HEADER TRANSPORT PROTEIN 12-JAN-22 7WL6 TITLE CRYSTAL STRUCTURE OF I73L MUTATED HUMAN TRANSTHYRETIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSTHYRETIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ATTR,PREALBUMIN,TBPA; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TTR, PALB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TTR, TRANSTHYRETIN, HUMAN, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.NAKAGAWA,T.OBITA,M.MIZUGUCHI REVDAT 2 29-NOV-23 7WL6 1 REMARK REVDAT 1 23-NOV-22 7WL6 0 JRNL AUTH M.NAKAGAWA,T.OBITA,M.MIZUGUCHI JRNL TITL THE HYDROPHOBIC RESIDUE LEU73 IS CRUCIAL FOR THE HIGH JRNL TITL 2 STABILITY AND LOW AGGREGATION PROPERTIES OF MURINE JRNL TITL 3 TRANSTHYRETIN. JRNL REF BIOCHEM.J. V. 479 1999 2022 JRNL REFN ESSN 1470-8728 JRNL PMID 36098398 JRNL DOI 10.1042/BCJ20220203 REMARK 2 REMARK 2 RESOLUTION. 1.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.343 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 45459 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.939 REMARK 3 FREE R VALUE TEST SET COUNT : 2245 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.6739 - 3.5720 0.95 2769 146 0.1789 0.2050 REMARK 3 2 3.5720 - 2.8356 1.00 2802 134 0.1783 0.2094 REMARK 3 3 2.8356 - 2.4773 1.00 2726 165 0.1855 0.1984 REMARK 3 4 2.4773 - 2.2508 1.00 2743 121 0.1808 0.2110 REMARK 3 5 2.2508 - 2.0895 1.00 2707 142 0.1720 0.2194 REMARK 3 6 2.0895 - 1.9663 1.00 2734 124 0.1785 0.1810 REMARK 3 7 1.9663 - 1.8678 1.00 2698 135 0.1689 0.1957 REMARK 3 8 1.8678 - 1.7865 1.00 2670 144 0.1906 0.2402 REMARK 3 9 1.7865 - 1.7178 1.00 2684 158 0.1910 0.1997 REMARK 3 10 1.7178 - 1.6585 1.00 2701 130 0.1938 0.2145 REMARK 3 11 1.6585 - 1.6066 1.00 2675 139 0.1927 0.2412 REMARK 3 12 1.6066 - 1.5607 1.00 2663 156 0.1992 0.2001 REMARK 3 13 1.5607 - 1.5196 1.00 2660 157 0.2074 0.2359 REMARK 3 14 1.5196 - 1.4825 1.00 2678 120 0.2211 0.2556 REMARK 3 15 1.4825 - 1.4488 1.00 2698 128 0.2292 0.2678 REMARK 3 16 1.4488 - 1.4180 0.98 2606 146 0.2489 0.2522 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.138 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.066 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.44 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1818 REMARK 3 ANGLE : 1.048 2480 REMARK 3 CHIRALITY : 0.041 283 REMARK 3 PLANARITY : 0.007 314 REMARK 3 DIHEDRAL : 12.640 638 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 21 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.3442 7.5065 29.4201 REMARK 3 T TENSOR REMARK 3 T11: 0.1408 T22: 0.1197 REMARK 3 T33: 0.0900 T12: 0.0129 REMARK 3 T13: 0.0101 T23: 0.0147 REMARK 3 L TENSOR REMARK 3 L11: 1.6343 L22: 2.0512 REMARK 3 L33: 1.8768 L12: 1.4026 REMARK 3 L13: 1.0463 L23: 1.4807 REMARK 3 S TENSOR REMARK 3 S11: -0.0711 S12: -0.4760 S13: 0.0527 REMARK 3 S21: 0.1927 S22: -0.0008 S23: 0.0103 REMARK 3 S31: 0.1927 S32: 0.1339 S33: 0.2364 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 