HEADER LYASE 12-AUG-22 7YSL TITLE CRYSTAL STRUCTURE OF D-CYSTEINE DESULFHYDRASE WITH A TRAPPED PLP- TITLE 2 PYRUVATE GEMINAL DIAMINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: D-CYSTEINE DESULFHYDRASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 4.4.1.15; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PECTOBACTERIUM ATROSEPTICUM SCRI1043; SOURCE 3 ORGANISM_TAXID: 218491; SOURCE 4 STRAIN: SCRI 1043 / ATCC BAA-672; SOURCE 5 GENE: ECA1531; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PLP-DEPENDENT ENZYME, D-CYSTEINE DESULFHYDRASE, GEMINAL DIAMINE, KEYWDS 2 LYASE EXPDTA X-RAY DIFFRACTION AUTHOR X.ZHANG,L.WANG,X.XU,X.XING,J.ZHOU REVDAT 3 29-NOV-23 7YSL 1 SEQRES HETNAM REVDAT 2 08-FEB-23 7YSL 1 HELIX ATOM REVDAT 1 14-DEC-22 7YSL 0 JRNL AUTH X.XU,L.YANG,X.ZHANG,X.XING,J.ZHOU JRNL TITL CHARACTERIZATION AND STRUCTURAL BASIS OF D-CYSTEINE JRNL TITL 2 DESULFHYDRASE FROM PECTOBACTERIUM ATROSEPTICUM JRNL REF TETRAHEDRON 33174 2022 JRNL REFN ISSN 0040-4020 JRNL DOI 10.1016/J.TET.2022.133174 REMARK 2 REMARK 2 RESOLUTION. 2.02 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.02 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 70.21 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 46763 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.660 REMARK 3 FREE R VALUE TEST SET COUNT : 2180 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 70.2100 - 5.0900 0.99 3053 153 0.1814 0.1952 REMARK 3 2 5.0900 - 4.0400 1.00 2895 154 0.1407 0.1832 REMARK 3 3 4.0400 - 3.5300 0.81 2338 121 0.1549 0.1721 REMARK 3 4 3.5300 - 3.2100 1.00 2881 146 0.1646 0.1761 REMARK 3 5 3.2100 - 2.9800 1.00 2855 142 0.1714 0.2462 REMARK 3 6 2.9800 - 2.8000 1.00 2854 142 0.1674 0.1959 REMARK 3 7 2.8000 - 2.6600 1.00 2843 140 0.1788 0.2320 REMARK 3 8 2.6600 - 2.5500 1.00 2855 121 0.1789 0.2127 REMARK 3 9 2.5500 - 2.4500 1.00 2859 116 0.1813 0.2543 REMARK 3 10 2.4500 - 2.3600 1.00 2818 140 0.1783 0.2218 REMARK 3 11 2.3600 - 2.2900 1.00 2853 123 0.1762 0.2174 REMARK 3 12 2.2900 - 2.2200 0.79 2225 123 0.1975 0.2798 REMARK 3 13 2.2200 - 2.1600 1.00 2810 146 0.1862 0.2091 REMARK 3 14 2.1600 - 2.1100 1.00 2814 133 0.2018 0.2798 REMARK 3 15 2.1100 - 2.0600 1.00 2804 142 0.2266 0.2809 REMARK 3 16 2.0600 - 2.0200 1.00 2826 138 0.2301 0.2791 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.55 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7YSL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1300031516. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JAN-22 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46857 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.020 REMARK 200 RESOLUTION RANGE LOW (A) : 123.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.02 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.92000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4D97 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CARBOXYLIC ACIDS (SODIUM REMARK 280 FORMATE, AMMONIUM ACETATE, SODIUM CITRATE, POTASSIUM SODIUM REMARK 280 TARTRATE, SODIUM OXAMATE), 0.1 M IMIDAZOLE/MES PH 6.5, 30% (V/V) REMARK 280 PEG 500 MME/PEG 20000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.19000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.54550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.73900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.54550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.19000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.73900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -33 