HEADER VIRAL PROTEIN 24-MAY-22 7XVR TITLE STRUCTURE OF NEURAMINIDASE FROM INFLUENZA B-LIKE VIRUSES DERIVED FROM TITLE 2 SPINY EEL COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEURAMINIDASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.2.1.18; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: WUHAN SPINY EEL INFLUENZA VIRUS; SOURCE 3 ORGANISM_TAXID: 2116483; SOURCE 4 GENE: NA; SOURCE 5 EXPRESSION_SYSTEM: BACULOVIRUS EXPRESSION VECTOR PFASTBAC1-HM; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 274590; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PFASTBAC1 KEYWDS VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.CHAI,F.GAO REVDAT 3 29-NOV-23 7XVR 1 REMARK REVDAT 2 01-NOV-23 7XVR 1 REMARK REVDAT 1 15-FEB-23 7XVR 0 JRNL AUTH L.LI,Y.CHAI,W.PENG,D.LI,L.SUN,G.F.GAO,J.QI,H.XIAO,W.J.LIU, JRNL AUTH 2 M.VON ITZSTEIN,F.GAO JRNL TITL STRUCTURAL AND INHIBITOR SENSITIVITY ANALYSIS OF INFLUENZA JRNL TITL 2 B-LIKE VIRAL NEURAMINIDASES DERIVED FROM ASIATIC TOAD AND JRNL TITL 3 SPINY EEL. JRNL REF PROC.NATL.ACAD.SCI.USA V. 119 24119 2022 JRNL REFN ESSN 1091-6490 JRNL PMID 36191180 JRNL DOI 10.1073/PNAS.2210724119 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 33876 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 1669 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.5600 - 5.4900 0.99 2738 159 0.1808 0.2041 REMARK 3 2 5.4900 - 4.3600 0.98 2676 149 0.1266 0.1555 REMARK 3 3 4.3600 - 3.8100 0.99 2689 147 0.1213 0.1798 REMARK 3 4 3.8100 - 3.4600 1.00 2685 161 0.1462 0.1754 REMARK 3 5 3.4600 - 3.2100 1.00 2704 142 0.1481 0.2046 REMARK 3 6 3.2100 - 3.0200 1.00 2695 153 0.1611 0.1940 REMARK 3 7 3.0200 - 2.8700 1.00 2715 134 0.1616 0.2329 REMARK 3 8 2.8700 - 2.7500 1.00 2715 121 0.1830 0.2246 REMARK 3 9 2.7500 - 2.6400 1.00 2679 141 0.1755 0.2478 REMARK 3 10 2.6400 - 2.5500 0.99 2691 112 0.1800 0.2612 REMARK 3 11 2.5500 - 2.4700 0.98 2664 115 0.1783 0.2443 REMARK 3 12 2.4700 - 2.4000 0.95 2556 135 0.1816 0.2289 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.075 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.14 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 6084 REMARK 3 ANGLE : 0.994 8275 REMARK 3 CHIRALITY : 0.056 937 REMARK 3 PLANARITY : 0.008 1075 REMARK 3 DIHEDRAL : 13.015 2211 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 22.8605 46.7461 -43.8890 REMARK 3 T TENSOR REMARK 3 T11: 0.1982 T22: 0.2131 REMARK 3 T33: 0.1931 T12: 0.0097 REMARK 3 T13: 0.0074 T23: -0.0088 REMARK 3 L TENSOR REMARK 3 L11: 0.3019 L22: 0.5687 REMARK 3 L33: 0.0523 L12: 0.4033 REMARK 3 L13: -0.0836 L23: -0.1440 REMARK 3 S TENSOR REMARK 3 S11: 0.0018 S12: -0.0044 S13: 0.0310 REMARK 3 S21: 0.0209 S22: -0.0054 S23: 0.0508 REMARK 3 S31: -0.0066 S32: 0.0024 S33: 0.0054 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : NULL REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : NULL REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7XVR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1300029713. