HEADER TRANSCRIPTION/INHIBITOR 25-MAY-22 7XVZ TITLE HUMAN ESTROGEN RECEPTOR BETA LIGAND-BINDING DOMAIN IN COMPLEX WITH TITLE 2 (R)-3-(2-CHLORO-4-HYDROXYPHENYL)-2-(4-HYDROXYPHENYL)PROPANENITRILE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTROGEN RECEPTOR BETA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: LIGAND-BINDING DOMAIN; COMPND 5 SYNONYM: ER-BETA,NUCLEAR RECEPTOR SUBFAMILY 3 GROUP A MEMBER 2; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: SRC PEPTIDE; COMPND 10 CHAIN: C, D; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ESR2, ESTRB, NR3A2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606 KEYWDS INHIBITOR, TRANSCRIPTION, TRANSCRIPTION-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR N.FURUYA,C.HANDA REVDAT 3 29-NOV-23 7XVZ 1 REMARK REVDAT 2 27-JUL-22 7XVZ 1 TITLE JRNL REVDAT 1 20-JUL-22 7XVZ 0 JRNL AUTH C.HANDA,Y.YAMAZAKI,S.YONEKUBO,N.FURUYA,T.MOMOSE,T.OZAWA, JRNL AUTH 2 T.FURUISHI,K.FUKUZAWA,E.YONEMOCHI JRNL TITL EVALUATING THE CORRELATION OF BINDING AFFINITIES BETWEEN JRNL TITL 2 ISOTHERMAL TITRATION CALORIMETRY AND FRAGMENT MOLECULAR JRNL TITL 3 ORBITAL METHOD OF ESTROGEN RECEPTOR BETA WITH JRNL TITL 4 DIARYLPROPIONITRILE (DPN) OR DPN DERIVATIVES. JRNL REF J.STEROID BIOCHEM.MOL.BIOL. V. 222 06152 2022 JRNL REFN ISSN 0960-0760 JRNL PMID 35810932 JRNL DOI 10.1016/J.JSBMB.2022.106152 REMARK 2 REMARK 2 RESOLUTION. 2.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 28068 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.267 REMARK 3 R VALUE (WORKING SET) : 0.241 REMARK 3 FREE R VALUE : 0.307 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1387 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.08 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.13 REMARK 3 REFLECTION IN BIN (WORKING SET) : 798 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 30.31 REMARK 3 BIN R VALUE (WORKING SET) : 0.6700 REMARK 3 BIN FREE R VALUE SET COUNT : 41 REMARK 3 BIN FREE R VALUE : 0.6890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3427 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 38 REMARK 3 SOLVENT ATOMS : 10 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.03000 REMARK 3 B22 (A**2) : 1.74000 REMARK 3 B33 (A**2) : -0.71000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.241 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.220 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.903 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3521 ; 0.009 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3327 ; 0.036 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4752 ; 1.556 ; 1.614 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7708 ; 2.368 ; 1.570 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 455 ; 5.971 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 