HEADER GENE REGULATION 25-JAN-22 7WQQ TITLE RETINOIC ACID RECEPTOR ALPHA MUTANT - N299H COMPND MOL_ID: 1; COMPND 2 MOLECULE: RETINOIC ACID RECEPTOR ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RAR-ALPHA,NUCLEAR RECEPTOR SUBFAMILY 1 GROUP B MEMBER 1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PEPTIDE FROM NUCLEAR RECEPTOR COACTIVATOR 1; COMPND 9 CHAIN: C; COMPND 10 EC: 2.3.1.48; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RARA, NR1B1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS NUCLEAR RECEPTOR, RETINOIC ACID, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR X.X.HUANG,L.M.NG,B.T.TEH REVDAT 2 29-NOV-23 7WQQ 1 REMARK REVDAT 1 25-JAN-23 7WQQ 0 JRNL AUTH X.X.HUANG,L.M.NG,B.T.TEH JRNL TITL EFFECTS OF BREAST FIBROEPITHELIAL TUMOR ASSOCIATED RETINOIC JRNL TITL 2 ACID RECEPTOR ALPHA LIGAND BINDING DOMAIN MUTATIONS ON JRNL TITL 3 RECEPTOR FUNCTION AND RETINOID SIGNALING JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20_4459 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.090 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.2 REMARK 3 NUMBER OF REFLECTIONS : 19288 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.530 REMARK 3 FREE R VALUE TEST SET COUNT : 1838 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.5200 - 4.4700 0.97 1484 158 0.1663 0.1897 REMARK 3 2 4.4600 - 3.5400 0.97 1459 154 0.1436 0.1602 REMARK 3 3 3.5400 - 3.1000 0.98 1455 152 0.1689 0.2111 REMARK 3 4 3.1000 - 2.8100 0.98 1458 153 0.1602 0.2567 REMARK 3 5 2.8100 - 2.6100 0.98 1433 152 0.1647 0.2103 REMARK 3 6 2.6100 - 2.4600 0.97 1444 155 0.1538 0.1946 REMARK 3 7 2.4600 - 2.3400 0.96 1420 149 0.1487 0.1878 REMARK 3 8 2.3400 - 2.2300 0.94 1396 147 0.1513 0.2080 REMARK 3 9 2.2300 - 2.1500 0.94 1385 149 0.1698 0.2092 REMARK 3 10 2.1500 - 2.0700 0.90 1335 138 0.1835 0.2482 REMARK 3 11 2.0700 - 2.0100 0.86 1273 139 0.2125 0.2521 REMARK 3 12 2.0100 - 1.9500 0.75 1105 111 0.2538 0.3138 REMARK 3 13 1.9500 - 1.9000 0.55 803 81 0.3038 0.3420 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 181 THROUGH 198 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.7899 16.2575 20.6520 REMARK 3 T TENSOR REMARK 3 T11: 0.4148 T22: 0.3608 REMARK 3 T33: 0.3545 T12: 0.0691 REMARK 3 T13: -0.0416 T23: -0.0779 REMARK 3 L TENSOR REMARK 3 L11: 3.6036 L22: 2.1786 REMARK 3 L33: 2.4868 L12: 1.3024 REMARK 3 L13: 0.3509 L23: -1.2332 REMARK 3 S TENSOR REMARK 3 S11: -0.1607 S12: -0.4131 S13: 0.7176 REMARK 3 S21: 1.0716 S22: 0.1027 S23: -0.3078 REMARK 3 S31: -0.5532 S32: -0.1624 S33: 0.1247 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 199 THROUGH 221 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.4092 -8.9448 14.2089 REMARK 3 T TENSOR REMARK 3 T11: 0.2098 T22: 0.2600 REMARK 3 T33: 0.1989 T12: 0.0147 REMARK 3 T13: 0.0151 T23: -0.0064 REMARK 3 L TENSOR REMARK 3 L11: 2.2747 L22: 1.0030 REMARK 3 L33: 2.8024 L12: 0.2807 REMARK 3 L13: 