HEADER HYDROLASE 04-JUN-22 7Y0F TITLE CRYSTAL STRUCTURE OF TMPRSS2 IN COMPLEX WITH UK-371804 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSMEMBRANE PROTEASE SERINE 2 CATALYTIC CHAIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: TRANSMEMBRANE PROTEASE SERINE 2 CATALYTIC CHAIN; COMPND 8 CHAIN: C, D; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TMPRSS2, PRSS10; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: TMPRSS2, PRSS10; SOURCE 13 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS INHIBITOR, COMPLEX, HOST, ANTIVIRAL, ANTIVIRAL PROTEIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR H.WANG,Y.DUAN,X.LIU,L.SUN,H.YANG REVDAT 2 19-JUN-24 7Y0F 1 JRNL REVDAT 1 06-DEC-23 7Y0F 0 JRNL AUTH H.WANG,Q.YANG,X.LIU,Z.XU,M.SHAO,D.LI,Y.DUAN,J.TANG,X.YU, JRNL AUTH 2 Y.ZHANG,A.HAO,Y.WANG,J.CHEN,C.ZHU,L.GUDDAT,H.CHEN,L.ZHANG, JRNL AUTH 3 X.CHEN,B.JIANG,L.SUN,Z.RAO,H.YANG JRNL TITL STRUCTURE-BASED DISCOVERY OF DUAL PATHWAY INHIBITORS FOR JRNL TITL 2 SARS-COV-2 ENTRY. JRNL REF NAT COMMUN V. 14 7574 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 37990007 JRNL DOI 10.1038/S41467-023-42527-5 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 23468 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.560 REMARK 3 FREE R VALUE TEST SET COUNT : 2010 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.2500 - 6.2700 0.98 1577 145 0.1928 0.2060 REMARK 3 2 6.2600 - 4.9700 1.00 1559 145 0.2085 0.2156 REMARK 3 3 4.9700 - 4.3400 1.00 1546 147 0.1793 0.1956 REMARK 3 4 4.3400 - 3.9500 0.99 1535 147 0.1695 0.2114 REMARK 3 5 3.9500 - 3.6600 0.99 1541 147 0.1911 0.2116 REMARK 3 6 3.6600 - 3.4500 0.99 1542 145 0.1929 0.2176 REMARK 3 7 3.4500 - 3.2800 0.99 1563 134 0.2236 0.2360 REMARK 3 8 3.2800 - 3.1300 0.99 1509 152 0.2390 0.2558 REMARK 3 9 3.1300 - 3.0100 0.99 1520 141 0.2441 0.2734 REMARK 3 10 3.0100 - 2.9100 0.98 1551 139 0.2617 0.2794 REMARK 3 11 2.9100 - 2.8200 0.98 1492 137 0.2791 0.3118 REMARK 3 12 2.8200 - 2.7400 0.99 1531 147 0.2961 0.2970 REMARK 3 13 2.7400 - 2.6700 0.99 1505 151 0.3138 0.3374 REMARK 3 14 2.6700 - 2.6000 0.95 1487 133 0.3471 0.3588 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 5780 REMARK 3 ANGLE : 1.401 7890 REMARK 3 CHIRALITY : 0.097 846 REMARK 3 PLANARITY : 0.009 1010 REMARK 3 DIHEDRAL : 14.476 2003 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7Y0F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1300029361. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JAN-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL02U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979175 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 2020-12-02 REMARK 200 DATA SCALING SOFTWARE : XDS 2020-12-02 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23484 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 47.