119 ;39.624 ;23.866 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 630 ;15.710 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;14.304 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 466 ; 0.072 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3820 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 643 ; 0.010 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1839 ; 3.354 ; 3.972 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1838 ; 3.348 ; 3.970 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2289 ; 4.856 ; 5.943 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7XVZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1300029738. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAY-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9800 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28068 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.080 REMARK 200 RESOLUTION RANGE LOW (A) : 46.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.08 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.13 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2GIU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16-20% PEG3350, 100 MM BISTRIS PH6.5, REMARK 280 200 MM MAGNESIUM ACETATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.86400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.62600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.29000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.62600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.86400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.29000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 256 REMARK 465 PRO A 257 REMARK 465 LEU A 258 REMARK 465 GLY A 259 REMARK 465 SER A 260 REMARK 465 ASP A 261 REMARK 465 ALA A 262 REMARK 465 PRO A 285 REMARK 465 SER A 286 REMARK 465 ALA A 287 REMARK 465 PRO A 288 REMARK 465 PHE A 289 REMARK 465 THR A 290 REMARK 465 MET A 410 REMARK 465 TYR A 411 REMARK 465 PRO A 412 REMARK 465 LEU A 413 REMARK 465 VAL A 414 REMARK 465 THR A 415 REMARK 465 ALA A 416 REMARK 465 THR A 417 REMARK 465 GLN A 418 REMARK 465 ASP A 419 REMARK 465 ALA A 420 REMARK 465 VAL A 499 REMARK 465 LEU A 500 REMARK 465 ASP A 501 REMARK 465 ASP A 502 REMARK 465 GLY B 256 REMARK 465 PRO B 257 REMARK 465 LEU B 258 REMARK 465 GLY B 259 REMARK 465 SER B 260 REMARK 465 ASP B 261 REMARK 465 ALA B 262 REMARK 465 MET B 410 REMARK 465 TYR B 411 REMARK 465 PRO B 412 REMARK 465 LEU B 413 REMARK 465 VAL B 414 REMARK 465 THR B 415 REMARK 465 ALA B 416 REMARK 465 THR B 417 REMARK 465 GLN B 418 REMARK 465 ASP B 419 REMARK 465 ALA B 420 REMARK 465 VAL B 499 REMARK 465 LEU B 500 REMARK 465 ASP B 501 REMARK 465 ASP B 502 REMARK 465 SER C 601 REMARK 465 GLY C 602 REMARK 465 THR C 613 REMARK 465 SER D 601 REMARK 465 