data_7YP2 # _entry.id 7YP2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7YP2 pdb_00007yp2 10.2210/pdb7yp2/pdb WWPDB D_1300031336 ? ? EMDB EMD-33994 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-01-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7YP2 _pdbx_database_status.recvd_initial_deposition_date 2022-08-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of EBV gHgL-gp42 in complex with mAb 6H2 (localized refinement)' _pdbx_database_related.db_id EMD-33994 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email abing0811@xmu.edu.cn _pdbx_contact_author.name_first Qingbing _pdbx_contact_author.name_last Zheng _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-7516-9965 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Liu, L.' 1 ? 'Sun, H.' 2 ? 'Jiang, Y.' 3 ? 'Hong, J.' 4 ? 'Zheng, Q.' 5 ? 'Li, S.' 6 ? 'Chen, Y.' 7 ? 'Xia, N.' 8 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cell Rep Med' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2666-3791 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 4 _citation.language ? _citation.page_first 101296 _citation.page_last 101296 _citation.title 'Non-overlapping epitopes on the gHgL-gp42 complex for the rational design of a triple-antibody cocktail against EBV infection.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.xcrm.2023.101296 _citation.pdbx_database_id_PubMed 37992686 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hong, J.' 1 ? primary 'Zhong, L.' 2 ? primary 'Liu, L.' 3 ? primary 'Wu, Q.' 4 ? primary 'Zhang, W.' 5 ? primary 'Chen, K.' 6 ? primary 'Wei, D.' 7 ? primary 'Sun, H.' 8 ? primary 'Zhou, X.' 9 ? primary 'Zhang, X.' 10 ? primary 'Kang, Y.F.' 11 ? primary 'Huang, Y.' 12 ? primary 'Chen, J.' 13 ? primary 'Wang, G.' 14 ? primary 'Zhou, Y.' 15 ? primary 'Chen, Y.' 16 ? primary 'Feng, Q.S.' 17 ? primary 'Yu, H.' 18 ? primary 'Li, S.' 19 ? primary 'Zeng, M.S.' 20 ? primary 'Zeng, Y.X.' 21 ? primary 'Xu, M.' 22 ? primary 'Zheng, Q.' 23 ? primary 'Chen, Y.' 24 ? primary 'Zhang, X.' 25 ? primary 'Xia, N.' 26 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Envelope glycoprotein H' 34794.770 1 ? ? ? ? 2 polymer man '6H2 heavy chain' 13220.722 1 ? ? ? ? 3 polymer man '6H2 light chain' 12314.811 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name gH # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MEELGHLTTEKQEYALRLATVGYPKAGVYSGLIGGATSVLLSAYNRHPLFQPLHTVMRETLFIGSHVVLRELRLNVTTQG PNLALYQLLSTALCSALEIGEVLRGLALGTESGLFSPCYLSLRFDLTRDKLLSMAPQEATLDQAAVSNAVDGFLGRLSLE REDRDAWHLPAYKCVDRLDKVLMIIPLINVTFIISSDREVRGSALYEASTTYLSSSLFLSPVIMNKCSQGAVAGEPRQIP KIQNFTRTQKSCIFCGFALLSYDEKEGLETTTYITSQEVQNSILSSNYFDFDNLHVHYLLLTTNGTVMEIAGLY ; ;MEELGHLTTEKQEYALRLATVGYPKAGVYSGLIGGATSVLLSAYNRHPLFQPLHTVMRETLFIGSHVVLRELRLNVTTQG PNLALYQLLSTALCSALEIGEVLRGLALGTESGLFSPCYLSLRFDLTRDKLLSMAPQEATLDQAAVSNAVDGFLGRLSLE REDRDAWHLPAYKCVDRLDKVLMIIPLINVTFIISSDREVRGSALYEASTTYLSSSLFLSPVIMNKCSQGAVAGEPRQIP KIQNFTRTQKSCIFCGFALLSYDEKEGLETTTYITSQEVQNSILSSNYFDFDNLHVHYLLLTTNGTVMEIAGLY ; A ? 2 'polypeptide(L)' no no ;EVKLLESGGGLVQPGGSLKLSCAASGFDFSRYWMTWVRQAPGQGLEWIGEINPDSSTINYTPSLKDKFIISRDNAKNTLY LQVSKLRSEDTALYYCARSPYYYGSSYDVWGAGTAVTVSS ; ;EVKLLESGGGLVQPGGSLKLSCAASGFDFSRYWMTWVRQAPGQGLEWIGEINPDSSTINYTPSLKDKFIISRDNAKNTLY LQVSKLRSEDTALYYCARSPYYYGSSYDVWGAGTAVTVSS ; H ? 3 'polypeptide(L)' no no ;DIVMSQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLT ISSVQAEDLAFYYCKQSYNLPTFGGGTKLEIK ; ;DIVMSQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLT ISSVQAEDLAFYYCKQSYNLPTFGGGTKLEIK ; L ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 GLU n 1 4 LEU n 1 5 GLY n 1 6 HIS n 1 7 LEU n 1 8 THR n 1 9 THR n 1 10 GLU n 1 11 LYS n 1 12 GLN n 1 13 GLU n 1 14 TYR n 1 15 ALA n 1 16 LEU n 1 17 ARG n 1 18 LEU n 1 19 ALA n 1 20 THR n 1 21 VAL n 1 22 GLY n 1 23 TYR n 1 24 PRO n 1 25 LYS n 1 26 ALA n 1 27 GLY n 1 28 VAL n 1 29 TYR n 1 30 SER n 1 31 GLY n 1 32 LEU n 1 33 ILE n 1 34 GLY n 1 35 GLY n 1 36 ALA n 1 37 THR n 1 38 SER n 1 39 VAL n 1 40 LEU n 1 41 LEU n 1 42 SER n 1 43 ALA n 1 44 TYR n 1 45 ASN n 1 46 ARG n 1 47 HIS n 1 48 PRO n 1 49 LEU n 1 50 PHE n 1 51 GLN n 1 52 PRO n 1 53 LEU n 1 54 HIS n 1 55 THR n 1 56 VAL n 1 57 MET n 1 58 ARG n 1 59 GLU n 1 60 THR n 1 61 LEU n 1 62 PHE n 1 63 ILE n 1 64 GLY n 1 65 SER n 1 66 HIS n 1 67 VAL n 1 68 VAL n 1 69 LEU n 1 70 ARG n 1 71 GLU n 1 72 LEU n 1 73 ARG n 1 74 LEU n 1 75 ASN n 1 76 VAL n 1 77 THR n 1 78 THR n 1 79 GLN n 1 80 GLY n 1 81 PRO n 1 82 ASN n 1 83 LEU n 1 84 ALA n 1 85 LEU n 1 86 TYR n 1 87 GLN n 1 88 LEU n 1 89 LEU n 1 90 SER n 1 91 THR n 1 92 ALA n 1 93 LEU n 1 94 CYS n 1 95 SER n 1 96 ALA n 1 97 LEU n 1 98 GLU n 1 99 ILE n 1 100 GLY n 1 101 GLU n 1 102 VAL n 1 103 LEU n 1 104 ARG n 1 105 GLY n 1 106 LEU n 1 107 ALA n 1 108 LEU n 1 109 GLY n 1 110 THR n 1 111 GLU n 1 112 SER n 1 113 GLY n 1 114 LEU n 1 115 PHE n 1 116 SER n 1 