data_7YRX # _entry.id 7YRX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7YRX pdb_00007yrx 10.2210/pdb7yrx/pdb WWPDB D_1300031524 ? ? BMRB 36503 ? 10.13018/BMR36503 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-08-16 2 'Structure model' 1 1 2024-09-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' 13 2 'Structure model' '_database_2.pdbx_DOI' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 7YRX _pdbx_database_status.recvd_initial_deposition_date 2022-08-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Solution structures of a disulfide-directed multicyclic peptide with affinity for HER3' _pdbx_database_related.db_id 36503 _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 2 _pdbx_contact_author.email chlwu@xmu.edu.cn _pdbx_contact_author.name_first Chuanliu _pdbx_contact_author.name_last Wu _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-2946-7299 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Fan, S.H.' 1 ? 'Wu, C.L.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 145 _citation.language ? _citation.page_first 1964 _citation.page_last 1972 _citation.title 'Disulfide-Directed Multicyclic Peptide Libraries for the Discovery of Peptide Ligands and Drugs.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacs.2c12462 _citation.pdbx_database_id_PubMed 36633218 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lu, S.' 1 ? primary 'Fan, S.' 2 ? primary 'Xiao, S.' 3 ? primary 'Li, J.' 4 ? primary 'Zhang, S.' 5 ? primary 'Wu, Y.' 6 ? primary 'Kong, C.' 7 ? primary 'Zhuang, J.' 8 ? primary 'Liu, H.' 9 ? primary 'Zhao, Y.' 10 0000-0001-9349-1213 primary 'Wu, C.' 11 0000-0003-2946-7299 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description LH3 _entity.formula_weight 3440.007 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code CPALCSHSCRSLKLCNRLLPTACPDVCDDDW _entity_poly.pdbx_seq_one_letter_code_can CPALCSHSCRSLKLCNRLLPTACPDVCDDDW _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 CYS n 1 2 PRO n 1 3 ALA n 1 4 LEU n 1 5 CYS n 1 6 SER n 1 7 HIS n 1 8 SER n 1 9 CYS n 1 10 ARG n 1 11 SER n 1 12 LEU n 1 13 LYS n 1 14 LEU n 1 15 CYS n 1 16 ASN n 1 17 ARG n 1 18 LEU n 1 19 LEU n 1 20 PRO n 1 21 THR n 1 22 ALA n 1 23 CYS n 1 24 PRO n 1 25 ASP n 1 26 VAL n 1 27 CYS n 1 28 ASP n 1 29 ASP n 1 30 ASP n 1 31 TRP n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 31 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 CYS 1 1 1 CYS CYS A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 CYS 5 5 5 CYS CYS A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 HIS 7 7 7 HIS HIS A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 CYS 9 9 9 CYS CYS A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 CYS 15 15 15 CYS CYS A . n A 1 16 ASN 16 16 16 ASN ASN A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 CYS 23 23 23 CYS CYS A . n A 1 24 PRO 24 24 24 PRO PRO A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 CYS 27 27 27 CYS CYS A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 TRP 31 31 31 TRP TRP A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7YRX _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 7YRX _struct.title 'Solution structures of a disulfide-directed multicyclic peptide with affinity for HER3' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7YRX _struct_keywords.text 'disulfide-rich, HER3, PEPTIDE