HEADER HYDROLASE 08-MAR-22 7Z58 TITLE CRYSTAL STRUCTURE OF HUMAN CATHEPSIN L IN COMPLEX WITH COVALENTLY TITLE 2 BOUND CALPEPTIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATHEPSIN L; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CTSL, CTSL1; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PHAFFII GS115; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 644223 KEYWDS CATHEPSIN, CYSTEIN PROTEASE, DRUG DEVELOPMENT, DRUG TARGET, PEPTIDE- KEYWDS 2 LIKE INHIBITOR, LYSOSOME, PROTEIN DEGRADATION, SARS-COV-2, COVID-19, KEYWDS 3 SPIKE PROTEIN MATURATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.Y.A.REINKE,S.FALKE,J.LIESKE,W.EWERT,J.LOBODA,A.RAHMANI MASHHOUR, AUTHOR 2 M.HAUSER,K.KARNICAR,A.USENIK,N.LINDIC,M.LACH,H.BOEHLER,T.BECK,R.COX, AUTHOR 3 H.N.CHAPMAN,W.HINRICHS,D.TURK,S.GUENTHER,A.MEENTS REVDAT 3 07-FEB-24 7Z58 1 REMARK REVDAT 2 01-NOV-23 7Z58 1 JRNL REVDAT 1 22-MAR-23 7Z58 0 JRNL AUTH P.Y.A.REINKE,E.E.DE SOUZA,S.GUNTHER,S.FALKE,J.LIESKE, JRNL AUTH 2 W.EWERT,J.LOBODA,A.HERRMANN,A.RAHMANI MASHHOUR,K.KARNICAR, JRNL AUTH 3 A.USENIK,N.LINDIC,A.SEKIRNIK,V.F.BOTOSSO,G.M.M.SANTELLI, JRNL AUTH 4 J.KAPRONEZAI,M.V.DE ARAUJO,T.T.SILVA-PEREIRA,A.F.S.FILHO, JRNL AUTH 5 M.S.TAVARES,L.FLOREZ-ALVAREZ,D.B.L.DE OLIVEIRA,E.L.DURIGON, JRNL AUTH 6 P.R.GIARETTA,M.B.HEINEMANN,M.HAUSER,B.SEYCHELL,H.BOHLER, JRNL AUTH 7 W.RUT,M.DRAG,T.BECK,R.COX,H.N.CHAPMAN,C.BETZEL,W.BREHM, JRNL AUTH 8 W.HINRICHS,G.EBERT,S.L.LATHAM,A.M.S.GUIMARAES,D.TURK, JRNL AUTH 9 C.WRENGER,A.MEENTS JRNL TITL CALPEPTIN IS A POTENT CATHEPSIN INHIBITOR AND DRUG CANDIDATE JRNL TITL 2 FOR SARS-COV-2 INFECTIONS. JRNL REF COMMUN BIOL V. 6 1058 2023 JRNL REFN ESSN 2399-3642 JRNL PMID 37853179 JRNL DOI 10.1038/S42003-023-05317-9 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.D.ADAMS,P.V.AFONINE,G.BUNKOCZI,V.B.CHEN,I.W.DAVIS, REMARK 1 AUTH 2 N.ECHOLS,J.J.HEADD,L.W.HUNG,G.J.KAPRAL,R.W.GROSSE-KUNSTLEVE, REMARK 1 AUTH 3 A.J.MCCOY,N.W.MORIARTY,R.OEFFNER,R.J.READ,D.C.RICHARDSON, REMARK 1 AUTH 4 J.S.RICHARDSON,T.C.TERWILLIGER,P.H.ZWART REMARK 1 TITL PHENIX: A COMPREHENSIVE PYTHON-BASED SYSTEM FOR REMARK 1 TITL 2 MACROMOLECULAR STRUCTURE SOLUTION. REMARK 1 REF ACTA CRYSTALLOGR D BIOL V. 66 213 2010 REMARK 1 REF 2 CRYSTALLOGR REMARK 1 REFN ESSN 1399-0047 REMARK 1 DOI 10.1107/S0907444909052925 REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18-3855_9999 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 175666 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.130 REMARK 3 R VALUE (WORKING SET) : 0.130 REMARK 3 FREE R VALUE : 0.158 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.140 REMARK 3 FREE R VALUE TEST SET COUNT : 2009 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.6400 - 3.2500 1.00 12393 146 0.1277 0.1572 REMARK 3 2 3.2500 - 2.5800 1.00 12408 137 0.1266 0.1426 REMARK 3 3 2.5800 - 2.2600 1.00 12428 150 0.1177 0.1484 REMARK 3 4 2.2600 - 2.0500 1.00 12384 142 0.1147 0.1489 REMARK 3 5 2.0500 - 1.9000 1.00 12436 146 0.1143 0.1451 REMARK 3 6 1.9000 - 1.7900 1.00 12327 132 0.1203 0.1537 REMARK 3 7 1.7900 - 1.7000 1.00 12460 152 0.1211 0.1542 REMARK 3 8 1.7000 - 1.6300 1.00 12406 141 0.1240 0.1412 REMARK 3 9 1.6300 - 1.5600 1.00 12388 144 0.1302 0.1555 REMARK 3 10 1.5600 - 1.5100 1.00 12402 136 0.1402 0.1735 REMARK 3 11 1.5100 - 1.4600 1.00 12367 151 0.1545 0.1867 REMARK 3 12 1.4600 - 1.4200 1.00 12410 147 0.1800 0.2205 REMARK 3 13 1.4200 - 1.3800 1.00 12433 123 0.1966 0.1959 REMARK 3 14 1.3800 - 1.3500 1.00 12415 