HEADER VIRAL PROTEIN/IMMUNE SYSTEM 13-MAY-22 7XS8 TITLE CRYSTAL STRUCTURE OF SARS-COV-2 SPIKE RECEPTOR BINDING DOMAIN BOUND TITLE 2 WITH P5S-1H1 FAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: P5S-1H1 HEAVY CHAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: SPIKE PROTEIN S1; COMPND 7 CHAIN: E; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: P5S-1H1 LIGHT CHAIN; COMPND 11 CHAIN: L; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 8 2; SOURCE 9 ORGANISM_COMMON: 2019-NCOV,SARS-COV-2; SOURCE 10 ORGANISM_TAXID: 2697049; SOURCE 11 GENE: S, 2; SOURCE 12 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 14 MOL_ID: 3; SOURCE 15 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 16 ORGANISM_TAXID: 9606; SOURCE 17 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS SARS-COV-2, ANTIBODY, VIRAL PROTEIN-IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR X.WANG,Z.WANG REVDAT 2 29-NOV-23 7XS8 1 REMARK REVDAT 1 26-APR-23 7XS8 0 JRNL AUTH B.JU,Q.ZHANG,Z.WANG,Z.Q.AW,P.CHEN,B.ZHOU,R.WANG,X.GE,Q.LV, JRNL AUTH 2 L.CHENG,R.ZHANG,Y.H.WONG,H.CHEN,H.WANG,S.SHAN,X.LIAO,X.SHI, JRNL AUTH 3 L.LIU,J.J.H.CHU,X.WANG,Z.ZHANG,L.ZHANG JRNL TITL INFECTION WITH WILD-TYPE SARS-COV-2 ELICITS BROADLY JRNL TITL 2 NEUTRALIZING AND PROTECTIVE ANTIBODIES AGAINST OMICRON JRNL TITL 3 SUBVARIANTS. JRNL REF NAT.IMMUNOL. V. 24 690 2023 JRNL REFN ESSN 1529-2916 JRNL PMID 36914890 JRNL DOI 10.1038/S41590-023-01449-6 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 22589 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1106 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.0000 - 5.6000 0.98 2728 147 0.2070 0.2633 REMARK 3 2 5.6000 - 4.4400 1.00 2724 142 0.1711 0.2190 REMARK 3 3 4.4400 - 3.8800 0.98 2698 131 0.1931 0.2093 REMARK 3 4 3.8800 - 3.5300 0.99 2682 136 0.2162 0.2950 REMARK 3 5 3.5300 - 3.2700 1.00 2722 141 0.2324 0.2848 REMARK 3 6 3.2700 - 3.0800 0.99 2663 138 0.2687 0.3374 REMARK 3 7 3.0800 - 2.9300 0.98 2679 129 0.2744 0.3179 REMARK 3 8 2.9300 - 2.8000 0.97 2587 142 0.2973 0.3521 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7XS8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1300029486. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-SEP-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL18U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22719 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.23100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.95800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6M0J REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2% V/V TACSIMATE PH 5.0, 0.1M SODIUM REMARK 280 CITRATE TRIBASIC DIHYDRATE PH 5.4, 13% W/V POLYETHYLENE GLYCOL REMARK 280 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 97.55350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.19950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 97.55350 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 43.19950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5740 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 