HEADER MEMBRANE PROTEIN 18-JUN-22 7Y67 TITLE CRYO-EM STRUCTURE OF C089-BOUND C5AR1(I116A) MUTANT IN COMPLEX WITH GI TITLE 2 PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(I) SUBUNIT ALPHA-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ADENYLATE CYCLASE-INHIBITING G ALPHA PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(I)/G(S)/G(T) SUBUNIT COMPND 8 BETA-1; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: TRANSDUCIN BETA CHAIN 1; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(I)/G(S)/G(O) SUBUNIT COMPND 14 GAMMA-2; COMPND 15 CHAIN: C; COMPND 16 SYNONYM: G GAMMA-I; COMPND 17 ENGINEERED: YES; COMPND 18 MOL_ID: 4; COMPND 19 MOLECULE: C5A ANAPHYLATOXIN CHEMOTACTIC RECEPTOR 1; COMPND 20 CHAIN: D; COMPND 21 SYNONYM: C5A ANAPHYLATOXIN CHEMOTACTIC RECEPTOR,C5A-R,C5AR; COMPND 22 ENGINEERED: YES; COMPND 23 MUTATION: YES; COMPND 24 MOL_ID: 5; COMPND 25 MOLECULE: SCFV16; COMPND 26 CHAIN: S; COMPND 27 ENGINEERED: YES; COMPND 28 MOL_ID: 6; COMPND 29 MOLECULE: C089 PEPTIDE; COMPND 30 CHAIN: L; COMPND 31 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GNAI1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: GNB1; SOURCE 13 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 GENE: GNG2; SOURCE 20 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 22 MOL_ID: 4; SOURCE 23 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 24 ORGANISM_COMMON: HUMAN; SOURCE 25 ORGANISM_TAXID: 9606; SOURCE 26 GENE: C5AR1, C5AR, C5R1; SOURCE 27 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 29 MOL_ID: 5; SOURCE 30 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 31 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 32 ORGANISM_TAXID: 10090; SOURCE 33 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 34 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 35 MOL_ID: 6; SOURCE 36 SYNTHETIC: YES; SOURCE 37 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 38 ORGANISM_TAXID: 32630 KEYWDS COMPLEX, AGONIST, MEMBRANE PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR Y.Y.FENG,C.ZHAO,W.YAN,Z.H.SHAO REVDAT 3 19-APR-23 7Y67 1 JRNL REVDAT 2 08-MAR-23 7Y67 1 JRNL REVDAT 1 01-MAR-23 7Y67 0 JRNL AUTH Y.FENG,C.ZHAO,Y.DENG,H.WANG,L.MA,S.LIU,X.TIAN,B.WANG,Y.BIN, JRNL AUTH 2 P.CHEN,W.YAN,P.FU,Z.SHAO JRNL TITL MECHANISM OF ACTIVATION AND BIASED SIGNALING IN COMPLEMENT JRNL TITL 2 RECEPTOR C5AR1. JRNL REF CELL RES. V. 33 312 2023 JRNL REFN ISSN 1001-0602 JRNL PMID 36806352 JRNL DOI 10.1038/S41422-023-00779-2 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.800 REMARK 3 NUMBER OF PARTICLES : 298883 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7Y67 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1300029918. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : C089-BOUND C5AR1-I116A IN REMARK 245 COMPLEX WITH GI HETEROTRIMER; REMARK 245 GI HETEROTRIMER; C089-BOUND REMARK 245 C5AR1; SCFV16 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1800.