HEADER DNA BINDING PROTEIN 19-FEB-22 7YZD TITLE CRYSTAL STRUCTURE OF THE ZEBRAFISH FOXH1 BOUND TO THE TGTTTACT SITE TITLE 2 (FKH MOTIF GTAAACA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: FORKHEAD BOX PROTEIN H1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FORKHEAD ACTIVIN SIGNAL TRANSDUCER 1,FAST-1,SCHMALSPUR COMPND 5 PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'- COMPND 9 D(P*AP*GP*AP*TP*TP*GP*TP*TP*TP*AP*CP*TP*GP*AP*GP*A)-3'); COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'-D(*TP*CP*TP*CP*AP*GP*TP*AP*AP*AP*CP*AP*AP*TP*CP*T)- COMPND 14 3'); COMPND 15 CHAIN: C; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 3 ORGANISM_COMMON: ZEBRAFISH; SOURCE 4 ORGANISM_TAXID: 7955; SOURCE 5 GENE: FOXH1, FAST1, SUR; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 11 ORGANISM_COMMON: ZEBRAFISH; SOURCE 12 ORGANISM_TAXID: 7955; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: DANIO RERIO; SOURCE 16 ORGANISM_COMMON: ZEBRAFISH; SOURCE 17 ORGANISM_TAXID: 7955 KEYWDS TRANSCRIPTION FACTOR, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.PLUTA,M.J.MACIAS REVDAT 3 31-JAN-24 7YZD 1 REMARK REVDAT 2 07-DEC-22 7YZD 1 JRNL REVDAT 1 16-NOV-22 7YZD 0 JRNL AUTH R.PLUTA,E.ARAGON,N.A.PRESCOTT,L.RUIZ,R.A.MEES,B.BAGINSKI, JRNL AUTH 2 J.R.FLOOD,P.MARTIN-MALPARTIDA,J.MASSAGUE,Y.DAVID,M.J.MACIAS JRNL TITL MOLECULAR BASIS FOR DNA RECOGNITION BY THE MATERNAL PIONEER JRNL TITL 2 TRANSCRIPTION FACTOR FOXH1. JRNL REF NAT COMMUN V. 13 7279 2022 JRNL REFN ESSN 2041-1723 JRNL PMID 36435807 JRNL DOI 10.1038/S41467-022-34925-Y REMARK 2 REMARK 2 RESOLUTION. 2.13 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.13 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 62.6 REMARK 3 NUMBER OF REFLECTIONS : 9537 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 479 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.0600 - 3.0800 0.96 4742 257 0.1927 0.2357 REMARK 3 2 3.0800 - 2.4400 0.68 3253 157 0.2751 0.3278 REMARK 3 3 2.4400 - 2.1300 0.23 1063 65 0.2802 0.2775 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.215 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.12 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1691 REMARK 3 ANGLE : 0.777 2416 REMARK 3 CHIRALITY : 0.040 261 REMARK 3 PLANARITY : 0.006 195 REMARK 3 DIHEDRAL : 25.773 679 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 92 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.5671 -23.7871 27.0834 REMARK 3 T TENSOR REMARK 3 T11: 0.2430 T22: 0.2829 REMARK 3 T33: 0.2702 T12: -0.0330 REMARK 3 T13: -0.0104 T23: 0.0127 REMARK 3 L TENSOR REMARK 3 L11: 1.4059 L22: 1.4497 REMARK 3 L33: 2.2567 L12: 0.2467 REMARK 3 L13: 1.1080 L23: -1.1923 REMARK 3 S TENSOR REMARK 3 S11: -0.2157 S12: -0.0346 S13: 0.0600 REMARK 3 S21: 0.1122 S22: 0.0802 S23: 0.3262 REMARK 3 S31: 0.1171 S32: -0.1755 S33: -0.0002 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 120 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.3691 -17.5207 29.1216 REMARK 3 T TENSOR REMARK 3 T11: 0.2327 T22: 0.5116 REMARK 3 T33: -0.0373 T12: -0.0224 REMARK 3 T13: -0.1974 T23: -0.0451 REMARK 3 L TENSOR REMARK 3 L11: 1.3281 L22: 0.3124 REMARK 3 L33: 0.7935 L12: 0.5351 REMARK 3 