GLY D 602 REMARK 465 SER D 603 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 263 CD1 CD2 REMARK 470 LEU A 270 CD1 CD2 REMARK 470 HIS A 279 CB CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 284 CA C O CB CG CD NE REMARK 470 ARG A 284 CZ NH1 NH2 REMARK 470 GLU A 291 CB CG CD OE1 OE2 REMARK 470 GLU A 321 OE1 OE2 REMARK 470 ARG A 329 CD NE CZ NH1 NH2 REMARK 470 GLU A 337 OE1 OE2 REMARK 470 ARG A 364 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 365 CB CG OD1 OD2 REMARK 470 LYS A 368 CG CD CE NZ REMARK 470 LEU A 374 CD1 CD2 REMARK 470 MET A 379 CE REMARK 470 ARG A 386 CD NE CZ NH1 NH2 REMARK 470 ILE A 404 CG2 CD1 REMARK 470 SER A 409 C O CB OG REMARK 470 ASP A 421 CB CG OD1 OD2 REMARK 470 ARG A 424 CB CG CD NE CZ NH1 NH2 REMARK 470 LYS A 425 CG CD CE NZ REMARK 470 LEU A 429 CD1 CD2 REMARK 470 ASN A 431 OD1 ND2 REMARK 470 ASP A 435 OD1 OD2 REMARK 470 ARG A 466 CD NE CZ NH1 NH2 REMARK 470 LYS A 471 CG CD CE NZ REMARK 470 LEU A 477 CD1 REMARK 470 MET A 479 CE REMARK 470 VAL A 487 CB CG1 CG2 REMARK 470 LEU A 492 CG CD1 CD2 REMARK 470 GLU A 493 CG CD OE1 OE2 REMARK 470 MET A 494 CE REMARK 470 LEU A 495 CD1 CD2 REMARK 470 LEU B 263 CB CG CD1 CD2 REMARK 470 GLU B 266 OE1 OE2 REMARK 470 LEU B 270 CD1 CD2 REMARK 470 HIS B 279 CB CG ND1 CD2 CE1 NE2 REMARK 470 SER B 283 CB OG REMARK 470 GLU B 291 CG CD OE1 OE2 REMARK 470 ILE B 310 CD1 REMARK 470 LYS B 315 CE NZ REMARK 470 LEU B 324 CD1 CD2 REMARK 470 ILE B 348 CD1 REMARK 470 ILE B 355 CD1 REMARK 470 LEU B 362 CG CD1 CD2 REMARK 470 ASP B 365 CG OD1 OD2 REMARK 470 VAL B 370 CG1 CG2 REMARK 470 ILE B 373 CG2 CD1 REMARK 470 LEU B 374 CD1 CD2 REMARK 470 ARG B 386 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 400 CG1 CG2 REMARK 470 SER B 409 C O CB OG REMARK 470 SER B 422 OG REMARK 470 SER B 423 OG REMARK 470 ARG B 424 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 431 OD1 ND2 REMARK 470 LYS B 443 CD CE NZ REMARK 470 SER B 448 OG REMARK 470 LEU B 461 CD1 CD2 REMARK 470 LEU B 462 CD1 CD2 REMARK 470 SER B 463 OG REMARK 470 ARG B 466 CD NE CZ NH1 NH2 REMARK 470 LYS B 471 CD CE NZ REMARK 470 LEU B 477 CD1 CD2 REMARK 470 ASN B 478 OD1 REMARK 470 ASN B 483 CB CG OD1 ND2 REMARK 470 VAL B 484 CG1 CG2 REMARK 470 VAL B 485 CB CG1 CG2 REMARK 470 VAL B 487 CB CG1 CG2 REMARK 470 TYR B 488 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR B 488 OH REMARK 470 ASP B 489 CB CG OD1 OD2 REMARK 470 LEU B 490 CD1 CD2 REMARK 470 MET B 494 CE REMARK 470 LEU B 495 CD1 CD2 REMARK 470 HIS B 498 CA C O CB CG ND1 CD2 REMARK 470 HIS B 498 CE1 NE2 REMARK 470 HIS C 604 CG ND1 CD2 CE1 NE2 REMARK 470 LYS C 605 CG CD CE NZ REMARK 470 HIS D 604 CG ND1 CD2 CE1 NE2 REMARK 470 LEU D 606 CD1 REMARK 470 THR D 612 OG1 CG2 REMARK 470 THR D 613 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 350 69.50 -118.29 REMARK 500 LEU A 392 125.31 -37.06 REMARK 500 ASN B 483 -56.41 77.42 REMARK 500 VAL B 484 -46.01 -21.21 REMARK 500 ASP B 489 -78.56 -32.60 REMARK 500 HIS C 604 41.78 -141.