19 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.7423 4.3738 26.1059 REMARK 3 T TENSOR REMARK 3 T11: 0.1290 T22: 0.1612 REMARK 3 T33: 0.1761 T12: 0.0052 REMARK 3 T13: -0.0210 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 1.0243 L22: 9.8136 REMARK 3 L33: 8.9734 L12: -2.6924 REMARK 3 L13: -1.5231 L23: 8.2589 REMARK 3 S TENSOR REMARK 3 S11: -0.0413 S12: -0.0313 S13: 0.0845 REMARK 3 S21: 0.0984 S22: 0.1633 S23: -0.5125 REMARK 3 S31: 0.0057 S32: 0.3115 S33: -0.2130 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 29 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.2920 24.6418 24.1416 REMARK 3 T TENSOR REMARK 3 T11: 0.1899 T22: 0.1465 REMARK 3 T33: 0.2398 T12: 0.0063 REMARK 3 T13: -0.0122 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 8.0483 L22: 6.5911 REMARK 3 L33: 2.8603 L12: -5.3392 REMARK 3 L13: -1.2415 L23: 0.3400 REMARK 3 S TENSOR REMARK 3 S11: 0.2368 S12: 0.3957 S13: 0.5564 REMARK 3 S21: -0.3162 S22: -0.1984 S23: 0.1117 REMARK 3 S31: -0.3584 S32: -0.2276 S33: 0.0073 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 41 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.4818 22.6114 28.4236 REMARK 3 T TENSOR REMARK 3 T11: 0.1312 T22: 0.1284 REMARK 3 T33: 0.1766 T12: -0.0164 REMARK 3 T13: 0.0053 T23: -0.0308 REMARK 3 L TENSOR REMARK 3 L11: 6.0863 L22: 3.0300 REMARK 3 L33: 4.1229 L12: -4.1321 REMARK 3 L13: 4.9676 L23: -3.4747 REMARK 3 S TENSOR REMARK 3 S11: -0.3094 S12: -0.1862 S13: 0.3737 REMARK 3 S21: 0.2683 S22: 0.1194 S23: -0.1826 REMARK 3 S31: -0.2758 S32: -0.0135 S33: 0.3917 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 49 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.9278 9.6106 34.4768 REMARK 3 T TENSOR REMARK 3 T11: 0.1785 T22: 0.1637 REMARK 3 T33: 0.1441 T12: 0.0193 REMARK 3 T13: -0.0135 T23: -0.0162 REMARK 3 L TENSOR REMARK 3 L11: 4.0407 L22: 4.9206 REMARK 3 L33: 6.9788 L12: -3.9009 REMARK 3 L13: -4.3233 L23: 2.6127 REMARK 3 S TENSOR REMARK 3 S11: -0.3165 S12: -0.4457 S13: 0.0063 REMARK 3 S21: 0.6205 S22: 0.1838 S23: 0.0533 REMARK 3 S31: 0.4902 S32: 0.2536 S33: 0.1826 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 59 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.5178 19.5747 35.8005 REMARK 3 T TENSOR REMARK 3 T11: 0.1374 T22: 0.2124 REMARK 3 T33: 0.1995 T12: -0.0093 REMARK 3 T13: 0.0299 T23: -0.0527 REMARK 3 L TENSOR REMARK 3 L11: 3.3436 L22: 6.4711 REMARK 3 L33: 8.2004 L12: -4.1822 REMARK 3 L13: 1.1611 L23: 1.5644 REMARK 3 S TENSOR REMARK 3 S11: -0.1451 S12: -0.5206 S13: 0.1222 REMARK 3 S21: 0.2928 S22: -0.0178 S23: 0.0564 REMARK 3 S31: 0.3353 S32: -0.4675 S33: 0.1202 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 67 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.6185 17.9993 23.5769 REMARK 3 T TENSOR REMARK 3 T11: 0.1136 T22: 0.1045 REMARK 3 T33: 0.1309 T12: -0.0101 REMARK 3 T13: 0.0047 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 5.5351 L22: 4.7258 REMARK 3 L33: 