132 REMARK 465 LYS A 133 REMARK 465 SER A 134 REMARK 465 THR A 135 REMARK 465 SER A 136 REMARK 465 GLY A 137 REMARK 465 LYS E 386 REMARK 465 LEU E 387 REMARK 465 ASN E 388 REMARK 465 ASP E 389 REMARK 465 LEU E 517 REMARK 465 LEU E 518 REMARK 465 HIS E 519 REMARK 465 ALA E 520 REMARK 465 PRO E 521 REMARK 465 ALA E 522 REMARK 465 GLY L 41 REMARK 465 TYR L 138 REMARK 465 PRO L 139 REMARK 465 LEU L 152 REMARK 465 CYS L 212 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG1 THR A 139 OG1 THR A 139 2556 2.06 REMARK 500 O SER A 207 NH2 ARG L 18 1556 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 99 N - CA - C ANGL. DEV. = -17.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 48 -54.56 -122.87 REMARK 500 PRO A 130 -179.35 -65.39 REMARK 500 ALA E 352 68.20 -119.87 REMARK 500 ASN E 422 -62.36 -127.22 REMARK 500 SER L 30 -125.77 55.59 REMARK 500 ALA L 43 120.54 115.33 REMARK 500 ALA L 51 -45.23 67.87 REMARK 500 ALA L 84 -161.69 -174.66 REMARK 500 REMARK 500 REMARK: NULL DBREF 7XS8 A 2 217 PDB 7XS8 7XS8 2 217 DBREF 7XS8 E 334 527 UNP P0DTC2 SPIKE_SARS2 334 527 DBREF 7XS8 L 2 212 PDB 7XS8 7XS8 2 212 SEQRES 1 A 216 VAL GLN LEU VAL GLU SER GLY GLY GLY LEU ILE GLN PRO SEQRES 2 A 216 GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY ILE SEQRES 3 A 216 THR VAL SER SER ASN TYR MET THR TRP VAL ARG GLN PRO SEQRES 4 A 216 PRO GLY LYS GLY LEU GLU TRP VAL SER VAL ILE TYR SER SEQRES 5 A 216 GLY GLY SER THR PHE TYR ALA ASP PRO VAL LYS GLY ARG SEQRES 6 A 216 PHE THR ILE SER ARG ASP ASN SER ARG ASN THR LEU TYR SEQRES 7 A 216 LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR ALA VAL SEQRES 8 A 216 TYR TYR CYS ALA ARG ASP LEU GLN VAL TYR GLY MET ASP SEQRES 9 A 216 VAL TRP GLY GLN GLY THR THR VAL THR VAL SER SER ALA SEQRES 10 A 216 SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SEQRES 11 A 216 SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY CYS SEQRES 12 A 216 LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER SEQRES 13 A 216 TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR PHE SEQRES 14 A 216 PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SEQRES 15 A 216 SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR GLN SEQRES 16 A 216 THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR SEQRES 17 A 216 LYS VAL ASP LYS LYS VAL GLU PRO SEQRES 1 E 194 ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA THR ARG SEQRES 2 E 194 PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG ILE SER SEQRES 3 E 194 ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SER ALA SEQRES 4 E 194 SER PHE SER THR PHE LYS CYS TYR GLY VAL SER PRO THR SEQRES 5 E 194 LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR ALA ASP SEQRES 6 E 194 SER PHE VAL ILE ARG GLY ASP GLU VAL ARG GLN ILE ALA SEQRES 7 E 194 PRO GLY GLN THR GLY LYS ILE ALA ASP TYR ASN TYR LYS SEQRES 8 E 194 LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA TRP ASN SEQRES 9 E 194 SER ASN ASN LEU ASP SER LYS VAL GLY GLY ASN TYR ASN SEQRES 10 E 194 