L13: -0.0938 L23: -0.2506 REMARK 3 S TENSOR REMARK 3 S11: 0.0956 S12: -0.9189 S13: 1.4236 REMARK 3 S21: 0.4346 S22: 0.4472 S23: 0.0857 REMARK 3 S31: -0.9006 S32: -0.1799 S33: 0.1328 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 131 THROUGH 158 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.6684 -21.3604 21.6660 REMARK 3 T TENSOR REMARK 3 T11: 0.2224 T22: 0.3675 REMARK 3 T33: 0.3289 T12: -0.0257 REMARK 3 T13: -0.0293 T23: 0.0628 REMARK 3 L TENSOR REMARK 3 L11: 0.5598 L22: 1.7609 REMARK 3 L33: 2.6406 L12: 0.3556 REMARK 3 L13: -0.9137 L23: 0.5431 REMARK 3 S TENSOR REMARK 3 S11: -0.0886 S12: -0.0536 S13: -0.3529 REMARK 3 S21: -0.2048 S22: 0.1949 S23: 0.1504 REMARK 3 S31: -0.1482 S32: -0.1004 S33: -0.0001 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 159 THROUGH 170 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.1154 -2.7834 19.2820 REMARK 3 T TENSOR REMARK 3 T11: 0.9471 T22: 0.5358 REMARK 3 T33: 0.6619 T12: 0.1985 REMARK 3 T13: 0.0613 T23: 0.1763 REMARK 3 L TENSOR REMARK 3 L11: 0.0140 L22: 0.0941 REMARK 3 L33: 0.0396 L12: -0.0066 REMARK 3 L13: 0.0037 L23: -0.0623 REMARK 3 S TENSOR REMARK 3 S11: 0.3416 S12: 0.0734 S13: 0.1308 REMARK 3 S21: 0.1031 S22: 0.2526 S23: 0.3520 REMARK 3 S31: -0.7524 S32: -1.4964 S33: 0.0005 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 171 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.5109 -16.8442 26.3994 REMARK 3 T TENSOR REMARK 3 T11: 0.4038 T22: 0.7097 REMARK 3 T33: 0.4939 T12: 0.0975 REMARK 3 T13: -0.0234 T23: -0.0490 REMARK 3 L TENSOR REMARK 3 L11: 0.2605 L22: 0.1820 REMARK 3 L33: 0.8409 L12: 0.0645 REMARK 3 L13: -0.1720 L23: -0.3855 REMARK 3 S TENSOR REMARK 3 S11: -0.1322 S12: 0.8078 S13: 1.0277 REMARK 3 S21: 0.3072 S22: 0.5974 S23: 0.2586 REMARK 3 S31: -0.4902 S32: -1.5701 S33: 0.0588 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 179 THROUGH 208 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.2360 -32.9835 30.6928 REMARK 3 T TENSOR REMARK 3 T11: 0.4444 T22: 0.5221 REMARK 3 T33: 0.4644 T12: -0.1216 REMARK 3 T13: 0.1266 T23: 0.0279 REMARK 3 L TENSOR REMARK 3 L11: 0.4838 L22: 0.1684 REMARK 3 L33: 1.0780 L12: 0.0205 REMARK 3 L13: 0.6914 L23: -0.0133 REMARK 3 S TENSOR REMARK 3 S11: -0.6186 S12: -0.2497 S13: -0.7460 REMARK 3 S21: 0.1514 S22: 0.5278 S23: 0.2648 REMARK 3 S31: 0.6020 S32: -0.3181 S33: -0.0004 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 5 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.4947 -7.5441 12.7973 REMARK 3 T TENSOR REMARK 3 T11: 1.0000 T22: 0.3796 REMARK 3 T33: 0.6926 T12: -0.4839 REMARK 3 T13: 0.2466 T23: 0.1123 REMARK 3 L TENSOR REMARK 3 L11: 2.1631 L22: 1.8012 REMARK 3 L33: 1.4804 L12: -0.0815 REMARK 3 L13: 0.9152 L23: -1.4999 REMARK 3 S TENSOR REMARK 3 S11: -0.2677 S12: -0.7274 S13: 0.0300 REMARK 3 S21: -1.1259 S22: 0.9534 S23: -2.4643 REMARK 3 S31: -1.3086 S32: 1.2788 S33: -0.0151 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 6 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.9830 -18.5485 9.2982 REMARK 3 T TENSOR REMARK 3 T11: 0.5873 T22: 0.6316 REMARK 3 T33: 0.5546 T12: -0.0984 REMARK 3 T13: -0.1792 T23: -0.0266 REMARK 3 L TENSOR REMARK 3 L11: 0.2299 L22: 0.0869 REMARK 3 L33: 0.2208 