2.6894 L12: -5.0658 REMARK 3 L13: -3.0351 L23: 2.3924 REMARK 3 S TENSOR REMARK 3 S11: -0.0342 S12: 0.2488 S13: 0.6780 REMARK 3 S21: 0.0554 S22: 0.0128 S23: -0.2154 REMARK 3 S31: -0.1011 S32: -0.1177 S33: -0.1717 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.7182 11.9662 17.3957 REMARK 3 T TENSOR REMARK 3 T11: 0.1035 T22: 0.2121 REMARK 3 T33: 0.1569 T12: 0.0226 REMARK 3 T13: 0.0359 T23: 0.0370 REMARK 3 L TENSOR REMARK 3 L11: 4.2927 L22: 6.0204 REMARK 3 L33: 5.3927 L12: 1.2856 REMARK 3 L13: 2.3680 L23: -1.6713 REMARK 3 S TENSOR REMARK 3 S11: 0.1264 S12: 0.1151 S13: 0.0451 REMARK 3 S21: -0.1833 S22: -0.4947 S23: -0.3735 REMARK 3 S31: 0.0032 S32: 0.7519 S33: 0.2646 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 91 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.7978 15.3894 21.7066 REMARK 3 T TENSOR REMARK 3 T11: 0.1397 T22: 0.1476 REMARK 3 T33: 0.1389 T12: 0.0078 REMARK 3 T13: 0.0029 T23: -0.0138 REMARK 3 L TENSOR REMARK 3 L11: 3.7098 L22: 4.6145 REMARK 3 L33: 6.9681 L12: -4.1350 REMARK 3 L13: -4.9123 L23: 5.5975 REMARK 3 S TENSOR REMARK 3 S11: -0.1796 S12: -0.1676 S13: 0.2862 REMARK 3 S21: 0.0484 S22: 0.2258 S23: -0.1673 REMARK 3 S31: 0.1273 S32: 0.2828 S33: -0.0782 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 98 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.6642 8.1413 25.1897 REMARK 3 T TENSOR REMARK 3 T11: 0.1154 T22: 0.1074 REMARK 3 T33: 0.1035 T12: -0.0043 REMARK 3 T13: -0.0110 T23: -0.0183 REMARK 3 L TENSOR REMARK 3 L11: 4.4327 L22: 3.0032 REMARK 3 L33: 5.5764 L12: -1.5127 REMARK 3 L13: -3.8461 L23: 1.2574 REMARK 3 S TENSOR REMARK 3 S11: -0.0995 S12: 0.0091 S13: 0.0898 REMARK 3 S21: 0.1538 S22: 0.0064 S23: 0.2504 REMARK 3 S31: 0.1689 S32: -0.1909 S33: 0.1093 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 11 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.5079 7.2491 2.7204 REMARK 3 T TENSOR REMARK 3 T11: 0.1255 T22: 0.1522 REMARK 3 T33: 0.1169 T12: 0.0343 REMARK 3 T13: 0.0102 T23: 0.0307 REMARK 3 L TENSOR REMARK 3 L11: 2.1939 L22: 3.3080 REMARK 3 L33: 7.7309 L12: 1.9815 REMARK 3 L13: -0.2881 L23: -0.2414 REMARK 3 S TENSOR REMARK 3 S11: -0.3645 S12: 0.5563 S13: -0.0441 REMARK 3 S21: -0.4696 S22: 0.2463 S23: -0.1449 REMARK 3 S31: 0.0934 S32: 0.1261 S33: 0.3047 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 19 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.5045 2.5120 5.6795 REMARK 3 T TENSOR REMARK 3 T11: 0.1644 T22: 0.1581 REMARK 3 T33: 0.1513 T12: 0.0089 REMARK 3 T13: -0.0249 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 0.1080 L22: 8.9346 REMARK 3 L33: 3.8509 L12: -0.3861 REMARK 3 L13: 0.2066 L23: -5.8518 REMARK 3 S TENSOR REMARK 3 S11: 0.0619 S12: 0.1574 S13: -0.0214 REMARK 3 S21: -0.2345 S22: 0.0194 S23: 0.2497 REMARK 3 S31: 0.0395 S32: -0.0804 S33: -0.1364 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 29 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.5254 24.8368 8.0511 REMARK 