TYR LEU TYR ARG LEU PHE ARG LYS SER ASN LEU LYS PRO SEQRES 11 E 194 PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN ALA GLY SEQRES 12 E 194 SER THR PRO CYS ASN GLY VAL GLU GLY PHE ASN CYS TYR SEQRES 13 E 194 PHE PRO LEU GLN SER TYR GLY PHE GLN PRO THR ASN GLY SEQRES 14 E 194 VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SER PHE SEQRES 15 E 194 GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY PRO SEQRES 1 L 212 ILE GLN LEU THR GLN SER PRO SER PHE LEU SER ALA SER SEQRES 2 L 212 VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER GLN SEQRES 3 L 212 GLY ILE SER ASN PHE LEU ALA TRP TYR GLN GLN LYS PRO SEQRES 4 L 212 GLY LYS ALA PRO LYS LEU LEU ILE TYR ALA ALA SER THR SEQRES 5 L 212 LEU GLN GLY GLY VAL PRO SER THR PHE SER GLY SER GLY SEQRES 6 L 212 SER GLY THR GLU PHE THR LEU THR ILE SER SER LEU GLN SEQRES 7 L 212 PRO GLU ASP PHE ALA THR TYR TYR CYS GLN HIS LEU ASN SEQRES 8 L 212 ASP TYR PRO LEU PHE GLY GLY GLY THR ARG VAL GLU ILE SEQRES 9 L 212 LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE PHE PRO SEQRES 10 L 212 PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SER VAL SEQRES 11 L 212 VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA LYS SEQRES 12 L 212 VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER GLY ASN SEQRES 13 L 212 SER GLN GLU SER VAL THR GLU GLN ASP SER LYS ASP SER SEQRES 14 L 212 THR TYR SER LEU SER SER THR LEU THR LEU SER LYS ALA SEQRES 15 L 212 ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL THR SEQRES 16 L 212 HIS GLN GLY LEU SER SER PRO VAL THR LYS SER PHE ASN SEQRES 17 L 212 ARG GLY GLU CYS HET NAG E 601 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 4 NAG C8 H15 N O6 HELIX 1 AA1 ASP A 61 LYS A 64 5 4 HELIX 2 AA2 ARG A 86 THR A 90 5 5 HELIX 3 AA3 SER A 160 ALA A 162 5 3 HELIX 4 AA4 SER A 191 THR A 195 5 5 HELIX 5 AA5 LYS A 205 ASN A 208 5 4 HELIX 6 AA6 PRO E 337 ASN E 343 1 7 HELIX 7 AA7 SER E 349 TRP E 353 5 5 HELIX 8 AA8 TYR E 365 ASN E 370 1 6 HELIX 9 AA9 ASP E 405 ILE E 410 5 6 HELIX 10 AB1 GLY E 416 ASN E 422 1 7 HELIX 11 AB2 SER E 438 SER E 443 1 6 HELIX 12 AB3 GLY E 502 TYR E 505 5 4 HELIX 13 AB4 GLN L 79 PHE L 83 5 5 HELIX 14 AB5 SER L 119 GLY L 126 1 8 HELIX 15 AB6 LYS L 181 GLU L 185 1 5 SHEET 1 AA1 4 GLN A 3 SER A 7 0 SHEET 2 AA1 4 LEU A 18 SER A 25 -1 O ALA A 23 N VAL A 5 SHEET 3 AA1 4 THR A 77 MET A 82 -1 O MET A 82 N LEU A 18 SHEET 4 AA1 4 PHE A 67 ASP A 72 -1 N SER A 70 O TYR A 79 SHEET 1 AA2 6 LEU A 11 ILE A 12 0 SHEET 2 AA2 6 THR A 111 VAL A 115 1 O THR A 114 N ILE A 12 SHEET 3 AA2 6 ALA A 91 LEU A 99 -1 N TYR A 93 O THR A 111 SHEET 4 AA2 6 MET A 34 GLN A 39 -1 N VAL A 37 O TYR A 94 SHEET 5 AA2 6 GLU A 46 ILE A 51 -1 O GLU A 46 N ARG A 38 SHEET 6 AA2 6 THR A 57 TYR A 59 -1 O PHE A 58 N VAL A 50 SHEET 1 AA3 4 LEU A 11 ILE A 12 0 SHEET 2 AA3 4 THR A 111 VAL A 115 1 O THR A 114 N ILE A 12 SHEET 3 AA3 4 ALA A 91 LEU A 99 -1 N TYR A 93 O THR A 111 SHEET 4 AA3 4 GLY A 103 TRP A 107 -1 O GLY A 103 N LEU A 99 SHEET 1 AA4 4 SER A 124 LEU A 128 0 SHEET 2 AA4 4 THR A 