L12: -0.1664 REMARK 3 L13: 0.0140 L23: 0.0350 REMARK 3 S TENSOR REMARK 3 S11: -0.2540 S12: 0.7692 S13: 0.2134 REMARK 3 S21: -0.4431 S22: 0.0888 S23: 0.1980 REMARK 3 S31: -0.2610 S32: -0.5074 S33: -0.0001 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 11 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.2799 -37.3851 11.5114 REMARK 3 T TENSOR REMARK 3 T11: 0.8808 T22: 0.4035 REMARK 3 T33: 0.6630 T12: -0.2007 REMARK 3 T13: 0.1086 T23: -0.1511 REMARK 3 L TENSOR REMARK 3 L11: 7.1786 L22: 4.1829 REMARK 3 L33: 3.6355 L12: 3.0344 REMARK 3 L13: -3.1566 L23: -3.8389 REMARK 3 S TENSOR REMARK 3 S11: 0.5921 S12: 0.0092 S13: -2.4176 REMARK 3 S21: -1.0287 S22: -1.1184 S23: -1.1319 REMARK 3 S31: 1.5047 S32: 0.9918 S33: -0.0544 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 16 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.5760 -44.2115 18.7979 REMARK 3 T TENSOR REMARK 3 T11: 1.2062 T22: 0.7536 REMARK 3 T33: 0.5546 T12: -0.2337 REMARK 3 T13: 0.1891 T23: -0.0297 REMARK 3 L TENSOR REMARK 3 L11: 0.0043 L22: 0.1215 REMARK 3 L33: 0.4056 L12: 0.0402 REMARK 3 L13: 0.0259 L23: 0.1837 REMARK 3 S TENSOR REMARK 3 S11: 0.2287 S12: -1.5774 S13: 0.4180 REMARK 3 S21: -0.6223 S22: 1.0726 S23: 0.0709 REMARK 3 S31: 0.0999 S32: -0.2680 S33: -0.0093 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 5 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.4591 -38.1274 12.1054 REMARK 3 T TENSOR REMARK 3 T11: 0.8892 T22: 0.4825 REMARK 3 T33: 0.6001 T12: -0.3593 REMARK 3 T13: -0.1425 T23: 0.0377 REMARK 3 L TENSOR REMARK 3 L11: 0.5832 L22: 0.4710 REMARK 3 L33: 0.3489 L12: -0.1126 REMARK 3 L13: -0.1805 L23: 0.4302 REMARK 3 S TENSOR REMARK 3 S11: -0.3245 S12: -0.5271 S13: -0.4945 REMARK 3 S21: -1.5728 S22: 0.3835 S23: 0.5583 REMARK 3 S31: 0.6294 S32: -1.0748 S33: 0.0351 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 6 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.3984 -24.9508 11.1206 REMARK 3 T TENSOR REMARK 3 T11: 0.4593 T22: 0.4224 REMARK 3 T33: 0.3507 T12: -0.1730 REMARK 3 T13: 0.0879 T23: -0.0063 REMARK 3 L TENSOR REMARK 3 L11: 0.2385 L22: 0.2153 REMARK 3 L33: 0.2819 L12: -0.0980 REMARK 3 L13: -0.0494 L23: 0.2469 REMARK 3 S TENSOR REMARK 3 S11: -0.4506 S12: 0.0617 S13: -0.0755 REMARK 3 S21: -0.7575 S22: 0.0238 S23: -0.9190 REMARK 3 S31: 0.0831 S32: 0.2814 S33: -0.0010 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 11 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6421 -5.7064 10.2043 REMARK 3 T TENSOR REMARK 3 T11: 1.1644 T22: 0.5110 REMARK 3 T33: 0.7447 T12: -0.1465 REMARK 3 T13: -0.0596 T23: 0.1560 REMARK 3 L TENSOR REMARK 3 L11: 0.7125 L22: 0.1574 REMARK 3 L33: 0.3455 L12: -0.1045 REMARK 3 L13: 0.4031 L23: 0.1646 REMARK 3 S TENSOR REMARK 3 S11: 0.1647 S12: -0.2296 S13: 1.3593 REMARK 3 S21: -1.5164 S22: -0.2342 S23: 0.1622 REMARK 3 S31: -1.1125 S32: -0.7042 S33: -0.0018 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7YZD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1292121192. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUL-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9559 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.130 REMARK 200 RESOLUTION RANGE LOW (A) : 46.063 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 63.7 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.14 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 14.