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 3.420 REMARK 200 R MERGE (I) : 0.16100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.4800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.76 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.88200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.18.2_3874 REMARK 200 STARTING MODEL: MODEL PREDICTED BY ALPHAFOLD REMARK 200 REMARK 200 REMARK: PLATE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M ACETIC ACID/SODIUM ACETATE, PH REMARK 280 5.0, 16% W/V PEG 8000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 45.60400 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 109 REMARK 465 GLY A 110 REMARK 465 SER A 111 REMARK 465 LYS A 112 REMARK 465 CYS A 113 REMARK 465 SER A 114 REMARK 465 SER A 122 REMARK 465 SER A 123 REMARK 465 GLY A 124 REMARK 465 ALA A 216 REMARK 465 GLY A 217 REMARK 465 ASN A 218 REMARK 465 VAL A 219 REMARK 465 ASP A 220 REMARK 465 ASP A 251 REMARK 465 ASP A 252 REMARK 465 ASP A 253 REMARK 465 LYS A 254 REMARK 465 HIS C 498 REMARK 465 HIS C 499 REMARK 465 HIS C 500 REMARK 465 HIS C 501 REMARK 465 HIS C 502 REMARK 465 HIS C 503 REMARK 465 HIS C 504 REMARK 465 MET B 109 REMARK 465 GLY B 110 REMARK 465 SER B 111 REMARK 465 LYS B 112 REMARK 465 SER B 123 REMARK 465 GLY B 124 REMARK 465 VAL B 201 REMARK 465 ASP B 202 REMARK 465 ASP B 203 REMARK 465 SER B 204 REMARK 465 GLY B 205 REMARK 465 SER B 206 REMARK 465 THR B 207 REMARK 465 ALA B 216 REMARK 465 GLY B 217 REMARK 465 ASN B 218 REMARK 465 ASP B 251 REMARK 465 ASP B 252 REMARK 465 ASP B 253 REMARK 465 LYS B 254 REMARK 465 GLU D 493 REMARK 465 PHE D 494 REMARK 465 VAL D 495 REMARK 465 GLU D 496 REMARK 465 HIS D 497 REMARK 465 HIS D 498 REMARK 465 HIS D 499 REMARK 465 HIS D 500 REMARK 465 HIS D 501 REMARK 465 HIS D 502 REMARK 465 HIS D 503 REMARK 465 HIS D 504 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 118 CG1 CG2 CD1 REMARK 470 GLU A 119 CG CD OE1 OE2 REMARK 470 ASN A 128 CG OD1 ND2 REMARK 470 LYS A 166 CG CD CE NZ REMARK 470 ILE A 221 CG1 CG2 CD1 REMARK 470 LYS A 223 CG CD CE NZ REMARK 470 LYS C 340 CG CD CE NZ REMARK 470 GLU C 388 CG CD OE1 OE2 REMARK 470 GLU C 406 CG CD OE1 OE2 REMARK 470 ARG C 413 CG CD NE CZ NH1 NH2 REMARK 470 GLN C 431 CG CD OE1 NE2 REMARK 470 GLU B 119 CG CD OE1 OE2 REMARK 470 ASP B 121 CG OD1 OD2 REMARK 470 ILE B 157 CG1 CG2 CD1 REMARK 470 GLN B 164 CG CD OE1 NE2 REMARK 470 ARG B 165 CG CD NE CZ NH1 NH2 REMARK 470 SER B 167 OG REMARK 470 GLN B 173 CG CD OE1 NE2 REMARK 470 ASP B 175 CG OD1 OD2 REMARK 470 ASN B 179 CG OD1 ND2 REMARK 470 ARG B 186 