162 0.2361 0.2602 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.115 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.920 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.36 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 7584 REMARK 3 ANGLE : 1.086 10240 REMARK 3 CHIRALITY : 0.087 991 REMARK 3 PLANARITY : 0.008 1406 REMARK 3 DIHEDRAL : 6.729 1199 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 21 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.7534 -17.1959 -10.1414 REMARK 3 T TENSOR REMARK 3 T11: 0.1217 T22: 0.1238 REMARK 3 T33: 0.1164 T12: -0.0217 REMARK 3 T13: 0.0471 T23: -0.0445 REMARK 3 L TENSOR REMARK 3 L11: 1.6097 L22: 1.6896 REMARK 3 L33: 1.3442 L12: 0.9402 REMARK 3 L13: 0.9874 L23: 0.7856 REMARK 3 S TENSOR REMARK 3 S11: 0.0055 S12: 0.0691 S13: -0.1108 REMARK 3 S21: -0.0622 S22: 0.0893 S23: -0.1479 REMARK 3 S31: 0.0036 S32: 0.0389 S33: -0.0664 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 81 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.7418 -14.4896 -0.2718 REMARK 3 T TENSOR REMARK 3 T11: 0.1243 T22: 0.1287 REMARK 3 T33: 0.1347 T12: -0.0235 REMARK 3 T13: 0.0320 T23: -0.0150 REMARK 3 L TENSOR REMARK 3 L11: 0.9122 L22: 1.0533 REMARK 3 L33: 1.9225 L12: 0.7617 REMARK 3 L13: 1.1757 L23: 1.2081 REMARK 3 S TENSOR REMARK 3 S11: 0.0806 S12: -0.0556 S13: -0.1285 REMARK 3 S21: 0.0287 S22: -0.0115 S23: -0.1194 REMARK 3 S31: 0.1239 S32: -0.1830 S33: -0.0466 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.4787 -3.2743 23.9841 REMARK 3 T TENSOR REMARK 3 T11: 0.0900 T22: 0.0603 REMARK 3 T33: 0.1082 T12: 0.0093 REMARK 3 T13: 0.0103 T23: -0.0076 REMARK 3 L TENSOR REMARK 3 L11: 1.5057 L22: 1.5326 REMARK 3 L33: 0.7259 L12: 0.5964 REMARK 3 L13: -0.1057 L23: -0.1336 REMARK 3 S TENSOR REMARK 3 S11: 0.0296 S12: -0.0485 S13: -0.1422 REMARK 3 S21: 0.0535 S22: -0.0024 S23: -0.1085 REMARK 3 S31: 0.0391 S32: 0.0245 S33: -0.0215 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 105 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.9415 1.9442 8.1749 REMARK 3 T TENSOR REMARK 3 T11: 0.0927 T22: 0.1191 REMARK 3 T33: 0.1023 T12: -0.0100 REMARK 3 T13: 0.0152 T23: -0.0186 REMARK 3 L TENSOR REMARK 3 L11: 1.4259 L22: 0.5395 REMARK 3 L33: 1.4588 L12: 0.0997 REMARK 3 L13: -0.8301 L23: 0.0653 REMARK 3 S TENSOR REMARK 3 S11: -0.0296 S12: 0.2980 S13: -0.0480 REMARK 3 S21: -0.0801 S22: 0.0544 S23: -0.0491 REMARK 3 S31: 0.0270 S32: -0.0598 S33: -0.0226 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 172 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.2346 14.4109 2.7721 REMARK 3 T TENSOR REMARK 3 T11: 0.2468 T22: 0.2658 REMARK 3 T33: 0.1989 T12: -0.0359 REMARK 3 T13: 0.0509 T23: 0.0708 REMARK 3 L TENSOR REMARK 3 L11: 2.8692 L22: 5.4921 REMARK 3 L33: 3.6027 L12: 1.6838 REMARK 3 L13: -1.0937 L23: -0.3430 REMARK 3 S TENSOR REMARK 3 S11: -0.0421 S12: 0.7501 S13: 0.4693 REMARK 3 S21: -0.6287 S22: 0.1120 S23: 0.0772 REMARK 3 S31: -0.5615 S32: 0.1120 S33: 0.0219 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 187 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.6298 2.7548 8.8371 REMARK 3 T TENSOR REMARK 3 T11: 0.1053 T22: 0.0918 REMARK 3 T33: 0.1079 T12: -0.0161 REMARK 3 T13: 0.0317 T23: -0.0232 REMARK 3 L TENSOR REMARK 3 L11: 1.9478 L22: 0.4858 REMARK 3 L33: 1.8650 L12: 0.0451 REMARK 3 L13: -0.5308 L23: -0.1317 REMARK 3 S TENSOR REMARK 3 S11: 0.0177 S12: 0.2718 S13: -0.0237 REMARK 3 S21: -0.0302 S22: 0.0162 S23: -0.0497 REMARK 3 S31: -0.0612 S32: 0.0649 