3 T TENSOR REMARK 3 T11: 0.2194 T22: 0.1562 REMARK 3 T33: 0.2784 T12: -0.0109 REMARK 3 T13: 0.0247 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 6.2963 L22: 4.1603 REMARK 3 L33: 7.1339 L12: 5.1067 REMARK 3 L13: 3.0463 L23: 3.3071 REMARK 3 S TENSOR REMARK 3 S11: 0.0470 S12: -0.3462 S13: 0.8583 REMARK 3 S21: -0.0345 S22: -0.1798 S23: 0.3896 REMARK 3 S31: -0.7442 S32: 0.2657 S33: 0.0841 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 41 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.7935 22.3770 3.8798 REMARK 3 T TENSOR REMARK 3 T11: 0.1387 T22: 0.1823 REMARK 3 T33: 0.1766 T12: 0.0245 REMARK 3 T13: 0.0197 T23: 0.0281 REMARK 3 L TENSOR REMARK 3 L11: 6.2238 L22: 5.2123 REMARK 3 L33: 8.7412 L12: 1.9772 REMARK 3 L13: 5.8365 L23: 5.1165 REMARK 3 S TENSOR REMARK 3 S11: -0.2140 S12: -0.2230 S13: 0.5196 REMARK 3 S21: -0.0584 S22: -0.0729 S23: 0.1788 REMARK 3 S31: -0.1955 S32: -0.0234 S33: 0.3543 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 49 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.5327 8.6360 -2.4903 REMARK 3 T TENSOR REMARK 3 T11: 0.2047 T22: 0.2179 REMARK 3 T33: 0.1411 T12: 0.0262 REMARK 3 T13: -0.0177 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 4.8895 L22: 3.1562 REMARK 3 L33: 8.2155 L12: 2.6877 REMARK 3 L13: -5.3795 L23: -3.6876 REMARK 3 S TENSOR REMARK 3 S11: -0.0202 S12: 0.3704 S13: -0.0409 REMARK 3 S21: -0.6477 S22: -0.1486 S23: -0.0489 REMARK 3 S31: 0.4292 S32: 0.0137 S33: 0.2572 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 59 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.5457 20.6081 -3.6732 REMARK 3 T TENSOR REMARK 3 T11: 0.2059 T22: 0.2770 REMARK 3 T33: 0.2387 T12: -0.0117 REMARK 3 T13: 0.0186 T23: 0.0876 REMARK 3 L TENSOR REMARK 3 L11: 4.2528 L22: 3.6818 REMARK 3 L33: 5.2924 L12: 3.9637 REMARK 3 L13: 4.7151 L23: 4.3876 REMARK 3 S TENSOR REMARK 3 S11: -0.3554 S12: 0.7627 S13: 0.5319 REMARK 3 S21: -0.3518 S22: 0.2096 S23: -0.0099 REMARK 3 S31: -0.0580 S32: 0.4554 S33: 0.0100 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 67 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.8526 18.5732 8.2548 REMARK 3 T TENSOR REMARK 3 T11: 0.1523 T22: 0.1195 REMARK 3 T33: 0.1835 T12: 0.0108 REMARK 3 T13: 0.0257 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 2.6847 L22: 2.6452 REMARK 3 L33: 6.7794 L12: 2.4189 REMARK 3 L13: -4.2565 L23: -3.9053 REMARK 3 S TENSOR REMARK 3 S11: 0.1259 S12: -0.0900 S13: 0.4941 REMARK 3 S21: 0.0439 S22: -0.0453 S23: 0.2831 REMARK 3 S31: -0.1513 S32: 0.1784 S33: -0.1393 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 74 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.5671 10.0779 14.2810 REMARK 3 T TENSOR REMARK 3 T11: 0.0978 T22: 0.1337 REMARK 3 T33: 0.1762 T12: 0.0135 REMARK 3 T13: 0.0528 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 4.5062 L22: 5.5419 REMARK 3 L33: 7.1475 L12: 0.2792 REMARK 3 L13: 2.6017 L23: 1.0766 REMARK 3 S TENSOR REMARK 3 S11: 0.0435 