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 192 CG OD1 ND2 REMARK 470 GLN B 198 CG CD OE1 NE2 REMARK 470 LEU B 212 CG CD1 CD2 REMARK 470 LYS B 223 CG CD CE NZ REMARK 470 LYS B 224 CG CD CE NZ REMARK 470 HIS B 227 CG ND1 CD2 CE1 NE2 REMARK 470 ASP B 229 CG OD1 OD2 REMARK 470 LYS B 234 CG CD CE NZ REMARK 470 ASN B 249 CG OD1 ND2 REMARK 470 GLU D 260 CG CD OE1 OE2 REMARK 470 LYS D 330 CG CD CE NZ REMARK 470 LYS D 340 CG CD CE NZ REMARK 470 LYS D 353 CG CD CE NZ REMARK 470 GLU D 388 CG CD OE1 OE2 REMARK 470 LYS D 390 CG CD CE NZ REMARK 470 LYS D 401 CG CD CE NZ REMARK 470 ARG D 409 CG CD NE CZ NH1 NH2 REMARK 470 ASN D 418 CG OD1 ND2 REMARK 470 GLN D 438 CG CD OE1 NE2 REMARK 470 ASN D 450 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 133 34.74 71.79 REMARK 500 LYS A 191 -124.90 49.55 REMARK 500 LYS A 223 -6.60 75.48 REMARK 500 ASN A 247 -154.61 -112.97 REMARK 500 ASN C 358 -155.51 -145.69 REMARK 500 GLU C 376 55.20 -115.53 REMARK 500 LYS C 390 7.63 58.99 REMARK 500 VAL C 415 -76.17 -117.65 REMARK 500 ASN C 433 -44.68 72.07 REMARK 500 SER C 460 -70.06 -109.99 REMARK 500 CYS B 120 -77.15 -124.30 REMARK 500 ASP B 175 11.53 58.51 REMARK 500 LYS B 191 -127.72 50.57 REMARK 500 MET D 320 73.70 -101.45 REMARK 500 ASN D 358 -159.89 -132.61 REMARK 500 VAL D 415 -74.85 -117.37 REMARK 500 ASN D 433 -45.20 69.37 REMARK 500 SER D 460 -70.32 -109.36 REMARK 500 ASN D 476 91.30 -69.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 602 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 131 O REMARK 620 2 ASP A 134 OD1 78.1 REMARK 620 3 VAL A 136 O 157.7 79.7 REMARK 620 4 ASP A 144 OD2 111.6 153.2 89.1 REMARK 620 5 GLU A 145 OE2 89.2 63.2 82.1 91.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 602 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 131 O REMARK 620 2 ASP B 134 OD1 76.5 REMARK 620 3 VAL B 136 O 161.9 85.5 REMARK 620 4 ASP B 144 OD2 113.8 147.7 81.5 REMARK 620 5 GLU B 145 OE2 92.5 68.0 80.2 80.8 REMARK 620 N 1 2 3 4 REMARK 999 REMARK 999 SEQUENCE REMARK 999 CHAINS A AND C, AS WELL AS B AND D, WERE MANIPULATED AS ONE SINGLE REMARK 999 PEPTIDE, BUT AUTO-CLEAVED AT RESIDUE 256 DURING ZYMOGEN ACTIVATION. DBREF 7Y0F A 109 254 UNP O15393 TMPS2_HUMAN 109 254 DBREF 7Y0F C 256 492 UNP O15393 TMPS2_HUMAN 256 492 DBREF 7Y0F B 109 254 UNP O15393 TMPS2_HUMAN 109 254 DBREF 7Y0F D 256 492 UNP O15393 TMPS2_HUMAN 256 492 SEQADV 7Y0F ASP A 250 UNP O15393 SER 250 ENGINEERED MUTATION SEQADV 7Y0F ASP A 251 UNP O15393 SER 251 ENGINEERED MUTATION SEQADV 7Y0F ASP A 252 UNP O15393 ARG 252 ENGINEERED MUTATION SEQADV 7Y0F ASP A 253 UNP O15393 GLN 253 ENGINEERED MUTATION SEQADV 7Y0F LYS A 254 UNP O15393 SER 254 ENGINEERED MUTATION SEQADV 7Y0F GLU C 