BINDING PROTEIN' _struct_keywords.pdbx_keywords 'PEPTIDE BINDING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7YRX _struct_ref.pdbx_db_accession 7YRX _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7YRX _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 31 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 7YRX _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 31 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 31 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 2 ? HIS A 7 ? PRO A 2 HIS A 7 1 ? 6 HELX_P HELX_P2 AA2 SER A 8 ? ARG A 10 ? SER A 8 ARG A 10 5 ? 3 HELX_P HELX_P3 AA3 SER A 11 ? LEU A 19 ? SER A 11 LEU A 19 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 1 SG ? ? ? 1_555 A CYS 23 SG ? ? A CYS 1 A CYS 23 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf2 disulf ? ? A CYS 5 SG ? ? ? 1_555 A CYS 15 SG ? ? A CYS 5 A CYS 15 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? A CYS 9 SG ? ? ? 1_555 A CYS 27 SG ? ? A CYS 9 A CYS 27 1_555 ? ? ? ? ? ? ? 2.029 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 9 ? ? -37.81 -28.45 2 1 ASP A 25 ? ? -84.84 45.48 3 2 SER A 8 ? ? -88.02 33.65 4 2 ASP A 25 ? ? -85.55 44.78 5 3 CYS A 9 ? ? -36.21 -31.12 6 4 SER A 8 ? ? -95.66 31.98 7 4 CYS A 9 ? ? -42.82 -17.84 8 4 ASP A 25 ? ? -91.03 46.58 9 5 CYS A 9 ? ? -37.03 -33.17 10 5 ASP A 25 ? ? -84.56 44.68 11 6 CYS A 9 ? ? -40.92 -19.82 12 6 ASP A 25 ? ? -88.76 46.97 13 7 SER A 8 ? ? -80.98 35.76 14 7 CYS A 9 ? ? -39.49 -25.93 15 8 CYS A 9 ? ? -38.87 -26.52 16 8 ASP A 25 ? ? -85.51 43.55 17 9 SER A 8 ? ? -85.05 34.89 18 9 CYS A 9 ? ? -39.45 -24.59 19 9 ASP A 25 ? ? -85.78 43.39 20 10 SER A 8 ? ? -90.25 35.66 21 10 CYS A 9 ? ? -38.23 -29.60 22 10 ASP A 25 ? ? -84.33 44.79 23 11 SER A 8 ? ? -97.30 35.92 24 11 CYS A 9 ? ? -38.69 -30.97 25 11 ASP A 25 ? ? -81.26 45.50 26 12 SER A 8 ? ? -86.56 35.78 27 12 CYS A 9 ? ? -38.43 -29.89 28 12 ASP A 25 ? ? -82.47 45.42 29 13 CYS A 9 ? ? -37.03 -29.90 30 13 ASP A 25 ? ? -83.47 44.34 31 14 SER A 8 ? ? -78.56 37.21 32 14 CYS A 9 ? ? -38.77 -28.86 33 14 ASP A 25 ? ? -76.29 46.98 34 15 ASP A 25 ? ? -80.42 46.42 # _pdbx_nmr_ensemble.entry_id 7YRX _pdbx_nmr_ensemble.conformers_calculated_total_number 150 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 7YRX _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1 mM LH3, 50% perdeuterated acetonitrile and 50% H2O' _pdbx_nmr_sample_details.solvent_system '50% perdeuterated acetonitrile and 50% H2O' _pdbx_nmr_sample_details.label LH3 _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component LH3 _pdbx_nmr_exptl_sample.concentration 1 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.label condition _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-13C HSQC' 1 anisotropic 2 1 1 '2D 1H-15N HSQC' 1 anisotropic 3 1 1 '2D 1H-1H NOESY' 1 anisotropic 4 1 1 '2D 1H-1H TOCSY' 1 anisotropic # _pdbx_nmr_refine.entry_id 7YRX _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement CNS ? 'Brunger A. T. et.al.' 2 'structure calculation' ARIA ? ;Linge, O'Donoghue and Nilges ; 3 'chemical shift assignment' NMRFAM-SPARKY ? 'Lee W, Tonelli M, Markley JL' 4 collection TopSpin ? 