S12: -0.0273 S13: 0.0647 REMARK 3 S21: 0.3424 S22: -0.0607 S23: 0.4747 REMARK 3 S31: -0.0296 S32: -0.3430 S33: 0.0424 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 91 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.6386 16.1129 10.3466 REMARK 3 T TENSOR REMARK 3 T11: 0.1387 T22: 0.1947 REMARK 3 T33: 0.1760 T12: -0.0079 REMARK 3 T13: 0.0224 T23: 0.0301 REMARK 3 L TENSOR REMARK 3 L11: 4.0620 L22: 3.8240 REMARK 3 L33: 4.5137 L12: 3.9527 REMARK 3 L13: -4.2728 L23: -4.1818 REMARK 3 S TENSOR REMARK 3 S11: 0.2322 S12: -0.2202 S13: 0.4420 REMARK 3 S21: -0.0335 S22: -0.0038 S23: 0.1236 REMARK 3 S31: 0.0103 S32: -0.2002 S33: -0.2806 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 98 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): 58.6634 13.9945 0.0915 REMARK 3 T TENSOR REMARK 3 T11: 0.4714 T22: 0.4453 REMARK 3 T33: 0.7467 T12: -0.0725 REMARK 3 T13: 0.1749 T23: 0.0912 REMARK 3 L TENSOR REMARK 3 L11: 5.4038 L22: 4.0329 REMARK 3 L33: 7.8278 L12: -1.8831 REMARK 3 L13: -2.8137 L23: 5.6185 REMARK 3 S TENSOR REMARK 3 S11: -1.4081 S12: 0.3367 S13: -1.7663 REMARK 3 S21: -0.6114 S22: 0.2753 S23: -1.3459 REMARK 3 S31: 1.0588 S32: 0.6500 S33: 1.0939 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 104 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.6488 6.5623 8.4274 REMARK 3 T TENSOR REMARK 3 T11: 0.1250 T22: 0.1029 REMARK 3 T33: 0.0778 T12: 0.0176 REMARK 3 T13: -0.0062 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 7.7379 L22: 2.7360 REMARK 3 L33: 3.4248 L12: 0.6380 REMARK 3 L13: -3.2419 L23: -0.6936 REMARK 3 S TENSOR REMARK 3 S11: -0.1118 S12: 0.2026 S13: 0.0316 REMARK 3 S21: -0.2548 S22: 0.0195 S23: -0.1672 REMARK 3 S31: 0.1190 S32: 0.1405 S33: 0.0741 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7WL6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1300026942. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45459 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.418 REMARK 200 RESOLUTION RANGE LOW (A) : 35.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.49 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.47100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4N85 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% PEG400, 0.2 M MAGNESIUM ACETATE, REMARK 280 5% GLYCEROL, 0.1 M TRIS-HCL, PH 7.2, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 21.41990 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.92000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.41990 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.92000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 85.67960 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 361 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 344 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -8 REMARK 465 ALA A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 GLY A 1 REMARK 465 PRO A 2 REMARK 465 THR A 3 REMARK 465 GLY A 4 REMARK 465 