493 UNP O15393 EXPRESSION TAG SEQADV 7Y0F PHE C 494 UNP O15393 EXPRESSION TAG SEQADV 7Y0F VAL C 495 UNP O15393 EXPRESSION TAG SEQADV 7Y0F GLU C 496 UNP O15393 EXPRESSION TAG SEQADV 7Y0F HIS C 497 UNP O15393 EXPRESSION TAG SEQADV 7Y0F HIS C 498 UNP O15393 EXPRESSION TAG SEQADV 7Y0F HIS C 499 UNP O15393 EXPRESSION TAG SEQADV 7Y0F HIS C 500 UNP O15393 EXPRESSION TAG SEQADV 7Y0F HIS C 501 UNP O15393 EXPRESSION TAG SEQADV 7Y0F HIS C 502 UNP O15393 EXPRESSION TAG SEQADV 7Y0F HIS C 503 UNP O15393 EXPRESSION TAG SEQADV 7Y0F HIS C 504 UNP O15393 EXPRESSION TAG SEQADV 7Y0F ASP B 250 UNP O15393 SER 250 ENGINEERED MUTATION SEQADV 7Y0F ASP B 251 UNP O15393 SER 251 ENGINEERED MUTATION SEQADV 7Y0F ASP B 252 UNP O15393 ARG 252 ENGINEERED MUTATION SEQADV 7Y0F ASP B 253 UNP O15393 GLN 253 ENGINEERED MUTATION SEQADV 7Y0F LYS B 254 UNP O15393 SER 254 ENGINEERED MUTATION SEQADV 7Y0F GLU D 493 UNP O15393 EXPRESSION TAG SEQADV 7Y0F PHE D 494 UNP O15393 EXPRESSION TAG SEQADV 7Y0F VAL D 495 UNP O15393 EXPRESSION TAG SEQADV 7Y0F GLU D 496 UNP O15393 EXPRESSION TAG SEQADV 7Y0F HIS D 497 UNP O15393 EXPRESSION TAG SEQADV 7Y0F HIS D 498 UNP O15393 EXPRESSION TAG SEQADV 7Y0F HIS D 499 UNP O15393 EXPRESSION TAG SEQADV 7Y0F HIS D 500 UNP O15393 EXPRESSION TAG SEQADV 7Y0F HIS D 501 UNP O15393 EXPRESSION TAG SEQADV 7Y0F HIS D 502 UNP O15393 EXPRESSION TAG SEQADV 7Y0F HIS D 503 UNP O15393 EXPRESSION TAG SEQADV 7Y0F HIS D 504 UNP O15393 EXPRESSION TAG SEQRES 1 A 146 MET GLY SER LYS CYS SER ASN SER GLY ILE GLU CYS ASP SEQRES 2 A 146 SER SER GLY THR CYS ILE ASN PRO SER ASN TRP CYS ASP SEQRES 3 A 146 GLY VAL SER HIS CYS PRO GLY GLY GLU ASP GLU ASN ARG SEQRES 4 A 146 CYS VAL ARG LEU TYR GLY PRO ASN PHE ILE LEU GLN VAL SEQRES 5 A 146 TYR SER SER GLN ARG LYS SER TRP HIS PRO VAL CYS GLN SEQRES 6 A 146 ASP ASP TRP ASN GLU ASN TYR GLY ARG ALA ALA CYS ARG SEQRES 7 A 146 ASP MET GLY TYR LYS ASN ASN PHE TYR SER SER GLN GLY SEQRES 8 A 146 ILE VAL ASP ASP SER GLY SER THR SER PHE MET LYS LEU SEQRES 9 A 146 ASN THR SER ALA GLY ASN VAL ASP ILE TYR LYS LYS LEU SEQRES 10 A 146 TYR HIS SER ASP ALA CYS SER SER LYS ALA VAL VAL SER SEQRES 11 A 146 LEU ARG CYS ILE ALA CYS GLY VAL ASN LEU ASN ASP ASP SEQRES 12 A 146 ASP ASP LYS SEQRES 1 C 249 ILE VAL GLY GLY GLU SER ALA LEU PRO GLY ALA TRP PRO SEQRES 2 C 249 TRP GLN VAL SER LEU HIS VAL GLN ASN VAL HIS VAL CYS SEQRES 3 C 249 GLY GLY SER ILE ILE THR PRO GLU TRP ILE VAL THR ALA SEQRES 4 C 249 ALA HIS CYS VAL GLU LYS PRO LEU ASN ASN PRO TRP HIS SEQRES 5 C 249 TRP THR ALA PHE ALA GLY ILE LEU ARG GLN SER PHE MET SEQRES 6 C 249 PHE TYR GLY ALA GLY TYR GLN VAL GLU LYS VAL ILE SER SEQRES 7 C 249 HIS PRO ASN TYR ASP SER LYS THR LYS ASN ASN ASP ILE SEQRES 8 C 249 ALA