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6300.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, S, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 CYS A 3 REMARK 465 ILE A 56 REMARK 465 HIS A 57 REMARK 465 GLU A 58 REMARK 465 ALA A 59 REMARK 465 GLY A 60 REMARK 465 TYR A 61 REMARK 465 SER A 62 REMARK 465 GLU A 63 REMARK 465 GLU A 64 REMARK 465 GLU A 65 REMARK 465 CYS A 66 REMARK 465 LYS A 67 REMARK 465 GLN A 68 REMARK 465 TYR A 69 REMARK 465 LYS A 70 REMARK 465 ALA A 71 REMARK 465 VAL A 72 REMARK 465 VAL A 73 REMARK 465 TYR A 74 REMARK 465 SER A 75 REMARK 465 ASN A 76 REMARK 465 THR A 77 REMARK 465 ILE A 78 REMARK 465 GLN A 79 REMARK 465 SER A 80 REMARK 465 ILE A 81 REMARK 465 ILE A 82 REMARK 465 ALA A 83 REMARK 465 ILE A 84 REMARK 465 ILE A 85 REMARK 465 ARG A 86 REMARK 465 ALA A 87 REMARK 465 MET A 88 REMARK 465 GLY A 89 REMARK 465 ARG A 90 REMARK 465 LEU A 91 REMARK 465 LYS A 92 REMARK 465 ILE A 93 REMARK 465 ASP A 94 REMARK 465 PHE A 95 REMARK 465 GLY A 96 REMARK 465 ASP A 97 REMARK 465 SER A 98 REMARK 465 ALA A 99 REMARK 465 ARG A 100 REMARK 465 ALA A 101 REMARK 465 ASP A 102 REMARK 465 ASP A 103 REMARK 465 ALA A 104 REMARK 465 ARG A 105 REMARK 465 GLN A 106 REMARK 465 LEU A 107 REMARK 465 PHE A 108 REMARK 465 VAL A 109 REMARK 465 LEU A 110 REMARK 465 ALA A 111 REMARK 465 GLY A 112 REMARK 465 ALA A 113 REMARK 465 ALA A 114 REMARK 465 GLU A 115 REMARK 465 GLU A 116 REMARK 465 GLY A 117 REMARK 465 PHE A 118 REMARK 465 MET A 119 REMARK 465 THR A 120 REMARK 465 ALA A 121 REMARK 465 GLU A 122 REMARK 465 LEU A 123 REMARK 465 ALA A 124 REMARK 465 GLY A 125 REMARK 465 VAL A 126 REMARK 465 ILE A 127 REMARK 465 LYS A 128 REMARK 465 ARG A 129 REMARK 465 LEU A 130 REMARK 465 TRP A 131 REMARK 465 LYS A 132 REMARK 465 ASP A 133 REMARK 465 SER A 134 REMARK 465 GLY A 135 REMARK 465 VAL A 136 REMARK 465 GLN A 137 REMARK 465 ALA A 138 REMARK 465 CYS A 139 REMARK 465 PHE A 140 REMARK 465 ASN A 141 REMARK 465 ARG A 142 REMARK 465 SER A 143 REMARK 465 ARG A 144 REMARK 465 GLU A 145 REMARK 465 TYR A 146 REMARK 465 GLN A 147 REMARK 465 LEU A 148 REMARK 465 ASN A 149 REMARK 465 ASP A 150 REMARK 465 SER A 151 REMARK 465 ALA A 152 REMARK 465 ALA A 153 REMARK 465 TYR A 154 REMARK 465 TYR A 155 REMARK 465 LEU A 156 REMARK 465 ASN A 157 REMARK 465 ASP A 158 REMARK 465 LEU A 159 REMARK 465 ASP A 160 REMARK 465 ARG A 161 REMARK 465 ILE A 162 REMARK 465 ALA A 163 REMARK 465 GLN A 164 REMARK 465 PRO A 165 REMARK 465 ASN A 166 REMARK 465 TYR A 167 REMARK 465 ILE A 168 REMARK 465 PRO A 169 REMARK 465 THR A 170 REMARK 465 GLN A 171 REMARK 465 GLN A 172 REMARK 465 ASP A 173 REMARK 465 VAL A 174 REMARK 465 LEU A 175 REMARK 465 ARG A 176 REMARK 465 THR A 177 REMARK 465 ARG A 178 REMARK 465 VAL A 179 REMARK 465 LYS A 