THR A 5 REMARK 465 GLY A 6 REMARK 465 GLU A 7 REMARK 465 SER A 8 REMARK 465 LYS A 9 REMARK 465 CYS A 10 REMARK 465 PRO A 125 REMARK 465 LYS A 126 REMARK 465 GLU A 127 REMARK 465 MET B -8 REMARK 465 ALA B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 GLY B 1 REMARK 465 PRO B 2 REMARK 465 THR B 3 REMARK 465 GLY B 4 REMARK 465 THR B 5 REMARK 465 GLY B 6 REMARK 465 GLU B 7 REMARK 465 SER B 8 REMARK 465 LYS B 9 REMARK 465 CYS B 10 REMARK 465 PRO B 125 REMARK 465 LYS B 126 REMARK 465 GLU B 127 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 100 56.01 -145.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 303 O REMARK 620 2 HOH A 310 O 165.3 REMARK 620 3 HOH A 312 O 95.1 73.6 REMARK 620 4 HOH A 318 O 95.7 96.0 169.1 REMARK 620 5 HOH A 356 O 76.4 92.4 81.4 102.6 REMARK 620 6 HOH A 382 O 99.7 89.4 87.8 89.0 168.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 305 O REMARK 620 2 HOH B 311 O 84.2 REMARK 620 3 HOH B 312 O 87.2 170.0 REMARK 620 4 HOH B 319 O 88.5 96.1 78.6 REMARK 620 5 HOH B 324 O 88.3 99.7 85.1 163.5 REMARK 620 6 HOH B 376 O 165.7 84.4 103.2 84.1 102.1 REMARK 620 N 1 2 3 4 5 DBREF 7WL6 A 1 127 UNP P02766 TTHY_HUMAN 21 147 DBREF 7WL6 B 1 127 UNP P02766 TTHY_HUMAN 21 147 SEQADV 7WL6 MET A -8 UNP P02766 INITIATING METHIONINE SEQADV 7WL6 ALA A -7 UNP P02766 EXPRESSION TAG SEQADV 7WL6 HIS A -6 UNP P02766 EXPRESSION TAG SEQADV 7WL6 HIS A -5 UNP P02766 EXPRESSION TAG SEQADV 7WL6 HIS A -4 UNP P02766 EXPRESSION TAG SEQADV 7WL6 HIS A -3 UNP P02766 EXPRESSION TAG SEQADV 7WL6 HIS A -2 UNP P02766 EXPRESSION TAG SEQADV 7WL6 HIS A -1 UNP P02766 EXPRESSION TAG SEQADV 7WL6 MET A 0 UNP P02766 EXPRESSION TAG SEQADV 7WL6 LEU A 73 UNP P02766 ILE 93 ENGINEERED MUTATION SEQADV 7WL6 MET B -8 UNP P02766 INITIATING METHIONINE SEQADV 7WL6 ALA B -7 UNP P02766 EXPRESSION TAG SEQADV 7WL6 HIS B -6 UNP P02766 EXPRESSION TAG SEQADV 7WL6 HIS B -5 UNP P02766 EXPRESSION TAG SEQADV 7WL6 HIS B -4 UNP P02766 EXPRESSION TAG SEQADV 7WL6 HIS B -3 UNP P02766 EXPRESSION TAG SEQADV 7WL6 HIS B -2 UNP P02766 EXPRESSION TAG SEQADV 7WL6 HIS B -1 UNP P02766 EXPRESSION TAG SEQADV 7WL6 MET B 0 UNP P02766 EXPRESSION TAG SEQADV 7WL6 LEU B 73 UNP P02766 ILE 93 ENGINEERED MUTATION SEQRES 1 A 136 MET ALA HIS HIS HIS HIS HIS HIS MET GLY PRO THR GLY SEQRES 2 A 136 THR GLY GLU SER LYS CYS PRO LEU MET VAL LYS VAL LEU SEQRES 3 A 136 ASP ALA VAL ARG GLY SER PRO ALA ILE ASN VAL ALA VAL SEQRES 4 A 136 HIS VAL PHE ARG LYS ALA ALA ASP ASP THR TRP GLU PRO SEQRES 5 A 136 PHE ALA SER GLY LYS THR SER GLU SER GLY GLU LEU HIS SEQRES 6 A 136 GLY LEU THR THR GLU GLU GLU PHE VAL GLU GLY ILE TYR SEQRES 7 A 136 LYS VAL GLU LEU ASP THR LYS SER TYR TRP LYS ALA LEU SEQRES 8 A 136 GLY ILE SER PRO PHE HIS GLU HIS ALA GLU VAL VAL PHE SEQRES 9 A 136 THR ALA ASN ASP SER GLY PRO ARG ARG TYR THR ILE ALA SEQRES 10 A 136 ALA LEU LEU SER PRO TYR SER TYR SER THR THR ALA VAL SEQRES 11 A 136 VAL THR ASN PRO LYS GLU SEQRES 1 B 136 MET ALA