HEADER TRANSCRIPTION 23-FEB-22 7Z0U TITLE CRYSTAL STRUCTURE OF ATWRKY18 DNA-BINDING DOMAIN IN COMPLEX WITH W-BOX TITLE 2 DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: WRKY TRANSCRIPTION FACTOR 18; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: WRKY DNA-BINDING PROTEIN 18,ATWRKY18; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: COMPND 7 MDGSSFLDISLDLNTNPFSAKLPKKEVSVLASTHLKRKWLEQDESASELREELNRVNSENKKLTEMLAR COMPND 8 VCESYNELHNHLEKLQSRQSPEIEQTDIPIKKRKQDPDEFLGFPIGLSSGKTENSSSNEDHHHHHQQHE COMPND 9 QKNQLLSCKRPVTDSFNKAKVSTVYVPTETSDTSLTVKDGFQWRKYGQKVTRDNPSPRAYFRCSFAPSC COMPND 10 PVKKKVQRSAEDPSLLVATYEGTHNHLGPNASEGDATSQGGSSTVTLDLVNGCHRLALEKNERDNTMQE COMPND 11 VLIQQMASSLTKDSKFTAALAAAISGRLMEQSRT; COMPND 12 MOL_ID: 2; COMPND 13 MOLECULE: DNA (5'-D(*CP*GP*CP*CP*TP*TP*GP*AP*CP*CP*AP*GP*CP*GP*C)- COMPND 14 3'); COMPND 15 CHAIN: B; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 3; COMPND 18 MOLECULE: DNA (5'-D(*GP*CP*GP*CP*TP*GP*GP*TP*CP*AP*AP*GP*GP*CP*G)- COMPND 19 3'); COMPND 20 CHAIN: C; COMPND 21 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: WRKY18, AT4G31800, F28M20.10; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 15 ORGANISM_TAXID: 32630 KEYWDS TRANSCRIPTION FACTOR, DNA-BINDING DOMAIN, ZINC BINDING, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR M.GRZECHOWIAK,M.JASKOLSKI,M.RUSZKOWSKI REVDAT 3 31-JAN-24 7Z0U 1 REMARK REVDAT 2 06-JUL-22 7Z0U 1 REMARK REVDAT 1 22-JUN-22 7Z0U 0 JRNL AUTH M.GRZECHOWIAK,A.RUSZKOWSKA,J.SLIWIAK,A.URBANOWICZ, JRNL AUTH 2 M.JASKOLSKI,M.RUSZKOWSKI JRNL TITL NEW ASPECTS OF DNA RECOGNITION BY GROUP II WRKY JRNL TITL 2 TRANSCRIPTION FACTOR REVEALED BY STRUCTURAL AND FUNCTIONAL JRNL TITL 3 STUDY OF ATWRKY18 DNA BINDING DOMAIN. JRNL REF INT.J.BIOL.MACROMOL. V. 213 589 2022 JRNL REFN ISSN 0141-8130 JRNL PMID 35660042 JRNL DOI 10.1016/J.IJBIOMAC.2022.05.186 REMARK 2 REMARK 2 RESOLUTION. 2.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.88 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 7693 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.253 REMARK 3 R VALUE (WORKING SET) : 0.251 REMARK 3 FREE R VALUE : 0.300 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 385 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.8800 - 4.1200 1.00 2588 136 0.1953 0.2443 REMARK 3 2 4.1100 - 3.2700 0.92 2286 121 0.3246 0.3661 REMARK 3 3 3.2700 - 2.8500 0.99 2434 128 0.3829 0.4642 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.542 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.878 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 91.78 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 85.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 630 REMARK 3 ANGLE : 0.836 856 REMARK 3 CHIRALITY : 0.051 211 REMARK 3 PLANARITY : 0.008 141 REMARK 3 DIHEDRAL : 27.759 525 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 158 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.5287 48.4878 33.7283 REMARK 3 T TENSOR REMARK 3 T11: 0.4578 T22: 0.3911 REMARK 3 T33: 0.9706 T12: 0.1091 REMARK 3 T13: -0.2363 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 4.2669 L22: 5.0107 REMARK 