1.0507 L23: 0.0806 REMARK 3 S TENSOR REMARK 3 S11: -0.0551 S12: 0.0278 S13: -0.1781 REMARK 3 S21: 0.1134 S22: 0.2232 S23: 0.0263 REMARK 3 S31: 0.2619 S32: 0.2398 S33: -0.2334 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 222 THROUGH 245 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.9761 -6.1835 16.2385 REMARK 3 T TENSOR REMARK 3 T11: 0.2083 T22: 0.2410 REMARK 3 T33: 0.1962 T12: -0.0115 REMARK 3 T13: 0.0134 T23: 0.0522 REMARK 3 L TENSOR REMARK 3 L11: 2.6950 L22: 8.6030 REMARK 3 L33: 3.4656 L12: -2.4059 REMARK 3 L13: -1.2936 L23: 2.9464 REMARK 3 S TENSOR REMARK 3 S11: -0.0790 S12: -0.1305 S13: -0.1916 REMARK 3 S21: 0.6344 S22: -0.0639 S23: 0.0882 REMARK 3 S31: 0.2361 S32: -0.1949 S33: 0.1518 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 246 THROUGH 276 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.4486 4.6684 12.2111 REMARK 3 T TENSOR REMARK 3 T11: 0.1982 T22: 0.1815 REMARK 3 T33: 0.1724 T12: 0.0258 REMARK 3 T13: 0.0141 T23: 0.0231 REMARK 3 L TENSOR REMARK 3 L11: 3.8461 L22: 1.4887 REMARK 3 L33: 1.9081 L12: -0.5454 REMARK 3 L13: -0.2217 L23: 0.2530 REMARK 3 S TENSOR REMARK 3 S11: -0.0320 S12: -0.0394 S13: 0.1368 REMARK 3 S21: 0.0108 S22: 0.0312 S23: 0.2615 REMARK 3 S31: -0.1482 S32: -0.1770 S33: 0.0055 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 277 THROUGH 319 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.3790 -4.9363 5.7823 REMARK 3 T TENSOR REMARK 3 T11: 0.1472 T22: 0.2008 REMARK 3 T33: 0.1430 T12: 0.0008 REMARK 3 T13: 0.0131 T23: -0.0193 REMARK 3 L TENSOR REMARK 3 L11: 2.6068 L22: 2.6415 REMARK 3 L33: 1.9524 L12: 0.2973 REMARK 3 L13: -0.1324 L23: -0.4419 REMARK 3 S TENSOR REMARK 3 S11: -0.0025 S12: 0.0466 S13: 0.0613 REMARK 3 S21: 0.0366 S22: 0.0236 S23: -0.0012 REMARK 3 S31: -0.0809 S32: 0.1559 S33: -0.0221 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 320 THROUGH 344 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.8753 10.5065 8.8078 REMARK 3 T TENSOR REMARK 3 T11: 0.2096 T22: 0.1950 REMARK 3 T33: 0.2241 T12: 0.0541 REMARK 3 T13: -0.0127 T23: 0.0319 REMARK 3 L TENSOR REMARK 3 L11: 7.2858 L22: 3.1693 REMARK 3 L33: 2.1941 L12: 0.3294 REMARK 3 L13: 2.1798 L23: 0.3101 REMARK 3 S TENSOR REMARK 3 S11: 0.1854 S12: 0.1679 S13: -0.1533 REMARK 3 S21: 0.0053 S22: -0.0432 S23: -0.1275 REMARK 3 S31: 0.1440 S32: 0.1851 S33: -0.1358 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 345 THROUGH 372 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.0051 20.2179 8.5251 REMARK 3 T TENSOR REMARK 3 T11: 0.3808 T22: 0.2064 REMARK 3 T33: 0.3971 T12: -0.0080 REMARK 3 T13: -0.0345 T23: 0.0182 REMARK 3 L TENSOR REMARK 3 L11: 4.7055 L22: 4.4958 REMARK 3 L33: 2.8538 L12: 0.9705 REMARK 3 L13: 1.0043 L23: 0.0981 REMARK 3 S TENSOR REMARK 3 S11: -0.2361 S12: 0.4150 S13: 0.5808 REMARK 3 S21: -0.2064 S22: 0.1454 S23: -0.4419 REMARK 3 S31: -0.3995 S32: 0.1783 S33: 0.0439 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 