S33: -0.0334 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 2 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.0948 6.4896 -10.9262 REMARK 3 T TENSOR REMARK 3 T11: 0.1437 T22: 0.1258 REMARK 3 T33: 0.0736 T12: -0.0407 REMARK 3 T13: 0.0621 T23: 0.0103 REMARK 3 L TENSOR REMARK 3 L11: 4.1198 L22: 3.7080 REMARK 3 L33: 3.0344 L12: 1.8672 REMARK 3 L13: 1.2167 L23: 0.6937 REMARK 3 S TENSOR REMARK 3 S11: 0.0588 S12: 0.0224 S13: -0.1500 REMARK 3 S21: 0.0532 S22: -0.0140 S23: 0.0272 REMARK 3 S31: 0.2467 S32: -0.2466 S33: -0.0340 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 25 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.6872 10.6429 -16.7234 REMARK 3 T TENSOR REMARK 3 T11: 0.1256 T22: 0.1000 REMARK 3 T33: 0.0792 T12: -0.0116 REMARK 3 T13: 0.0337 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 2.2986 L22: 2.1372 REMARK 3 L33: 1.8830 L12: 0.8972 REMARK 3 L13: 0.1186 L23: 0.3799 REMARK 3 S TENSOR REMARK 3 S11: -0.0690 S12: 0.1536 S13: -0.1305 REMARK 3 S21: -0.0856 S22: 0.0445 S23: -0.0858 REMARK 3 S31: 0.1230 S32: 0.0497 S33: 0.0272 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 61 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.8170 15.8959 -13.5451 REMARK 3 T TENSOR REMARK 3 T11: 0.0964 T22: 0.0964 REMARK 3 T33: 0.0943 T12: -0.0488 REMARK 3 T13: 0.0175 T23: 0.0041 REMARK 3 L TENSOR REMARK 3 L11: 4.3860 L22: 2.9129 REMARK 3 L33: 3.4349 L12: -0.4783 REMARK 3 L13: -0.1753 L23: -0.2902 REMARK 3 S TENSOR REMARK 3 S11: 0.0395 S12: -0.0476 S13: -0.0685 REMARK 3 S21: 0.0500 S22: -0.0407 S23: -0.1831 REMARK 3 S31: -0.0135 S32: 0.2913 S33: -0.0014 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 105 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.7773 16.1083 -23.5891 REMARK 3 T TENSOR REMARK 3 T11: 0.1451 T22: 0.1329 REMARK 3 T33: 0.0758 T12: -0.0497 REMARK 3 T13: 0.0080 T23: 0.0081 REMARK 3 L TENSOR REMARK 3 L11: 2.9466 L22: 4.1229 REMARK 3 L33: 4.3565 L12: -0.3601 REMARK 3 L13: 2.3727 L23: -3.2882 REMARK 3 S TENSOR REMARK 3 S11: 0.1318 S12: 0.5571 S13: 0.4740 REMARK 3 S21: -0.2285 S22: -0.0468 S23: -0.0625 REMARK 3 S31: 0.0443 S32: -0.1891 S33: -0.0466 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 119 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.1747 12.4648 -22.5910 REMARK 3 T TENSOR REMARK 3 T11: 0.1956 T22: 0.3648 REMARK 3 T33: 0.1555 T12: -0.0482 REMARK 3 T13: 0.0091 T23: 0.0679 REMARK 3 L TENSOR REMARK 3 L11: 5.9529 L22: 4.3333 REMARK 3 L33: 3.9018 L12: -4.8531 REMARK 3 L13: -2.9826 L23: 3.3830 REMARK 3 S TENSOR REMARK 3 S11: 0.2287 S12: 0.7081 S13: 0.1063 REMARK 3 S21: -0.3741 S22: -0.1731 S23: 0.2540 REMARK 3 S31: -0.0735 S32: -0.8127 S33: -0.0546 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 130 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.0827 14.2109 -3.2636 REMARK 3 T TENSOR REMARK 3 T11: 0.1652 T22: 0.1986 REMARK 3 T33: 0.1518 T12: -0.0283 REMARK 3 T13: 0.0475 T23: 0.0049 REMARK 3 L TENSOR REMARK 3 L11: 1.0632 L22: 0.2706 REMARK 3 L33: 2.9795 L12: 0.4040 REMARK 3 L13: -1.2234 L23: -0.8427 REMARK 3 S TENSOR REMARK 3 S11: 0.0559 S12: 0.0925 S13: 0.1310 REMARK 3 S21: 0.0995 S22: 0.0279 S23: 0.1305 REMARK 3 S31: -0.0048 S32: -0.4265 S33: -0.0654 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 155 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.8839 13.3023 -10.6874 REMARK 3 T TENSOR REMARK 3 T11: 0.1835 T22: 0.3037 REMARK 3 T33: 0.1263 T12: -0.0246 REMARK 3 T13: 0.0551 T23: 0.0595 REMARK 3 L TENSOR REMARK 3 