3 L33: 4.3481 L12: 2.9101 REMARK 3 L13: -3.4407 L23: -2.3392 REMARK 3 S TENSOR REMARK 3 S11: 0.5901 S12: 0.7730 S13: 0.3329 REMARK 3 S21: 0.1347 S22: -0.2066 S23: -0.7863 REMARK 3 S31: -0.2826 S32: 0.1643 S33: -0.2269 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 166 THROUGH 180 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.5674 53.0453 33.9990 REMARK 3 T TENSOR REMARK 3 T11: 0.4577 T22: 0.4545 REMARK 3 T33: 1.0010 T12: 0.1041 REMARK 3 T13: -0.1827 T23: -0.0577 REMARK 3 L TENSOR REMARK 3 L11: 0.8875 L22: 3.9322 REMARK 3 L33: 3.0012 L12: 1.6411 REMARK 3 L13: 1.6228 L23: 2.8596 REMARK 3 S TENSOR REMARK 3 S11: -0.1065 S12: -0.5173 S13: 0.9719 REMARK 3 S21: 0.0079 S22: -0.7628 S23: 0.6161 REMARK 3 S31: 0.0244 S32: -0.2923 S33: 0.6783 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 181 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.6045 55.6997 22.1655 REMARK 3 T TENSOR REMARK 3 T11: 0.3772 T22: 0.1985 REMARK 3 T33: 1.0855 T12: 0.2254 REMARK 3 T13: -0.1214 T23: -0.0465 REMARK 3 L TENSOR REMARK 3 L11: 1.0513 L22: 0.4532 REMARK 3 L33: 2.0717 L12: -0.6878 REMARK 3 L13: -0.4728 L23: 0.4082 REMARK 3 S TENSOR REMARK 3 S11: 0.2693 S12: -0.0022 S13: 0.3573 REMARK 3 S21: -0.0855 S22: 0.1649 S23: -0.5350 REMARK 3 S31: -0.3871 S32: -0.0485 S33: 0.3862 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 189 THROUGH 194 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.6483 39.5130 20.6129 REMARK 3 T TENSOR REMARK 3 T11: 0.5917 T22: 0.6086 REMARK 3 T33: 1.1214 T12: -0.1480 REMARK 3 T13: 0.1395 T23: 0.0186 REMARK 3 L TENSOR REMARK 3 L11: 8.0170 L22: 8.7454 REMARK 3 L33: 9.2742 L12: -0.0545 REMARK 3 L13: 7.6810 L23: 3.1837 REMARK 3 S TENSOR REMARK 3 S11: 0.1990 S12: 1.9026 S13: 0.1292 REMARK 3 S21: -0.3456 S22: 0.9667 S23: -2.1444 REMARK 3 S31: -0.0526 S32: 1.1811 S33: -1.1491 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 195 THROUGH 209 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.2692 59.6847 24.5304 REMARK 3 T TENSOR REMARK 3 T11: 0.4058 T22: 0.2475 REMARK 3 T33: 1.0219 T12: 0.1324 REMARK 3 T13: 0.0382 T23: -0.0202 REMARK 3 L TENSOR REMARK 3 L11: 3.0851 L22: 2.7425 REMARK 3 L33: 8.0000 L12: -2.8683 REMARK 3 L13: -0.7844 L23: 1.5045 REMARK 3 S TENSOR REMARK 3 S11: 0.2970 S12: 0.4397 S13: 0.2479 REMARK 3 S21: -0.4141 S22: 0.3823 S23: -0.9789 REMARK 3 S31: -1.3013 S32: 0.1931 S33: -0.5243 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 210 THROUGH 228 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1140 46.7057 29.7945 REMARK 3 T TENSOR REMARK 3 T11: 0.2028 T22: 0.1819 REMARK 3 T33: 1.2205 T12: 0.2417 REMARK 3 T13: -0.3223 T23: -0.0429 REMARK 3 L TENSOR REMARK 3 L11: 0.9536 L22: 0.6899 REMARK 3 L33: 0.5596 L12: -0.4590 REMARK 3 L13: 0.0419 L23: -0.2146 REMARK 3 S TENSOR REMARK 3 S11: 0.1322 S12: 0.1068 S13: 0.0798 REMARK 3 S21: -0.0497 S22: -0.1141 S23: -0.1981 REMARK 3 S31: 0.1533 S32: 0.0969 S33: 0.0983 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 229 THROUGH 235 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.1246 64.7463 32.2743 REMARK 3 T TENSOR REMARK 3 T11: 0.7837 T22: 0.7104 REMARK 3 T33: 