117 PRO n 1 118 CYS n 1 119 TYR n 1 120 LEU n 1 121 SER n 1 122 LEU n 1 123 ARG n 1 124 PHE n 1 125 ASP n 1 126 LEU n 1 127 THR n 1 128 ARG n 1 129 ASP n 1 130 LYS n 1 131 LEU n 1 132 LEU n 1 133 SER n 1 134 MET n 1 135 ALA n 1 136 PRO n 1 137 GLN n 1 138 GLU n 1 139 ALA n 1 140 THR n 1 141 LEU n 1 142 ASP n 1 143 GLN n 1 144 ALA n 1 145 ALA n 1 146 VAL n 1 147 SER n 1 148 ASN n 1 149 ALA n 1 150 VAL n 1 151 ASP n 1 152 GLY n 1 153 PHE n 1 154 LEU n 1 155 GLY n 1 156 ARG n 1 157 LEU n 1 158 SER n 1 159 LEU n 1 160 GLU n 1 161 ARG n 1 162 GLU n 1 163 ASP n 1 164 ARG n 1 165 ASP n 1 166 ALA n 1 167 TRP n 1 168 HIS n 1 169 LEU n 1 170 PRO n 1 171 ALA n 1 172 TYR n 1 173 LYS n 1 174 CYS n 1 175 VAL n 1 176 ASP n 1 177 ARG n 1 178 LEU n 1 179 ASP n 1 180 LYS n 1 181 VAL n 1 182 LEU n 1 183 MET n 1 184 ILE n 1 185 ILE n 1 186 PRO n 1 187 LEU n 1 188 ILE n 1 189 ASN n 1 190 VAL n 1 191 THR n 1 192 PHE n 1 193 ILE n 1 194 ILE n 1 195 SER n 1 196 SER n 1 197 ASP n 1 198 ARG n 1 199 GLU n 1 200 VAL n 1 201 ARG n 1 202 GLY n 1 203 SER n 1 204 ALA n 1 205 LEU n 1 206 TYR n 1 207 GLU n 1 208 ALA n 1 209 SER n 1 210 THR n 1 211 THR n 1 212 TYR n 1 213 LEU n 1 214 SER n 1 215 SER n 1 216 SER n 1 217 LEU n 1 218 PHE n 1 219 LEU n 1 220 SER n 1 221 PRO n 1 222 VAL n 1 223 ILE n 1 224 MET n 1 225 ASN n 1 226 LYS n 1 227 CYS n 1 228 SER n 1 229 GLN n 1 230 GLY n 1 231 ALA n 1 232 VAL n 1 233 ALA n 1 234 GLY n 1 235 GLU n 1 236 PRO n 1 237 ARG n 1 238 GLN n 1 239 ILE n 1 240 PRO n 1 241 LYS n 1 242 ILE n 1 243 GLN n 1 244 ASN n 1 245 PHE n 1 246 THR n 1 247 ARG n 1 248 THR n 1 249 GLN n 1 250 LYS n 1 251 SER n 1 252 CYS n 1 253 ILE n 1 254 PHE n 1 255 CYS n 1 256 GLY n 1 257 PHE n 1 258 ALA n 1 259 LEU n 1 260 LEU n 1 261 SER n 1 262 TYR n 1 263 ASP n 1 264 GLU n 1 265 LYS n 1 266 GLU n 1 267 GLY n 1 268 LEU n 1 269 GLU n 1 270 THR n 1 271 THR n 1 272 THR n 1 273 TYR n 1 274 ILE n 1 275 THR n 1 276 SER n 1 277 GLN n 1 278 GLU n 1 279 VAL n 1 280 GLN n 1 281 ASN n 1 282 SER n 1 283 ILE n 1 284 LEU n 1 285 SER n 1 286 SER n 1 287 ASN n 1 288 TYR n 1 289 PHE n 1 290 ASP n 1 291 PHE n 1 292 ASP n 1 293 ASN n 1 294 LEU n 1 295 HIS n 1 296 VAL n 1 297 HIS n 1 298 TYR n 1 299 LEU n 1 300 LEU n 1 301 LEU n 1 302 THR n 1 303 THR n 1 304 ASN n 1 305 GLY n 1 306 THR n 1 307 VAL n 1 308 MET n 1 309 GLU n 1 310 ILE n 1 311 ALA n 1 312 GLY n 1 313 LEU n 1 314 TYR n 2 1 GLU n 2 2 VAL n 2 3 LYS n 2 4 LEU n 2 5 LEU n 2 6 GLU n 2 7 SER n 2 8 GLY n 2 9 GLY n 2 10 GLY n 2 11 LEU n 2 12 VAL n 2 13 GLN n 2 14 PRO n 2 15 GLY n 2 16 GLY n 2 17 SER n 2 18 LEU n 2 19 LYS n 2 20 LEU n 2 21 SER n 2 22 CYS n 2 23 ALA n 2 24 ALA n 2 25 SER n 2 26 GLY n 2 27 PHE n 2 28 ASP n 2 29 PHE n 2 30 SER n 2 31 ARG n 2 32 TYR n 2 33 TRP n 2 34 MET n 2 35 THR n 2 36 TRP n 2 37 VAL n 2 38 ARG n 2 39 GLN n 2 40 ALA n 2 41 PRO n 2 42 GLY n 2 43 GLN n 2 44 GLY n 2 45 LEU n 2 46 GLU n 2 47 TRP n 2 48 ILE n 2 49 GLY n 2 50 GLU n 2 51 ILE n 2 52 ASN n 2 53 PRO n 2 54 ASP n 2 55 SER n 2 56 SER n 2 57 THR n 2 58 ILE n 2 59 ASN n 2 60 TYR n 2 61 THR n 2 62 PRO n 2 63 SER n 2 64 LEU n 2 65 LYS n 2 66 ASP n 2 67 LYS n 2 68 PHE n 2 69 ILE n 2 70 ILE n 2 71 SER n 2 72 ARG n 2 73 ASP n 2 74 ASN n 2 75 ALA n 2 76 LYS n 2 77 ASN n 2 78 THR n 2 79 LEU n 2 80 TYR n 2 81 LEU n 2 82 GLN n 2 83 VAL n 2 84 SER n 2 85 LYS n 2 86 LEU n 2 87 ARG n 2 88 SER n 2 89 GLU n 2 90 ASP n 2 91 THR n 2 92 ALA n 2 93 LEU n 2 94 TYR n 2 95 TYR n 2 96 CYS n 2 97 ALA n 2 98 ARG n 2 99 SER n 2 100 PRO n 2 101 TYR n 2 102 TYR n 2 103 TYR n 2 104 GLY n 2 105 SER n 2 106 SER n 2 107 TYR n 2 108 ASP n 2 109 VAL n 2 110 TRP n 2 111 GLY n 2 112 ALA n 2 113 GLY n 2 114 THR n 2 115 ALA n 2 116 VAL n 2 117 THR n 2 118 VAL n 2 119 SER n 2 120 SER n 3 1 ASP n 3 2 ILE n 3 3 VAL n 3 4 MET n 3 5 SER n 3 6 GLN n 3 7 SER n 3 8 PRO n 3 9 SER n 3 10 SER n 3 11 LEU n 3 12 ALA n 3 13 VAL n 3 14 SER n 3 15 ALA n 3 16 GLY n 3 17 GLU n 3 18 LYS n 3 19 VAL n 3 20 THR n 3 21 MET n 3 22 ASN n 3 23 CYS n 3 24 LYS n 3 25 SER n 3 26 SER n 3 27 GLN n 3 28 SER n 3 29 LEU n 3 30 LEU n 3 31 ASN n 3 32 SER n 3 33 ARG n 3 34 THR n 3 35 ARG n 3 36 LYS n 3 37 ASN n 3 38 TYR n 3 39 LEU n 3 40 ALA n 3 41 TRP n 3 42 TYR n 3 43 GLN n 3 44 GLN n 3 45 LYS n 3 46 PRO n 3 47 GLY n 3 48 GLN n 3 49 SER n 3 50 PRO n 3 51 LYS n 3 52 LEU n 3 53 LEU n 3 54 ILE n 3 55 TYR n 3 56 TRP n 3 57 ALA n 3 58 SER n 3 59 THR n 3 60 ARG n 3 61 GLU n 3 62 SER n 3 63 GLY n 3 64 VAL n 3 65 PRO n 3 66 ASP n 3 67 ARG n 3 68 PHE n 3 69 THR n 3 70 GLY n 3 71 SER n 3 72 GLY n 3 73 SER n 3 74 GLY n 3 75 THR n 3 76 ASP n 3 77 PHE n 3 78 THR n 3 79 LEU n 3 80 THR n 3 81 ILE n 3 82 SER n 3 83 SER n 3 84 VAL n 3 85 GLN n 3 86 ALA n 3 87 GLU n 3 88 ASP n 3 89 LEU n 3 90 ALA n 3 91 PHE n 3 92 TYR n 3 93 TYR n 3 94 CYS n 3 95 LYS n 3 96 GLN n 3 97 SER n 3 98 TYR n 3 99 ASN n 3 100 LEU n 3 101 PRO n 3 102 THR n 3 103 PHE n 3 104 GLY n 3 105 GLY n 3 106 GLY n 3 107 THR n 3 108 LYS n 3 109 LEU n 3 110 GLU n 3 111 ILE n 3 112 LYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 314 'Epstein-Barr virus' ? gH ? GD1 ? ? ? ? 