HEADER RIBOSOMAL PROTEIN 29-MAR-22 7XDX TITLE CRYSTAL STRUCTURE OF A RECEPTOR LIKE KINASE FROM ARABIDOPSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RECEPTOR-LIKE PROTEIN KINASE FERONIA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PROTEIN SIRENE; COMPND 5 EC: 2.7.11.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: FER, AAK1, SIR, SRN, AT3G51550, F26O13.190; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS RECEPTOR-LIKE KINASE, RIBOSOMAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.Q.KONG,Z.H.MING REVDAT 3 29-NOV-23 7XDX 1 REMARK REVDAT 2 18-OCT-23 7XDX 1 JRNL REVDAT 1 29-MAR-23 7XDX 0 JRNL AUTH Y.KONG,J.CHEN,L.JIANG,H.CHEN,Y.SHEN,L.WANG,Y.YAN,H.ZHOU, JRNL AUTH 2 H.ZHENG,F.YU,Z.MING JRNL TITL STRUCTURAL AND BIOCHEMICAL BASIS OF ARABIDOPSIS FERONIA JRNL TITL 2 RECEPTOR KINASE-MEDIATED EARLY SIGNALING INITIATION. JRNL REF PLANT COMMUN. V. 4 00559 2023 JRNL REFN ISSN 2590-3462 JRNL PMID 36774537 JRNL DOI 10.1016/J.XPLC.2023.100559 REMARK 2 REMARK 2 RESOLUTION. 2.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15_3459 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 61.57 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 3 NUMBER OF REFLECTIONS : 28857 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.570 REMARK 3 FREE R VALUE TEST SET COUNT : 1895 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 61.5680 - 5.3736 0.98 2048 142 0.1790 0.1948 REMARK 3 2 5.3736 - 4.2655 0.99 2021 151 0.1505 0.1976 REMARK 3 3 4.2655 - 3.7264 0.99 2022 144 0.1511 0.1824 REMARK 3 4 3.7264 - 3.3857 0.99 2017 148 0.1640 0.2249 REMARK 3 5 3.3857 - 3.1431 0.99 1997 139 0.1723 0.2451 REMARK 3 6 3.1431 - 2.9578 0.98 1998 134 0.1813 0.2672 REMARK 3 7 2.9578 - 2.8096 0.97 1972 134 0.1857 0.2466 REMARK 3 8 2.8096 - 2.6873 0.97 1968 140 0.1803 0.2199 REMARK 3 9 2.6873 - 2.5839 0.94 1892 145 0.1814 0.2586 REMARK 3 10 2.5839 - 2.4947 0.94 1934 129 0.2029 0.2751 REMARK 3 11 2.4947 - 2.4167 0.88 1796 118 0.2105 0.2986 REMARK 3 12 2.4167 - 2.3476 0.81 1627 121 0.2816 0.3773 REMARK 3 13 2.3476 - 2.2858 0.92 1855 131 0.2204 0.2514 REMARK 3 14 2.2858 - 2.2300 0.89 1815 119 0.2610 0.3632 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 13.5549 5.2665 16.6325 REMARK 3 T TENSOR REMARK 3 T11: 0.1419 T22: 0.1218 REMARK 3 T33: 0.1057 T12: 0.0168 REMARK 3 T13: -0.0015 T23: -0.0057 REMARK 3 L TENSOR REMARK 3 L11: 1.5864 L22: 1.0118 REMARK 3 L33: 0.3618 L12: 0.6149 REMARK 3 L13: -0.0732 L23: -0.0645 REMARK 3 S TENSOR REMARK 3 S11: -0.0719 S12: 0.2030 S13: 0.0015 REMARK 3 S21: -0.1542 S22: 0.0766 S23: -0.0115 REMARK 3 S31: 0.0069 S32: -0.0249 S33: -0.0102 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 1718 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7XDX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-APR-22. REMARK 100 THE DEPOSITION ID IS D_1300028001. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUL-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979183 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30350 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.230 REMARK 200 RESOLUTION RANGE LOW (A) : 82.