1.5365 T12: -0.2299 REMARK 3 T13: -0.4512 T23: -0.0978 REMARK 3 L TENSOR REMARK 3 L11: 5.7387 L22: 4.8695 REMARK 3 L33: 3.3575 L12: 2.5805 REMARK 3 L13: -3.4589 L23: -3.7283 REMARK 3 S TENSOR REMARK 3 S11: -0.3318 S12: 0.3675 S13: 1.6309 REMARK 3 S21: 0.3094 S22: 0.6097 S23: 0.2569 REMARK 3 S31: -1.2260 S32: 0.9691 S33: -0.0345 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0771 53.7666 12.5009 REMARK 3 T TENSOR REMARK 3 T11: 0.5949 T22: 0.6458 REMARK 3 T33: 1.4145 T12: 0.1035 REMARK 3 T13: 0.1394 T23: -0.2057 REMARK 3 L TENSOR REMARK 3 L11: 2.8197 L22: 3.1138 REMARK 3 L33: 2.2096 L12: -2.7366 REMARK 3 L13: 0.9621 L23: -1.8660 REMARK 3 S TENSOR REMARK 3 S11: -0.0126 S12: 0.8198 S13: 0.6624 REMARK 3 S21: -0.8922 S22: 0.4424 S23: -1.1993 REMARK 3 S31: 0.1807 S32: 0.5905 S33: -0.4169 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.9367 53.6465 11.2527 REMARK 3 T TENSOR REMARK 3 T11: 0.5632 T22: 0.6776 REMARK 3 T33: 1.1343 T12: 0.2284 REMARK 3 T13: 0.0736 T23: -0.1751 REMARK 3 L TENSOR REMARK 3 L11: 5.4524 L22: 7.2509 REMARK 3 L33: 4.3429 L12: -2.8375 REMARK 3 L13: -1.2671 L23: 1.6661 REMARK 3 S TENSOR REMARK 3 S11: 0.3919 S12: 2.0039 S13: 0.0136 REMARK 3 S21: -1.3253 S22: -0.5376 S23: -0.6642 REMARK 3 S31: -0.4046 S32: -0.3563 S33: -0.1140 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7Z0U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1292117552. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7918 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.850 REMARK 200 RESOLUTION RANGE LOW (A) : 39.880 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 23.90 REMARK 200 R MERGE (I) : 0.13600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.0300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 69.1 REMARK 200 DATA REDUNDANCY IN SHELL : 25.70 REMARK 200 R MERGE FOR SHELL (I) : 2.24200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7Z0R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.03 M SODIUM NITRATE, 0.03 M SODIUM REMARK 280 PHOSPHATE, 0.03 M AMMONIUM SULFATE, 0.1 M BUFFER SYSTEM 1 REMARK 280 (IMIDAZOLE; MES MONOHYDRATE (ACID) ) PH 6.5, 20% V/V PEG 500* REMARK 280 MME AND 10 % W/V PEG 20000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 56.39400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 56.39400 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.83200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 56.39400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 25.41600 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 56.39400 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 76.24800 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 56.39400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 76.24800 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 56.39400 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 25.41600 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 56.39400 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 56.39400 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 50.83200 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 56.39400 