373 THROUGH 400 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.6648 1.7178 0.4306 REMARK 3 T TENSOR REMARK 3 T11: 0.2194 T22: 0.2767 REMARK 3 T33: 0.2462 T12: 0.0111 REMARK 3 T13: 0.0036 T23: 0.0242 REMARK 3 L TENSOR REMARK 3 L11: 2.2019 L22: 2.4884 REMARK 3 L33: 1.2786 L12: 1.8793 REMARK 3 L13: 0.4200 L23: 0.9397 REMARK 3 S TENSOR REMARK 3 S11: -0.1319 S12: 0.2536 S13: 0.1279 REMARK 3 S21: -0.3284 S22: 0.2574 S23: -0.0033 REMARK 3 S31: -0.1465 S32: -0.0286 S33: -0.1167 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 401 THROUGH 414 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.5540 -12.3982 10.3742 REMARK 3 T TENSOR REMARK 3 T11: 0.2697 T22: 0.3048 REMARK 3 T33: 0.4008 T12: -0.0204 REMARK 3 T13: 0.0343 T23: 0.1013 REMARK 3 L TENSOR REMARK 3 L11: 1.4723 L22: 5.2766 REMARK 3 L33: 4.8777 L12: 0.4551 REMARK 3 L13: -0.0423 L23: 2.7412 REMARK 3 S TENSOR REMARK 3 S11: 0.0380 S12: -0.2492 S13: -0.4870 REMARK 3 S21: -0.1065 S22: -0.2811 S23: 0.2627 REMARK 3 S31: 0.5027 S32: -0.0866 S33: 0.1882 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 632 THROUGH 640 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.7984 -2.2340 20.0852 REMARK 3 T TENSOR REMARK 3 T11: 0.3083 T22: 0.4708 REMARK 3 T33: 0.5892 T12: 0.0225 REMARK 3 T13: 0.0772 T23: 0.0993 REMARK 3 L TENSOR REMARK 3 L11: 9.5884 L22: 3.4259 REMARK 3 L33: 6.8010 L12: 4.2436 REMARK 3 L13: 2.8544 L23: 3.8251 REMARK 3 S TENSOR REMARK 3 S11: 0.1857 S12: -0.8779 S13: 0.1148 REMARK 3 S21: 0.2644 S22: -0.7103 S23: 1.3794 REMARK 3 S31: 0.4104 S32: -0.3977 S33: 0.5378 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7WQQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1300027087. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : TPS 05A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20866 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.880 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 69.1 REMARK 200 DATA REDUNDANCY IN SHELL : 1.60 REMARK 200 R MERGE FOR SHELL (I) : 0.68300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3KMR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05M BIS-TRIS PROPANE PH 5.0, 0.05M REMARK 280 CITRIC ACID, 18% PEG 3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 44.45750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.48950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 44.45750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 32.48950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 657 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 674 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 710 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 713 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 157 REMARK 465 LYS A 158 REMARK 465 SER A 159 REMARK 465 SER A 160 REMARK 465 HIS A 161 REMARK 465 HIS A 162 REMARK 465 HIS A 163 REMARK 465 HIS A 164 