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2QKW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS PH 8.0, 30% V/V POLYETHYLENE REMARK 280 GLYCOL 400, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.47500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13720 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 504 REMARK 465 GLY A 505 REMARK 465 SER A 506 REMARK 465 SER A 507 REMARK 465 HIS A 508 REMARK 465 HIS A 509 REMARK 465 HIS A 510 REMARK 465 HIS A 511 REMARK 465 HIS A 512 REMARK 465 HIS A 513 REMARK 465 SER A 514 REMARK 465 GLN A 515 REMARK 465 GLY A 516 REMARK 465 SER A 517 REMARK 465 SER A 518 REMARK 465 ASN A 519 REMARK 465 LEU A 520 REMARK 465 GLY A 686 REMARK 465 PRO A 687 REMARK 465 THR A 688 REMARK 465 LEU A 689 REMARK 465 ASP A 690 REMARK 465 HIS A 691 REMARK 465 THR A 692 REMARK 465 HIS A 693 REMARK 465 VAL A 694 REMARK 465 SER A 695 REMARK 465 THR A 696 REMARK 465 VAL A 697 REMARK 465 VAL A 698 REMARK 465 LYS A 699 REMARK 465 GLY A 700 REMARK 465 SER A 816 REMARK 465 MET B 504 REMARK 465 GLY B 505 REMARK 465 SER B 506 REMARK 465 SER B 507 REMARK 465 HIS B 508 REMARK 465 HIS B 509 REMARK 465 HIS B 510 REMARK 465 HIS B 511 REMARK 465 HIS B 512 REMARK 465 HIS B 513 REMARK 465 SER B 514 REMARK 465 GLN B 515 REMARK 465 GLY B 516 REMARK 465 SER B 517 REMARK 465 SER B 518 REMARK 465 ASN B 519 REMARK 465 LEU B 520 REMARK 465 GLY B 686 REMARK 465 PRO B 687 REMARK 465 THR B 688 REMARK 465 LEU B 689 REMARK 465 ASP B 690 REMARK 465 HIS B 691 REMARK 465 THR B 692 REMARK 465 HIS B 693 REMARK 465 VAL B 694 REMARK 465 SER B 695 REMARK 465 THR B 696 REMARK 465 VAL B 697 REMARK 465 VAL B 698 REMARK 465 LYS B 699 REMARK 465 GLY B 700 REMARK 465 SER B 816 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O VAL B 766 NZ LYS B 771 1.59 REMARK 500 OD2 ASP B 767 O HOH B 1001 1.91 REMARK 500 NE2 GLN A 714 O HOH A 1001 1.92 REMARK 500 O HOH A 1094 O HOH A 1096 2.02 REMARK 500 OH TYR A 769 O HOH A 1002 2.06 REMARK 500 O PHE A 702 O HOH A 1003 2.08 REMARK 500 OE2 GLU B 708 O HOH B 1002 2.09 REMARK 500 O HOH A 1067 O HOH A 1085 2.10 REMARK 500 O LYS A 759 O HOH A 1004 2.11 REMARK 500 O CYS B 521 O HOH B 1003 2.14 REMARK 500 NZ LYS A 788 O HOH A 1005 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU B 602 NZ LYS B 780 1554 1.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS B 590 NE2 HIS B 590 CD2 -0.067 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 715 CA - CB - CG ANGL. DEV. = 25.1 DEGREES REMARK 500 PHE B 710 CB - CA - C ANGL. DEV. = 14.1 DEGREES REMARK 500 ARG B 711 N - CA - CB ANGL. DEV. = -12.2 DEGREES REMARK 500 ARG B 712 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 661 47.67 -146.35 REMARK 500 ASP A 679 77.46 67.64 REMARK 500 ASP A 706 109.43 -59.20 REMARK 500 ARG A 711 -59.85 -137.70 REMARK 500 ASN B 603 -136.50 60.19 REMARK 500 CYS B 604 60.68 -118.11 REMARK 500 ASP B 661 47.60 -145.06 REMARK 500 ASP B 679 79.87 63.70 REMARK 500 PRO B 740 1.51 -69.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1096 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH B1079 DISTANCE = 6.25 ANGSTROMS DBREF 7XDX A 518 816 UNP Q9SCZ4 FERON_ARATH 518 816 DBREF 7XDX B 518 816 UNP Q9SCZ4 FERON_ARATH 518 816 SEQADV 7XDX MET A 504 UNP Q9SCZ4 INITIATING METHIONINE SEQADV 7XDX GLY A 505 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX SER A 506 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX SER A 507 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX HIS A 508 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX HIS A 509 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX HIS A 510 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX HIS A 511 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX HIS A 512 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX HIS A 513 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX SER A 514 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX GLN A 515 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX GLY A 516 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX SER A 517 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX ALA A 525 UNP Q9SCZ4 SER 525 CONFLICT SEQADV 7XDX MET B 504 UNP Q9SCZ4 INITIATING METHIONINE SEQADV 7XDX GLY B 505 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX SER B 506 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX SER B 507 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX HIS B 508 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX HIS B 509 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX HIS B 510 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX HIS B 511 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX HIS B 512 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX HIS B 513 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX SER B 514 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX GLN B 515 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX GLY B 516 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX SER B 517 UNP Q9SCZ4 EXPRESSION TAG SEQADV 7XDX ALA B 525 UNP Q9SCZ4 SER 525 CONFLICT SEQRES 1 A 313 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN GLY SEQRES 2 A 313 SER SER ASN LEU CYS ARG HIS PHE ALA PHE ALA GLU ILE SEQRES 3 A 313 LYS ALA ALA THR LYS ASN PHE ASP GLU SER ARG VAL LEU SEQRES 4 A 313 GLY VAL GLY GLY PHE GLY LYS VAL TYR ARG GLY GLU ILE SEQRES 5 A 313 ASP GLY GLY THR THR LYS VAL ALA ILE LYS ARG GLY ASN SEQRES 6 A 313 PRO MET SER GLU GLN GLY VAL HIS GLU PHE GLN THR GLU SEQRES 7 A 313 ILE GLU MET LEU SER LYS LEU ARG HIS ARG HIS LEU VAL SEQRES 8 A 313 SER LEU ILE GLY TYR CYS GLU GLU ASN CYS GLU MET ILE SEQRES 9 A 313 LEU VAL TYR ASP TYR MET ALA HIS GLY THR MET ARG GLU SEQRES 10 A 313 HIS LEU TYR LYS THR GLN ASN PRO SER LEU PRO TRP LYS SEQRES 11 A 313 GLN ARG LEU GLU ILE CYS ILE GLY ALA ALA ARG GLY LEU SEQRES 12 A 313 HIS TYR LEU HIS THR GLY ALA LYS HIS THR ILE ILE HIS SEQRES 13 A 313 ARG ASP VAL LYS THR THR ASN ILE LEU LEU ASP GLU LYS SEQRES 14 A 313 TRP VAL ALA LYS VAL SER ASP PHE GLY LEU SER LYS THR SEQRES 15 A 313 GLY PRO THR LEU ASP HIS THR HIS VAL SER THR VAL VAL SEQRES 16 A 313 LYS GLY SER PHE GLY TYR LEU ASP PRO GLU TYR PHE ARG SEQRES 17 A 313 ARG GLN GLN LEU THR GLU LYS SER ASP VAL TYR SER PHE SEQRES 18 A 313 GLY VAL VAL LEU PHE GLU ALA LEU CYS ALA ARG PRO ALA SEQRES 19 A 313 LEU ASN PRO THR LEU ALA LYS GLU GLN VAL SER LEU ALA SEQRES 20 A 313 GLU TRP ALA PRO TYR CYS TYR LYS LYS GLY MET LEU ASP SEQRES 21 A 313 GLN ILE VAL ASP PRO TYR LEU LYS GLY LYS ILE THR PRO SEQRES 22 A 313 GLU CYS PHE LYS LYS PHE ALA GLU THR ALA MET LYS CYS SEQRES 23 A 313 VAL LEU ASP GLN GLY ILE GLU ARG PRO SER MET GLY ASP SEQRES 24 A 313 VAL LEU TRP ASN LEU GLU PHE ALA LEU GLN LEU GLN GLU SEQRES 25 A 313 SER SEQRES 1 B 313 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN GLY SEQRES 2 B 313 SER SER ASN LEU CYS ARG HIS PHE ALA PHE ALA GLU ILE SEQRES 3 B 313 LYS ALA ALA THR LYS ASN PHE ASP GLU SER ARG VAL LEU SEQRES 4 B 313 GLY VAL GLY GLY PHE GLY LYS VAL TYR ARG GLY GLU ILE SEQRES 5 B 313 ASP GLY GLY THR THR LYS VAL ALA ILE LYS ARG GLY ASN SEQRES 6 B 313 PRO MET SER GLU GLN GLY VAL HIS GLU PHE GLN THR GLU SEQRES 7 B 313 ILE GLU MET LEU SER LYS LEU ARG HIS ARG HIS LEU VAL SEQRES 8 B 