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-DEC-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL02U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35110 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3K36 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4.0 M POTASSIUM FORMATE, 0.1 M BIS REMARK 280 -TRIS PROPANE PH 9.0, 2% W/V POLYETHYLENE GLYCOL MONOMETHYL REMARK 280 ETHER 2,000., VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 63.25650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 63.25650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 55.58650 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 63.25650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 63.25650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.58650 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 63.25650 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 63.25650 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 55.58650 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 63.25650 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 63.25650 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 55.58650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 44990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 126.51300 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 126.51300 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 126.51300 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 126.51300 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 602 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 601 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 743 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 744 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 69 REMARK 465 SER A 70 REMARK 465 LEU A 71 REMARK 465 VAL A 72 REMARK 465 PRO A 73 REMARK 465 ARG A 74 REMARK 465 GLY A 75 REMARK 465 SER A 76 REMARK 465 PRO A 77 REMARK 465 SER A 78 REMARK 465 ARG A 79 REMARK 465 SER A 80 REMARK 465 GLU A 81 REMARK 465 PHE A 82 REMARK 465 THR A 83 REMARK 465 GLY B 69 REMARK 465 SER B 70 REMARK 465 LEU B 71 REMARK 465 VAL B 72 REMARK 465 PRO B 73 REMARK 465 ARG B 74 REMARK 465 GLY B 75 REMARK 465 SER B 76 REMARK 465 PRO B 77 REMARK 465 SER B 78 REMARK 465 ARG B 79 REMARK 465 SER B 80 REMARK 465 GLU B 81 REMARK 465 PHE B 82 REMARK 465 THR B 83 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG B 86 OE2 GLU B 419 1.99 REMARK 500 O HOH B 739 O HOH B 750 2.16 REMARK 500 O HOH A 613 O HOH A 730 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 96 -175.65 -170.10 REMARK 500 MET A 100 -72.11 -91.23 REMARK 500 SER A 204 58.53 -156.38 REMARK 500 ASN A 225 79.45 -154.63 REMARK 500 ILE A 226 71.03 56.62 REMARK 500 THR A 229 -157.94 -138.89 REMARK 500 ASN A 288 -161.41 -164.51 REMARK 500 SER A 348 -124.40 -77.95 REMARK 500 GLU A 394 11.29 -144.58 REMARK 500 TRP A 413 -111.07 -113.84 REMARK 500 SER A 445 -150.37 -157.18 REMARK 500 MET B 100 -75.46 -90.45 REMARK 500 SER B 204 52.69 -158.70 REMARK 500 ALA B 223 14.67 -141.02 REMARK 500 ASN B 225 84.79 -157.51 REMARK 500 THR B 229 -154.16 -130.20 REMARK 500 ASN B 288 -155.62 -161.42 REMARK 500 ALA B 300 -30.82 -133.50 REMARK 500 SER B 348 -130.93 -76.88 REMARK 500 TRP B 413 -113.20 -110.37 REMARK 500 SER B 445 -146.64 -156.