180 REMARK 465 THR A 181 REMARK 465 THR A 182 REMARK 465 MET B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 LEU B -10 REMARK 465 GLU B -9 REMARK 465 VAL B -8 REMARK 465 LEU B -7 REMARK 465 PHE B -6 REMARK 465 GLN B -5 REMARK 465 GLY B -4 REMARK 465 PRO B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 SER B 0 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 SER C 3 REMARK 465 ASN C 4 REMARK 465 ASN C 5 REMARK 465 GLU C 63 REMARK 465 LYS C 64 REMARK 465 LYS C 65 REMARK 465 PHE C 66 REMARK 465 PHE C 67 REMARK 465 CYS C 68 REMARK 465 ALA C 69 REMARK 465 ILE C 70 REMARK 465 LEU C 71 REMARK 465 MET D 1 REMARK 465 ASP D 2 REMARK 465 SER D 3 REMARK 465 PHE D 4 REMARK 465 ASN D 5 REMARK 465 TYR D 6 REMARK 465 THR D 7 REMARK 465 THR D 8 REMARK 465 PRO D 9 REMARK 465 ASP D 10 REMARK 465 TYR D 11 REMARK 465 GLY D 12 REMARK 465 HIS D 13 REMARK 465 TYR D 14 REMARK 465 ASP D 15 REMARK 465 ASP D 16 REMARK 465 LYS D 17 REMARK 465 ASP D 18 REMARK 465 THR D 19 REMARK 465 LEU D 20 REMARK 465 ASP D 21 REMARK 465 LEU D 22 REMARK 465 ASN D 23 REMARK 465 THR D 24 REMARK 465 PRO D 25 REMARK 465 VAL D 26 REMARK 465 ASP D 27 REMARK 465 LYS D 28 REMARK 465 THR D 29 REMARK 465 SER D 30 REMARK 465 ASN D 31 REMARK 465 TYR D 181 REMARK 465 PHE D 182 REMARK 465 PRO D 183 REMARK 465 PRO D 184 REMARK 465 LYS D 185 REMARK 465 LEU D 315 REMARK 465 PRO D 316 REMARK 465 SER D 317 REMARK 465 LEU D 318 REMARK 465 LEU D 319 REMARK 465 ARG D 320 REMARK 465 ASN D 321 REMARK 465 VAL D 322 REMARK 465 LEU D 323 REMARK 465 THR D 324 REMARK 465 GLU D 325 REMARK 465 GLU D 326 REMARK 465 SER D 327 REMARK 465 VAL D 328 REMARK 465 VAL D 329 REMARK 465 ARG D 330 REMARK 465 HIS D 331 REMARK 465 HIS D 332 REMARK 465 HIS D 333 REMARK 465 HIS D 334 REMARK 465 HIS D 335 REMARK 465 HIS D 336 REMARK 465 HIS D 337 REMARK 465 HIS D 338 REMARK 465 HIS D 339 REMARK 465 MET S 0 REMARK 465 ASP S 1 REMARK 465 SER S 121 REMARK 465 GLY S 122 REMARK 465 GLY S 123 REMARK 465 GLY S 124 REMARK 465 GLY S 125 REMARK 465 SER S 126 REMARK 465 GLY S 127 REMARK 465 GLY S 128 REMARK 465 GLY S 129 REMARK 465 GLY S 130 REMARK 465 SER S 131 REMARK 465 GLY S 132 REMARK 465 GLY S 133 REMARK 465 GLY S 134 REMARK 465 GLY S 135 REMARK 465 LYS S 248 REMARK 465 ALA S 249 REMARK 465 ALA S 250 REMARK 465 ALA S 251 REMARK 465 GLU S 252 REMARK 465 ASN S 253 REMARK 465 LEU S 254 REMARK 465 TYR S 255 REMARK 465 PHE S 256 REMARK 465 GLN S 257 REMARK 465 GLY S 258 REMARK 465 HIS S 259 REMARK 465 HIS S 260 REMARK 465 HIS S 261 REMARK 465 HIS S 262 REMARK 465 HIS S 263 REMARK 465 HIS S 264 REMARK 465 HIS S 265 REMARK 465 HIS S 266 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 238 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MEA L 1 CA - C - N ANGL. DEV. = 23.3 DEGREES REMARK 500 MEA L 1 O - C - N ANGL. DEV. = -22.8 DEGREES REMARK 500 LYS L 2 C - N - CA ANGL. DEV. = 21.