L11: 5.5715 L22: 4.3057 REMARK 3 L33: 1.9604 L12: 0.4296 REMARK 3 L13: -0.5769 L23: 0.6461 REMARK 3 S TENSOR REMARK 3 S11: 0.0072 S12: 0.1791 S13: 0.1080 REMARK 3 S21: 0.0807 S22: 0.0235 S23: 0.4699 REMARK 3 S31: -0.0139 S32: -0.6132 S33: -0.0196 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 187 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.1909 12.9092 -9.7107 REMARK 3 T TENSOR REMARK 3 T11: 0.1506 T22: 0.1748 REMARK 3 T33: 0.1318 T12: -0.0398 REMARK 3 T13: 0.0377 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 2.8606 L22: 1.1426 REMARK 3 L33: 2.3985 L12: -0.1800 REMARK 3 L13: -0.5197 L23: -0.6256 REMARK 3 S TENSOR REMARK 3 S11: 0.0143 S12: 0.0295 S13: 0.0502 REMARK 3 S21: 0.0092 S22: 0.1056 S23: 0.1458 REMARK 3 S31: 0.0865 S32: -0.4749 S33: -0.0964 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.7563 12.6070 23.4862 REMARK 3 T TENSOR REMARK 3 T11: 0.0856 T22: 0.0401 REMARK 3 T33: 0.0604 T12: 0.0018 REMARK 3 T13: 0.0241 T23: -0.0400 REMARK 3 L TENSOR REMARK 3 L11: 2.2046 L22: 2.3686 REMARK 3 L33: 2.5631 L12: -0.4658 REMARK 3 L13: 0.4965 L23: -1.4889 REMARK 3 S TENSOR REMARK 3 S11: 0.0562 S12: -0.0259 S13: -0.0693 REMARK 3 S21: -0.0391 S22: -0.0011 S23: 0.1556 REMARK 3 S31: 0.0737 S32: -0.0237 S33: -0.0635 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 25 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3355 25.8902 28.2663 REMARK 3 T TENSOR REMARK 3 T11: 0.1046 T22: 0.0535 REMARK 3 T33: 0.1036 T12: 0.0055 REMARK 3 T13: 0.0257 T23: -0.0161 REMARK 3 L TENSOR REMARK 3 L11: 1.2286 L22: 2.5662 REMARK 3 L33: 0.8853 L12: 0.5848 REMARK 3 L13: 0.1731 L23: -0.2585 REMARK 3 S TENSOR REMARK 3 S11: 0.0071 S12: -0.0422 S13: 0.0985 REMARK 3 S21: 0.1062 S22: -0.0601 S23: 0.0313 REMARK 3 S31: -0.0384 S32: -0.0126 S33: 0.0505 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 81 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.6548 32.7298 23.3210 REMARK 3 T TENSOR REMARK 3 T11: 0.1292 T22: 0.0832 REMARK 3 T33: 0.2156 T12: 0.0106 REMARK 3 T13: 0.0248 T23: -0.0191 REMARK 3 L TENSOR REMARK 3 L11: 1.3472 L22: 2.9319 REMARK 3 L33: 5.3509 L12: -0.9816 REMARK 3 L13: -0.3564 L23: 1.0631 REMARK 3 S TENSOR REMARK 3 S11: 0.1284 S12: -0.0172 S13: 0.1864 REMARK 3 S21: -0.0572 S22: -0.0922 S23: 0.3319 REMARK 3 S31: -0.3281 S32: -0.1654 S33: -0.0591 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 105 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.4070 22.0219 35.3836 REMARK 3 T TENSOR REMARK 3 T11: 0.1751 T22: 0.0715 REMARK 3 T33: 0.1158 T12: -0.0295 REMARK 3 T13: 0.0222 T23: -0.0158 REMARK 3 L TENSOR REMARK 3 L11: 5.2957 L22: 5.0712 REMARK 3 L33: 1.2113 L12: -4.5314 REMARK 3 L13: 1.0401 L23: -0.3067 REMARK 3 S TENSOR REMARK 3 S11: -0.2894 S12: -0.2855 S13: 0.0934 REMARK 3 S21: 0.4560 S22: 0.2013 S23: -0.0735 REMARK 3 S31: -0.0089 S32: 0.0043 S33: 0.0688 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 119 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.6355 8.1179 35.2685 REMARK 3 T TENSOR REMARK 3 T11: 0.1268 T22: 0.0865 REMARK 3 T33: 0.0687 T12: 0.0098 REMARK 3 T13: -0.0006 T23: 0.0128 REMARK 3 L TENSOR REMARK 3 L11: 6.8560 L22: 6.0974 REMARK 3 L33: 8.0035 L12: -0.6507 REMARK 3 L13: -4.9809 L23: 2.2824 REMARK 3 S TENSOR REMARK 3 S11: -0.1778 S12: -0.4307 S13: -0.1616 REMARK 3 S21: 0.2970 S22: 0.1585 S23: -0.0827 REMARK 3 S31: 0.2750 S32: 0.2917 S33: -0.0039 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 130 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.6037 