LEU MET LYS LEU GLN LYS PRO LEU THR PHE ASN ASP SEQRES 9 C 249 LEU VAL LYS PRO VAL CYS LEU PRO ASN PRO GLY MET MET SEQRES 10 C 249 LEU GLN PRO GLU GLN LEU CYS TRP ILE SER GLY TRP GLY SEQRES 11 C 249 ALA THR GLU GLU LYS GLY LYS THR SER GLU VAL LEU ASN SEQRES 12 C 249 ALA ALA LYS VAL LEU LEU ILE GLU THR GLN ARG CYS ASN SEQRES 13 C 249 SER ARG TYR VAL TYR ASP ASN LEU ILE THR PRO ALA MET SEQRES 14 C 249 ILE CYS ALA GLY PHE LEU GLN GLY ASN VAL ASP SER CYS SEQRES 15 C 249 GLN GLY ASP SER GLY GLY PRO LEU VAL THR SER LYS ASN SEQRES 16 C 249 ASN ILE TRP TRP LEU ILE GLY ASP THR SER TRP GLY SER SEQRES 17 C 249 GLY CYS ALA LYS ALA TYR ARG PRO GLY VAL TYR GLY ASN SEQRES 18 C 249 VAL MET VAL PHE THR ASP TRP ILE TYR ARG GLN MET ARG SEQRES 19 C 249 ALA ASP GLY GLU PHE VAL GLU HIS HIS HIS HIS HIS HIS SEQRES 20 C 249 HIS HIS SEQRES 1 B 146 MET GLY SER LYS CYS SER ASN SER GLY ILE GLU CYS ASP SEQRES 2 B 146 SER SER GLY THR CYS ILE ASN PRO SER ASN TRP CYS ASP SEQRES 3 B 146 GLY VAL SER HIS CYS PRO GLY GLY GLU ASP GLU ASN ARG SEQRES 4 B 146 CYS VAL ARG LEU TYR GLY PRO ASN PHE ILE LEU GLN VAL SEQRES 5 B 146 TYR SER SER GLN ARG LYS SER TRP HIS PRO VAL CYS GLN SEQRES 6 B 146 ASP ASP TRP ASN GLU ASN TYR GLY ARG ALA ALA CYS ARG SEQRES 7 B 146 ASP MET GLY TYR LYS ASN ASN PHE TYR SER SER GLN GLY SEQRES 8 B 146 ILE VAL ASP ASP SER GLY SER THR SER PHE MET LYS LEU SEQRES 9 B 146 ASN THR SER ALA GLY ASN VAL ASP ILE TYR LYS LYS LEU SEQRES 10 B 146 TYR HIS SER ASP ALA CYS SER SER LYS ALA VAL VAL SER SEQRES 11 B 146 LEU ARG CYS ILE ALA CYS GLY VAL ASN LEU ASN ASP ASP SEQRES 12 B 146 ASP ASP LYS SEQRES 1 D 249 ILE VAL GLY GLY GLU SER ALA LEU PRO GLY ALA TRP PRO SEQRES 2 D 249 TRP GLN VAL SER LEU HIS VAL GLN ASN VAL HIS VAL CYS SEQRES 3 D 249 GLY GLY SER ILE ILE THR PRO GLU TRP ILE VAL THR ALA SEQRES 4 D 249 ALA HIS CYS VAL GLU LYS PRO LEU ASN ASN PRO TRP HIS SEQRES 5 D 249 TRP THR ALA PHE ALA GLY ILE LEU ARG GLN SER PHE MET SEQRES 6 D 249 PHE TYR GLY ALA GLY TYR GLN VAL GLU LYS VAL ILE SER SEQRES 7 D 249 HIS PRO ASN TYR ASP SER LYS THR LYS ASN ASN ASP ILE SEQRES 8 D 249 ALA LEU MET LYS LEU GLN LYS PRO LEU THR PHE ASN ASP SEQRES 9 D 249 LEU VAL LYS PRO VAL CYS LEU PRO ASN PRO GLY MET MET SEQRES 10 D 249 LEU GLN PRO GLU GLN LEU CYS TRP ILE SER GLY TRP GLY SEQRES 11 D 249 ALA THR GLU GLU LYS GLY LYS THR SER GLU VAL LEU ASN SEQRES 12 D 249 ALA ALA LYS VAL LEU LEU ILE GLU THR GLN ARG CYS ASN SEQRES 13 D 249 SER ARG TYR VAL TYR ASP ASN LEU ILE THR PRO ALA MET SEQRES 14 D 249 ILE CYS ALA GLY PHE LEU GLN GLY ASN VAL ASP SER CYS SEQRES 15 D 249 GLN GLY ASP SER GLY GLY PRO LEU VAL THR SER LYS ASN SEQRES 16 D 249 ASN ILE TRP TRP LEU ILE GLY ASP THR SER TRP GLY SER SEQRES 17 D 249 GLY CYS ALA