'Human gammaherpesvirus 4' 10376 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293 ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 120 ? ? ? ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293 ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 112 ? ? ? ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293 ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 361 361 MET MET A . n A 1 2 GLU 2 362 362 GLU GLU A . n A 1 3 GLU 3 363 363 GLU GLU A . n A 1 4 LEU 4 364 364 LEU LEU A . n A 1 5 GLY 5 365 365 GLY GLY A . n A 1 6 HIS 6 366 366 HIS HIS A . n A 1 7 LEU 7 367 367 LEU LEU A . n A 1 8 THR 8 368 368 THR THR A . n A 1 9 THR 9 369 369 THR THR A . n A 1 10 GLU 10 370 370 GLU GLU A . n A 1 11 LYS 11 371 371 LYS LYS A . n A 1 12 GLN 12 372 372 GLN GLN A . n A 1 13 GLU 13 373 373 GLU GLU A . n A 1 14 TYR 14 374 374 TYR TYR A . n A 1 15 ALA 15 375 375 ALA ALA A . n A 1 16 LEU 16 376 376 LEU LEU A . n A 1 17 ARG 17 377 377 ARG ARG A . n A 1 18 LEU 18 378 378 LEU LEU A . n A 1 19 ALA 19 379 379 ALA ALA A . n A 1 20 THR 20 380 380 THR THR A . n A 1 21 VAL 21 381 381 VAL VAL A . n A 1 22 GLY 22 382 382 GLY GLY A . n A 1 23 TYR 23 383 383 TYR TYR A . n A 1 24 PRO 24 384 384 PRO PRO A . n A 1 25 LYS 25 385 385 LYS LYS A . n A 1 26 ALA 26 386 386 ALA ALA A . n A 1 27 GLY 27 387 387 GLY GLY A . n A 1 28 VAL 28 388 388 VAL VAL A . n A 1 29 TYR 29 389 389 TYR TYR A . n A 1 30 SER 30 390 390 SER SER A . n A 1 31 GLY 31 391 391 GLY GLY A . n A 1 32 LEU 32 392 392 LEU LEU A . n A 1 33 ILE 33 393 393 ILE ILE A . n A 1 34 GLY 34 394 394 GLY GLY A . n A 1 35 GLY 35 395 395 GLY GLY A . n A 1 36 ALA 36 396 396 ALA ALA A . n A 1 37 THR 37 397 397 THR THR A . n A 1 38 SER 38 398 398 SER SER A . n A 1 39 VAL 39 399 399 VAL VAL A . n A 1 40 LEU 40 400 400 LEU LEU A . n A 1 41 LEU 41 401 401 LEU LEU A . n A 1 42 SER 42 402 402 SER SER A . n A 1 43 ALA 43 403 403 ALA ALA A . n A 1 44 TYR 44 404 404 TYR TYR A . n A 1 45 ASN 45 405 405 ASN ASN A . n A 1 46 ARG 46 406 406 ARG ARG A . n A 1 47 HIS 47 407 407 HIS HIS A . n A 1 48 PRO 48 408 408 PRO PRO A . n A 1 49 LEU 49 409 409 LEU LEU A . n A 1 50 PHE 50 410 410 PHE PHE A . n A 1 51 GLN 51 411 411 GLN GLN A . n A 1 52 PRO 52 412 412 PRO PRO A . n A 1 53 LEU 53 413 413 LEU LEU A . n A 1 54 HIS 54 414 414 HIS HIS A . n A 1 55 THR 55 415 415 THR THR A . n A 1 56 VAL 56 416 416 VAL VAL A . n A 1 57 MET 57 417 417 MET MET A . n A 1 58 ARG 58 418 418 ARG ARG A . n A 1 59 GLU 59 419 419 GLU GLU A . n A 1 60 THR 60 420 420 THR THR A . n A 1 61 LEU 61 421 421 LEU LEU A . n A 1 62 PHE 62 422 422 PHE PHE A . n A 1 63 ILE 63 423 423 ILE ILE A . n A 1 64 GLY 64 424 424 GLY GLY A . n A 1 65 SER 65 425 425 SER SER A . n A 1 66 HIS 66 426 426 HIS HIS A . n A 1 67 VAL 67 427 427 VAL VAL A . n A 1 68 VAL 68 428 428 VAL VAL A . n A 1 69 LEU 69 429 429 LEU LEU A . n A 1 70 ARG 70 430 430 ARG ARG A . n A 1 71 GLU 71 431 431 GLU GLU A . n A 1 72 LEU 72 432 432 LEU LEU A . n A 1 73 ARG 73 433 433 ARG ARG A . n A 1 74 LEU 74 434 434 LEU LEU A . n A 1 75 ASN 75 435 435 ASN ASN A . n A 1 76 VAL 76 436 436 VAL VAL A . n A 1 77 THR 77 437 437 THR THR A . n A 1 78 THR 78 438 438 THR THR A . n A 1 79 GLN 79 439 439 GLN GLN A . n A 1 80 GLY 80 440 440 GLY GLY A . n A 1 81 PRO 81 441 441 PRO PRO A . n A 1 82 ASN 82 442 442 ASN ASN A . n A 1 83 LEU 83 443 443 LEU LEU A . n A 1 84 ALA 84 444 444 ALA ALA A . n A 1 85 LEU 85 445 445 LEU LEU A . n A 1 86 TYR 86 446 446 TYR TYR A . n A 1 87 GLN 87 447 447 GLN GLN A . n A 1 88 LEU 88 448 448 LEU LEU A . n A 1 89 LEU 89 449 449 LEU LEU A . n A 1 90 SER 90 450 450 SER SER A . n A 1 91 THR 91 451 451 THR THR A . n A 1 92 ALA 92 452 452 ALA ALA A . n A 1 93 LEU 93 453 453 LEU LEU A . n A 1 94 CYS 94 454 454 CYS CYS A . n A 1 95 SER 95 455 455 SER SER A . n A 1 96 ALA 96 456 456 ALA ALA A . n A 1 97 LEU 97 457 457 LEU LEU A . n A 1 98 GLU 98 458 458 GLU GLU A . n A 1 99 ILE 99 459 459 ILE ILE A . n A 1 100 GLY 100 460 460 GLY GLY A . n A 1 101 GLU 101 461 461 GLU GLU A . n A 1 102 VAL 102 462 462 VAL VAL A . n A 1 103 LEU 103 463 463 LEU LEU A . n A 1 104 ARG 104 464 464 ARG ARG A . n A 1 105 GLY 105 465 465 GLY GLY A . n A 1 106 LEU 106 466 466 LEU LEU A . n A 1 107 ALA 107 467 467 ALA ALA A . n A 1 108 LEU 108 468 468 LEU LEU A . n A 1 109 GLY 109 469 469 GLY GLY A . n A 1 110 THR 110 470 470 THR THR A . n A 1 111 GLU 111 471 471 GLU GLU A . n A 1 112 SER 112 472 472 SER SER A . n A 1 113 GLY 113 473 473 GLY GLY A . n A 1 114 LEU 114 474 474 LEU LEU A . n A 1 115 PHE 115 475 475 PHE PHE A . n A 1 116 SER 116 476 476 SER SER A . n A 1 117 PRO 117 477 477 PRO PRO A . n A 1 118 CYS 