8.3589 18.8064 REMARK 3 T TENSOR REMARK 3 T11: 0.0832 T22: 0.0600 REMARK 3 T33: 0.0892 T12: -0.0012 REMARK 3 T13: 0.0219 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 1.2401 L22: 1.5533 REMARK 3 L33: 1.4942 L12: -0.2951 REMARK 3 L13: -0.2387 L23: 0.1427 REMARK 3 S TENSOR REMARK 3 S11: -0.0132 S12: 0.0465 S13: -0.0478 REMARK 3 S21: -0.0058 S22: -0.0130 S23: -0.0356 REMARK 3 S31: 0.0879 S32: 0.0373 S33: 0.0011 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 198 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.3568 11.3528 26.8335 REMARK 3 T TENSOR REMARK 3 T11: 0.0988 T22: 0.0491 REMARK 3 T33: 0.0710 T12: -0.0102 REMARK 3 T13: 0.0205 T23: 0.0081 REMARK 3 L TENSOR REMARK 3 L11: 2.0944 L22: 1.7781 REMARK 3 L33: 0.2447 L12: -1.0335 REMARK 3 L13: -0.1420 L23: 0.2695 REMARK 3 S TENSOR REMARK 3 S11: -0.0242 S12: -0.0697 S13: 0.0402 REMARK 3 S21: 0.1359 S22: 0.0452 S23: -0.0652 REMARK 3 S31: 0.0268 S32: 0.0402 S33: -0.0130 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7Z58 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-MAR-22. REMARK 100 THE DEPOSITION ID IS D_1292121461. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, DESY REMARK 200 BEAMLINE : P11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 175672 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.350 REMARK 200 RESOLUTION RANGE LOW (A) : 49.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 61.10 REMARK 200 R MERGE (I) : 0.25490 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.8300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 23.10 REMARK 200 R MERGE FOR SHELL (I) : 1.33500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.110 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 7QKC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MATURE CATHEPSIN L AT A CONCENTRATION REMARK 280 OF 7 MG/ML WAS EQUILIBRATED AGAINST 27% W/V PEG 8000, 1 MM TCEP REMARK 280 AND 0.1 M SODIUM ACETATE AT PH 4.0. CRYSTALS, WHICH GREW AT 293 REMARK 280 K TO FINAL SIZE AFTER APPROXIMATELY 3 DAYS, WERE TRANSFERRED TO REMARK 280 A COMPOUND SOAKING SOLUTION CONTAINING 22% W/V PEG 8000, 1 MM REMARK 280 TCEP AND 0.1 M SODIUM ACETATE AT PH 4.0 AS WELL AS 5% V/V DMSO REMARK 280 AND 10% V/V PEG 400., VAPOR DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA C 1 REMARK 465 THR C 175 REMARK 465 GLU C 176 REMARK 465 SER C 177 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 21 41.13 -101.52 REMARK 500 ARG A 205 67.44 -116.29 REMARK 500 ARG A 205 66.35 -116.29 REMARK 500 GLN B 21 53.92 -95.49 REMARK 500 LYS B 147 -48.46 -130.45 REMARK 500 ARG B 205 67.57 -119.44 REMARK 500 ALA B 214 57.26 -152.13 REMARK 500 ALA C 214 58.79 -149.66 REMARK 500 GLN D 21 66.53 -101.14 REMARK 500 SER D 174 -165.39 63.69 REMARK 500 SER D 174 -165.39 67.34 REMARK 500 ALA D 214 58.44 -148.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C 607 DISTANCE = 6.88 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7QKC RELATED DB: PDB REMARK 900 RELATED ID: 7QKD RELATED DB: PDB REMARK 900 RELATED ID: 7QKB RELATED DB: PDB REMARK 900 RELATED ID: 7QKA RELATED DB: PDB REMARK 900 RELATED ID: 7Z3T RELATED DB: PDB REMARK 900 RELATED ID: 7Z2K RELATED DB: PDB REMARK 900 RELATED ID: 7Z3U RELATED DB: PDB REMARK 900 RELATED ID: 7QGW RELATED DB: PDB DBREF 7Z58 A 1 220 UNP P07711 CATL1_HUMAN 114 333 DBREF 7Z58 B 1 220 UNP P07711 CATL1_HUMAN 114 333 DBREF 7Z58 C 1 220 UNP P07711 CATL1_HUMAN 114 333 DBREF 7Z58 D 1 220 UNP P07711 CATL1_HUMAN 