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 56.39400 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 50.83200 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 56.39400 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 76.24800 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 56.39400 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 25.41600 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 56.39400 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 25.41600 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 56.39400 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 76.24800 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 56.39400 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 56.39400 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 50.83200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2700 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 157 REMARK 465 PRO A 236 REMARK 465 ASN A 237 REMARK 465 ALA A 238 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 159 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA C 10 C3' - C2' - C1' ANGL. DEV. = -6.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 177 25.38 -146.26 REMARK 500 ARG A 190 1.90 -64.63 REMARK 500 HIS A 233 -156.88 -151.56 REMARK 500 LEU A 234 -41.46 -142.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 201 SG REMARK 620 2 CYS A 207 SG 120.3 REMARK 620 3 HIS A 231 ND1 106.3 98.7 REMARK 620 4 HIS A 233 NE2 118.4 105.8 104.3 REMARK 620 N 1 2 3 DBREF 7Z0U A 159 238 UNP Q9C5T4 WRK18_ARATH 159 238 DBREF 7Z0U B 1 15 PDB 7Z0U 7Z0U 1 15 DBREF 7Z0U C 1 15 PDB 7Z0U 7Z0U 1 15 SEQADV 7Z0U SER A 157 UNP Q9C5T4 EXPRESSION TAG SEQADV 7Z0U ASN A 158 UNP Q9C5T4 EXPRESSION TAG SEQRES 1 A 82 SER ASN VAL SER THR VAL TYR VAL PRO THR GLU THR SER SEQRES 2 A 82 ASP THR SER LEU THR VAL LYS ASP GLY PHE GLN TRP ARG SEQRES 3 A 82 LYS TYR GLY GLN LYS VAL THR ARG ASP ASN PRO SER PRO SEQRES 4 A 82 ARG ALA TYR PHE ARG CYS SER PHE ALA PRO SER CYS PRO SEQRES 5 A 82 VAL LYS LYS LYS VAL GLN ARG SER ALA GLU ASP PRO SER SEQRES 6 A 82 LEU LEU VAL ALA THR TYR GLU GLY THR HIS ASN HIS LEU SEQRES 7 A 82 GLY PRO ASN ALA SEQRES 1 B 15 DC DG DC DC DT DT DG DA DC DC DA DG DC SEQRES 2 B 15 DG DC SEQRES 1 C 15 DG DC DG DC DT DG DG DT DC DA DA DG DG SEQRES 2 C 15 DC DG HET ZN A 401 1 HETNAM ZN ZINC ION FORMUL 4 ZN ZN 2+ FORMUL 5 HOH *8(H2 O) SHEET 1 AA1 5 THR A 161 PRO A 165 0 SHEET 2 AA1 5 LEU A 222 GLU A 228 -1 O ALA A 225 N VAL A 162 SHEET 3 AA1 5 LYS A 210 ARG A 215 -1 N GLN A 214 O VAL A 224 SHEET 4 AA1 5 ASN A 192 CYS A 201 -1 N ALA A 197 O VAL A 213 SHEET 5 AA1 5 TRP A 181 THR A 189 -1 N TYR A 184 O TYR A 198 LINK SG CYS A 201 ZN ZN A 401 1555 1555 2.28 LINK SG CYS A 207 ZN ZN A 401 1555 1555 2.26 LINK ND1 HIS A 231 ZN ZN A 401 1555 1555 2.07 LINK NE2 HIS A 233 ZN ZN A 401 1555 1555 2.10 CISPEP 1 ALA A 204 PRO A 205 0 1.51 CRYST1 112.788 112.788 101.664 90.00 90.00 90.00 I 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008866 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008866 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009836 0.00000