HIS HIS HIS HIS HIS HIS MET GLY PRO THR GLY SEQRES 2 B 136 THR GLY GLU SER LYS CYS PRO LEU MET VAL LYS VAL LEU SEQRES 3 B 136 ASP ALA VAL ARG GLY SER PRO ALA ILE ASN VAL ALA VAL SEQRES 4 B 136 HIS VAL PHE ARG LYS ALA ALA ASP ASP THR TRP GLU PRO SEQRES 5 B 136 PHE ALA SER GLY LYS THR SER GLU SER GLY GLU LEU HIS SEQRES 6 B 136 GLY LEU THR THR GLU GLU GLU PHE VAL GLU GLY ILE TYR SEQRES 7 B 136 LYS VAL GLU LEU ASP THR LYS SER TYR TRP LYS ALA LEU SEQRES 8 B 136 GLY ILE SER PRO PHE HIS GLU HIS ALA GLU VAL VAL PHE SEQRES 9 B 136 THR ALA ASN ASP SER GLY PRO ARG ARG TYR THR ILE ALA SEQRES 10 B 136 ALA LEU LEU SER PRO TYR SER TYR SER THR THR ALA VAL SEQRES 11 B 136 VAL THR ASN PRO LYS GLU HET MG A 201 1 HET MG B 201 1 HETNAM MG MAGNESIUM ION FORMUL 3 MG 2(MG 2+) FORMUL 5 HOH *162(H2 O) HELIX 1 AA1 ASP A 74 LEU A 82 1 9 HELIX 2 AA2 ASP B 74 LEU B 82 1 9 SHEET 1 AA1 8 SER A 23 PRO A 24 0 SHEET 2 AA1 8 LEU A 12 ASP A 18 -1 N ASP A 18 O SER A 23 SHEET 3 AA1 8 ARG A 104 SER A 112 1 O ILE A 107 N MET A 13 SHEET 4 AA1 8 SER A 115 THR A 123 -1 O THR A 119 N ALA A 108 SHEET 5 AA1 8 SER B 115 THR B 123 -1 O TYR B 116 N THR A 118 SHEET 6 AA1 8 ARG B 104 SER B 112 -1 N ALA B 108 O THR B 119 SHEET 7 AA1 8 LEU B 12 ASP B 18 1 N MET B 13 O ILE B 107 SHEET 8 AA1 8 SER B 23 PRO B 24 -1 O SER B 23 N ASP B 18 SHEET 1 AA2 8 GLU A 54 LEU A 55 0 SHEET 2 AA2 8 LEU A 12 ASP A 18 -1 N VAL A 14 O LEU A 55 SHEET 3 AA2 8 ARG A 104 SER A 112 1 O ILE A 107 N MET A 13 SHEET 4 AA2 8 SER A 115 THR A 123 -1 O THR A 119 N ALA A 108 SHEET 5 AA2 8 SER B 115 THR B 123 -1 O TYR B 116 N THR A 118 SHEET 6 AA2 8 ARG B 104 SER B 112 -1 N ALA B 108 O THR B 119 SHEET 7 AA2 8 LEU B 12 ASP B 18 1 N MET B 13 O ILE B 107 SHEET 8 AA2 8 GLU B 54 LEU B 55 -1 O LEU B 55 N VAL B 14 SHEET 1 AA3 8 TRP A 41 LYS A 48 0 SHEET 2 AA3 8 ALA A 29 LYS A 35 -1 N VAL A 32 O ALA A 45 SHEET 3 AA3 8 GLY A 67 LEU A 73 -1 O GLU A 72 N HIS A 31 SHEET 4 AA3 8 HIS A 88 ALA A 97 -1 O PHE A 95 N TYR A 69 SHEET 5 AA3 8 HIS B 88 ALA B 97 -1 O GLU B 89 N VAL A 94 SHEET 6 AA3 8 GLY B 67 LEU B 73 -1 N TYR B 69 O PHE B 95 SHEET 7 AA3 8 ALA B 29 LYS B 35 -1 N HIS B 31 O GLU B 72 SHEET 8 AA3 8 TRP B 41 LYS B 48 -1 O ALA B 45 N VAL B 32 LINK MG MG A 201 O HOH A 303 1555 1555 2.05 LINK MG MG A 201 O HOH A 310 1555 4456 1.97 LINK MG MG A 201 O HOH A 312 1555 1555 2.07 LINK MG MG A 201 O HOH A 318 1555 4456 2.10 LINK MG MG A 201 O HOH A 356 1555 1555 2.09 LINK MG MG A 201 O HOH A 382 1555 4456 2.04 LINK MG MG B 201 O HOH B 305 1555 1555 2.05 LINK MG MG B 201 O HOH B 311 1555 1555 2.06 LINK MG MG B 201 O HOH B 312 1555 4555 2.09 LINK MG MG B 201 O HOH B 319 1555 1555 2.05 LINK MG MG B 201 O HOH B 324 1555 4555 2.01 LINK MG MG B 201 O HOH B 376 1555 4555 1.95 CRYST1 42.840 85.840 64.160 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023343 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011650 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015586 0.00000