114 333 SEQADV 7Z58 ALA A 110 UNP P07711 THR 223 ENGINEERED MUTATION SEQADV 7Z58 ALA B 110 UNP P07711 THR 223 ENGINEERED MUTATION SEQADV 7Z58 ALA C 110 UNP P07711 THR 223 ENGINEERED MUTATION SEQADV 7Z58 ALA D 110 UNP P07711 THR 223 ENGINEERED MUTATION SEQRES 1 A 220 ALA PRO ARG SER VAL ASP TRP ARG GLU LYS GLY TYR VAL SEQRES 2 A 220 THR PRO VAL LYS ASN GLN GLY GLN CYS GLY SER CYS TRP SEQRES 3 A 220 ALA PHE SER ALA THR GLY ALA LEU GLU GLY GLN MET PHE SEQRES 4 A 220 ARG LYS THR GLY ARG LEU ILE SER LEU SER GLU GLN ASN SEQRES 5 A 220 LEU VAL ASP CYS SER GLY PRO GLN GLY ASN GLU GLY CYS SEQRES 6 A 220 ASN GLY GLY LEU MET ASP TYR ALA PHE GLN TYR VAL GLN SEQRES 7 A 220 ASP ASN GLY GLY LEU ASP SER GLU GLU SER TYR PRO TYR SEQRES 8 A 220 GLU ALA THR GLU GLU SER CYS LYS TYR ASN PRO LYS TYR SEQRES 9 A 220 SER VAL ALA ASN ASP ALA GLY PHE VAL ASP ILE PRO LYS SEQRES 10 A 220 GLN GLU LYS ALA LEU MET LYS ALA VAL ALA THR VAL GLY SEQRES 11 A 220 PRO ILE SER VAL ALA ILE ASP ALA GLY HIS GLU SER PHE SEQRES 12 A 220 LEU PHE TYR LYS GLU GLY ILE TYR PHE GLU PRO ASP CYS SEQRES 13 A 220 SER SER GLU ASP MET ASP HIS GLY VAL LEU VAL VAL GLY SEQRES 14 A 220 TYR GLY PHE GLU SER THR GLU SER ASP ASN ASN LYS TYR SEQRES 15 A 220 TRP LEU VAL LYS ASN SER TRP GLY GLU GLU TRP GLY MET SEQRES 16 A 220 GLY GLY TYR VAL LYS MET ALA LYS ASP ARG ARG ASN HIS SEQRES 17 A 220 CYS GLY ILE ALA SER ALA ALA SER TYR PRO THR VAL SEQRES 1 B 220 ALA PRO ARG SER VAL ASP TRP ARG GLU LYS GLY TYR VAL SEQRES 2 B 220 THR PRO VAL LYS ASN GLN GLY GLN CYS GLY SER CYS TRP SEQRES 3 B 220 ALA PHE SER ALA THR GLY ALA LEU GLU GLY GLN MET PHE SEQRES 4 B 220 ARG LYS THR GLY ARG LEU ILE SER LEU SER GLU GLN ASN SEQRES 5 B 220 LEU VAL ASP CYS SER GLY PRO GLN GLY ASN GLU GLY CYS SEQRES 6 B 220 ASN GLY GLY LEU MET ASP TYR ALA PHE GLN TYR VAL GLN SEQRES 7 B 220 ASP ASN GLY GLY LEU ASP SER GLU GLU SER TYR PRO TYR SEQRES 8 B 220 GLU ALA THR GLU GLU SER CYS LYS TYR ASN PRO LYS TYR SEQRES 9 B 220 SER VAL ALA ASN ASP ALA GLY PHE VAL ASP ILE PRO LYS SEQRES 10 B 220 GLN GLU LYS ALA LEU MET LYS ALA VAL ALA THR VAL GLY SEQRES 11 B 220 PRO ILE SER VAL ALA ILE ASP ALA GLY HIS GLU SER PHE SEQRES 12 B 220 LEU PHE TYR LYS GLU GLY ILE TYR PHE GLU PRO ASP CYS SEQRES 13 B 220 SER SER GLU ASP MET ASP HIS GLY VAL LEU VAL VAL GLY SEQRES 14 B 220 TYR GLY PHE GLU SER THR GLU SER ASP ASN ASN LYS TYR SEQRES 15 B 220 TRP LEU VAL LYS ASN SER TRP GLY GLU GLU TRP GLY MET SEQRES 16 B 220 GLY GLY TYR VAL LYS MET ALA LYS ASP ARG ARG ASN HIS SEQRES 17 B 220 CYS GLY ILE ALA SER ALA ALA SER TYR PRO THR VAL SEQRES 1 C 220 ALA PRO ARG SER VAL ASP TRP ARG GLU LYS GLY TYR VAL SEQRES 2 C 220 THR PRO VAL LYS ASN GLN GLY GLN CYS GLY SER CYS TRP SEQRES 3 C 220 ALA PHE SER ALA THR GLY ALA LEU GLU GLY GLN MET PHE SEQRES 4 C 220 ARG LYS THR GLY ARG LEU ILE SER LEU SER GLU GLN ASN SEQRES 5 C 220 LEU VAL ASP CYS SER GLY PRO GLN GLY ASN GLU GLY CYS SEQRES 6 C 220 ASN GLY GLY LEU MET ASP TYR ALA PHE GLN TYR VAL GLN SEQRES 7 C 220 ASP ASN GLY GLY LEU ASP SER GLU GLU SER TYR PRO TYR SEQRES 8 C 220 GLU ALA THR GLU GLU SER CYS LYS TYR ASN PRO LYS TYR SEQRES 9 C 220 SER VAL ALA ASN ASP ALA GLY PHE VAL ASP ILE PRO LYS SEQRES 10 C 220 GLN GLU LYS ALA LEU MET LYS ALA VAL ALA THR VAL GLY SEQRES 11 C 220 PRO ILE SER VAL ALA ILE ASP ALA GLY HIS GLU SER PHE SEQRES 12 C 220 LEU PHE TYR LYS GLU GLY ILE TYR PHE GLU PRO ASP CYS SEQRES 13 C 220 SER SER GLU ASP MET ASP HIS GLY VAL LEU VAL VAL GLY SEQRES 14 C 220 TYR GLY PHE GLU SER THR GLU SER