REMARK 465 GLY A -32 REMARK 465 SER A -31 REMARK 465 SER A -30 REMARK 465 HIS A -29 REMARK 465 HIS A -28 REMARK 465 HIS A -27 REMARK 465 HIS A -26 REMARK 465 HIS A -25 REMARK 465 HIS A -24 REMARK 465 SER A -23 REMARK 465 SER A -22 REMARK 465 GLY A -21 REMARK 465 LEU A -20 REMARK 465 VAL A -19 REMARK 465 PRO A -18 REMARK 465 ARG A -17 REMARK 465 GLY A -16 REMARK 465 SER A -15 REMARK 465 HIS A -14 REMARK 465 MET A -13 REMARK 465 ALA A -12 REMARK 465 SER A -11 REMARK 465 MET A -10 REMARK 465 THR A 334 REMARK 465 ALA A 335 REMARK 465 ALA A 336 REMARK 465 GLN A 337 REMARK 465 MET B -33 REMARK 465 GLY B -32 REMARK 465 SER B -31 REMARK 465 SER B -30 REMARK 465 HIS B -29 REMARK 465 HIS B -28 REMARK 465 HIS B -27 REMARK 465 HIS B -26 REMARK 465 HIS B -25 REMARK 465 HIS B -24 REMARK 465 SER B -23 REMARK 465 SER B -22 REMARK 465 GLY B -21 REMARK 465 LEU B -20 REMARK 465 VAL B -19 REMARK 465 PRO B -18 REMARK 465 ARG B -17 REMARK 465 GLY B -16 REMARK 465 SER B -15 REMARK 465 HIS B -14 REMARK 465 MET B -13 REMARK 465 ALA B -12 REMARK 465 SER B -11 REMARK 465 MET B -10 REMARK 465 THR B -9 REMARK 465 GLY B -8 REMARK 465 GLY B -7 REMARK 465 GLN B -6 REMARK 465 GLN B -5 REMARK 465 MET B -4 REMARK 465 GLY B -3 REMARK 465 ARG B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 THR B 334 REMARK 465 ALA B 335 REMARK 465 ALA B 336 REMARK 465 GLN B 337 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 40 42.56 -103.90 REMARK 500 THR A 45 -6.37 81.06 REMARK 500 SER A 111 -159.09 -98.55 REMARK 500 ASP A 133 97.44 -66.04 REMARK 500 THR A 196 -14.11 97.84 REMARK 500 GLN A 212 59.80 -92.97 REMARK 500 ARG A 221 -57.81 -159.43 REMARK 500 TYR A 290 -77.99 -117.89 REMARK 500 THR B 45 -8.29 87.21 REMARK 500 SER B 111 -159.74 -97.56 REMARK 500 THR B 196 -18.48 96.80 REMARK 500 ARG B 221 -60.36 -161.26 REMARK 500 TYR B 290 -76.58 -122.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7YSK RELATED DB: PDB REMARK 900 7YSK IS THE APO FORM OF THIS STRUCTURE DBREF 7YSL A 1 337 UNP Q6D6Z8 Q6D6Z8_PECAS 1 337 DBREF 7YSL B 1 337 UNP Q6D6Z8 Q6D6Z8_PECAS 1 337 SEQADV 7YSL MET A -33 UNP Q6D6Z8 INITIATING METHIONINE SEQADV 7YSL GLY A -32 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL SER A -31 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL SER A -30 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL HIS A -29 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL HIS A -28 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL HIS A -27 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL HIS A -26 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL HIS A -25 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL HIS A -24 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL SER A -23 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL SER A -22 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL GLY A -21 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL LEU A -20 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL VAL A -19 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL PRO A -18 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL ARG A -17 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL GLY A -16 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL SER A -15 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL HIS A -14 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL MET A -13 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL ALA A -12 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL SER A -11 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL MET A -10 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL THR A -9 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL GLY A -8 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL GLY A -7 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL GLN A -6 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL GLN A -5 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL MET A -4 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL GLY A -3 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL ARG A -2 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL GLY A -1 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL SER A 0 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL MET B -33 UNP Q6D6Z8 INITIATING METHIONINE SEQADV 7YSL GLY B -32 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL SER B -31 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL SER B -30 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL HIS B -29 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL HIS B -28 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL HIS B -27 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL HIS B -26 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL HIS B -25 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL HIS B -24 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL SER B -23 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL SER B -22 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL GLY B -21 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL LEU B -20 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL VAL B -19 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL PRO B -18 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL ARG B -17 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL GLY B -16 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL SER B -15 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL HIS B -14 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL MET B -13 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL ALA B -12 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL SER B -11 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL MET B -10 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL THR B -9 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL GLY B -8 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL GLY B -7 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL GLN B -6 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL GLN B -5 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL MET B -4 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL GLY B -3 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL ARG B -2 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL GLY B -1 UNP Q6D6Z8 EXPRESSION TAG SEQADV 7YSL SER B 0 UNP Q6D6Z8 EXPRESSION TAG SEQRES 1 A 371 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 371 LEU VAL PRO ARG GLY SER HIS MET ALA SER MET THR GLY SEQRES 3 A 371 GLY GLN GLN MET GLY ARG GLY SER MET HIS LEU ALA ARG SEQRES 4 A 371 PHE PRO ARG LEU SER LEU GLY HIS PHE PRO THR PRO LEU SEQRES 5 A 371 GLU VAL LEU PRO ASN LEU SER ALA TYR LEU GLY GLY PRO SEQRES 6 A 371 THR ILE TYR ILE LYS ARG ASP ASP ALA THR GLY LEU ALA