'Bruker Biospin' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 HIS N N N N 88 HIS CA C N S 89 HIS C C N N 90 HIS O O N N 91 HIS CB C N N 92 HIS CG C Y N 93 HIS ND1 N Y N 94 HIS CD2 C Y N 95 HIS CE1 C Y N 96 HIS NE2 N Y N 97 HIS OXT O N N 98 HIS H H N N 99 HIS H2 H N N 100 HIS HA H N N 101 HIS HB2 H N N 102 HIS HB3 H N N 103 HIS HD1 H N N 104 HIS HD2 H N N 105 HIS HE1 H N N 106 HIS HE2 H N N 107 HIS HXT H N N 108 LEU N N N N 109 LEU CA C N S 110 LEU C C N N 111 LEU O O N N 112 LEU CB C N N 113 LEU CG C N N 114 LEU CD1 C N N 115 LEU CD2 C N N 116 LEU OXT O N N 117 LEU H H N N 118 LEU H2 H N N 119 LEU HA H N N 120 LEU HB2 H N N 121 LEU HB3 H N N 122 LEU HG H N N 123 LEU HD11 H N N 124 LEU HD12 H N N 125 LEU HD13 H N N 126 LEU HD21 H N N 127 LEU HD22 H N N 128 LEU HD23 H N N 129 LEU HXT H N N 130 LYS N N N N 131 LYS CA C N S 132 LYS C C N N 133 LYS O O N N 134 LYS CB C N N 135 LYS CG C N N 136 LYS CD C N N 137 LYS CE C N N 138 LYS NZ N N N 139 LYS OXT O N N 140 LYS H H N N 141 LYS H2 H N N 142 LYS HA H N N 143 LYS HB2 H N N 144 LYS HB3 H N N 145 LYS HG2 H N N 146 LYS HG3 H N N 147 LYS HD2 H N N 148 LYS HD3 H N N 149 LYS HE2 H N N 150 LYS HE3 H N N 151 LYS HZ1 H N N 152 LYS HZ2 H N N 153 LYS HZ3 H N N 154 LYS HXT H N N 155 PRO N N N N 156 PRO CA C N S 157 PRO C C N N 158 PRO O O N N 159 PRO CB C N N 160 PRO CG C N N 161 PRO CD C N N 162 PRO OXT O N N 163 PRO H H N N 164 PRO HA H N N 165 PRO HB2 H N N 166 PRO HB3 H N N 167 PRO HG2 H N N 168 PRO HG3 H N N 169 PRO HD2 H N N 170 PRO HD3 H N N 171 PRO HXT H N N 172 SER N N N N 173 SER CA C N S 174 SER C C N N 175 SER O O N N 176 SER CB C N N 177 SER OG O N N 178 SER OXT O N N 179 SER H H N N 180 SER H2 H N N 181 SER HA H N N 182 SER HB2 H N N 183 SER HB3 H N N 184 SER HG H N N 185 SER HXT H N N 186 THR N N N N 187 THR CA C N S 188 THR C C N N 189 THR O O N N 190 THR CB C N R 191 THR OG1 O N N 192 THR CG2 C N N 193 THR OXT O N N 194 THR H H N N 195 THR H2 H N N 196 THR HA H N N 197 THR HB H N N 198 THR HG1 H N N 199 THR HG21 H N N 200 THR HG22 H N N 201 THR HG23 H N N 202 THR HXT H N N 203 TRP N N N N 204 TRP CA C N S 205 TRP C C N N 206 TRP O O N N 207 TRP CB C N N 208 TRP CG C Y N 209 TRP CD1 C Y N 210 TRP CD2 C Y N 211 TRP NE1 N Y N 212 TRP CE2 C Y N 213 TRP CE3 C Y N 214 TRP CZ2 C Y N 215 TRP CZ3 C Y N 216 TRP CH2 C Y N 217 TRP OXT O N N 218 TRP H H N N 219 TRP H2 H N N 220 TRP HA H N N 221 TRP HB2 H N N 222 TRP HB3 H N N 223 TRP HD1 H N N 224 TRP HE1 H N N 225 TRP HE3 H N N 226 TRP HZ2 H N N 227 TRP HZ3 H N N 228 TRP HH2 H N N 229 TRP HXT H N N 230 VAL N N N N 231 VAL CA C N S 232 VAL C C N N 233 VAL O O N N 234 VAL CB C N N 235 VAL CG1 C N N 236 VAL CG2 C N N 237 VAL OXT O N N 238 VAL H H N N 239 VAL H2 H N N 240 VAL HA H N N 241 VAL HB H N N 242 VAL HG11 H N N 243 VAL HG12 H N N 244 VAL HG13 H N N 245 VAL HG21 H N N 246 VAL HG22 H N N 247 VAL HG23 H N N 248 VAL HXT H N N 249 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 HIS N CA sing N N 83 HIS N H sing N N 84 HIS N H2 sing N N 85 HIS CA C sing N N 86 HIS CA CB sing N N 87 HIS CA HA sing N N 88 HIS C O doub N N 89 HIS C OXT sing N N 90 HIS CB CG sing N N 91 HIS CB HB2 sing N N 92 HIS CB HB3 sing N N 93 HIS CG ND1 sing Y N 94 HIS CG CD2 doub Y N 95 HIS ND1 CE1 doub Y N 96 HIS ND1 HD1 sing N N 97 HIS CD2 NE2 sing Y N 98 HIS CD2 HD2 sing N N 99 HIS CE1 NE2 sing Y N 100 HIS CE1 HE1 sing N N 101 HIS NE2 HE2 sing N N 102 HIS OXT HXT sing N N 103 LEU N CA sing N N 104 LEU N H sing N N 105 LEU N H2 sing N N 106 LEU CA C sing N N 107 LEU CA CB sing N N 108 