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 500 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 298 O REMARK 620 2 SER A 302 O 84.1 REMARK 620 3 ASP A 329 OD2 85.4 99.1 REMARK 620 4 GLY A 349 O 88.2 82.7 173.1 REMARK 620 5 GLY A 351 O 79.9 155.1 98.4 77.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 500 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 298 O REMARK 620 2 SER B 302 O 87.3 REMARK 620 3 ASP B 329 OD2 86.4 103.0 REMARK 620 4 GLY B 349 O 85.9 88.7 165.7 REMARK 620 5 GLY B 351 O 81.1 158.3 94.5 72.3 REMARK 620 N 1 2 3 4 DBREF1 7XVR A 83 472 UNP A0A2P1GNP4_9ORTO DBREF2 7XVR A A0A2P1GNP4 83 472 DBREF1 7XVR B 83 472 UNP A0A2P1GNP4_9ORTO DBREF2 7XVR B A0A2P1GNP4 83 472 SEQADV 7XVR GLY A 69 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR SER A 70 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR LEU A 71 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR VAL A 72 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR PRO A 73 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR ARG A 74 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR GLY A 75 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR SER A 76 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR PRO A 77 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR SER A 78 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR ARG A 79 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR SER A 80 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR GLU A 81 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR PHE A 82 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR GLY B 69 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR SER B 70 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR LEU B 71 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR VAL B 72 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR PRO B 73 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR ARG B 74 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR GLY B 75 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR SER B 76 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR PRO B 77 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR SER B 78 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR ARG B 79 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR SER B 80 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR GLU B 81 UNP A0A2P1GNP EXPRESSION TAG SEQADV 7XVR PHE B 82 UNP A0A2P1GNP EXPRESSION TAG SEQRES 1 A 404 GLY SER LEU VAL PRO ARG GLY SER PRO SER ARG SER GLU SEQRES 2 A 404 PHE THR GLU TRP ARG PHE PRO LYS SER THR CYS PRO GLY SEQRES 3 A 404 ARG SER LEU GLN LYS MET LEU GLN LEU ASN PRO HIS ARG SEQRES 4 A 404 