139 TYR A 149 -1 O GLY A 143 N LEU A 128 SHEET 3 AA4 4 TYR A 180 PRO A 189 -1 O TYR A 180 N TYR A 149 SHEET 4 AA4 4 VAL A 167 THR A 169 -1 N HIS A 168 O VAL A 185 SHEET 1 AA5 4 SER A 124 LEU A 128 0 SHEET 2 AA5 4 THR A 139 TYR A 149 -1 O GLY A 143 N LEU A 128 SHEET 3 AA5 4 TYR A 180 PRO A 189 -1 O TYR A 180 N TYR A 149 SHEET 4 AA5 4 VAL A 173 LEU A 174 -1 N VAL A 173 O SER A 181 SHEET 1 AA6 3 THR A 155 TRP A 158 0 SHEET 2 AA6 3 ILE A 199 HIS A 204 -1 O ASN A 201 N SER A 157 SHEET 3 AA6 3 THR A 209 LYS A 214 -1 O VAL A 211 N VAL A 202 SHEET 1 AA7 4 ASN E 354 ILE E 358 0 SHEET 2 AA7 4 CYS E 391 ARG E 403 -1 O VAL E 395 N ILE E 358 SHEET 3 AA7 4 VAL E 524 CYS E 525 -1 O VAL E 524 N PHE E 392 SHEET 4 AA7 4 CYS E 361 VAL E 362 1 N CYS E 361 O CYS E 525 SHEET 1 AA8 5 ASN E 354 ILE E 358 0 SHEET 2 AA8 5 CYS E 391 ARG E 403 -1 O VAL E 395 N ILE E 358 SHEET 3 AA8 5 PRO E 507 GLU E 516 -1 O TYR E 508 N ILE E 402 SHEET 4 AA8 5 GLY E 431 ASN E 437 -1 N CYS E 432 O LEU E 513 SHEET 5 AA8 5 THR E 376 TYR E 380 -1 N LYS E 378 O VAL E 433 SHEET 1 AA9 2 LEU E 452 ARG E 454 0 SHEET 2 AA9 2 LEU E 492 SER E 494 -1 O GLN E 493 N TYR E 453 SHEET 1 AB1 2 TYR E 473 GLN E 474 0 SHEET 2 AB1 2 CYS E 488 TYR E 489 -1 O TYR E 489 N TYR E 473 SHEET 1 AB2 4 LEU L 4 GLN L 6 0 SHEET 2 AB2 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AB2 4 GLU L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 AB2 4 PHE L 62 GLY L 66 -1 N SER L 65 O THR L 72 SHEET 1 AB3 6 PHE L 10 ALA L 13 0 SHEET 2 AB3 6 THR L 100 ILE L 104 1 O GLU L 103 N LEU L 11 SHEET 3 AB3 6 THR L 85 HIS L 90 -1 N TYR L 86 O THR L 100 SHEET 4 AB3 6 LEU L 33 GLN L 38 -1 N GLN L 38 O THR L 85 SHEET 5 AB3 6 LYS L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AB3 6 THR L 53 LEU L 54 -1 O THR L 53 N TYR L 49 SHEET 1 AB4 4 PHE L 10 ALA L 13 0 SHEET 2 AB4 4 THR L 100 ILE L 104 1 O GLU L 103 N LEU L 11 SHEET 3 AB4 4 THR L 85 HIS L 90 -1 N TYR L 86 O THR L 100 SHEET 4 AB4 4 LEU L 96 PHE L 97 -1 O LEU L 96 N HIS L 90 SHEET 1 AB5 4 SER L 112 PHE L 116 0 SHEET 2 AB5 4 THR L 127 PHE L 137 -1 O LEU L 133 N PHE L 114 SHEET 3 AB5 4 TYR L 171 SER L 180 -1 O LEU L 179 N ALA L 128 SHEET 4 AB5 4 SER L 157 VAL L 161 -1 N GLN L 158 O THR L 176 SHEET 1 AB6 3 LYS L 143 VAL L 148 0 SHEET 2 AB6 3 VAL L 189 THR L 195 -1 O GLU L 193 N GLN L 145 SHEET 3 AB6 3 VAL L 203 ASN L 208 -1 O PHE L 207 N TYR L 190 SSBOND 1 CYS A 22 CYS A 95 1555 1555 2.04 SSBOND 2 CYS A 144 CYS A 200 1555 1555 1.99 SSBOND 3 CYS E 336 CYS E 361 1555 1555 2.02 SSBOND 4 CYS E 379 CYS E 432 1555 1555 2.01 SSBOND 5 CYS E 391 CYS E 525 1555 1555 2.04 SSBOND 6 CYS E 480 CYS E 488 1555 1555 2.00 SSBOND 7 CYS L 23 CYS L 88 1555 1555 2.05 SSBOND 8 CYS L 132 CYS L 192 1555 1555 1.99 LINK ND2 ASN E 343 C1 NAG E 601 1555 1555 1.44 CISPEP 1 PHE A 150 PRO A 151 0 -9.94 CRYST1 195.107 86.399 56.555 90.00 100.24 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005125 0.000000 0.000926 0.00000 SCALE2 0.000000 0.011574 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017968 0.00000