118 478 478 CYS CYS A . n A 1 119 TYR 119 479 479 TYR TYR A . n A 1 120 LEU 120 480 480 LEU LEU A . n A 1 121 SER 121 481 481 SER SER A . n A 1 122 LEU 122 482 482 LEU LEU A . n A 1 123 ARG 123 483 483 ARG ARG A . n A 1 124 PHE 124 484 484 PHE PHE A . n A 1 125 ASP 125 485 485 ASP ASP A . n A 1 126 LEU 126 486 486 LEU LEU A . n A 1 127 THR 127 487 487 THR THR A . n A 1 128 ARG 128 488 488 ARG ARG A . n A 1 129 ASP 129 489 489 ASP ASP A . n A 1 130 LYS 130 490 490 LYS LYS A . n A 1 131 LEU 131 491 491 LEU LEU A . n A 1 132 LEU 132 492 492 LEU LEU A . n A 1 133 SER 133 493 493 SER SER A . n A 1 134 MET 134 494 494 MET MET A . n A 1 135 ALA 135 495 495 ALA ALA A . n A 1 136 PRO 136 496 496 PRO PRO A . n A 1 137 GLN 137 497 497 GLN GLN A . n A 1 138 GLU 138 498 498 GLU GLU A . n A 1 139 ALA 139 499 499 ALA ALA A . n A 1 140 THR 140 500 500 THR THR A . n A 1 141 LEU 141 501 501 LEU LEU A . n A 1 142 ASP 142 502 502 ASP ASP A . n A 1 143 GLN 143 503 503 GLN GLN A . n A 1 144 ALA 144 504 504 ALA ALA A . n A 1 145 ALA 145 505 505 ALA ALA A . n A 1 146 VAL 146 506 506 VAL VAL A . n A 1 147 SER 147 507 507 SER SER A . n A 1 148 ASN 148 508 508 ASN ASN A . n A 1 149 ALA 149 509 509 ALA ALA A . n A 1 150 VAL 150 510 510 VAL VAL A . n A 1 151 ASP 151 511 511 ASP ASP A . n A 1 152 GLY 152 512 512 GLY GLY A . n A 1 153 PHE 153 513 513 PHE PHE A . n A 1 154 LEU 154 514 514 LEU LEU A . n A 1 155 GLY 155 515 515 GLY GLY A . n A 1 156 ARG 156 516 516 ARG ARG A . n A 1 157 LEU 157 517 517 LEU LEU A . n A 1 158 SER 158 518 518 SER SER A . n A 1 159 LEU 159 519 519 LEU LEU A . n A 1 160 GLU 160 520 520 GLU GLU A . n A 1 161 ARG 161 521 521 ARG ARG A . n A 1 162 GLU 162 522 522 GLU GLU A . n A 1 163 ASP 163 523 523 ASP ASP A . n A 1 164 ARG 164 524 524 ARG ARG A . n A 1 165 ASP 165 525 525 ASP ASP A . n A 1 166 ALA 166 526 526 ALA ALA A . n A 1 167 TRP 167 527 527 TRP TRP A . n A 1 168 HIS 168 528 528 HIS HIS A . n A 1 169 LEU 169 529 529 LEU LEU A . n A 1 170 PRO 170 530 530 PRO PRO A . n A 1 171 ALA 171 531 531 ALA ALA A . n A 1 172 TYR 172 532 532 TYR TYR A . n A 1 173 LYS 173 533 533 LYS LYS A . n A 1 174 CYS 174 534 534 CYS CYS A . n A 1 175 VAL 175 535 535 VAL VAL A . n A 1 176 ASP 176 536 536 ASP ASP A . n A 1 177 ARG 177 537 537 ARG ARG A . n A 1 178 LEU 178 538 538 LEU LEU A . n A 1 179 ASP 179 539 539 ASP ASP A . n A 1 180 LYS 180 540 540 LYS LYS A . n A 1 181 VAL 181 541 541 VAL VAL A . n A 1 182 LEU 182 542 542 LEU LEU A . n A 1 183 MET 183 543 543 MET MET A . n A 1 184 ILE 184 544 544 ILE ILE A . n A 1 185 ILE 185 545 545 ILE ILE A . n A 1 186 PRO 186 546 546 PRO PRO A . n A 1 187 LEU 187 547 547 LEU LEU A . n A 1 188 ILE 188 548 548 ILE ILE A . n A 1 189 ASN 189 549 549 ASN ASN A . n A 1 190 VAL 190 550 550 VAL VAL A . n A 1 191 THR 191 551 551 THR THR A . n A 1 192 PHE 192 552 552 PHE PHE A . n A 1 193 ILE 193 553 553 ILE ILE A . n A 1 194 ILE 194 554 554 ILE ILE A . n A 1 195 SER 195 555 555 SER SER A . n A 1 196 SER 196 556 556 SER SER A . n A 1 197 ASP 197 557 557 ASP ASP A . n A 1 198 ARG 198 558 558 ARG ARG A . n A 1 199 GLU 199 559 559 GLU GLU A . n A 1 200 VAL 200 560 560 VAL VAL A . n A 1 201 ARG 201 561 561 ARG ARG A . n A 1 202 GLY 202 562 562 GLY GLY A . n A 1 203 SER 203 563 563 SER SER A . n A 1 204 ALA 204 564 564 ALA ALA A . n A 1 205 LEU 205 565 565 LEU LEU A . n A 1 206 TYR 206 566 566 TYR TYR A . n A 1 207 GLU 207 567 567 GLU GLU A . n A 1 208 ALA 208 568 568 ALA ALA A . n A 1 209 SER 209 569 569 SER SER A . n A 1 210 THR 210 570 570 THR THR A . n A 1 211 THR 211 571 571 THR THR A . n A 1 212 TYR 212 572 572 TYR TYR A . n A 1 213 LEU 213 573 573 LEU LEU A . n A 1 214 SER 214 574 574 SER SER A . n A 1 215 SER 215 575 575 SER SER A . n A 1 216 SER 216 576 576 SER SER A . n A 1 217 LEU 217 577 577 LEU LEU A . n A 1 218 PHE 218 578 578 PHE PHE A . n A 1 219 LEU 219 579 579 LEU LEU A . n A 1 220 SER 220 580 580 SER SER A . n A 1 221 PRO 221 581 581 PRO PRO A . n A 1 222 VAL 222 582 582 VAL VAL A . n A 1 223 ILE 223 583 583 ILE ILE A . n A 1 224 MET 224 584 584 MET MET A . n A 1 225 ASN 225 585 585 ASN ASN A . n A 1 226 LYS 226 586 586 LYS LYS A . n A 1 227 CYS 227 587 587 CYS CYS A . n A 1 228 SER 228 588 588 SER SER A . n A 1 229 GLN 229 589 589 GLN GLN A . n A 1 230 GLY 230 590 590 GLY GLY A . n A 1 231 ALA 231 591 591 ALA ALA A . n A 1 232 VAL 232 592 592 VAL VAL A . n A 1 233 ALA 233 593 593 ALA ALA A . n A 1 234 GLY 234 594 594 GLY GLY A . n A 1 235 GLU 235 595 595 GLU GLU A . n A 1 236 PRO 236 596 596 PRO PRO A . n A 1 237 ARG 237 597 597 ARG ARG A . n A 1 238 GLN 238 598 598 GLN GLN A . n A 1 239 ILE 239 599 599 ILE ILE A . n A 1 240 PRO 240 600 600 PRO PRO A . n A 1 241 LYS 241 601 601 LYS LYS A . n A 1 242 ILE 242 602 602 ILE ILE A . n A 1 243 GLN 243 603 603 GLN GLN A . n A 1 244 ASN 244 604 604 ASN ASN A . n A 1 245 PHE 