ILE THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA SEQRES 3 A 217 THR ARG PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG SEQRES 4 A 217 ILE SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SEQRES 5 A 217 SER ALA SER PHE SER THR PHE LYS CYS TYR GLY VAL SER SEQRES 6 A 217 PRO THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR SEQRES 7 A 217 ALA ASP SER PHE VAL ILE ARG GLY ASP GLU VAL ARG GLN SEQRES 8 A 217 ILE ALA PRO GLY GLN THR GLY LYS ILE ALA ASP TYR ASN SEQRES 9 A 217 TYR LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA SEQRES 10 A 217 TRP ASN SER ASN ASN LEU ASP SER LYS VAL GLY GLY ASN SEQRES 11 A 217 TYR ASN TYR LEU TYR ARG LEU PHE ARG LYS SER ASN LEU SEQRES 12 A 217 LYS PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN SEQRES 13 A 217 ALA GLY SER THR PRO CYS ASN GLY VAL GLU GLY PHE ASN SEQRES 14 A 217 CYS TYR PHE PRO LEU GLN SER TYR GLY PHE GLN PRO THR SEQRES 15 A 217 ASN GLY VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SEQRES 16 A 217 SER PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY SEQRES 17 A 217 PRO LYS LYS HIS HIS HIS HIS HIS HIS SEQRES 1 H 222 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 222 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 222 PHE THR VAL ARG SER ASN TYR MET SER TRP VAL ARG GLN SEQRES 4 H 222 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER LEU ILE TYR SEQRES 5 H 222 SER GLY GLY SER THR TYR TYR ALA ASP SER VAL LYS GLY SEQRES 6 H 222 ARG PHE ILE ILE SER ARG ASP ASN SER LYS ASN THR LEU SEQRES 7 H 222 TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR ALA SEQRES 8 H 222 VAL TYR TYR CYS ALA ARG ASP LEU ALA VAL TYR GLY MET SEQRES 9 H 222 ASP VAL TRP GLY GLN GLY THR THR VAL THR VAL SER SER SEQRES 10 H 222 ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SEQRES 11 H 222 SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY SEQRES 12 H 222 CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SEQRES 13 H 222 SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR SEQRES 14 H 222 PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SEQRES 15 H 222 SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR SEQRES 16 H 222 GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN SEQRES 17 H 222 THR LYS VAL ASP LYS ARG VAL GLU PRO LYS SER CYS ASP SEQRES 18 H 222 LYS SEQRES 1 L 215 ASP ILE GLN LEU THR GLN SER PRO SER PHE LEU SER ALA SEQRES 2 L 215 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 215 GLN GLY ILE SER SER TYR LEU ALA TRP TYR GLN GLN LYS SEQRES 4 L 215 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR GLY ALA SER SEQRES 5 L 215 THR LEU GLN SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 215 GLY SER GLY THR GLU PHE LYS LEU THR ILE SER SER LEU SEQRES 7 L 215 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN LEU SEQRES 8 L 215 ASN ASN TYR PRO PRO VAL THR PHE GLY GLN GLY THR ARG SEQRES 9 L 215 LEU GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 L 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 L 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 L 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 L 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 L 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 L 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 L 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 L 215 SER PHE ASN ARG GLY GLU CYS HET NAG A 601 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 4 NAG C8 H15 N O6 FORMUL 5 HOH *336(H2 O) HELIX 1 AA1 PRO A 337 ASN A 343 1 7 HELIX 2 AA2 SER A 349 TRP A 353 5 5 HELIX 3 AA3 TYR A 365 ASN A 370 1 6 HELIX 4 AA4 LYS A 386 ASP A 389 5 4 HELIX 5 AA5 ASP A 405 ILE A 410 5 6 HELIX 6 AA6 GLY A 416 ASN A 422 1 7 HELIX 7 AA7 SER A 438 SER A 443 1 6 HELIX 8 AA8 GLY A 502 TYR A 505 5 4 HELIX 9 AA9 THR H 28 ASN H 32 5 5 HELIX 10 AB1 ASP H 61 LYS H 64 5 4 HELIX 11 AB2 ARG H 86 THR H 90 5 5 HELIX 12 AB3 ALA H 100 TYR H 102 5 3 HELIX 