HIS ALA THR ALA GLY SER GLN ALA ALA THR ILE PRO ASN SEQRES 5 A 404 ARG GLU PRO PHE ILE SER CYS SER GLN ASP GLU CYS ARG SEQRES 6 A 404 LEU PHE THR LEU ASP HIS ASP VAL SER THR PRO GLY ALA SEQRES 7 A 404 TYR ASP GLY ILE THR TRP GLU ASP ARG SER LYS ARG ARG SEQRES 8 A 404 ARG LEU VAL SER PHE PRO LEU GLY SER GLU LEU THR LEU SEQRES 9 A 404 ASP ASN MET LYS VAL HIS LEU SER GLY TRP SER GLY THR SEQRES 10 A 404 ALA CYS HIS ASP GLY LYS GLU TRP THR TYR ALA THR VAL SEQRES 11 A 404 ASN GLY PRO ASP ASN SER ALA VAL MET ARG LEU LYS TYR SEQRES 12 A 404 GLY ASP GLN ILE ARG GLY SER PHE PRO SER TYR ALA ASN SEQRES 13 A 404 ASN ILE LEU ARG THR GLN GLU SER GLU CYS VAL CYS ILE SEQRES 14 A 404 ASP GLY LYS CYS TYR ILE ILE VAL ILE ASP GLY PRO ALA SEQRES 15 A 404 GLY GLY THR ALA THR PRO LYS VAL LEU VAL THR ARG GLU SEQRES 16 A 404 GLY GLU VAL THR SER GLU ILE ILE VAL THR GLY ARG ASN SEQRES 17 A 404 LYS MET GLY GLU GLU CYS SER CYS LEU ALA THR ASN ARG SEQRES 18 A 404 THR TRP ILE GLU CYS LEU CYS ARG ASP ASN ALA PHE SER SEQRES 19 A 404 ALA LYS ARG PRO ILE ILE ARG ILE ASP THR VAL ALA GLY SEQRES 20 A 404 THR ALA ARG GLY TYR LEU MET CYS SER ASP THR TYR LEU SEQRES 21 A 404 ASP THR PRO ARG PRO ALA ASP GLY SER ILE THR GLY SER SEQRES 22 A 404 CYS GLU THR ASP GLY THR SER GLY GLY GLY GLY VAL LYS SEQRES 23 A 404 GLY ALA PHE ALA LEU SER ARG THR THR GLU ALA THR THR SEQRES 24 A 404 GLU ARG PHE TYR VAL ARG THR VAL SER SER SER ALA ARG SEQRES 25 A 404 SER GLY ALA VAL PHE TYR LYS THR THR ASP ASP PRO THR SEQRES 26 A 404 GLU SER ASN ASN PRO LEU THR LEU ILE GLY THR ALA VAL SEQRES 27 A 404 GLY GLY ALA ILE PRO MET TRP TYR SER PHE SER PHE GLU SEQRES 28 A 404 ILE PRO GLY LYS VAL CYS ASP GLN THR CYS ILE GLY LEU SEQRES 29 A 404 GLU MET GLY LEU THR MET GLY HIS GLN LEU TRP THR SER SEQRES 30 A 404 ASN SER VAL ALA VAL TYR CYS VAL ILE GLY ASP ASN LEU SEQRES 31 A 404 ASP TRP ASP SER THR THR ASP VAL VAL PRO ALA ASP ILE SEQRES 32 A 404 VAL SEQRES 1 B 404 GLY SER LEU VAL PRO ARG GLY SER PRO SER ARG SER GLU SEQRES 2 B 404 PHE THR GLU TRP ARG PHE PRO LYS SER THR CYS PRO GLY SEQRES 3 B 404 ARG SER LEU GLN LYS MET LEU GLN LEU ASN PRO HIS ARG SEQRES 4 B 404 HIS ALA THR ALA GLY SER GLN ALA ALA THR ILE PRO ASN SEQRES 5 B 404 ARG GLU PRO PHE ILE SER CYS SER GLN ASP GLU CYS ARG SEQRES 6 B 404 LEU PHE THR LEU ASP HIS ASP VAL SER THR PRO GLY ALA SEQRES 7 B 404 TYR ASP GLY ILE THR TRP GLU ASP ARG SER LYS ARG ARG SEQRES 8 B 404 ARG LEU VAL SER PHE PRO LEU GLY SER GLU LEU THR LEU SEQRES 9 B 404 ASP ASN MET LYS VAL HIS LEU SER GLY TRP SER GLY THR SEQRES 10 B 404 ALA CYS HIS ASP GLY LYS GLU TRP THR TYR ALA THR VAL SEQRES 11 B 404 ASN GLY PRO ASP ASN SER ALA VAL MET ARG LEU LYS TYR SEQRES 12 B 404 GLY ASP GLN ILE ARG GLY SER PHE PRO SER TYR ALA ASN SEQRES 13 B 404 ASN ILE LEU ARG THR GLN GLU SER GLU CYS VAL CYS ILE SEQRES 14 B 404 ASP GLY LYS CYS TYR ILE ILE VAL ILE ASP GLY PRO ALA SEQRES 15 B 404 GLY GLY THR ALA THR PRO LYS VAL LEU VAL THR ARG GLU SEQRES 16 B 404 GLY GLU VAL THR SER GLU ILE ILE VAL THR GLY ARG ASN SEQRES 17 