REMARK 465 HIS A 165 REMARK 465 HIS A 166 REMARK 465 GLU A 167 REMARK 465 ASN A 168 REMARK 465 LEU A 169 REMARK 465 TYR A 170 REMARK 465 PHE A 171 REMARK 465 GLN A 172 REMARK 465 SER A 173 REMARK 465 ASN A 174 REMARK 465 ALA A 175 REMARK 465 GLU A 176 REMARK 465 SER A 177 REMARK 465 TYR A 178 REMARK 465 THR A 179 REMARK 465 LEU A 180 REMARK 465 ASN A 211 REMARK 465 ASN A 212 REMARK 465 SER A 213 REMARK 465 SER A 214 REMARK 465 GLU A 215 REMARK 465 GLN A 216 REMARK 465 GLU A 415 REMARK 465 ASN A 416 REMARK 465 SER A 417 REMARK 465 GLU A 418 REMARK 465 GLY A 419 REMARK 465 LEU A 420 REMARK 465 ASP A 421 REMARK 465 ARG C 631 REMARK 465 GLU C 641 REMARK 465 GLY C 642 REMARK 465 SER C 643 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 207 N CA C O CB CG CD REMARK 480 LYS A 207 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 370 79.24 -119.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 741 DISTANCE = 5.83 ANGSTROMS DBREF 7WQQ A 176 421 UNP P10276 RARA_HUMAN 176 421 DBREF 7WQQ C 631 643 UNP Q15788 NCOA1_HUMAN 686 698 SEQADV 7WQQ MET A 157 UNP P10276 INITIATING METHIONINE SEQADV 7WQQ LYS A 158 UNP P10276 EXPRESSION TAG SEQADV 7WQQ SER A 159 UNP P10276 EXPRESSION TAG SEQADV 7WQQ SER A 160 UNP P10276 EXPRESSION TAG SEQADV 7WQQ HIS A 161 UNP P10276 EXPRESSION TAG SEQADV 7WQQ HIS A 162 UNP P10276 EXPRESSION TAG SEQADV 7WQQ HIS A 163 UNP P10276 EXPRESSION TAG SEQADV 7WQQ HIS A 164 UNP P10276 EXPRESSION TAG SEQADV 7WQQ HIS A 165 UNP P10276 EXPRESSION TAG SEQADV 7WQQ HIS A 166 UNP P10276 EXPRESSION TAG SEQADV 7WQQ GLU A 167 UNP P10276 EXPRESSION TAG SEQADV 7WQQ ASN A 168 UNP P10276 EXPRESSION TAG SEQADV 7WQQ LEU A 169 UNP P10276 EXPRESSION TAG SEQADV 7WQQ TYR A 170 UNP P10276 EXPRESSION TAG SEQADV 7WQQ PHE A 171 UNP P10276 EXPRESSION TAG SEQADV 7WQQ GLN A 172 UNP P10276 EXPRESSION TAG SEQADV 7WQQ SER A 173 UNP P10276 EXPRESSION TAG SEQADV 7WQQ ASN A 174 UNP P10276 EXPRESSION TAG SEQADV 7WQQ ALA A 175 UNP P10276 EXPRESSION TAG SEQADV 7WQQ HIS A 299 UNP P10276 ASN 299 ENGINEERED MUTATION SEQRES 1 A 265 MET LYS SER SER HIS HIS HIS HIS HIS HIS GLU ASN LEU SEQRES 2 A 265 TYR PHE GLN SER ASN ALA GLU SER TYR THR LEU THR PRO SEQRES 3 A 265 GLU VAL GLY GLU LEU ILE GLU LYS VAL ARG LYS ALA HIS SEQRES 4 A 265 GLN GLU THR PHE PRO ALA LEU CYS GLN LEU GLY LYS TYR SEQRES 5 A 265 THR THR ASN ASN SER SER GLU GLN ARG VAL SER LEU ASP SEQRES 6 A 265 ILE ASP LEU TRP ASP LYS PHE SER GLU LEU SER THR LYS SEQRES 7 A 265 CYS ILE ILE LYS THR VAL GLU PHE ALA LYS GLN LEU PRO SEQRES 8 A 265 GLY PHE THR THR LEU THR ILE ALA ASP GLN ILE THR LEU SEQRES 9 A 265 LEU LYS ALA ALA CYS LEU ASP ILE LEU ILE LEU ARG ILE SEQRES 10 A 265 CYS THR ARG TYR THR PRO GLU GLN ASP THR MET THR PHE SEQRES 11 A 265 SER ASP GLY LEU THR LEU ASN ARG THR GLN MET HIS HIS SEQRES 12 A 265 ALA GLY PHE GLY PRO LEU THR ASP LEU VAL PHE ALA PHE SEQRES 13 A 265 ALA ASN GLN LEU LEU PRO LEU GLU MET ASP