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 7YZ7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG SMEAR HIGH (MIX OF PEG 6000, REMARK 280 PEG 8000, PEG 10000), 0.2 M LITHIUM SULFATE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.40450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.40450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 18.12050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.37450 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 18.12050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.37450 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 75.40450 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 18.12050 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 48.37450 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 75.40450 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 18.12050 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 48.37450 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 86 REMARK 465 GLY A 87 REMARK 465 LYS A 88 REMARK 465 LYS A 89 REMARK 465 LYS A 90 REMARK 465 ASN A 91 REMARK 465 GLN A 194 REMARK 465 ASP A 195 REMARK 465 GLU A 196 REMARK 465 THR A 197 REMARK 465 ILE A 198 REMARK 465 GLN A 209 REMARK 465 GLY A 210 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC B 11 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL DBREF 7YZD A 86 210 UNP Q9I9E1 FOXH1_DANRE 86 210 DBREF 7YZD B 1 16 PDB 7YZD 7YZD 1 16 DBREF 7YZD C 1 16 PDB 7YZD 7YZD 1 16 SEQRES 1 A 125 GLY GLY LYS LYS LYS ASN TYR GLN ARG TYR PRO LYS PRO SEQRES 2 A 125 PRO TYR SER TYR LEU ALA MET ILE ALA MET VAL ILE GLN SEQRES 3 A 125 ASN SER PRO GLU LYS LYS LEU THR LEU SER GLU ILE LEU SEQRES 4 A 125 LYS GLU ILE SER THR LEU PHE PRO PHE PHE LYS GLY ASN SEQRES 5 A 125 TYR LYS GLY TRP ARG ASP SER VAL ARG HIS ASN LEU SER SEQRES 6 A 125 SER TYR ASP CYS PHE VAL LYS VAL LEU LYS ASP PRO GLY SEQRES 7 A 125 LYS PRO GLN GLY LYS GLY ASN PHE TRP THR VAL GLU VAL SEQRES 8 A 125 ASN ARG ILE PRO LEU GLU LEU LEU LYS ARG GLN ASN THR SEQRES 9 A 125 ALA VAL SER ARG GLN ASP GLU THR ILE PHE ALA GLN ASP SEQRES 10 A 125 LEU ALA PRO TYR ILE PHE GLN GLY SEQRES 1 B 16 DA DG DA DT DT DG DT DT DT DA DC DT DG SEQRES 2 B 16 DA DG DA SEQRES 1 C 16 DT DC DT DC DA DG DT DA DA DA DC DA DA SEQRES 2 C 16 DT DC DT HET ACT A 301 4 HET PGE A 302 10 HETNAM ACT ACETATE ION HETNAM PGE TRIETHYLENE GLYCOL FORMUL 4 ACT C2 H3 O2 1- FORMUL 5 PGE C6 H14 O4 FORMUL 6 HOH *29(H2 O) HELIX 1 AA1 SER A 101 SER A 113 1 13 HELIX 2 AA2 THR A 119 PHE A 131 1 13 HELIX 3 AA3 PRO A 132 GLY A 136 5 5 HELIX 4 AA4 GLY A 140 TYR A 152 1 13 HELIX 5 AA5 VAL A 176 ILE A 179 5 4 HELIX 6 AA6 PRO A 180 LYS A 185 5 6 HELIX 7 AA7 LEU A 203 ILE A 207 5 5 SHEET 1 AA1 2 PHE A 155 VAL A 158 0 SHEET 2 AA1 2 PHE A 171 VAL A 174 -1 O PHE A 171 N VAL A 158 CRYST1 36.241 96.749 150.809 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027593 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010336 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006631 0.00000