LEU CA HA sing N N 109 LEU C O doub N N 110 LEU C OXT sing N N 111 LEU CB CG sing N N 112 LEU CB HB2 sing N N 113 LEU CB HB3 sing N N 114 LEU CG CD1 sing N N 115 LEU CG CD2 sing N N 116 LEU CG HG sing N N 117 LEU CD1 HD11 sing N N 118 LEU CD1 HD12 sing N N 119 LEU CD1 HD13 sing N N 120 LEU CD2 HD21 sing N N 121 LEU CD2 HD22 sing N N 122 LEU CD2 HD23 sing N N 123 LEU OXT HXT sing N N 124 LYS N CA sing N N 125 LYS N H sing N N 126 LYS N H2 sing N N 127 LYS CA C sing N N 128 LYS CA CB sing N N 129 LYS CA HA sing N N 130 LYS C O doub N N 131 LYS C OXT sing N N 132 LYS CB CG sing N N 133 LYS CB HB2 sing N N 134 LYS CB HB3 sing N N 135 LYS CG CD sing N N 136 LYS CG HG2 sing N N 137 LYS CG HG3 sing N N 138 LYS CD CE sing N N 139 LYS CD HD2 sing N N 140 LYS CD HD3 sing N N 141 LYS CE NZ sing N N 142 LYS CE HE2 sing N N 143 LYS CE HE3 sing N N 144 LYS NZ HZ1 sing N N 145 LYS NZ HZ2 sing N N 146 LYS NZ HZ3 sing N N 147 LYS OXT HXT sing N N 148 PRO N CA sing N N 149 PRO N CD sing N N 150 PRO N H sing N N 151 PRO CA C sing N N 152 PRO CA CB sing N N 153 PRO CA HA sing N N 154 PRO C O doub N N 155 PRO C OXT sing N N 156 PRO CB CG sing N N 157 PRO CB HB2 sing N N 158 PRO CB HB3 sing N N 159 PRO CG CD sing N N 160 PRO CG HG2 sing N N 161 PRO CG HG3 sing N N 162 PRO CD HD2 sing N N 163 PRO CD HD3 sing N N 164 PRO OXT HXT sing N N 165 SER N CA sing N N 166 SER N H sing N N 167 SER N H2 sing N N 168 SER CA C sing N N 169 SER CA CB sing N N 170 SER CA HA sing N N 171 SER C O doub N N 172 SER C OXT sing N N 173 SER CB OG sing N N 174 SER CB HB2 sing N N 175 SER CB HB3 sing N N 176 SER OG HG sing N N 177 SER OXT HXT sing N N 178 THR N CA sing N N 179 THR N H sing N N 180 THR N H2 sing N N 181 THR CA C sing N N 182 THR CA CB sing N N 183 THR CA HA sing N N 184 THR C O doub N N 185 THR C OXT sing N N 186 THR CB OG1 sing N N 187 THR CB CG2 sing N N 188 THR CB HB sing N N 189 THR OG1 HG1 sing N N 190 THR CG2 HG21 sing N N 191 THR CG2 HG22 sing N N 192 THR CG2 HG23 sing N N 193 THR OXT HXT sing N N 194 TRP N CA sing N N 195 TRP N H sing N N 196 TRP N H2 sing N N 197 TRP CA C sing N N 198 TRP CA CB sing N N 199 TRP CA HA sing N N 200 TRP C O doub N N 201 TRP C OXT sing N N 202 TRP CB CG sing N N 203 TRP CB HB2 sing N N 204 TRP CB HB3 sing N N 205 TRP CG CD1 doub Y N 206 TRP CG CD2 sing Y N 207 TRP CD1 NE1 sing Y N 208 TRP CD1 HD1 sing N N 209 TRP CD2 CE2 doub Y N 210 TRP CD2 CE3 sing Y N 211 TRP NE1 CE2 sing Y N 212 TRP NE1 HE1 sing N N 213 TRP CE2 CZ2 sing Y N 214 TRP CE3 CZ3 doub Y N 215 TRP CE3 HE3 sing N N 216 TRP CZ2 CH2 doub Y N 217 TRP CZ2 HZ2 sing N N 218 TRP CZ3 CH2 sing Y N 219 TRP CZ3 HZ3 sing N N 220 TRP CH2 HH2 sing N N 221 TRP OXT HXT sing N N 222 VAL N CA sing N N 223 VAL N H sing N N 224 VAL N H2 sing N N 225 VAL CA C sing N N 226 VAL CA CB sing N N 227 VAL CA HA sing N N 228 VAL C O doub N N 229 VAL C OXT sing N N 230 VAL CB CG1 sing N N 231 VAL CB CG2 sing N N 232 VAL CB HB sing N N 233 VAL CG1 HG11 sing N N 234 VAL CG1 HG12 sing N N 235 VAL CG1 HG13 sing N N 236 VAL CG2 HG21 sing N N 237 VAL CG2 HG22 sing N N 238 VAL CG2 HG23 sing N N 239 VAL OXT HXT sing N N 240 # _pdbx_audit_support.funding_organization 'Other government' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE III' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 7YRX _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_