13 AB4 SER H 160 ALA H 162 5 3 HELIX 14 AB5 SER H 191 LEU H 193 5 3 HELIX 15 AB6 LYS H 205 ASN H 208 5 4 HELIX 16 AB7 GLN L 79 PHE L 83 5 5 HELIX 17 AB8 SER L 122 SER L 128 1 7 HELIX 18 AB9 LYS L 184 GLU L 188 1 5 SHEET 1 AA1 5 ASN A 354 ILE A 358 0 SHEET 2 AA1 5 ASN A 394 ARG A 403 -1 O VAL A 395 N ILE A 358 SHEET 3 AA1 5 PRO A 507 GLU A 516 -1 O VAL A 512 N ASP A 398 SHEET 4 AA1 5 GLY A 431 ASN A 437 -1 N ILE A 434 O VAL A 511 SHEET 5 AA1 5 THR A 376 TYR A 380 -1 N LYS A 378 O VAL A 433 SHEET 1 AA2 3 CYS A 361 VAL A 362 0 SHEET 2 AA2 3 VAL A 524 CYS A 525 1 O CYS A 525 N CYS A 361 SHEET 3 AA2 3 CYS A 391 PHE A 392 -1 N PHE A 392 O VAL A 524 SHEET 1 AA3 2 LEU A 452 ARG A 454 0 SHEET 2 AA3 2 LEU A 492 SER A 494 -1 O GLN A 493 N TYR A 453 SHEET 1 AA4 2 TYR A 473 GLN A 474 0 SHEET 2 AA4 2 CYS A 488 TYR A 489 -1 O TYR A 489 N TYR A 473 SHEET 1 AA5 4 GLN H 3 SER H 7 0 SHEET 2 AA5 4 LEU H 18 SER H 25 -1 O SER H 21 N SER H 7 SHEET 3 AA5 4 THR H 77 MET H 82 -1 O MET H 82 N LEU H 18 SHEET 4 AA5 4 PHE H 67 ASP H 72 -1 N ILE H 68 O GLN H 81 SHEET 1 AA6 6 LEU H 11 VAL H 12 0 SHEET 2 AA6 6 THR H 111 VAL H 115 1 O THR H 114 N VAL H 12 SHEET 3 AA6 6 ALA H 91 ASP H 98 -1 N TYR H 93 O THR H 111 SHEET 4 AA6 6 TYR H 33 GLN H 39 -1 N VAL H 37 O TYR H 94 SHEET 5 AA6 6 GLU H 46 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA6 6 THR H 57 TYR H 59 -1 O TYR H 58 N LEU H 50 SHEET 1 AA7 4 LEU H 11 VAL H 12 0 SHEET 2 AA7 4 THR H 111 VAL H 115 1 O THR H 114 N VAL H 12 SHEET 3 AA7 4 ALA H 91 ASP H 98 -1 N TYR H 93 O THR H 111 SHEET 4 AA7 4 MET H 104 TRP H 107 -1 O VAL H 106 N ARG H 97 SHEET 1 AA8 4 SER H 124 LEU H 128 0 SHEET 2 AA8 4 THR H 139 TYR H 149 -1 O LEU H 145 N PHE H 126 SHEET 3 AA8 4 TYR H 180 PRO H 189 -1 O TYR H 180 N TYR H 149 SHEET 4 AA8 4 VAL H 167 THR H 169 -1 N HIS H 168 O VAL H 185 SHEET 1 AA9 4 SER H 124 LEU H 128 0 SHEET 2 AA9 4 THR H 139 TYR H 149 -1 O LEU H 145 N PHE H 126 SHEET 3 AA9 4 TYR H 180 PRO H 189 -1 O TYR H 180 N TYR H 149 SHEET 4 AA9 4 VAL H 173 LEU H 174 -1 N VAL H 173 O SER H 181 SHEET 1 AB1 3 THR H 155 TRP H 158 0 SHEET 2 AB1 3 ILE H 199 HIS H 204 -1 O ASN H 201 N SER H 157 SHEET 3 AB1 3 THR H 209 ARG H 214 -1 O THR H 209 N HIS H 204 SHEET 1 AB2 4 LEU L 4 SER L 7 0 SHEET 2 AB2 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AB2 4 GLU L 70 ILE L 75 -1 O PHE L 71 N CYS L 23 SHEET 4 AB2 4 PHE L 62 SER L 65 -1 N SER L 63 O THR L 74 SHEET 1 AB3 6 PHE L 10 ALA L 13 0 SHEET 2 AB3 6 THR L 103 ILE L 107 1 O GLU L 106 N LEU L 11 SHEET 3 AB3 6 THR L 85 GLN L 90 -1 N TYR L 86 O THR L 103 SHEET 4 AB3 6 LEU L 33 GLN L 38 -1 N GLN L 38 O THR L 85 SHEET 5 AB3 6 LYS L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AB3 6 THR L 53 LEU L 54 -1 O THR L 53 N TYR L 49 SHEET 1 AB4 4 SER L 115 PHE L 119 0 SHEET 2 AB4 4 THR L 130 PHE L 140 -1 O LEU L 136 N PHE L 117 SHEET 3 AB4 4 TYR L 174 SER L 183 -1 O LEU L 180 N VAL L 133 SHEET 4 AB4 4 SER L 160 VAL L 164 -1 N GLN L 161 O THR L 179 SHEET 1 AB5 4 ALA L 154 GLN L 156 0 SHEET 2 AB5 4 LYS L 146 VAL L 151 -1 N TRP L 149 O GLN L 156 SHEET 3 AB5 4 VAL L 192 THR L 198 -1 O GLU L 196 N GLN L 148 SHEET 4 AB5 4 VAL L 206 ASN L 211 -1 O VAL L 206 N VAL L 197 SSBOND 1 CYS A 336 CYS A 361 1555 1555 2.03 SSBOND 2 CYS A 379 CYS A 432 1555 1555 2.04 SSBOND 3 CYS A 391 CYS A 525 1555 1555 2.03 SSBOND 4 CYS A 480 CYS A 488 1555 1555 2.03 SSBOND 5 CYS H 22 CYS H 95 1555 1555 2.03 SSBOND 6 CYS H 144 CYS H 200 1555 1555 2.03 SSBOND 7 CYS L 23 CYS L 88 1555 1555 2.03 SSBOND 8 CYS L 135 CYS L 195 1555 1555 2.03 LINK ND2 ASN A 343 C1 NAG A 601 1555 1555 1.44 CISPEP 1 PHE H 150 PRO H 151 0 -6.57 CISPEP 2 GLU H 152 PRO H 153 0 1.23 CISPEP 3 SER L 7 PRO L 8 0 -1.09 CISPEP 4 TYR L 141 PRO L 142 0 2.86 CRYST1 85.134 149.983 144.790 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011746 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006667 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006907 0.00000