SEQRES 7 A 371 THR GLY GLY ASN EXA THR ARG LYS LEU GLU PHE LEU LEU SEQRES 8 A 371 ALA ASP ALA GLN GLN GLN GLY ALA ASP VAL ILE ILE THR SEQRES 9 A 371 GLN GLY ALA THR GLN SER ASN HIS VAL ARG GLN THR ILE SEQRES 10 A 371 ALA ALA ALA ALA LYS LEU GLY LEU LYS THR LYS VAL LEU SEQRES 11 A 371 LEU GLU LYS ARG VAL GLU ASP TYR GLY GLU ASP TYR GLN SEQRES 12 A 371 ARG SER GLY ASN VAL LEU LEU ASP ASN LEU LEU GLY GLY SEQRES 13 A 371 ASP ILE ILE ASP HIS LEU PRO ALA GLY THR ASP MET GLN SEQRES 14 A 371 GLN ALA MET GLU THR LEU ALA GLU SER LEU ARG LYS GLU SEQRES 15 A 371 GLY PHE LYS PRO TYR VAL ILE PRO GLY GLY GLY SER SER SEQRES 16 A 371 PRO VAL GLY ALA LEU GLY TYR VAL ALA CYS ALA GLU GLU SEQRES 17 A 371 LEU LEU PHE GLN SER SER GLN GLN ARG LEU ARG ILE ASP SEQRES 18 A 371 HIS ILE VAL HIS ALA THR GLY SER THR GLY THR GLN ALA SEQRES 19 A 371 GLY LEU VAL THR GLY LEU ALA ALA THR HIS SER GLN ILE SEQRES 20 A 371 PRO LEU LEU GLY ILE SER VAL ARG ALA PRO LYS ALA LYS SEQRES 21 A 371 GLN GLU GLU ASN VAL TYR ALA LEU ALA GLN ARG THR TRP SEQRES 22 A 371 GLN LEU LEU GLY ILE PRO GLY GLU LEU PRO ARG SER ALA SEQRES 23 A 371 VAL ARG VAL ASN SER ASP TYR VAL GLY LYS GLY TYR GLY SEQRES 24 A 371 ILE PRO THR GLU GLY THR LEU GLU ALA LEU ARG LEU LEU SEQRES 25 A 371 ALA GLN LEU GLU GLY ILE LEU LEU ASP PRO VAL TYR SER SEQRES 26 A 371 GLY LYS GLY MET ALA GLY LEU ILE ASP LEU ILE ARG GLN SEQRES 27 A 371 GLY HIS PHE ARG ALA ASP GLU ASN ILE VAL PHE ILE HIS SEQRES 28 A 371 THR GLY GLY SER ALA GLY LEU PHE GLY TYR ARG GLN LEU SEQRES 29 A 371 PHE GLU GLN THR ALA ALA GLN SEQRES 1 B 371 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 371 LEU VAL PRO ARG GLY SER HIS MET ALA SER MET THR GLY SEQRES 3 B 371 GLY GLN GLN MET GLY ARG GLY SER MET HIS LEU ALA ARG SEQRES 4 B 371 PHE PRO ARG LEU SER LEU GLY HIS PHE PRO THR PRO LEU SEQRES 5 B 371 GLU VAL LEU PRO ASN LEU SER ALA TYR LEU GLY GLY PRO SEQRES 6 B 371 THR ILE TYR ILE LYS ARG ASP ASP ALA THR GLY LEU ALA SEQRES 7 B 371 THR GLY GLY ASN EXA THR ARG LYS LEU GLU PHE LEU LEU SEQRES 8 B 371 ALA ASP ALA GLN GLN GLN GLY ALA ASP VAL ILE ILE THR SEQRES 9 B 371 GLN GLY ALA THR GLN SER ASN HIS VAL ARG GLN THR ILE SEQRES 10 B 371 ALA ALA ALA ALA LYS LEU GLY LEU LYS THR LYS VAL LEU SEQRES 11 B 371 LEU GLU LYS ARG VAL GLU ASP TYR GLY GLU ASP TYR GLN SEQRES 12 B 371 ARG SER GLY ASN VAL LEU LEU ASP ASN LEU LEU GLY GLY SEQRES 13 B 371 ASP ILE ILE ASP HIS LEU PRO ALA GLY THR ASP MET GLN SEQRES 14 B 371 GLN ALA MET GLU THR LEU ALA GLU SER LEU ARG LYS GLU SEQRES 15 B 371 GLY PHE LYS PRO TYR VAL ILE PRO GLY GLY GLY SER SER SEQRES 16 B 371 PRO VAL GLY ALA LEU GLY TYR VAL ALA CYS ALA GLU GLU SEQRES 17 B 371 LEU LEU PHE GLN SER SER GLN GLN ARG LEU ARG ILE ASP SEQRES 18 B 371 HIS ILE VAL HIS ALA THR GLY SER THR GLY THR GLN ALA SEQRES 19 B 371 GLY LEU VAL THR GLY LEU ALA ALA THR HIS SER GLN ILE SEQRES 20 B 371 PRO LEU LEU GLY ILE SER VAL ARG ALA PRO LYS ALA LYS SEQRES 21 B 371 GLN GLU GLU ASN VAL TYR ALA LEU ALA GLN ARG THR TRP SEQRES 22 B 371 GLN LEU LEU GLY ILE PRO GLY GLU LEU PRO ARG SER ALA SEQRES 23 B 371 VAL ARG VAL ASN SER ASP TYR VAL GLY LYS GLY TYR GLY SEQRES 24 B 371 ILE PRO THR GLU GLY THR LEU GLU ALA LEU ARG LEU LEU SEQRES 25 B 371 ALA GLN LEU GLU GLY ILE LEU LEU ASP PRO VAL TYR SER SEQRES 26 B 371 GLY LYS GLY MET ALA GLY LEU ILE ASP LEU ILE ARG GLN SEQRES 27 B 371 GLY HIS PHE ARG ALA ASP GLU ASN ILE VAL PHE ILE HIS SEQRES 28 B 371 THR GLY GLY SER ALA GLY LEU PHE GLY TYR ARG GLN LEU SEQRES 29 