B 404 LYS MET GLY GLU GLU CYS SER CYS LEU ALA THR ASN ARG SEQRES 18 B 404 THR TRP ILE GLU CYS LEU CYS ARG ASP ASN ALA PHE SER SEQRES 19 B 404 ALA LYS ARG PRO ILE ILE ARG ILE ASP THR VAL ALA GLY SEQRES 20 B 404 THR ALA ARG GLY TYR LEU MET CYS SER ASP THR TYR LEU SEQRES 21 B 404 ASP THR PRO ARG PRO ALA ASP GLY SER ILE THR GLY SER SEQRES 22 B 404 CYS GLU THR ASP GLY THR SER GLY GLY GLY GLY VAL LYS SEQRES 23 B 404 GLY ALA PHE ALA LEU SER ARG THR THR GLU ALA THR THR SEQRES 24 B 404 GLU ARG PHE TYR VAL ARG THR VAL SER SER SER ALA ARG SEQRES 25 B 404 SER GLY ALA VAL PHE TYR LYS THR THR ASP ASP PRO THR SEQRES 26 B 404 GLU SER ASN ASN PRO LEU THR LEU ILE GLY THR ALA VAL SEQRES 27 B 404 GLY GLY ALA ILE PRO MET TRP TYR SER PHE SER PHE GLU SEQRES 28 B 404 ILE PRO GLY LYS VAL CYS ASP GLN THR CYS ILE GLY LEU SEQRES 29 B 404 GLU MET GLY LEU THR MET GLY HIS GLN LEU TRP THR SER SEQRES 30 B 404 ASN SER VAL ALA VAL TYR CYS VAL ILE GLY ASP ASN LEU SEQRES 31 B 404 ASP TRP ASP SER THR THR ASP VAL VAL PRO ALA ASP ILE SEQRES 32 B 404 VAL HET CA A 500 1 HET NAG A 501 14 HET CA B 500 1 HET NAG B 501 14 HETNAM CA CALCIUM ION HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 CA 2(CA 2+) FORMUL 4 NAG 2(C8 H15 N O6) FORMUL 7 HOH *319(H2 O) HELIX 1 AA1 ASN A 104 ALA A 109 5 6 HELIX 2 AA2 TYR A 147 THR A 151 5 5 HELIX 3 AA3 THR A 171 MET A 175 5 5 HELIX 4 AA4 VAL A 467 ILE A 471 5 5 HELIX 5 AA5 ASN B 104 ALA B 109 5 6 HELIX 6 AA6 TYR B 147 THR B 151 5 5 HELIX 7 AA7 PRO B 201 SER B 204 5 4 HELIX 8 AA8 VAL B 467 ILE B 471 5 5 SHEET 1 AA1 4 LEU A 97 LEU A 103 0 SHEET 2 AA1 4 THR A 444 VAL A 453 -1 O VAL A 450 N MET A 100 SHEET 3 AA1 4 GLN A 427 THR A 437 -1 N LEU A 436 O SER A 445 SHEET 4 AA1 4 SER A 415 ILE A 420 -1 N ILE A 420 O GLN A 427 SHEET 1 AA2 4 ARG A 121 CYS A 127 0 SHEET 2 AA2 4 CYS A 132 LEU A 137 -1 O PHE A 135 N PHE A 124 SHEET 3 AA2 4 ARG A 160 PRO A 165 -1 O PHE A 164 N LEU A 134 SHEET 4 AA2 4 LYS A 176 SER A 180 -1 O LEU A 179 N LEU A 161 SHEET 1 AA3 4 SER A 183 HIS A 188 0 SHEET 2 AA3 4 TRP A 193 ASN A 199 -1 O ALA A 196 N THR A 185 SHEET 3 AA3 4 VAL A 206 TYR A 211 -1 O LYS A 210 N TYR A 195 SHEET 4 AA3 4 GLN A 214 PRO A 220 -1 O GLN A 214 N TYR A 211 SHEET 1 AA4 8 VAL A 235 ILE A 237 0 SHEET 2 AA4 8 LYS A 240 VAL A 245 -1 O TYR A 242 N VAL A 235 SHEET 3 AA4 8 LYS A 257 ARG A 262 -1 O LEU A 259 N ILE A 243 SHEET 4 AA4 8 GLU A 265 GLY A 274 -1 O ILE A 270 N VAL A 258 SHEET 5 AA4 8 THR A 316 LEU A 321 1 O GLY A 319 N THR A 273 SHEET 6 AA4 8 PRO A 306 ASP A 311 -1 N ILE A 307 O TYR A 320 SHEET 7 AA4 8 TRP A 291 ARG A 297 -1 N CYS A 294 O ILE A 308 SHEET 8 AA4 8 GLU A 280 ALA A 286 -1 N SER A 283 O LEU A 295 SHEET 1 AA5 4 PHE A 357 ARG A 361 0 SHEET 2 AA5 4 THR A 366 ARG A 373 -1 O PHE A 370 N ALA A 358 SHEET 3 AA5 4 SER A 381 THR A 388 -1 O VAL A 384 N ARG A 373 SHEET 4 AA5 4 THR A 400 PRO A 411 -1 O GLY A 403 N PHE A 385 SHEET 1 AA6 4 LEU B 97 LEU B 103 0 SHEET 2 AA6 4 THR B 444 VAL B 453 -1 O VAL B 448 N LEU B 103 SHEET 3 AA6 4 GLN B 427 THR B 437 -1 N ILE B 430 O TYR B 451 SHEET 4 AA6 4 SER B 415 ILE B 420 -1 N ILE B 420 O GLN B 427 SHEET 1 AA7 4 ASN B 120 CYS B 127 0 SHEET 2 AA7 4 CYS B 132 ASP B 138 -1 O PHE B 135 N PHE B 124 SHEET 3 AA7 4 ARG B 160 PRO B 165 -1 O VAL B 162 N THR B 136 SHEET 4 AA7 4 LYS B 176 SER B 180 -1 O LEU B 179 N LEU B 161 SHEET 1 AA8 4 SER B 183 HIS B 188 0 SHEET 2 AA8 4 TRP B 193 ASN B 199 -1 O ALA B 196 N THR B 185 SHEET 3 AA8 4 VAL B 206 TYR B 211 -1 O VAL B 206 N ASN B 199 SHEET 4 AA8 4 GLN B 214 PRO B 220 -1 O GLN B 214 N TYR B 211 SHEET 1 AA9 8 VAL B 235 ILE B 237 0 SHEET 2 AA9 8 LYS B 240 ASP B 247 -1 O LYS B 240 N ILE B 237 SHEET 3 AA9 8 THR B 255 ARG B 262 -1 O LEU B 259 N ILE B 243 SHEET 4 AA9 8 GLU B 265 GLY B 274 -1 O ILE B 270 N VAL B 258 SHEET 5 AA9 8 THR B 316 LEU B 321 1 O GLY B 319 N THR B 273 SHEET 6 AA9 8 PRO B 306 ASP B 311 -1 N ILE B 307 O TYR B 320 SHEET 7 AA9 8 TRP B 291 ARG B 297 -1 N CYS B 296 O PRO B 306 SHEET 8 AA9 8 GLU B 280 ALA B 286 -1 N GLU B 280 O ARG B 297 SHEET 1 AB1 4 PHE B 357 ARG B 361 0 SHEET 2 AB1 4 THR B 366 ARG B 373 -1 O PHE B 370 N ALA B 358 SHEET 3 AB1 4 SER B 381 THR B 388 -1 O VAL B 384 N ARG B 373 SHEET 4 AB1 4 THR B 400 PRO B 411 -1 O THR B 400 N LYS B 387 SSBOND 1 CYS A 92 CYS A 425 1555 1555 2.06 SSBOND 2 CYS A 127 CYS A 132 1555 1555 2.11 SSBOND 3 CYS A 187 CYS A 234 1555 1555 2.05 SSBOND 4 CYS A 236 CYS A 241 1555 1555 2.06 SSBOND 5 CYS A 282 CYS A 296 1555 1555 2.08 SSBOND 6 CYS A 284 CYS A 294 1555 1555 2.06 SSBOND 7 CYS A 323 CYS A 342 1555 1555 2.06 SSBOND 8 CYS A 429 CYS A 452 1555 1555 2.07 SSBOND 9 CYS B 92 CYS B 425 1555 1555 2.07 SSBOND 10 CYS B 127 CYS B 132 1555 1555 2.09 SSBOND 11 CYS B 187 CYS B 234 1555 1555 2.03 SSBOND 12 CYS B 236 CYS B 241 1555 1555 2.08 SSBOND 13 CYS B 282 CYS B 296 1555 1555 2.08 SSBOND 14 CYS B 284 CYS B 294 1555 1555 2.07 SSBOND 15 CYS B 323 CYS B 342 1555 1555 2.06 SSBOND 16 CYS B 429 CYS B 452 1555 1555 2.10 LINK ND2 ASN A 288 C1 NAG A 501 1555 1555 1.45 LINK ND2 ASN B 288 C1 NAG B 501 1555 1555 1.45 LINK O ASP A 298 CA CA A 500 1555 1555 2.64 LINK O SER A 302 CA CA A 500 1555 1555 2.55 LINK OD2 ASP A 329 CA CA A 500 1555 1555 2.86 LINK O GLY A 349 CA CA A 500 1555 1555 3.09 LINK O GLY A 351 CA CA A 500 1555 1555 2.53 LINK O ASP B 298 CA CA B 500 1555 1555 2.49 LINK O SER B 302 CA CA B 500 1555 1555 2.52 LINK OD2 ASP B 329 CA CA B 500 1555 1555 2.86 LINK O GLY B 349 CA CA B 500 1555 1555 3.04 LINK O GLY B 351 CA CA B 500 1555 1555 2.65 CISPEP 1 THR A 143 PRO A 144 0 4.25 CISPEP 2 THR A 330 PRO A 331 0 -0.05 CISPEP 3 THR B 143 PRO B 144 0 1.24 CISPEP 4 THR B 330 PRO B 331 0 -1.03 CRYST1 126.513 126.513 111.173 90.00 90.00 90.00 I 4 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007904 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007904 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008995 0.00000 MTRIX1 1 -0.505373 -0.862901 0.000441 63.20979 1 MTRIX2 1 -0.862901 0.505373 -0.000684 63.12401 1 MTRIX3 1 0.000367 -0.000726 -1.000000 -87.78608 1