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 255 32.64 -98.60 REMARK 500 GLU A 289 34.79 -99.20 REMARK 500 LEU B 117 18.87 54.70 REMARK 500 ILE D 111 -56.08 -125.26 REMARK 500 HIS D 194 -0.49 66.67 REMARK 500 VAL S 48 -62.47 -122.43 REMARK 500 ASP S 90 51.44 -93.07 REMARK 500 ALA S 92 -168.76 -168.11 REMARK 500 MET S 192 2.68 57.41 REMARK 500 HIS S 232 28.53 -141.45 REMARK 500 TRP L 5 -140.12 -62.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-33636 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF HUMAN RECEPTOR R1 DBREF 7Y67 A 1 354 UNP P63096 GNAI1_HUMAN 1 354 DBREF 7Y67 B 2 340 UNP P62873 GBB1_HUMAN 2 340 DBREF 7Y67 C 1 71 UNP P59768 GBG2_HUMAN 1 71 DBREF 7Y67 D 1 330 UNP P21730 C5AR1_HUMAN 1 330 DBREF 7Y67 S 0 266 PDB 7Y67 7Y67 0 266 DBREF 7Y67 L 1 6 PDB 7Y67 7Y67 1 6 SEQADV 7Y67 ASN A 47 UNP P63096 SER 47 CONFLICT SEQADV 7Y67 ALA A 203 UNP P63096 GLY 203 CONFLICT SEQADV 7Y67 ALA A 245 UNP P63096 GLU 245 CONFLICT SEQADV 7Y67 SER A 326 UNP P63096 ALA 326 CONFLICT SEQADV 7Y67 MET B -15 UNP P62873 INITIATING METHIONINE SEQADV 7Y67 HIS B -14 UNP P62873 EXPRESSION TAG SEQADV 7Y67 HIS B -13 UNP P62873 EXPRESSION TAG SEQADV 7Y67 HIS B -12 UNP P62873 EXPRESSION TAG SEQADV 7Y67 HIS B -11 UNP P62873 EXPRESSION TAG SEQADV 7Y67 LEU B -10 UNP P62873 EXPRESSION TAG SEQADV 7Y67 GLU B -9 UNP P62873 EXPRESSION TAG SEQADV 7Y67 VAL B -8 UNP P62873 EXPRESSION TAG SEQADV 7Y67 LEU B -7 UNP P62873 EXPRESSION TAG SEQADV 7Y67 PHE B -6 UNP P62873 EXPRESSION TAG SEQADV 7Y67 GLN B -5 UNP P62873 EXPRESSION TAG SEQADV 7Y67 GLY B -4 UNP P62873 EXPRESSION TAG SEQADV 7Y67 PRO B -3 UNP P62873 EXPRESSION TAG SEQADV 7Y67 GLY B -2 UNP P62873 EXPRESSION TAG SEQADV 7Y67 SER B -1 UNP P62873 EXPRESSION TAG SEQADV 7Y67 SER B 0 UNP P62873 EXPRESSION TAG SEQADV 7Y67 GLY B 1 UNP P62873 EXPRESSION TAG SEQADV 7Y67 ALA D 116 UNP P21730 ILE 116 ENGINEERED MUTATION SEQADV 7Y67 HIS D 331 UNP P21730 EXPRESSION TAG SEQADV 7Y67 HIS D 332 UNP P21730 EXPRESSION TAG SEQADV 7Y67 HIS D 333 UNP P21730 EXPRESSION TAG SEQADV 7Y67 HIS D 334 UNP P21730 EXPRESSION TAG SEQADV 7Y67 HIS D 335 UNP P21730 EXPRESSION TAG SEQADV 7Y67 HIS D 336 UNP P21730 EXPRESSION TAG SEQADV 7Y67 HIS D 337 UNP P21730 EXPRESSION TAG SEQADV 7Y67 HIS D 338 UNP P21730 EXPRESSION TAG SEQADV 7Y67 HIS D 339 UNP P21730 EXPRESSION TAG SEQRES 1 A 354 MET GLY CYS THR LEU SER ALA GLU ASP LYS ALA ALA VAL SEQRES 2 A 354 GLU ARG SER LYS MET ILE ASP ARG ASN LEU ARG GLU ASP SEQRES 3 A 354 GLY GLU LYS ALA ALA ARG GLU VAL LYS LEU LEU LEU LEU SEQRES 4 A 354 GLY ALA GLY GLU SER GLY LYS ASN THR ILE VAL LYS GLN SEQRES 5 A 354 MET LYS ILE ILE HIS GLU ALA GLY TYR SER GLU GLU GLU SEQRES 6 A 354 CYS LYS GLN TYR LYS ALA VAL VAL TYR SER ASN THR ILE SEQRES 7 A 354 GLN SER ILE ILE ALA ILE ILE ARG ALA MET GLY ARG LEU SEQRES 8 A 354 LYS ILE ASP PHE GLY ASP SER ALA ARG ALA