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7XVY RELATED DB: PDB DBREF 7XVZ A 261 500 UNP Q92731 ESR2_HUMAN 261 500 DBREF 7XVZ B 261 500 UNP Q92731 ESR2_HUMAN 261 500 DBREF 7XVZ C 601 613 PDB 7XVZ 7XVZ 601 613 DBREF 7XVZ D 601 613 PDB 7XVZ 7XVZ 601 613 SEQADV 7XVZ GLY A 256 UNP Q92731 EXPRESSION TAG SEQADV 7XVZ PRO A 257 UNP Q92731 EXPRESSION TAG SEQADV 7XVZ LEU A 258 UNP Q92731 EXPRESSION TAG SEQADV 7XVZ GLY A 259 UNP Q92731 EXPRESSION TAG SEQADV 7XVZ SER A 260 UNP Q92731 EXPRESSION TAG SEQADV 7XVZ SER A 334 UNP Q92731 CYS 334 ENGINEERED MUTATION SEQADV 7XVZ SER A 369 UNP Q92731 CYS 369 ENGINEERED MUTATION SEQADV 7XVZ SER A 481 UNP Q92731 CYS 481 ENGINEERED MUTATION SEQADV 7XVZ ASP A 501 UNP Q92731 EXPRESSION TAG SEQADV 7XVZ ASP A 502 UNP Q92731 EXPRESSION TAG SEQADV 7XVZ GLY B 256 UNP Q92731 EXPRESSION TAG SEQADV 7XVZ PRO B 257 UNP Q92731 EXPRESSION TAG SEQADV 7XVZ LEU B 258 UNP Q92731 EXPRESSION TAG SEQADV 7XVZ GLY B 259 UNP Q92731 EXPRESSION TAG SEQADV 7XVZ SER B 260 UNP Q92731 EXPRESSION TAG SEQADV 7XVZ SER B 334 UNP Q92731 CYS 334 ENGINEERED MUTATION SEQADV 7XVZ SER B 369 UNP Q92731 CYS 369 ENGINEERED MUTATION SEQADV 7XVZ SER B 481 UNP Q92731 CYS 481 ENGINEERED MUTATION SEQADV 7XVZ ASP B 501 UNP Q92731 EXPRESSION TAG SEQADV 7XVZ ASP B 502 UNP Q92731 EXPRESSION TAG SEQRES 1 A 247 GLY PRO LEU GLY SER ASP ALA LEU SER PRO GLU GLN LEU SEQRES 2 A 247 VAL LEU THR LEU LEU GLU ALA GLU PRO PRO HIS VAL LEU SEQRES 3 A 247 ILE SER ARG PRO SER ALA PRO PHE THR GLU ALA SER MET SEQRES 4 A 247 MET MET SER LEU THR LYS LEU ALA ASP LYS GLU LEU VAL SEQRES 5 A 247 HIS MET ILE SER TRP ALA LYS LYS ILE PRO GLY PHE VAL SEQRES 6 A 247 GLU LEU SER LEU PHE ASP GLN VAL ARG LEU LEU GLU SER SEQRES 7 A 247 SER TRP MET GLU VAL LEU MET MET GLY LEU MET TRP ARG SEQRES 8 A 247 SER ILE ASP HIS PRO GLY LYS LEU ILE PHE ALA PRO ASP SEQRES 9 A 247 LEU VAL LEU ASP ARG ASP GLU GLY LYS SER VAL GLU GLY SEQRES 10 A 247 ILE LEU GLU ILE PHE ASP MET LEU LEU ALA THR THR SER SEQRES 11 A 247 ARG PHE ARG GLU LEU LYS LEU GLN HIS LYS GLU TYR LEU SEQRES 12 A 247 CYS VAL LYS ALA MET ILE LEU LEU ASN SER SER MET TYR SEQRES 13 A 247 PRO LEU VAL THR ALA THR GLN ASP ALA ASP SER SER ARG SEQRES 14 A 247 LYS LEU ALA HIS LEU LEU ASN ALA VAL THR ASP ALA LEU SEQRES 15 A 247 VAL TRP VAL ILE ALA LYS SER GLY ILE SER SER GLN GLN SEQRES 16 A 247 GLN SER MET ARG LEU ALA ASN LEU LEU MET LEU LEU SER SEQRES 17 A 247 HIS VAL ARG HIS ALA SER ASN LYS GLY MET GLU HIS LEU SEQRES 18 A 247 LEU ASN MET LYS SER LYS ASN VAL VAL PRO VAL TYR ASP SEQRES 19 A 247 LEU LEU LEU GLU MET LEU ASN ALA HIS VAL LEU ASP ASP SEQRES 1 B 247 GLY PRO LEU GLY SER ASP ALA