LYS ALA TYR ARG PRO GLY VAL TYR GLY ASN SEQRES 18 D 249 VAL MET VAL PHE THR ASP TRP ILE TYR ARG GLN MET ARG SEQRES 19 D 249 ALA ASP GLY GLU PHE VAL GLU HIS HIS HIS HIS HIS HIS SEQRES 20 D 249 HIS HIS HET NAG A 601 14 HET CA A 602 1 HET I9V C 601 25 HET NAG B 601 14 HET CA B 602 1 HET I9V D 601 25 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CA CALCIUM ION HETNAM I9V 2-[(1-CARBAMIMIDAMIDO-4-CHLORANYL-ISOQUINOLIN-7-YL) HETNAM 2 I9V SULFONYLAMINO]-2-METHYL-PROPANOIC ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN I9V UK-371804 FORMUL 5 NAG 2(C8 H15 N O6) FORMUL 6 CA 2(CA 2+) FORMUL 7 I9V 2(C14 H16 CL N5 O4 S) FORMUL 11 HOH *92(H2 O) HELIX 1 AA1 GLY A 142 ARG A 147 1 6 HELIX 2 AA2 ASN A 177 MET A 188 1 12 HELIX 3 AA3 ASN C 304 HIS C 307 5 4 HELIX 4 AA4 ARG C 316 MET C 320 5 5 HELIX 5 AA5 GLU C 406 ASN C 411 1 6 HELIX 6 AA6 VAL C 477 HIS C 497 1 21 HELIX 7 AA7 CYS B 113 GLY B 117 5 5 HELIX 8 AA8 GLY B 142 ARG B 147 1 6 HELIX 9 AA9 ASN B 177 MET B 188 1 12 HELIX 10 AB1 ASP B 220 LYS B 223 5 4 HELIX 11 AB2 ASN D 304 HIS D 307 5 4 HELIX 12 AB3 ARG D 316 MET D 320 5 5 HELIX 13 AB4 GLU D 406 ASN D 411 1 6 HELIX 14 AB5 VAL D 477 GLY D 492 1 16 SHEET 1 AA1 2 ILE A 118 GLU A 119 0 SHEET 2 AA1 2 CYS A 126 ILE A 127 -1 O ILE A 127 N ILE A 118 SHEET 1 AA2 3 VAL A 149 TYR A 152 0 SHEET 2 AA2 3 ILE A 157 SER A 162 -1 O GLN A 159 N ARG A 150 SHEET 3 AA2 3 SER A 167 PRO A 170 -1 O SER A 167 N SER A 162 SHEET 1 AA3 2 SER A 196 ILE A 200 0 SHEET 2 AA3 2 VAL A 236 ARG A 240 -1 O ARG A 240 N SER A 196 SHEET 1 AA4 2 PHE A 209 LEU A 212 0 SHEET 2 AA4 2 LEU A 225 SER A 228 -1 O SER A 228 N PHE A 209 SHEET 1 AA5 8 GLU C 260 SER C 261 0 SHEET 2 AA5 8 ASN C 398 ILE C 405 -1 O ALA C 399 N GLU C 260 SHEET 3 AA5 8 MET C 424 GLY C 428 -1 O CYS C 426 N ILE C 405 SHEET 4 AA5 8 GLY C 472 ASN C 476 -1 O TYR C 474 N ILE C 425 SHEET 5 AA5 8 ILE C 452 TRP C 461 -1 N TRP C 461 O VAL C 473 SHEET 6 AA5 8 PRO C 444 LYS C 449 -1 N LEU C 445 O GLY C 457 SHEET 7 AA5 8 LEU C 378 GLY C 383 -1 N TRP C 380 O VAL C 446 SHEET 8 AA5 8 ASN C 398 ILE C 405 -1 O VAL C 402 N CYS C 379 SHEET 1 AA6 7 GLN C 270 VAL C 275 0 SHEET 2 AA6 7 VAL C 278 ILE C 285 -1 O CYS C 281 N LEU C 273 SHEET 3 AA6 7 TRP C 290 THR C 293 -1 O VAL C 292 N SER C 284 SHEET 4 AA6 7 ALA C 347 LEU C 351 -1 O ALA C 347 N THR C 293 SHEET 5 AA6 7 TYR C 326 SER C 333 -1 N LYS C 330 O LYS C 350 SHEET 6 AA6 7 THR C 309 ALA C 312 -1 N ALA C 310 O TYR C 326 SHEET 7 AA6 7 GLN C 270 VAL C 275 -1 N HIS C 274 O THR C 309 SHEET 1 AA7 2 ILE B 118 GLU B 119 0 SHEET 2 AA7 2 CYS B 126 ILE B 127 -1 O ILE B 127 N ILE B 118 SHEET 1 AA8 3 VAL B 149 TYR B 152 0 SHEET 2 AA8 3 ILE B 157 SER B 162 -1 O GLN B 159 N ARG B 150 SHEET 3 AA8 3 SER B 