ASP ASP ALA SEQRES 9 A 354 ARG GLN LEU PHE VAL LEU ALA GLY ALA ALA GLU GLU GLY SEQRES 10 A 354 PHE MET THR ALA GLU LEU ALA GLY VAL ILE LYS ARG LEU SEQRES 11 A 354 TRP LYS ASP SER GLY VAL GLN ALA CYS PHE ASN ARG SER SEQRES 12 A 354 ARG GLU TYR GLN LEU ASN ASP SER ALA ALA TYR TYR LEU SEQRES 13 A 354 ASN ASP LEU ASP ARG ILE ALA GLN PRO ASN TYR ILE PRO SEQRES 14 A 354 THR GLN GLN ASP VAL LEU ARG THR ARG VAL LYS THR THR SEQRES 15 A 354 GLY ILE VAL GLU THR HIS PHE THR PHE LYS ASP LEU HIS SEQRES 16 A 354 PHE LYS MET PHE ASP VAL GLY ALA GLN ARG SER GLU ARG SEQRES 17 A 354 LYS LYS TRP ILE HIS CYS PHE GLU GLY VAL THR ALA ILE SEQRES 18 A 354 ILE PHE CYS VAL ALA LEU SER ASP TYR ASP LEU VAL LEU SEQRES 19 A 354 ALA GLU ASP GLU GLU MET ASN ARG MET HIS ALA SER MET SEQRES 20 A 354 LYS LEU PHE ASP SER ILE CYS ASN ASN LYS TRP PHE THR SEQRES 21 A 354 ASP THR SER ILE ILE LEU PHE LEU ASN LYS LYS ASP LEU SEQRES 22 A 354 PHE GLU GLU LYS ILE LYS LYS SER PRO LEU THR ILE CYS SEQRES 23 A 354 TYR PRO GLU TYR ALA GLY SER ASN THR TYR GLU GLU ALA SEQRES 24 A 354 ALA ALA TYR ILE GLN CYS GLN PHE GLU ASP LEU ASN LYS SEQRES 25 A 354 ARG LYS ASP THR LYS GLU ILE TYR THR HIS PHE THR CYS SEQRES 26 A 354 SER THR ASP THR LYS ASN VAL GLN PHE VAL PHE ASP ALA SEQRES 27 A 354 VAL THR ASP VAL ILE ILE LYS ASN ASN LEU LYS ASP CYS SEQRES 28 A 354 GLY LEU PHE SEQRES 1 B 356 MET HIS HIS HIS HIS LEU GLU VAL LEU PHE GLN GLY PRO SEQRES 2 B 356 GLY SER SER GLY SER GLU LEU ASP GLN LEU ARG GLN GLU SEQRES 3 B 356 ALA GLU GLN LEU LYS ASN GLN ILE ARG ASP ALA ARG LYS SEQRES 4 B 356 ALA CYS ALA ASP ALA THR LEU SER GLN ILE THR ASN ASN SEQRES 5 B 356 ILE ASP PRO VAL GLY ARG ILE GLN MET ARG THR ARG ARG SEQRES 6 B 356 THR LEU ARG GLY HIS LEU ALA LYS ILE TYR ALA MET HIS SEQRES 7 B 356 TRP GLY THR ASP SER ARG LEU LEU VAL SER ALA SER GLN SEQRES 8 B 356 ASP GLY LYS LEU ILE ILE TRP ASP SER TYR THR THR ASN SEQRES 9 B 356 LYS VAL HIS ALA ILE PRO LEU ARG SER SER TRP VAL MET SEQRES 10 B 356 THR CYS ALA TYR ALA PRO SER GLY ASN TYR VAL ALA CYS SEQRES 11 B 356 GLY GLY LEU ASP ASN ILE CYS SER ILE TYR ASN LEU LYS SEQRES 12 B 356 THR ARG GLU GLY ASN VAL ARG VAL SER ARG GLU LEU ALA SEQRES 13 B 356 GLY HIS THR GLY TYR LEU SER CYS CYS ARG PHE LEU ASP SEQRES 14 B 356 ASP ASN GLN ILE VAL THR SER SER GLY ASP THR THR CYS SEQRES 15 B 356 ALA LEU TRP ASP ILE GLU THR GLY GLN GLN THR THR THR SEQRES 16 B 356 PHE THR GLY HIS THR GLY ASP VAL MET SER LEU SER LEU SEQRES 17 B 356 ALA PRO ASP THR ARG LEU PHE VAL SER GLY ALA CYS ASP SEQRES 18 B 356 ALA SER ALA LYS LEU TRP ASP VAL ARG GLU GLY MET CYS SEQRES 19 B 356 ARG GLN THR PHE THR GLY HIS GLU SER ASP ILE ASN ALA SEQRES 20 B 356 ILE CYS PHE PHE PRO ASN GLY ASN ALA PHE ALA THR GLY SEQRES 21 B 356 SER ASP ASP ALA THR CYS ARG LEU PHE ASP LEU ARG ALA SEQRES 22 B 356 ASP GLN GLU LEU MET THR TYR SER HIS ASP ASN ILE ILE SEQRES 23 B 356 CYS GLY