245 605 605 PHE PHE A . n A 1 246 THR 246 606 606 THR THR A . n A 1 247 ARG 247 607 607 ARG ARG A . n A 1 248 THR 248 608 608 THR THR A . n A 1 249 GLN 249 609 609 GLN GLN A . n A 1 250 LYS 250 610 610 LYS LYS A . n A 1 251 SER 251 611 611 SER SER A . n A 1 252 CYS 252 612 612 CYS CYS A . n A 1 253 ILE 253 613 613 ILE ILE A . n A 1 254 PHE 254 614 614 PHE PHE A . n A 1 255 CYS 255 615 615 CYS CYS A . n A 1 256 GLY 256 616 616 GLY GLY A . n A 1 257 PHE 257 617 617 PHE PHE A . n A 1 258 ALA 258 618 618 ALA ALA A . n A 1 259 LEU 259 619 619 LEU LEU A . n A 1 260 LEU 260 620 620 LEU LEU A . n A 1 261 SER 261 621 621 SER SER A . n A 1 262 TYR 262 622 622 TYR TYR A . n A 1 263 ASP 263 623 623 ASP ASP A . n A 1 264 GLU 264 624 624 GLU GLU A . n A 1 265 LYS 265 625 625 LYS LYS A . n A 1 266 GLU 266 626 626 GLU GLU A . n A 1 267 GLY 267 627 627 GLY GLY A . n A 1 268 LEU 268 628 628 LEU LEU A . n A 1 269 GLU 269 629 629 GLU GLU A . n A 1 270 THR 270 630 630 THR THR A . n A 1 271 THR 271 631 631 THR THR A . n A 1 272 THR 272 632 632 THR THR A . n A 1 273 TYR 273 633 633 TYR TYR A . n A 1 274 ILE 274 634 634 ILE ILE A . n A 1 275 THR 275 635 635 THR THR A . n A 1 276 SER 276 636 636 SER SER A . n A 1 277 GLN 277 637 637 GLN GLN A . n A 1 278 GLU 278 638 638 GLU GLU A . n A 1 279 VAL 279 639 639 VAL VAL A . n A 1 280 GLN 280 640 640 GLN GLN A . n A 1 281 ASN 281 641 641 ASN ASN A . n A 1 282 SER 282 642 642 SER SER A . n A 1 283 ILE 283 643 643 ILE ILE A . n A 1 284 LEU 284 644 644 LEU LEU A . n A 1 285 SER 285 645 645 SER SER A . n A 1 286 SER 286 646 646 SER SER A . n A 1 287 ASN 287 647 647 ASN ASN A . n A 1 288 TYR 288 648 648 TYR TYR A . n A 1 289 PHE 289 649 649 PHE PHE A . n A 1 290 ASP 290 650 650 ASP ASP A . n A 1 291 PHE 291 651 651 PHE PHE A . n A 1 292 ASP 292 652 652 ASP ASP A . n A 1 293 ASN 293 653 653 ASN ASN A . n A 1 294 LEU 294 654 654 LEU LEU A . n A 1 295 HIS 295 655 655 HIS HIS A . n A 1 296 VAL 296 656 656 VAL VAL A . n A 1 297 HIS 297 657 657 HIS HIS A . n A 1 298 TYR 298 658 658 TYR TYR A . n A 1 299 LEU 299 659 659 LEU LEU A . n A 1 300 LEU 300 660 660 LEU LEU A . n A 1 301 LEU 301 661 661 LEU LEU A . n A 1 302 THR 302 662 662 THR THR A . n A 1 303 THR 303 663 663 THR THR A . n A 1 304 ASN 304 664 664 ASN ASN A . n A 1 305 GLY 305 665 665 GLY GLY A . n A 1 306 THR 306 666 666 THR THR A . n A 1 307 VAL 307 667 667 VAL VAL A . n A 1 308 MET 308 668 668 MET MET A . n A 1 309 GLU 309 669 669 GLU GLU A . n A 1 310 ILE 310 670 670 ILE ILE A . n A 1 311 ALA 311 671 671 ALA ALA A . n A 1 312 GLY 312 672 672 GLY GLY A . n A 1 313 LEU 313 673 673 LEU LEU A . n A 1 314 TYR 314 674 674 TYR TYR A . n B 2 1 GLU 1 1 1 GLU GLU H . n B 2 2 VAL 2 2 2 VAL VAL H . n B 2 3 LYS 3 3 3 LYS LYS H . n B 2 4 LEU 4 4 4 LEU LEU H . n B 2 5 LEU 5 5 5 LEU LEU H . n B 2 6 GLU 6 6 6 GLU GLU H . n B 2 7 SER 7 7 7 SER SER H . n B 2 8 GLY 8 8 8 GLY GLY H . n B 2 9 GLY 9 9 9 GLY GLY H . n B 2 10 GLY 10 10 10 GLY GLY H . n B 2 11 LEU 11 11 11 LEU LEU H . n B 2 12 VAL 12 12 12 VAL VAL H . n B 2 13 GLN 13 13 13 GLN GLN H . n B 2 14 PRO 14 14 14 PRO PRO H . n B 2 15 GLY 15 15 15 GLY GLY H . n B 2 16 GLY 16 16 16 GLY GLY H . n B 2 17 SER 17 17 17 SER SER H . n B 2 18 LEU 18 18 18 LEU LEU H . n B 2 19 LYS 19 19 19 LYS LYS H . n B 2 20 LEU 20 20 20 LEU LEU H . n B 2 21 SER 21 21 21 SER SER H . n B 2 22 CYS 22 22 22 CYS CYS H . n B 2 23 ALA 23 23 23 ALA ALA H . n B 2 24 ALA 24 24 24 ALA ALA H . n B 2 25 SER 25 25 25 SER SER H . n B 2 26 GLY 26 26 26 GLY GLY H . n B 2 27 PHE 27 27 27 PHE PHE H . n B 2 28 ASP 28 28 28 ASP ASP H . n B 2 29 PHE 29 29 29 PHE PHE H . n B 2 30 SER 30 30 30 SER SER H . n B 2 31 ARG 31 31 31 ARG ARG H . n B 2 32 TYR 32 32 32 TYR TYR H . n B 2 33 TRP 33 33 33 TRP TRP H . n B 2 34 MET 34 34 34 MET MET H . n B 2 35 THR 35 35 35 THR THR H . n B 2 36 TRP 36 36 36 TRP TRP H . n B 2 37 VAL 37 37 37 VAL VAL H . n B 2 38 ARG 38 38 38 ARG ARG H . n B 2 39 GLN 39 39 39 GLN GLN H . n B 2 40 ALA 40 40 40 ALA ALA H . n B 2 41 PRO 41 41 41 PRO PRO H . n B 2 42 GLY 42 42 42 GLY GLY H . n B 2 43 GLN 43 43 43 GLN GLN H . n B 2 44 GLY 44 44 44 GLY GLY H . n B 2 45 LEU 45 45 45 LEU LEU H . n B 2 46 GLU 46 46 46 GLU GLU H . n B 2 47 TRP 47 47 47 TRP TRP H . n B 2 48 ILE 48 48 48 ILE ILE H . n B 2 49 GLY 49 49 49 GLY GLY H . n B 2 50 GLU 50 50 50 GLU GLU H . n B 2 51 ILE 51 51 51 ILE ILE H . n B 2 52 ASN 52 52 52 ASN ASN H . n B 2 53 PRO 53 53 53 PRO PRO H . n B 2 54 ASP 54 54 54 ASP ASP H . n B 2 55 SER 55 55 55 SER SER H . n B 2 56 SER 56 56 56 SER SER H . n B 2 57 THR 57 57 57 THR THR H . n B 2 58 ILE 58 58 58 ILE ILE H . n B 2 59 ASN 59 59 59 ASN ASN H . n B 2 60 TYR 60 60 60 TYR TYR H . n B 2 61 THR 61 61 61 THR THR H . n B 2 62 PRO 62 62 62 PRO PRO H . n B 2 63 SER 63 63 63 SER SER H . n B 2 64 LEU 64 64 64 LEU LEU H . n B 2 65 LYS 65 65 65 LYS LYS H . n B 2 66 