313 SER LEU ILE GLY TYR CYS GLU GLU ASN CYS GLU MET ILE SEQRES 9 B 313 LEU VAL TYR ASP TYR MET ALA HIS GLY THR MET ARG GLU SEQRES 10 B 313 HIS LEU TYR LYS THR GLN ASN PRO SER LEU PRO TRP LYS SEQRES 11 B 313 GLN ARG LEU GLU ILE CYS ILE GLY ALA ALA ARG GLY LEU SEQRES 12 B 313 HIS TYR LEU HIS THR GLY ALA LYS HIS THR ILE ILE HIS SEQRES 13 B 313 ARG ASP VAL LYS THR THR ASN ILE LEU LEU ASP GLU LYS SEQRES 14 B 313 TRP VAL ALA LYS VAL SER ASP PHE GLY LEU SER LYS THR SEQRES 15 B 313 GLY PRO THR LEU ASP HIS THR HIS VAL SER THR VAL VAL SEQRES 16 B 313 LYS GLY SER PHE GLY TYR LEU ASP PRO GLU TYR PHE ARG SEQRES 17 B 313 ARG GLN GLN LEU THR GLU LYS SER ASP VAL TYR SER PHE SEQRES 18 B 313 GLY VAL VAL LEU PHE GLU ALA LEU CYS ALA ARG PRO ALA SEQRES 19 B 313 LEU ASN PRO THR LEU ALA LYS GLU GLN VAL SER LEU ALA SEQRES 20 B 313 GLU TRP ALA PRO TYR CYS TYR LYS LYS GLY MET LEU ASP SEQRES 21 B 313 GLN ILE VAL ASP PRO TYR LEU LYS GLY LYS ILE THR PRO SEQRES 22 B 313 GLU CYS PHE LYS LYS PHE ALA GLU THR ALA MET LYS CYS SEQRES 23 B 313 VAL LEU ASP GLN GLY ILE GLU ARG PRO SER MET GLY ASP SEQRES 24 B 313 VAL LEU TRP ASN LEU GLU PHE ALA LEU GLN LEU GLN GLU SEQRES 25 B 313 SER HET ADP A 901 27 HET ADP B 901 27 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE FORMUL 3 ADP 2(C10 H15 N5 O10 P2) FORMUL 5 HOH *175(H2 O) HELIX 1 AA1 ALA A 525 THR A 533 1 9 HELIX 2 AA2 ASP A 537 SER A 539 5 3 HELIX 3 AA3 SER A 571 SER A 586 1 16 HELIX 4 AA4 MET A 618 LEU A 622 5 5 HELIX 5 AA5 PRO A 631 GLY A 652 1 22 HELIX 6 AA6 GLU A 708 GLN A 713 1 6 HELIX 7 AA7 GLU A 717 ALA A 734 1 18 HELIX 8 AA8 ALA A 743 VAL A 747 5 5 HELIX 9 AA9 SER A 748 LYS A 759 1 12 HELIX 10 AB1 MET A 761 VAL A 766 5 6 HELIX 11 AB2 ASP A 767 LYS A 771 5 5 HELIX 12 AB3 THR A 775 VAL A 790 1 16 HELIX 13 AB4 GLN A 793 ARG A 797 5 5 HELIX 14 AB5 SER A 799 GLU A 815 1 17 HELIX 15 AB6 ALA B 525 THR B 533 1 9 HELIX 16 AB7 ASP B 537 SER B 539 5 3 HELIX 17 AB8 SER B 571 SER B 586 1 16 HELIX 18 AB9 MET B 618 LEU B 622 5 5 HELIX 19 AC1 PRO B 631 GLY B 652 1 22 HELIX 20 AC2 ASP B 706 GLN B 713 1 8 HELIX 21 AC3 GLU B 717 ALA B 734 1 18 HELIX 22 AC4 ALA B 743 VAL B 747 5 5 HELIX 23 AC5 SER B 748 LYS B 759 1 12 HELIX 24 AC6 MET B 761 ILE B 765 5 5 HELIX 25 AC7 ASP B 767 LYS B 771 5 5 HELIX 26 AC8 THR B 775 VAL B 790 1 16 HELIX 27 AC9 GLN B 793 ARG B 797 5 5 HELIX 28 AD1 SER B 799 GLU B 815 1 17 SHEET 1 AA1 6 ARG A 522 HIS A 523 0 SHEET 2 AA1 6 LEU A 596 CYS A 600 1 O TYR A 599 N ARG A 522 SHEET 3 AA1 6 MET A 606 ASP A 611 -1 O VAL A 609 N ILE A 597 SHEET 4 AA1 6 THR A 560 GLY A 567 -1 N GLY A 567 O MET A 606 SHEET 5 AA1 6 GLY A 548 ILE A 555 -1 N GLY A 553 O VAL A 562 SHEET 6 AA1 6 VAL A 541 GLY A 545 -1 N LEU A 542 O VAL A 550 SHEET 1 AA2 2 ILE A 667 LEU A 669 0 SHEET 2 AA2 2 ALA A 675 VAL A 677 -1 O LYS A 676 N LEU A 668 SHEET 1 AA3 6 ARG B 522 HIS B 523 0 SHEET 2 AA3 6 LEU B 596 CYS B 600 1 O TYR B 599 N ARG B 522 SHEET 3 AA3 6 ILE B 607 ASP B 611 -1 O ILE B 607 N CYS B 600 SHEET 4 AA3 6 THR B 560 ARG B 566 -1 N ALA B 563 O TYR B 610 SHEET 5 AA3 6 GLY B 548 ILE B 555 -1 N GLY B 553 O VAL B 562 SHEET 6 AA3 6 VAL B 541 GLY B 545 -1 N LEU B 542 O VAL B 550 SHEET 1 AA4 2 ILE B 667 LEU B 669 0 SHEET 2 AA4 2 ALA B 675 VAL B 677 -1 O LYS B 676 N LEU B 668 CRYST1 61.670 82.950 61.940 90.00 93.30 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016215 0.000000 0.000934 0.00000 SCALE2 0.000000 0.012055 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016171 0.00000