ILE THR SER VAL SER PHE SER LYS SER GLY ARG SEQRES 24 B 356 LEU LEU LEU ALA GLY TYR ASP ASP PHE ASN CYS ASN VAL SEQRES 25 B 356 TRP ASP ALA LEU LYS ALA ASP ARG ALA GLY VAL LEU ALA SEQRES 26 B 356 GLY HIS ASP ASN ARG VAL SER CYS LEU GLY VAL THR ASP SEQRES 27 B 356 ASP GLY MET ALA VAL ALA THR GLY SER TRP ASP SER PHE SEQRES 28 B 356 LEU LYS ILE TRP ASN SEQRES 1 C 71 MET ALA SER ASN ASN THR ALA SER ILE ALA GLN ALA ARG SEQRES 2 C 71 LYS LEU VAL GLU GLN LEU LYS MET GLU ALA ASN ILE ASP SEQRES 3 C 71 ARG ILE LYS VAL SER LYS ALA ALA ALA ASP LEU MET ALA SEQRES 4 C 71 TYR CYS GLU ALA HIS ALA LYS GLU ASP PRO LEU LEU THR SEQRES 5 C 71 PRO VAL PRO ALA SER GLU ASN PRO PHE ARG GLU LYS LYS SEQRES 6 C 71 PHE PHE CYS ALA ILE LEU SEQRES 1 D 339 MET ASP SER PHE ASN TYR THR THR PRO ASP TYR GLY HIS SEQRES 2 D 339 TYR ASP ASP LYS ASP THR LEU ASP LEU ASN THR PRO VAL SEQRES 3 D 339 ASP LYS THR SER ASN THR LEU ARG VAL PRO ASP ILE LEU SEQRES 4 D 339 ALA LEU VAL ILE PHE ALA VAL VAL PHE LEU VAL GLY VAL SEQRES 5 D 339 LEU GLY ASN ALA LEU VAL VAL TRP VAL THR ALA PHE GLU SEQRES 6 D 339 ALA LYS ARG THR ILE ASN ALA ILE TRP PHE LEU ASN LEU SEQRES 7 D 339 ALA VAL ALA ASP PHE LEU SER CYS LEU ALA LEU PRO ILE SEQRES 8 D 339 LEU PHE THR SER ILE VAL GLN HIS HIS HIS TRP PRO PHE SEQRES 9 D 339 GLY GLY ALA ALA CYS SER ILE LEU PRO SER LEU ALA LEU SEQRES 10 D 339 LEU ASN MET TYR ALA SER ILE LEU LEU LEU ALA THR ILE SEQRES 11 D 339 SER ALA ASP ARG PHE LEU LEU VAL PHE LYS PRO ILE TRP SEQRES 12 D 339 CYS GLN ASN PHE ARG GLY ALA GLY LEU ALA TRP ILE ALA SEQRES 13 D 339 CYS ALA VAL ALA TRP GLY LEU ALA LEU LEU LEU THR ILE SEQRES 14 D 339 PRO SER PHE LEU TYR ARG VAL VAL ARG GLU GLU TYR PHE SEQRES 15 D 339 PRO PRO LYS VAL LEU CYS GLY VAL ASP TYR SER HIS ASP SEQRES 16 D 339 LYS ARG ARG GLU ARG ALA VAL ALA ILE VAL ARG LEU VAL SEQRES 17 D 339 LEU GLY PHE LEU TRP PRO LEU LEU THR LEU THR ILE CYS SEQRES 18 D 339 TYR THR PHE ILE LEU LEU ARG THR TRP SER ARG ARG ALA SEQRES 19 D 339 THR ARG SER THR LYS THR LEU LYS VAL VAL VAL ALA VAL SEQRES 20 D 339 VAL ALA SER PHE PHE ILE PHE TRP LEU PRO TYR GLN VAL SEQRES 21 D 339 THR GLY ILE MET MET SER PHE LEU GLU PRO SER SER PRO SEQRES 22 D 339 THR PHE LEU LEU LEU LYS LYS LEU ASP SER LEU CYS VAL SEQRES 23 D 339 SER PHE ALA TYR ILE ASN CYS CYS ILE ASN PRO ILE ILE SEQRES 24 D 339 TYR VAL VAL ALA GLY GLN GLY PHE GLN GLY ARG LEU ARG SEQRES 25 D 339 LYS SER LEU PRO SER LEU LEU ARG ASN VAL LEU THR GLU SEQRES 26 D 339 GLU SER VAL VAL ARG HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 27 D 339 HIS SEQRES 1 S 267 MET ASP VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL SEQRES 2 S 267 GLN PRO GLY GLY SER ARG LYS LEU SER CYS SER ALA SER SEQRES 3 S 267 GLY PHE ALA PHE SER SER PHE GLY MET HIS TRP VAL ARG SEQRES 4 S 267 GLN ALA PRO GLU LYS GLY LEU GLU TRP VAL ALA TYR ILE SEQRES 5 S 267 SER SER GLY SER GLY THR ILE TYR