ASP ASN ASN LYS TYR SEQRES 15 C 220 TRP LEU VAL LYS ASN SER TRP GLY GLU GLU TRP GLY MET SEQRES 16 C 220 GLY GLY TYR VAL LYS MET ALA LYS ASP ARG ARG ASN HIS SEQRES 17 C 220 CYS GLY ILE ALA SER ALA ALA SER TYR PRO THR VAL SEQRES 1 D 220 ALA PRO ARG SER VAL ASP TRP ARG GLU LYS GLY TYR VAL SEQRES 2 D 220 THR PRO VAL LYS ASN GLN GLY GLN CYS GLY SER CYS TRP SEQRES 3 D 220 ALA PHE SER ALA THR GLY ALA LEU GLU GLY GLN MET PHE SEQRES 4 D 220 ARG LYS THR GLY ARG LEU ILE SER LEU SER GLU GLN ASN SEQRES 5 D 220 LEU VAL ASP CYS SER GLY PRO GLN GLY ASN GLU GLY CYS SEQRES 6 D 220 ASN GLY GLY LEU MET ASP TYR ALA PHE GLN TYR VAL GLN SEQRES 7 D 220 ASP ASN GLY GLY LEU ASP SER GLU GLU SER TYR PRO TYR SEQRES 8 D 220 GLU ALA THR GLU GLU SER CYS LYS TYR ASN PRO LYS TYR SEQRES 9 D 220 SER VAL ALA ASN ASP ALA GLY PHE VAL ASP ILE PRO LYS SEQRES 10 D 220 GLN GLU LYS ALA LEU MET LYS ALA VAL ALA THR VAL GLY SEQRES 11 D 220 PRO ILE SER VAL ALA ILE ASP ALA GLY HIS GLU SER PHE SEQRES 12 D 220 LEU PHE TYR LYS GLU GLY ILE TYR PHE GLU PRO ASP CYS SEQRES 13 D 220 SER SER GLU ASP MET ASP HIS GLY VAL LEU VAL VAL GLY SEQRES 14 D 220 TYR GLY PHE GLU SER THR GLU SER ASP ASN ASN LYS TYR SEQRES 15 D 220 TRP LEU VAL LYS ASN SER TRP GLY GLU GLU TRP GLY MET SEQRES 16 D 220 GLY GLY TYR VAL LYS MET ALA LYS ASP ARG ARG ASN HIS SEQRES 17 D 220 CYS GLY ILE ALA SER ALA ALA SER TYR PRO THR VAL HET PEG A 301 17 HET PEG A 302 17 HET PGE A 303 24 HET PGE A 304 24 HET EDO A 305 10 HET RN2 A 306 57 HET DMS B 401 10 HET PEG B 402 17 HET PEG B 403 17 HET EDO B 404 10 HET RN2 B 405 57 HET PEG C 301 17 HET PEG C 302 17 HET PGE C 303 24 HET EDO C 304 10 HET RN2 C 305 57 HET DMS D 501 10 HET PEG D 502 17 HET PEG D 503 17 HET PGE D 504 24 HET PGE D 505 24 HET RN2 D 506 57 HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PGE TRIETHYLENE GLYCOL HETNAM EDO 1,2-ETHANEDIOL HETNAM RN2 CALPEPTIN HETNAM DMS DIMETHYL SULFOXIDE HETSYN EDO ETHYLENE GLYCOL FORMUL 5 PEG 8(C4 H10 O3) FORMUL 7 PGE 5(C6 H14 O4) FORMUL 9 EDO 3(C2 H6 O2) FORMUL 10 RN2 4(C20 H32 N2 O4) FORMUL 11 DMS 2(C2 H6 O S) FORMUL 27 HOH *965(H2 O) HELIX 1 AA1 ARG A 8 GLY A 11 5 4 HELIX 2 AA2 SER A 24 GLY A 43 1 20 HELIX 3 AA3 SER A 49 SER A 57 1 9 HELIX 4 AA4 GLY A 58 GLY A 61 5 4 HELIX 5 AA5 GLU A 63 GLY A 67 5 5 HELIX 6 AA6 LEU A 69 GLY A 81 1 13 HELIX 7 AA7 ASN A 101 LYS A 103 5 3 HELIX 8 AA8 GLN A 118 VAL A 129 1 12 HELIX 9 AA9 HIS A 140 PHE A 145 1 6 HELIX 10 AB1 ASN A 207 ILE A 211 5 5 HELIX 11 AB2 ARG B 8 GLY B 11 5 4 HELIX 12 AB3 SER B 24 GLY B 43 1 20 HELIX 13 AB4 SER B 49 SER B 57 1 9 HELIX 14 AB5 GLY B 58 GLY B 61 5 4 HELIX 15 AB6 GLU B 63 GLY B 67 5 5 HELIX 16 AB7 LEU B 69 GLY B 81 1 13 HELIX 17 AB8 ASN B 101 LYS B 103 5 3 HELIX 18 AB9 GLN B 118 VAL B 129 1 12 HELIX 19 AC1 HIS B 140 PHE B 145 1 6 HELIX 20 AC2 ASN B 207 ILE B 211 5 5 HELIX 21 AC3 ARG C 8 GLY C 11 5 4 HELIX 22 AC4 SER C 24 GLY C 43 1 20 HELIX 23 AC5 SER C 49 SER C 57 1 9 HELIX 24 AC6 GLY C 58 GLY C 61 5 4 HELIX 25 AC7 GLU C 63 GLY C 67 5 5 HELIX 26 AC8 LEU C 69 GLY C 81 1 13 HELIX 27 AC9 ASN C 101 LYS C 103 5 3 HELIX 28 AD1 GLN C 118 VAL C 129 1 12 HELIX 29 AD2 HIS C 140 PHE C 145 1 6 HELIX 30 AD3 ASN C 207 ILE C 211 5 5 HELIX 31 AD4 ARG D 8 GLY D 11 5 4 HELIX 32 AD5 SER D 24 GLY D 43 1 20 HELIX 33 AD6 SER D 49 SER D 57 1 9 HELIX 34 AD7 GLY D 58 GLY D 61 5 4 HELIX 35 AD8 GLU D 63 GLY D 67 5 5 HELIX 36 AD9 LEU D 69 GLY D 81 1 13 HELIX 37 AE1 ASN D 101 LYS D 103 5 3 HELIX 38 AE2 GLN D 118 VAL D 129 1 12 HELIX 39 AE3 HIS D 140 PHE