ASP 66 66 66 ASP ASP H . n B 2 67 LYS 67 67 67 LYS LYS H . n B 2 68 PHE 68 68 68 PHE PHE H . n B 2 69 ILE 69 69 69 ILE ILE H . n B 2 70 ILE 70 70 70 ILE ILE H . n B 2 71 SER 71 71 71 SER SER H . n B 2 72 ARG 72 72 72 ARG ARG H . n B 2 73 ASP 73 73 73 ASP ASP H . n B 2 74 ASN 74 74 74 ASN ASN H . n B 2 75 ALA 75 75 75 ALA ALA H . n B 2 76 LYS 76 76 76 LYS LYS H . n B 2 77 ASN 77 77 77 ASN ASN H . n B 2 78 THR 78 78 78 THR THR H . n B 2 79 LEU 79 79 79 LEU LEU H . n B 2 80 TYR 80 80 80 TYR TYR H . n B 2 81 LEU 81 81 81 LEU LEU H . n B 2 82 GLN 82 82 82 GLN GLN H . n B 2 83 VAL 83 83 83 VAL VAL H . n B 2 84 SER 84 84 84 SER SER H . n B 2 85 LYS 85 85 85 LYS LYS H . n B 2 86 LEU 86 86 86 LEU LEU H . n B 2 87 ARG 87 87 87 ARG ARG H . n B 2 88 SER 88 88 88 SER SER H . n B 2 89 GLU 89 89 89 GLU GLU H . n B 2 90 ASP 90 90 90 ASP ASP H . n B 2 91 THR 91 91 91 THR THR H . n B 2 92 ALA 92 92 92 ALA ALA H . n B 2 93 LEU 93 93 93 LEU LEU H . n B 2 94 TYR 94 94 94 TYR TYR H . n B 2 95 TYR 95 95 95 TYR TYR H . n B 2 96 CYS 96 96 96 CYS CYS H . n B 2 97 ALA 97 97 97 ALA ALA H . n B 2 98 ARG 98 98 98 ARG ARG H . n B 2 99 SER 99 99 99 SER SER H . n B 2 100 PRO 100 100 100 PRO PRO H . n B 2 101 TYR 101 101 101 TYR TYR H . n B 2 102 TYR 102 102 102 TYR TYR H . n B 2 103 TYR 103 103 103 TYR TYR H . n B 2 104 GLY 104 104 104 GLY GLY H . n B 2 105 SER 105 105 105 SER SER H . n B 2 106 SER 106 106 106 SER SER H . n B 2 107 TYR 107 107 107 TYR TYR H . n B 2 108 ASP 108 108 108 ASP ASP H . n B 2 109 VAL 109 109 109 VAL VAL H . n B 2 110 TRP 110 110 110 TRP TRP H . n B 2 111 GLY 111 111 111 GLY GLY H . n B 2 112 ALA 112 112 112 ALA ALA H . n B 2 113 GLY 113 113 113 GLY GLY H . n B 2 114 THR 114 114 114 THR THR H . n B 2 115 ALA 115 115 115 ALA ALA H . n B 2 116 VAL 116 116 116 VAL VAL H . n B 2 117 THR 117 117 117 THR THR H . n B 2 118 VAL 118 118 118 VAL VAL H . n B 2 119 SER 119 119 119 SER SER H . n B 2 120 SER 120 120 120 SER SER H . n C 3 1 ASP 1 1 1 ASP ASP L . n C 3 2 ILE 2 2 2 ILE ILE L . n C 3 3 VAL 3 3 3 VAL VAL L . n C 3 4 MET 4 4 4 MET MET L . n C 3 5 SER 5 5 5 SER SER L . n C 3 6 GLN 6 6 6 GLN GLN L . n C 3 7 SER 7 7 7 SER SER L . n C 3 8 PRO 8 8 8 PRO PRO L . n C 3 9 SER 9 9 9 SER SER L . n C 3 10 SER 10 10 10 SER SER L . n C 3 11 LEU 11 11 11 LEU LEU L . n C 3 12 ALA 12 12 12 ALA ALA L . n C 3 13 VAL 13 13 13 VAL VAL L . n C 3 14 SER 14 14 14 SER SER L . n C 3 15 ALA 15 15 15 ALA ALA L . n C 3 16 GLY 16 16 16 GLY GLY L . n C 3 17 GLU 17 17 17 GLU GLU L . n C 3 18 LYS 18 18 18 LYS LYS L . n C 3 19 VAL 19 19 19 VAL VAL L . n C 3 20 THR 20 20 20 THR THR L . n C 3 21 MET 21 21 21 MET MET L . n C 3 22 ASN 22 22 22 ASN ASN L . n C 3 23 CYS 23 23 23 CYS CYS L . n C 3 24 LYS 24 24 24 LYS LYS L . n C 3 25 SER 25 25 25 SER SER L . n C 3 26 SER 26 26 26 SER SER L . n C 3 27 GLN 27 27 27 GLN GLN L . n C 3 28 SER 28 28 28 SER SER L . n C 3 29 LEU 29 29 29 LEU LEU L . n C 3 30 LEU 30 30 30 LEU LEU L . n C 3 31 ASN 31 31 31 ASN ASN L . n C 3 32 SER 32 32 32 SER SER L . n C 3 33 ARG 33 33 33 ARG ARG L . n C 3 34 THR 34 34 34 THR THR L . n C 3 35 ARG 35 35 35 ARG ARG L . n C 3 36 LYS 36 36 36 LYS LYS L . n C 3 37 ASN 37 37 37 ASN ASN L . n C 3 38 TYR 38 38 38 TYR TYR L . n C 3 39 LEU 39 39 39 LEU LEU L . n C 3 40 ALA 40 40 40 ALA ALA L . n C 3 41 TRP 41 41 41 TRP TRP L . n C 3 42 TYR 42 42 42 TYR TYR L . n C 3 43 GLN 43 43 43 GLN GLN L . n C 3 44 GLN 44 44 44 GLN GLN L . n C 3 45 LYS 45 45 45 LYS LYS L . n C 3 46 PRO 46 46 46 PRO PRO L . n C 3 47 GLY 47 47 47 GLY GLY L . n C 3 48 GLN 48 48 48 GLN GLN L . n C 3 49 SER 49 49 49 SER SER L . n C 3 50 PRO 50 50 50 PRO PRO L . n C 3 51 LYS 51 51 51 LYS LYS L . n C 3 52 LEU 52 52 52 LEU LEU L . n C 3 53 LEU 53 53 53 LEU LEU L . n C 3 54 ILE 54 54 54 ILE ILE L . n C 3 55 TYR 55 55 55 TYR TYR L . n C 3 56 TRP 56 56 56 TRP TRP L . n C 3 57 ALA 57 57 57 ALA ALA L . n C 3 58 SER 58 58 58 SER SER L . n C 3 59 THR 59 59 59 THR THR L . n C 3 60 ARG 60 60 60 ARG ARG L . n C 3 61 GLU 61 61 61 GLU GLU L . n C 3 62 SER 62 62 62 SER SER L . n C 3 63 GLY 63 63 63 GLY GLY L . n C 3 64 VAL 64 64 64 VAL VAL L . n C 3 65 PRO 65 65 65 PRO PRO L . n C 3 66 ASP 66 66 66 ASP ASP L . n C 3 67 ARG 67 67 67 ARG ARG L . n C 3 68 PHE 68 68 68 PHE PHE L . n C 3 69 THR 69 69 69 THR THR L . n C 3 70 GLY 70 70 70 GLY GLY L . n C 3 71 SER 71 71 71 SER SER L . n C 3 72 GLY 72 72 72 GLY GLY L . n C 3 73 SER 73 73 73 SER SER L . n C 3 74 GLY 74 74 74 GLY GLY L . n C 3 75 THR 75 75 75 THR THR L . n C 3 76 ASP 76 76 76 ASP ASP L . n C 3 77 PHE 77 77 77 PHE PHE L . n C 3 78 THR 78 78 78 THR THR L . n C 3 79 LEU 79 79 79 LEU LEU L . n C 3 80 THR 80 80 80 THR THR L . n C 3 81 ILE 81 81 81 ILE ILE L . n C 3 82 SER 82 82 82 SER SER L . n C 3 83 SER 83 83 83 SER SER L . n C 3 84 VAL 84 84 84 VAL VAL L . n C 3 85 GLN 85 85 85 GLN GLN L . n C 3 86 ALA 86 86 86 ALA