B 371 PHE GLU GLN THR ALA ALA GLN MODRES 7YSL EXA A 49 LYS MODIFIED RESIDUE MODRES 7YSL EXA B 49 LYS MODIFIED RESIDUE HET EXA A 49 30 HET EXA B 49 30 HET FMT A 401 3 HET EDO A 402 4 HET EDO A 403 4 HET FMT A 404 3 HET FMT A 405 3 HET FMT A 406 3 HET EDO A 407 4 HET FMT A 408 3 HET FMT A 409 3 HET FMT A 410 3 HET FMT B 401 3 HET FMT B 402 3 HET FMT B 403 3 HET FMT B 404 3 HET FMT B 405 3 HETNAM EXA N~6~-[(R)-[(E)-(1-CARBOXYETHYLIDENE)AMINO]{3-HYDROXY-2- HETNAM 2 EXA METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL]-L- HETNAM 3 EXA LYSINE HETNAM FMT FORMIC ACID HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 EXA 2(C17 H27 N4 O9 P) FORMUL 3 FMT 12(C H2 O2) FORMUL 4 EDO 3(C2 H6 O2) FORMUL 18 HOH *311(H2 O) HELIX 1 AA1 GLY A -3 ALA A 4 1 8 HELIX 2 AA2 LEU A 21 GLY A 29 1 9 HELIX 3 AA3 ASP A 39 THR A 41 5 3 HELIX 4 AA4 ASN A 48 GLN A 63 1 16 HELIX 5 AA5 SER A 76 LEU A 89 1 14 HELIX 6 AA6 TYR A 104 SER A 111 1 8 HELIX 7 AA7 SER A 111 LEU A 120 1 10 HELIX 8 AA8 ASP A 133 GLU A 148 1 16 HELIX 9 AA9 PRO A 156 SER A 160 5 5 HELIX 10 AB1 SER A 161 GLN A 182 1 22 HELIX 11 AB2 THR A 196 THR A 209 1 14 HELIX 12 AB3 PRO A 223 LEU A 242 1 20 HELIX 13 AB4 PRO A 249 VAL A 253 5 5 HELIX 14 AB5 THR A 268 GLY A 283 1 16 HELIX 15 AB6 TYR A 290 GLN A 304 1 15 HELIX 16 AB7 GLY A 320 GLY A 326 5 7 HELIX 17 AB8 TYR A 327 GLN A 333 1 7 HELIX 18 AB9 LEU B 21 GLY B 29 1 9 HELIX 19 AC1 ASN B 48 GLN B 63 1 16 HELIX 20 AC2 SER B 76 LEU B 89 1 14 HELIX 21 AC3 TYR B 104 SER B 111 1 8 HELIX 22 AC4 SER B 111 LEU B 120 1 10 HELIX 23 AC5 ASP B 133 GLU B 148 1 16 HELIX 24 AC6 PRO B 156 SER B 160 5 5 HELIX 25 AC7 SER B 161 ARG B 183 1 23 HELIX 26 AC8 THR B 196 THR B 209 1 14 HELIX 27 AC9 PRO B 223 LEU B 242 1 20 HELIX 28 AD1 PRO B 249 VAL B 253 5 5 HELIX 29 AD2 THR B 268 GLY B 283 1 16 HELIX 30 AD3 TYR B 290 GLN B 304 1 15 HELIX 31 AD4 GLY B 320 GLY B 326 5 7 HELIX 32 AD5 TYR B 327 GLN B 333 1 7 SHEET 1 AA1 6 LEU A 18 VAL A 20 0 SHEET 2 AA1 6 THR A 32 ARG A 37 -1 O ILE A 35 N GLU A 19 SHEET 3 AA1 6 ASN A 312 HIS A 317 1 O ILE A 313 N TYR A 34 SHEET 4 AA1 6 HIS A 188 THR A 193 1 N HIS A 188 O VAL A 314 SHEET 5 AA1 6 LEU A 215 SER A 219 1 O LEU A 216 N ILE A 189 SHEET 6 AA1 6 VAL A 255 ASN A 256 1 O ASN A 256 N GLY A 217 SHEET 1 AA2 4 ASP A 123 PRO A 129 0 SHEET 2 AA2 4 THR A 93 LYS A 99 1 N LEU A 97 O LEU A 128 SHEET 3 AA2 4 VAL A 67 ALA A 73 1 N ILE A 68 O LYS A 94 SHEET 4 AA2 4 PRO A 152 VAL A 154 1 O TYR A 153 N ILE A 69 SHEET 1 AA3 6 LEU B 18 VAL B 20 0 SHEET 2 AA3 6 THR B 32 ARG B 37 -1 O ILE B 35 N GLU B 19 SHEET 3 AA3 6 ASN B 312 HIS B 317 1 O ILE B 313 N TYR B 34 SHEET 4 AA3 6 HIS B 188 THR B 193 1 N HIS B 188 O VAL B 314 SHEET 5 AA3 6 LEU B 215 SER B 219 1 O ILE B 218 N HIS B 191 SHEET 6 AA3 6 ARG B 254 ASN B 256 1 O ASN B 256 N GLY B 217 SHEET 1 AA4 4 ASP B 123 PRO B 129 0 SHEET 2 AA4 4 THR B 93 LYS B 99 1 N VAL B 95 O ASP B 123 SHEET 3 AA4 4 VAL B 67 ALA B 73 1 N ILE B 68 O LYS B 94 SHEET 4 AA4 4 PRO B 152 VAL B 154 1 O TYR B 153 N ILE B 69 LINK C ASN A 48 N EXA A 49 1555 1555 1.33 LINK C EXA A 49 N THR A 50 1555 1555 1.33 LINK C ASN B 48 N EXA B 49 1555 1555 1.32 LINK C EXA B 49 N THR B 50 1555 1555 1.33 CISPEP 1 PHE A 14 PRO A 15 0 0.16 CISPEP 2 PHE B 14 PRO B 15 0 -2.56 CRYST1 68.380 85.478 123.091 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014624 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011699 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008124 0.00000