D 145 1 6 HELIX 40 AE4 THR D 175 ASN D 179 5 5 HELIX 41 AE5 ASN D 207 ILE D 211 5 5 SHEET 1 AA1 3 VAL A 5 ASP A 6 0 SHEET 2 AA1 3 HIS A 163 PHE A 172 -1 O TYR A 170 N VAL A 5 SHEET 3 AA1 3 ILE A 132 ILE A 136 -1 N ILE A 132 O VAL A 167 SHEET 1 AA2 5 VAL A 5 ASP A 6 0 SHEET 2 AA2 5 HIS A 163 PHE A 172 -1 O TYR A 170 N VAL A 5 SHEET 3 AA2 5 LYS A 181 LYS A 186 -1 O LYS A 186 N LEU A 166 SHEET 4 AA2 5 TYR A 198 ALA A 202 -1 O MET A 201 N TRP A 183 SHEET 5 AA2 5 ILE A 150 TYR A 151 1 N TYR A 151 O LYS A 200 SHEET 1 AA3 2 LEU A 83 ASP A 84 0 SHEET 2 AA3 2 SER A 105 ALA A 107 -1 O VAL A 106 N LEU A 83 SHEET 1 AA4 2 PHE A 112 ASP A 114 0 SHEET 2 AA4 2 SER A 216 PRO A 218 -1 O TYR A 217 N VAL A 113 SHEET 1 AA5 3 VAL B 5 ASP B 6 0 SHEET 2 AA5 3 HIS B 163 GLY B 171 -1 O TYR B 170 N VAL B 5 SHEET 3 AA5 3 ILE B 132 ILE B 136 -1 N ILE B 132 O VAL B 167 SHEET 1 AA6 5 VAL B 5 ASP B 6 0 SHEET 2 AA6 5 HIS B 163 GLY B 171 -1 O TYR B 170 N VAL B 5 SHEET 3 AA6 5 TYR B 182 LYS B 186 -1 O LYS B 186 N LEU B 166 SHEET 4 AA6 5 TYR B 198 ALA B 202 -1 O MET B 201 N TRP B 183 SHEET 5 AA6 5 ILE B 150 TYR B 151 1 N TYR B 151 O LYS B 200 SHEET 1 AA7 2 LEU B 83 ASP B 84 0 SHEET 2 AA7 2 SER B 105 ALA B 107 -1 O VAL B 106 N LEU B 83 SHEET 1 AA8 2 PHE B 112 ASP B 114 0 SHEET 2 AA8 2 SER B 216 PRO B 218 -1 O TYR B 217 N VAL B 113 SHEET 1 AA9 3 VAL C 5 ASP C 6 0 SHEET 2 AA9 3 HIS C 163 GLY C 171 -1 O TYR C 170 N VAL C 5 SHEET 3 AA9 3 ILE C 132 ILE C 136 -1 N ILE C 132 O VAL C 167 SHEET 1 AB1 5 VAL C 5 ASP C 6 0 SHEET 2 AB1 5 HIS C 163 GLY C 171 -1 O TYR C 170 N VAL C 5 SHEET 3 AB1 5 TYR C 182 LYS C 186 -1 O LYS C 186 N LEU C 166 SHEET 4 AB1 5 TYR C 198 ALA C 202 -1 O MET C 201 N TRP C 183 SHEET 5 AB1 5 ILE C 150 TYR C 151 1 N TYR C 151 O LYS C 200 SHEET 1 AB2 2 LEU C 83 ASP C 84 0 SHEET 2 AB2 2 SER C 105 ALA C 107 -1 O VAL C 106 N LEU C 83 SHEET 1 AB3 2 PHE C 112 ASP C 114 0 SHEET 2 AB3 2 SER C 216 PRO C 218 -1 O TYR C 217 N VAL C 113 SHEET 1 AB4 3 VAL D 5 ASP D 6 0 SHEET 2 AB4 3 HIS D 163 PHE D 172 -1 O TYR D 170 N VAL D 5 SHEET 3 AB4 3 ILE D 132 ILE D 136 -1 N ILE D 132 O VAL D 167 SHEET 1 AB5 5 VAL D 5 ASP D 6 0 SHEET 2 AB5 5 HIS D 163 PHE D 172 -1 O TYR D 170 N VAL D 5 SHEET 3 AB5 5 LYS D 181 LYS D 186 -1 O LYS D 186 N LEU D 166 SHEET 4 AB5 5 TYR D 198 ALA D 202 -1 O VAL D 199 N VAL D 185 SHEET 5 AB5 5 ILE D 150 TYR D 151 1 N TYR D 151 O LYS D 200 SHEET 1 AB6 2 LEU D 83 ASP D 84 0 SHEET 2 AB6 2 SER D 105 ALA D 107 -1 O VAL D 106 N LEU D 83 SHEET 1 AB7 2 PHE D 112 ASP D 114 0 SHEET 2 AB7 2 SER D 216 PRO D 218 -1 O TYR D 217 N VAL D 113 SSBOND 1 CYS A 22 CYS A 65 1555 1555 2.03 SSBOND 2 CYS A 56 CYS A 98 1555 1555 2.07 SSBOND 3 CYS A 156 CYS A 209 1555 1555 2.04 SSBOND 4 CYS B 22 CYS B 65 1555 1555 2.01 SSBOND 5 CYS B 56 CYS B 98 1555 1555 2.09 SSBOND 6 CYS B 156 CYS B 209 1555 1555 2.03 SSBOND 7 CYS C 22 CYS C 65 1555 1555 2.04 SSBOND 8 CYS C 56 CYS C 98 1555 1555 2.04 SSBOND 9 CYS C 156 CYS C 209 1555 1555 2.03 SSBOND 10 CYS D 22 CYS D 65 1555 1555 2.03 SSBOND 11 CYS D 56 CYS D 98 1555 1555 2.08 SSBOND 12 CYS D 156 CYS D 209 1555 1555 2.04 LINK SG CYS A 25 C25 RN2 A 306 1555 1555 1.78 LINK SG CYS B 25 C25 RN2 B 405 1555 1555 1.78 LINK SG CYS C 25 C25 RN2 C 305 1555 1555 1.77 LINK SG CYS D 25 C25 RN2 D 506 1555 1555 1.78 CRYST1 57.180 62.450 67.820 105.58 93.13 115.56 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017489 0.008365 0.003880 0.00000 SCALE2 0.000000 0.017750 0.006086 0.00000 SCALE3 0.000000 0.000000 0.015611 0.00000