167 PRO B 170 -1 O SER B 167 N SER B 162 SHEET 1 AA9 2 SER B 196 GLY B 199 0 SHEET 2 AA9 2 VAL B 237 ARG B 240 -1 O ARG B 240 N SER B 196 SHEET 1 AB1 2 PHE B 209 LEU B 212 0 SHEET 2 AB1 2 LEU B 225 SER B 228 -1 O SER B 228 N PHE B 209 SHEET 1 AB2 8 GLU D 260 SER D 261 0 SHEET 2 AB2 8 ASN D 398 ILE D 405 -1 O ALA D 399 N GLU D 260 SHEET 3 AB2 8 MET D 424 GLY D 428 -1 O CYS D 426 N ILE D 405 SHEET 4 AB2 8 GLY D 472 ASN D 476 -1 O TYR D 474 N ILE D 425 SHEET 5 AB2 8 ILE D 452 TRP D 461 -1 N TRP D 461 O VAL D 473 SHEET 6 AB2 8 PRO D 444 LYS D 449 -1 N LEU D 445 O GLY D 457 SHEET 7 AB2 8 LEU D 378 GLY D 383 -1 N TRP D 380 O VAL D 446 SHEET 8 AB2 8 ASN D 398 ILE D 405 -1 O VAL D 402 N CYS D 379 SHEET 1 AB3 7 GLN D 270 VAL D 275 0 SHEET 2 AB3 7 VAL D 278 ILE D 285 -1 O CYS D 281 N LEU D 273 SHEET 3 AB3 7 TRP D 290 THR D 293 -1 O VAL D 292 N SER D 284 SHEET 4 AB3 7 ALA D 347 LEU D 351 -1 O ALA D 347 N THR D 293 SHEET 5 AB3 7 TYR D 326 SER D 333 -1 N ILE D 332 O LEU D 348 SHEET 6 AB3 7 THR D 309 ALA D 312 -1 N ALA D 310 O TYR D 326 SHEET 7 AB3 7 GLN D 270 VAL D 275 -1 N HIS D 274 O THR D 309 SSBOND 1 CYS A 120 CYS A 139 1555 1555 2.04 SSBOND 2 CYS A 133 CYS A 148 1555 1555 2.00 SSBOND 3 CYS A 172 CYS A 231 1555 1555 2.01 SSBOND 4 CYS A 185 CYS A 241 1555 1555 2.03 SSBOND 5 CYS A 244 CYS C 365 1555 1555 2.03 SSBOND 6 CYS C 281 CYS C 297 1555 1555 2.02 SSBOND 7 CYS C 410 CYS C 426 1555 1555 2.04 SSBOND 8 CYS C 437 CYS C 465 1555 1555 2.03 SSBOND 9 CYS B 113 CYS B 126 1555 1555 2.03 SSBOND 10 CYS B 120 CYS B 139 1555 1555 2.03 SSBOND 11 CYS B 133 CYS B 148 1555 1555 2.03 SSBOND 12 CYS B 172 CYS B 231 1555 1555 2.05 SSBOND 13 CYS B 185 CYS B 241 1555 1555 2.03 SSBOND 14 CYS B 244 CYS D 365 1555 1555 2.03 SSBOND 15 CYS D 281 CYS D 297 1555 1555 1.99 SSBOND 16 CYS D 410 CYS D 426 1555 1555 2.03 SSBOND 17 CYS D 437 CYS D 465 1555 1555 2.03 LINK ND2 ASN A 213 C1 NAG A 601 1555 1555 1.45 LINK ND2 ASN B 213 C1 NAG B 601 1555 1555 1.45 LINK O ASN A 131 CA CA A 602 1555 1555 2.25 LINK OD1 ASP A 134 CA CA A 602 1555 1555 2.64 LINK O VAL A 136 CA CA A 602 1555 1555 2.30 LINK OD2 ASP A 144 CA CA A 602 1555 1555 2.30 LINK OE2 GLU A 145 CA CA A 602 1555 1555 2.83 LINK O ASN B 131 CA CA B 602 1555 1555 2.27 LINK OD1 ASP B 134 CA CA B 602 1555 1555 2.44 LINK O VAL B 136 CA CA B 602 1555 1555 2.25 LINK OD2 ASP B 144 CA CA B 602 1555 1555 2.41 LINK OE2 GLU B 145 CA CA B 602 1555 1555 2.61 CISPEP 1 LYS C 300 PRO C 301 0 9.81 CISPEP 2 LYS D 300 PRO D 301 0 10.78 CRYST1 48.045 91.208 90.696 90.00 100.44 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020814 0.000000 0.003835 0.00000 SCALE2 0.000000 0.010964 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011211 0.00000