ALA L . n C 3 87 GLU 87 87 87 GLU GLU L . n C 3 88 ASP 88 88 88 ASP ASP L . n C 3 89 LEU 89 89 89 LEU LEU L . n C 3 90 ALA 90 90 90 ALA ALA L . n C 3 91 PHE 91 91 91 PHE PHE L . n C 3 92 TYR 92 92 92 TYR TYR L . n C 3 93 TYR 93 93 93 TYR TYR L . n C 3 94 CYS 94 94 94 CYS CYS L . n C 3 95 LYS 95 95 95 LYS LYS L . n C 3 96 GLN 96 96 96 GLN GLN L . n C 3 97 SER 97 97 97 SER SER L . n C 3 98 TYR 98 98 98 TYR TYR L . n C 3 99 ASN 99 99 99 ASN ASN L . n C 3 100 LEU 100 100 100 LEU LEU L . n C 3 101 PRO 101 101 101 PRO PRO L . n C 3 102 THR 102 102 102 THR THR L . n C 3 103 PHE 103 103 103 PHE PHE L . n C 3 104 GLY 104 104 104 GLY GLY L . n C 3 105 GLY 105 105 105 GLY GLY L . n C 3 106 GLY 106 106 106 GLY GLY L . n C 3 107 THR 107 107 107 THR THR L . n C 3 108 LYS 108 108 108 LYS LYS L . n C 3 109 LEU 109 109 109 LEU LEU L . n C 3 110 GLU 110 110 110 GLU GLU L . n C 3 111 ILE 111 111 111 ILE ILE L . n C 3 112 LYS 112 112 112 LYS LYS L . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7YP2 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 7YP2 _struct.title 'Cryo-EM structure of EBV gHgL-gp42 in complex with mAb 6H2 (localized refinement)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7YP2 _struct_keywords.text 'EBV, Cryo-EM, Glycoprotein, gHgL-gp42 complex, Antibody, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP A0A385J8N2_EBVG A0A385J8N2 ? 1 ;MEELGHLTTEKQEYALRLATVGYPKAGVYSGLIGGATSVLLSAYNRHPLFQPLHTVMRETLFIGSHVVLRELRLNVTTQG PNLALYQLLSTALCSALEIGEVLRGLALGTESGLFSPCYLSLRFDLTRDKLLSMAPQEATLDQAAVSNAVDGFLGRLSLE REDRDAWHLPAYKCVDRLDKVLMIIPLINVTFIISSDREVRGSALYEASTTYLSSSLFLSPVIMNKCSQGAVAGEPRQIP KIQNFTRTQKSCIFCGFALLSYDEKEGLETTTYITSQEVQNSILSSNYFDFDNLHVHYLLLTTNGTVMEIAGLY ; 361 2 PDB 7YP2 7YP2 ? 2 ? 1 3 PDB 7YP2 7YP2 ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7YP2 A 1 ? 314 ? A0A385J8N2 361 ? 674 ? 361 674 2 2 7YP2 H 1 ? 120 ? 7YP2 1 ? 120 ? 1 120 3 3 7YP2 L 1 ? 112 ? 7YP2 1 ? 112 ? 1 112 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4160 ? 1 MORE -15 ? 1 'SSA (A^2)' 23990 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 9 ? TYR A 23 ? THR A 369 TYR A 383 1 ? 15 HELX_P HELX_P2 AA2 TYR A 29 ? GLY A 31 ? TYR A 389 GLY A 391 5 ? 3 HELX_P HELX_P3 AA3 LEU A 32 ? ASN A 45 ? LEU A 392 ASN A 405 1 ? 14 HELX_P HELX_P4 AA4 VAL A 56 ? GLY A 64 ? VAL A 416 GLY A 424 1 ? 9 HELX_P HELX_P5 AA5 SER A 65 ? ARG A 70 ? SER A 425 ARG A 430 1 ? 6 HELX_P HELX_P6 AA6 GLY A 80 ? LEU A 93 ? GLY A 440 LEU A 453 1 ? 14 HELX_P HELX_P7 AA7 SER A 95 ? GLY A 109 ? SER A 455 GLY A 469 1 ? 15 HELX_P HELX_P8 AA8 SER A 116 ? LEU A 120 ? SER A 476 LEU A 480 5 ? 5 HELX_P HELX_P9 AA9 THR A 127 ? LEU A 132 ? THR A 487 LEU A 492 1 ? 6 HELX_P HELX_P10 AB1 ASP A 142 ? LEU A 157 ? ASP A 502 LEU A 517 1 ? 16 HELX_P HELX_P11 AB2 GLU A 160 ? ARG A 164 ? GLU A 520 ARG A 524 5 ? 5 HELX_P HELX_P12 AB3 LEU A 169 ? CYS A 174 ? LEU A 529 CYS A 534 5 ? 6 HELX_P HELX_P13 AB4 ARG A 177 ? ASP A 179 ? ARG A 537 ASP A 539 5 ? 3 HELX_P HELX_P14 AB5 SER A 276 ? SER A 285 ? SER A 636 SER A 645 1 ? 10 HELX_P HELX_P15 AB6 GLN C 85 ? LEU C 89 ? GLN L 85 LEU L 89 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 94 SG ? ? ? 1_555 A CYS 118 SG ? ? A CYS 454 A CYS 478 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf2 disulf ? ? A CYS 174 SG ? ? ? 1_555 A CYS 227 SG ? ? A CYS 534 A CYS 587 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf3 disulf ? ? A CYS 252 SG ? ? ? 1_555 A CYS 255 SG ? ? A CYS 612 A CYS 615 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf4 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG ? ? H CYS 22 H CYS 96 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf5 disulf ? ? C CYS 23 SG ? ? ? 1_555 C CYS 94 SG ? ? L CYS 23 L CYS 94 1_555 ? ? ? ? ? ? ? 2.033 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 7 _struct_mon_prot_cis.label_asym_id C _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 7 _struct_mon_prot_cis.auth_asym_id L _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 8 _struct_mon_prot_cis.pdbx_label_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 8 _struct_mon_prot_cis.pdbx_auth_asym_id_2 L _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -4.21 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 2 ? AA3 ? 5 ? AA4 ? 4 ? AA5 ? 2 ? AA6 ? 4 ? AA7 ? 