TYR ALA ASP THR VAL SEQRES 6 S 267 LYS GLY ARG PHE THR ILE SER ARG ASP ASP PRO LYS ASN SEQRES 7 S 267 THR LEU PHE LEU GLN MET THR SER LEU ARG SER GLU ASP SEQRES 8 S 267 THR ALA MET TYR TYR CYS VAL ARG SER ILE TYR TYR TYR SEQRES 9 S 267 GLY SER SER PRO PHE ASP PHE TRP GLY GLN GLY THR THR SEQRES 10 S 267 LEU THR VAL SER SER GLY GLY GLY GLY SER GLY GLY GLY SEQRES 11 S 267 GLY SER GLY GLY GLY GLY SER ASP ILE VAL MET THR GLN SEQRES 12 S 267 ALA THR SER SER VAL PRO VAL THR PRO GLY GLU SER VAL SEQRES 13 S 267 SER ILE SER CYS ARG SER SER LYS SER LEU LEU HIS SER SEQRES 14 S 267 ASN GLY ASN THR TYR LEU TYR TRP PHE LEU GLN ARG PRO SEQRES 15 S 267 GLY GLN SER PRO GLN LEU LEU ILE TYR ARG MET SER ASN SEQRES 16 S 267 LEU ALA SER GLY VAL PRO ASP ARG PHE SER GLY SER GLY SEQRES 17 S 267 SER GLY THR ALA PHE THR LEU THR ILE SER ARG LEU GLU SEQRES 18 S 267 ALA GLU ASP VAL GLY VAL TYR TYR CYS MET GLN HIS LEU SEQRES 19 S 267 GLU TYR PRO LEU THR PHE GLY ALA GLY THR LYS LEU GLU SEQRES 20 S 267 LEU LYS ALA ALA ALA GLU ASN LEU TYR PHE GLN GLY HIS SEQRES 21 S 267 HIS HIS HIS HIS HIS HIS HIS SEQRES 1 L 6 MEA LYS PRO ZAL TRP DAR HET MEA L 1 12 HET ZAL L 4 11 HET DAR L 6 12 HETNAM MEA N-METHYLPHENYLALANINE HETNAM ZAL 3-CYCLOHEXYL-D-ALANINE HETNAM DAR D-ARGININE FORMUL 6 MEA C10 H13 N O2 FORMUL 6 ZAL C9 H17 N O2 FORMUL 6 DAR C6 H15 N4 O2 1+ HELIX 1 AA1 SER A 6 ALA A 30 1 25 HELIX 2 AA2 GLY A 45 LYS A 54 1 10 HELIX 3 AA3 GLU A 207 PHE A 215 5 9 HELIX 4 AA4 ASN A 241 ASN A 255 1 15 HELIX 5 AA5 LYS A 270 ILE A 278 1 9 HELIX 6 AA6 PRO A 282 CYS A 286 5 5 HELIX 7 AA7 THR A 295 ASP A 309 1 15 HELIX 8 AA8 LYS A 330 CYS A 351 1 22 HELIX 9 AA9 SER B 2 CYS B 25 1 24 HELIX 10 AB1 THR B 29 THR B 34 1 6 HELIX 11 AB2 ALA C 7 ALA C 23 1 17 HELIX 12 AB3 LYS C 29 ALA C 45 1 17 HELIX 13 AB4 LYS C 46 ASP C 48 5 3 HELIX 14 AB5 PRO C 55 ASN C 59 5 5 HELIX 15 AB6 ARG D 34 GLU D 65 1 32 HELIX 16 AB7 ASN D 71 ALA D 88 1 18 HELIX 17 AB8 ALA D 88 GLN D 98 1 11 HELIX 18 AB9 GLY D 105 SER D 110 1 6 HELIX 19 AC1 LEU D 117 PHE D 139 1 23 HELIX 20 AC2 LYS D 140 PHE D 147 1 8 HELIX 21 AC3 GLY D 149 TYR D 174 1 26 HELIX 22 AC4 LYS D 196 SER D 231 1 36 HELIX 23 AC5 THR D 238 LEU D 268 1 31 HELIX 24 AC6 SER D 272 PHE D 288 1 17 HELIX 25 AC7 ALA D 289 ALA D 303 1 15 HELIX 26 AC8 GLY D 306 SER D 314 1 9 HELIX 27 AC9 ALA S 28 PHE S 32 5 5 HELIX 28 AD1 ASP S 62 LYS S 65 5 4 HELIX 29 AD2 GLU S 220 VAL S 224 5 5 SHEET 1 AA1 6 VAL A 185 THR A 190 0 SHEET 2 AA1 6 HIS A 195 ASP A 200 -1 O ASP A 200 N VAL A 185 SHEET 3 AA1 6 VAL A 34 LEU A 39 1 N LEU A 38 O PHE A 199 SHEET 4 AA1 6 ALA A 220 ALA A 226 1 O ILE A 222 N LEU A 39 SHEET 5 AA1 6 SER A 263 ASN A 269 1 O ILE A 265 N PHE A 223 SHEET 6 AA1 6 ILE A 319 PHE A 323 1 O TYR A 320 N LEU A 266 SHEET 1 AA2 4 ARG B 46 LEU B 51 0 SHEET 2 AA2 4 LEU B 336 ASN B 340 -1 O ILE B 338 N ARG B 49 SHEET 3 AA2 4 VAL B 327 SER B 331 -1 N VAL B 327 O TRP B 339 SHEET 4 AA2 4 VAL B 315 VAL B 320 -1 N CYS B 317 O GLY B 330 SHEET 1 AA3 4 ILE B 58 TRP B 63 0 SHEET 2 AA3 4 LEU B 70 SER B 74 -1 O ALA B 73 N TYR B 59 SHEET 3 AA3 4 LYS B 78 ASP B 83 -1 O TRP B 82 N LEU B 70 SHEET 4 AA3 4 ASN B 88 PRO B 94 -1 O ILE B 93 N LEU B 79 SHEET 1 AA4 4 THR B 102 TYR B 105 0 SHEET 2 AA4 4 TYR B 111 GLY B 115 -1 O ALA B 113 N ALA B 104 SHEET 3 AA4 4 ILE B 120 ASN B 125 -1 O SER B 122 N CYS B 114 SHEET 4 AA4 4 ARG B 134 ALA B 140 -1 O SER B 136 N ILE B 123 SHEET 1 AA5 4 LEU B 146 PHE B 151 0 SHEET 2 AA5 4 GLN B 156 SER B 161 -1 O SER B 160 N CYS B 148 SHEET 3 AA5 4 THR B 165 ASP B 170 -1 O ALA B 167 N THR B 159 SHEET 4 AA5 4 THR B 178 THR B 181 -1 O PHE B 180 N CYS B 166 SHEET 1 AA6 4 VAL B 187 LEU B 192 0 SHEET 2 AA6 4 LEU B 198 ALA B 203 -1 O GLY B 202 N MET B 188 SHEET 3 AA6 4 SER B 207 ASP B 212 -1 O TRP B 211 N PHE B 199 SHEET 4 AA6 4 CYS B 218 THR B 223 -1 O PHE B 222 N ALA B 208 SHEET 1 AA7 4 ILE B 229 PHE B 234 0 SHEET 2 AA7 4 ALA B 240 SER B 245 -1 O GLY B 244 N ASN B 230 SHEET 3 AA7 4 CYS B 250 ASP B 254 -1 O PHE B 253 N PHE B 241 SHEET 4 AA7 4 GLU B 260 TYR B 264 -1 O TYR B 264 N CYS B 250 SHEET 1 AA8 3 ILE B 273 PHE B 278 0 SHEET 2 AA8 3 LEU B 284 TYR B 289 -1 O LEU B 286 N SER B 277 SHEET 3 AA8 3 CYS B 294 ASP B 298 -1 O TRP B 297 N LEU B 285 SHEET 1 AA9 3 ARG D 175 ARG D 178 0 SHEET 2 AA9 3 LEU D 187 VAL D 190 -1 O GLY D 189 N VAL D 176 SHEET 3 AA9 3 LYS L 2 PRO L 3 -1 O LYS L 2 N VAL D 190 SHEET 1 AB1 4 GLN S 3 SER S 7 0 SHEET 2 AB1 4 ARG S 18 SER S 25 -1 O SER S 21 N SER S 7 SHEET 3 AB1 4 THR S 78 MET S 83 -1 O MET S 83 N ARG S 18 SHEET 4 AB1 4 PHE S 68 ASP S 73 -1 N SER S 71 O PHE S 80 SHEET 1 AB2 6 LEU S 11 VAL S 12 0 SHEET 2 AB2 6 GLY S 114 VAL S 119 1 O THR S 118 N VAL S 12 SHEET 3 AB2 6 ALA S 92 SER S 99 -1 N TYR S 94 O THR S 115 SHEET 4 AB2 6 GLY S 33 GLN S 39 -1 N VAL S 37 O TYR S 95 SHEET 5 AB2 6 LEU S 45 ILE S 51 -1 O GLU S 46 N ARG S 38 SHEET 6 AB2 6 ILE S 58 TYR S 60 -1 O TYR S 59 N TYR S 50 SHEET 1 AB3 6 SER S 146 PRO S 148 0 SHEET 2 AB3 6 THR S 243 GLU S 246 1 O GLU S 246 N VAL S 147 SHEET 3 AB3 6 GLY S 225 GLN S 231 -1 N TYR S 227 O THR S 243 SHEET 4 AB3 6 LEU S 174 GLN S 179 -1 N PHE S 177 O TYR S 228 SHEET 5 AB3 6 GLN S 186 TYR S 190 -1 O ILE S 189 N TRP S 176 SHEET 6 AB3 6 ASN S 194 LEU S 195 -1 O ASN S 194 N TYR S 190 SHEET 1 AB4 3 VAL S 155 ARG S 160 0 SHEET 2 AB4 3 ALA S 211 ILE S 216 -1 O ILE S 216 N VAL S 155 SHEET 3 AB4 3 PHE S 203 SER S 208 -1 N SER S 206 O THR S 213 SSBOND 1 CYS D 109 CYS D 188 1555 1555 2.03 SSBOND 2 CYS S 159 CYS S 229 1555 1555 2.04 LINK C MEA L 1 N LYS L 2 1555 1555 1.39 LINK C PRO L 3 N ZAL L 4 1555 1555 1.33 LINK C ZAL L 4 N TRP L 5 1555 1555 1.33 LINK C TRP L 5 N DAR L 6 1555 1555 1.33 CISPEP 1 TYR S 235 PRO S 236 0 0.51 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000