ASP ALA GLU SEQRES 14 A 265 THR GLY LEU LEU SER ALA ILE CYS LEU ILE CYS GLY ASP SEQRES 15 A 265 ARG GLN ASP LEU GLU GLN PRO ASP ARG VAL ASP MET LEU SEQRES 16 A 265 GLN GLU PRO LEU LEU GLU ALA LEU LYS VAL TYR VAL ARG SEQRES 17 A 265 LYS ARG ARG PRO SER ARG PRO HIS MET PHE PRO LYS MET SEQRES 18 A 265 LEU MET LYS ILE THR ASP LEU ARG SER ILE SER ALA LYS SEQRES 19 A 265 GLY ALA GLU ARG VAL ILE THR LEU LYS MET GLU ILE PRO SEQRES 20 A 265 GLY SER MET PRO PRO LEU ILE GLN GLU MET LEU GLU ASN SEQRES 21 A 265 SER GLU GLY LEU ASP SEQRES 1 C 13 ARG HIS LYS ILE LEU HIS ARG LEU LEU GLN GLU GLY SER HET 5Z6 A 501 54 HETNAM 5Z6 4-[(E)-3-(3,5-DITERT-BUTYLPHENYL)-3-OXIDANYLIDENE-PROP- HETNAM 2 5Z6 1-ENYL]BENZOIC ACID FORMUL 3 5Z6 C24 H28 O3 FORMUL 4 HOH *142(H2 O) HELIX 1 AA1 THR A 181 PHE A 199 1 19 HELIX 2 AA2 ALA A 201 LEU A 205 5 5 HELIX 3 AA3 ASP A 221 LEU A 246 1 26 HELIX 4 AA4 GLY A 248 LEU A 252 5 5 HELIX 5 AA5 THR A 253 THR A 275 1 23 HELIX 6 AA6 ARG A 294 GLY A 301 1 8 HELIX 7 AA7 PHE A 302 PRO A 304 5 3 HELIX 8 AA8 LEU A 305 LEU A 317 1 13 HELIX 9 AA9 PRO A 318 GLU A 320 5 3 HELIX 10 AB1 ASP A 322 ILE A 335 1 14 HELIX 11 AB2 GLN A 344 ARG A 367 1 24 HELIX 12 AB3 HIS A 372 ILE A 402 1 31 HELIX 13 AB4 PRO A 407 LEU A 414 1 8 HELIX 14 AB5 LYS C 633 GLN C 640 1 8 SHEET 1 AA1 3 TYR A 277 THR A 278 0 SHEET 2 AA1 3 THR A 283 THR A 285 -1 O THR A 283 N THR A 278 SHEET 3 AA1 3 THR A 291 ASN A 293 -1 O LEU A 292 N MET A 284 CRYST1 88.915 64.979 49.205 90.00 105.23 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011247 0.000000 0.003062 0.00000 SCALE2 0.000000 0.015390 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021063 0.00000 CONECT 3866 3881 3882 3893 CONECT 3867 3883 3884 3894 CONECT 3868 3884 3885 3886 CONECT 3869 3883 3886 3895 CONECT 3870 3871 3880 3896 CONECT 3871 3870 3887 3889 CONECT 3872 3887 3897 3898 3899 CONECT 3873 3887 3900 3901 3902 CONECT 3874 3875 3903 3904 3905 CONECT 3875 3874 3876 3877 3878 CONECT 3876 3875 3906 3907 3908 CONECT 3877 3875 3909 3910 3911 CONECT 3878 3875 3879 3889 CONECT 3879 3878 3880 3912 CONECT 3880 3870 3879 3881 CONECT 3881 3866 3880 3890 CONECT 3882 3866 3883 3913 CONECT 3883 3867 3869 3882 CONECT 3884 3867 3868 3914 CONECT 3885 3868 3891 3892 CONECT 3886 3868 3869 3915 CONECT 3887 3871 3872 3873 3888 CONECT 3888 3887 3916 3917 3918 CONECT 3889 3871 3878 3919 CONECT 3890 3881 CONECT 3891 3885 CONECT 3892 3885 CONECT 3893 3866 CONECT 3894 3867 CONECT 3895 3869 CONECT 3896 3870 CONECT 3897 3872 CONECT 3898 3872 CONECT 3899 3872 CONECT 3900 3873 CONECT 3901 3873 CONECT 3902 3873 CONECT 3903 3874 CONECT 3904 3874 CONECT 3905 3874 CONECT 3906 3876 CONECT 3907 3876 CONECT 3908 3876 CONECT 3909 3877 CONECT 3910 3877 CONECT 3911 3877 CONECT 3912 3879 CONECT 3913 3882 CONECT 3914 3884 CONECT 3915 3886 CONECT 3916 3888 CONECT 3917 3888 CONECT 3918 3888 CONECT 3919 3889 MASTER 454 0 1 14 3 0 0 6 2051 2 54 22 END