6 ? AA8 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA7 1 2 ? parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA7 4 5 ? anti-parallel AA7 5 6 ? anti-parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 181 ? PRO A 186 ? VAL A 541 PRO A 546 AA1 2 VAL A 190 ? SER A 195 ? VAL A 550 SER A 555 AA1 3 PHE A 218 ? ILE A 223 ? PHE A 578 ILE A 583 AA2 1 TYR A 206 ? GLU A 207 ? TYR A 566 GLU A 567 AA2 2 ARG A 237 ? GLN A 238 ? ARG A 597 GLN A 598 AA3 1 LYS A 241 ? ILE A 242 ? LYS A 601 ILE A 602 AA3 2 VAL A 307 ? ILE A 310 ? VAL A 667 ILE A 670 AA3 3 VAL A 296 ? LEU A 301 ? VAL A 656 LEU A 661 AA3 4 SER A 261 ? ASP A 263 ? SER A 621 ASP A 623 AA3 5 GLY A 267 ? THR A 270 ? GLY A 627 THR A 630 AA4 1 LEU B 5 ? SER B 7 ? LEU H 5 SER H 7 AA4 2 SER B 17 ? ALA B 23 ? SER H 17 ALA H 23 AA4 3 THR B 78 ? SER B 84 ? THR H 78 SER H 84 AA4 4 PHE B 68 ? ASP B 73 ? PHE H 68 ASP H 73 AA5 1 GLY B 10 ? VAL B 12 ? GLY H 10 VAL H 12 AA5 2 VAL B 116 ? VAL B 118 ? VAL H 116 VAL H 118 AA6 1 ILE B 58 ? TYR B 60 ? ILE H 58 TYR H 60 AA6 2 GLU B 46 ? ILE B 51 ? GLU H 46 ILE H 51 AA6 3 TRP B 33 ? ARG B 38 ? TRP H 33 ARG H 38 AA6 4 TYR B 94 ? SER B 99 ? TYR H 94 SER H 99 AA7 1 SER C 10 ? VAL C 13 ? SER L 10 VAL L 13 AA7 2 THR C 107 ? ILE C 111 ? THR L 107 ILE L 111 AA7 3 PHE C 91 ? LYS C 95 ? PHE L 91 LYS L 95 AA7 4 ALA C 40 ? GLN C 44 ? ALA L 40 GLN L 44 AA7 5 LYS C 51 ? TYR C 55 ? LYS L 51 TYR L 55 AA7 6 THR C 59 ? ARG C 60 ? THR L 59 ARG L 60 AA8 1 VAL C 19 ? LYS C 24 ? VAL L 19 LYS L 24 AA8 2 ASP C 76 ? ILE C 81 ? ASP L 76 ILE L 81 AA8 3 PHE C 68 ? GLY C 72 ? PHE L 68 GLY L 72 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 185 ? N ILE A 545 O PHE A 192 ? O PHE A 552 AA1 2 3 N SER A 195 ? N SER A 555 O PHE A 218 ? O PHE A 578 AA2 1 2 N GLU A 207 ? N GLU A 567 O ARG A 237 ? O ARG A 597 AA3 1 2 N ILE A 242 ? N ILE A 602 O GLU A 309 ? O GLU A 669 AA3 2 3 O MET A 308 ? O MET A 668 N LEU A 300 ? N LEU A 660 AA3 3 4 O HIS A 297 ? O HIS A 657 N TYR A 262 ? N TYR A 622 AA3 4 5 N SER A 261 ? N SER A 621 O THR A 270 ? O THR A 630 AA4 1 2 N LEU B 5 ? N LEU H 5 O ALA B 23 ? O ALA H 23 AA4 2 3 N LEU B 20 ? N LEU H 20 O LEU B 81 ? O LEU H 81 AA4 3 4 O TYR B 80 ? O TYR H 80 N SER B 71 ? N SER H 71 AA5 1 2 N VAL B 12 ? N VAL H 12 O THR B 117 ? O THR H 117 AA6 1 2 O ASN B 59 ? O ASN H 59 N GLU B 50 ? N GLU H 50 AA6 2 3 O GLU B 46 ? O GLU H 46 N ARG B 38 ? N ARG H 38 AA6 3 4 N VAL B 37 ? N VAL H 37 O TYR B 95 ? O TYR H 95 AA7 1 2 N VAL C 13 ? N VAL L 13 O GLU C 110 ? O GLU L 110 AA7 2 3 O THR C 107 ? O THR L 107 N TYR C 92 ? N TYR L 92 AA7 3 4 O TYR C 93 ? O TYR L 93 N TYR C 42 ? N TYR L 42 AA7 4 5 N TRP C 41 ? N TRP L 41 O LEU C 53 ? O LEU L 53 AA7 5 6 N TYR C 55 ? N TYR L 55 O THR C 59 ? O THR L 59 AA8 1 2 N CYS C 23 ? N CYS L 23 O PHE C 77 ? O PHE L 77 AA8 2 3 O THR C 78 ? O THR L 78 N SER C 71 ? N SER L 71 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 363 ? ? -95.86 56.09 2 1 LEU A 517 ? ? -91.66 51.85 3 1 TRP A 527 ? ? 75.35 -5.70 4 1 ASN A 549 ? ? 67.87 -1.81 5 1 TYR A 572 ? ? -90.98 -159.39 6 1 CYS A 612 ? ? -100.84 77.54 7 1 PHE A 614 ? ? 67.64 -7.16 8 1 SER H 119 ? ? -165.70 -169.50 9 1 ASN L 37 ? ? 58.75 70.02 10 1 LEU L 53 ? ? -94.26 -62.56 11 1 ALA L 57 ? ? 69.90 -10.66 12 1 GLU L 87 ? ? -99.48 35.99 13 1 ASP L 88 ? ? -141.50 14.49 # _em_3d_fitting.entry_id 7YP2 _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol ? _em_3d_fitting.ref_space ? _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 7YP2 _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 402382 _em_3d_reconstruction.resolution 3.52 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7.4 _em_buffer.specimen_id 1 _em_buffer.name ? # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.details _em_entity_assembly.name _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.entity_id_list _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details 1 0 ? 'EBV gHgL-gp42 in complex with mAb 6H2' RECOMBINANT COMPLEX '1, 2, 3' ? ? 2 1 ? gH RECOMBINANT COMPLEX 1 ? ? 3 1 ? 6H2 RECOMBINANT COMPLEX 2,3 ? ? # _em_imaging.id 1 _em_imaging.entry_id 7YP2 _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TECNAI F30' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max 3000 _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.entry_id 7YP2 _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7YP2 _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # loop_ _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue 1 2 ? ? 10376 ? ? 'Human gammaherpesvirus 4' ? ? 2 3 ? ? 10090 ? ? 'Mus musculus' ? ? # loop_ _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain 1 2 ? 9606 'Homo sapiens' ? ? 2 3 ? 9606 'Homo sapiens' ? ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 60.0 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? _em_image_recording.avg_electron_dose_per_subtomogram ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'SYMMETRY DETERMINATION' ? ? ? 1 1 1 2 'IMAGE ACQUISITION' ? ? ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? ? ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? ? ? ? ? ? 8 'MODEL REFINEMENT' ? ? ? ? ? ? 9 OTHER ? ? ? ? ? ? 10 'INITIAL EULER ASSIGNMENT' ? ? ? 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? ? ? 1 ? ? 12 CLASSIFICATION ? ? ? 1 ? ? 13 RECONSTRUCTION ? ? ? 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 7YP2 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_