LEU SER PRO GLU GLN LEU SEQRES 2 B 247 VAL LEU THR LEU LEU GLU ALA GLU PRO PRO HIS VAL LEU SEQRES 3 B 247 ILE SER ARG PRO SER ALA PRO PHE THR GLU ALA SER MET SEQRES 4 B 247 MET MET SER LEU THR LYS LEU ALA ASP LYS GLU LEU VAL SEQRES 5 B 247 HIS MET ILE SER TRP ALA LYS LYS ILE PRO GLY PHE VAL SEQRES 6 B 247 GLU LEU SER LEU PHE ASP GLN VAL ARG LEU LEU GLU SER SEQRES 7 B 247 SER TRP MET GLU VAL LEU MET MET GLY LEU MET TRP ARG SEQRES 8 B 247 SER ILE ASP HIS PRO GLY LYS LEU ILE PHE ALA PRO ASP SEQRES 9 B 247 LEU VAL LEU ASP ARG ASP GLU GLY LYS SER VAL GLU GLY SEQRES 10 B 247 ILE LEU GLU ILE PHE ASP MET LEU LEU ALA THR THR SER SEQRES 11 B 247 ARG PHE ARG GLU LEU LYS LEU GLN HIS LYS GLU TYR LEU SEQRES 12 B 247 CYS VAL LYS ALA MET ILE LEU LEU ASN SER SER MET TYR SEQRES 13 B 247 PRO LEU VAL THR ALA THR GLN ASP ALA ASP SER SER ARG SEQRES 14 B 247 LYS LEU ALA HIS LEU LEU ASN ALA VAL THR ASP ALA LEU SEQRES 15 B 247 VAL TRP VAL ILE ALA LYS SER GLY ILE SER SER GLN GLN SEQRES 16 B 247 GLN SER MET ARG LEU ALA ASN LEU LEU MET LEU LEU SER SEQRES 17 B 247 HIS VAL ARG HIS ALA SER ASN LYS GLY MET GLU HIS LEU SEQRES 18 B 247 LEU ASN MET LYS SER LYS ASN VAL VAL PRO VAL TYR ASP SEQRES 19 B 247 LEU LEU LEU GLU MET LEU ASN ALA HIS VAL LEU ASP ASP SEQRES 1 C 13 SER GLY SER HIS LYS LEU VAL GLN LEU LEU THR THR THR SEQRES 1 D 13 SER GLY SER HIS LYS LEU VAL GLN LEU LEU THR THR THR HET I1D A 601 19 HET I1D B 601 19 HETNAM I1D (2~{R})-3-(2-CHLORANYL-4-OXIDANYL-PHENYL)-2-(4- HETNAM 2 I1D HYDROXYPHENYL)PROPANENITRILE FORMUL 5 I1D 2(C15 H12 CL N O2) FORMUL 7 HOH *10(H2 O) HELIX 1 AA1 SER A 264 ALA A 275 1 12 HELIX 2 AA2 ALA A 292 LYS A 315 1 24 HELIX 3 AA3 GLY A 318 LEU A 322 5 5 HELIX 4 AA4 SER A 323 ILE A 348 1 26 HELIX 5 AA5 ASP A 363 LYS A 368 1 6 HELIX 6 AA6 GLY A 372 LEU A 390 1 19 HELIX 7 AA7 GLN A 393 ASN A 407 1 15 HELIX 8 AA8 SER A 422 LYS A 443 1 22 HELIX 9 AA9 SER A 447 LYS A 482 1 36 HELIX 10 AB1 TYR A 488 HIS A 498 1 11 HELIX 11 AB2 SER B 264 GLU B 276 1 13 HELIX 12 AB3 THR B 290 LYS B 315 1 26 HELIX 13 AB4 GLY B 318 LEU B 322 5 5 HELIX 14 AB5 SER B 323 SER B 347 1 25 HELIX 15 AB6 ASP B 365 VAL B 370 5 6 HELIX 16 AB7 GLY B 372 LEU B 390 1 19 HELIX 17 AB8 GLN B 393 ASN B 407 1 15 HELIX 18 AB9 SER B 422 LYS B 443 1 22 HELIX 19 AC1 SER B 447 LYS B 482 1 36 HELIX 20 AC2 TYR B 488 ALA B 497 1 10 HELIX 21 AC3 HIS C 604 THR C 612 1 9 HELIX 22 AC4 LYS D 605 THR D 612 1 8 SHEET 1 AA1 2 LEU A 354 ALA A 357 0 SHEET 2 AA1 2 LEU A 360 LEU A 362 -1 O LEU A 360 N ALA A 357 SHEET 1 AA2 2 LYS B 353 ALA B 357 0 SHEET 2 AA2 2 LEU B 360 ASP B 363 -1 O LEU B 362 N LEU B 354 CRYST1 51.728 88.580 101.252 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019332 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011289 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009876 0.00000