HEADER SIGNALING PROTEIN 26-MAR-22 7ZCB TITLE HUMAN PIKACHURIN/EGFLAM N-TERMINAL FIBRONECTIN-III (1-2) DOMAINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PIKACHURIN; COMPND 3 CHAIN: B, C; COMPND 4 SYNONYM: AGRIN-LIKE PROTEIN,EGF-LIKE,FIBRONECTIN TYPE-III AND LAMININ COMPND 5 G-LIKE DOMAIN-CONTAINING PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: N-TERMINAL GSHHHHHHGS SEQUENCE AND C-TERMINAL AAA COMPND 8 SEQUENCE ARE DUE TO CLONING INTO THE EXPRESSION VECTOR USED FOR COMPND 9 RECOMBINANT PROTEIN EXPRESSION SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EGFLAM, AGRINL, AGRNL, PIKA; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293-F; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PUPE.06.03 KEYWDS BIPOLAR CELLS, GPR179 LIGAND, PROTEOGLYCAN, SYNAPSE, SIGNALOSOME, KEYWDS 2 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.PANTALONE,S.SAVINO,L.V.VITI,F.FORNERIS REVDAT 3 07-FEB-24 7ZCB 1 REMARK REVDAT 2 02-AUG-23 7ZCB 1 JRNL REVDAT 1 19-JUL-23 7ZCB 0 JRNL AUTH D.N.PATIL,S.PANTALONE,Y.CAO,T.LABOUTE,S.J.NOVICK,S.SINGH, JRNL AUTH 2 S.SAVINO,S.FARAVELLI,F.MAGNANI,P.R.GRIFFIN,A.K.SINGH, JRNL AUTH 3 F.FORNERIS,K.A.MARTEMYANOV JRNL TITL STRUCTURE OF THE PHOTORECEPTOR SYNAPTIC ASSEMBLY OF THE JRNL TITL 2 EXTRACELLULAR MATRIX PROTEIN PIKACHURIN WITH THE ORPHAN JRNL TITL 3 RECEPTOR GPR179. JRNL REF SCI.SIGNAL. V. 16 D9539 2023 JRNL REFN ESSN 1937-9145 JRNL PMID 37490546 JRNL DOI 10.1126/SCISIGNAL.ADD9539 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20_4459 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 15452 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.245 REMARK 3 R VALUE (WORKING SET) : 0.244 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 763 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.0600 - 4.2700 0.98 2996 141 0.1895 0.2151 REMARK 3 2 4.2700 - 3.3900 0.99 2945 159 0.2314 0.2693 REMARK 3 3 3.3900 - 2.9600 0.99 2935 143 0.3061 0.3439 REMARK 3 4 2.9600 - 2.6900 0.98 2928 159 0.3175 0.3615 REMARK 3 5 2.6900 - 2.5000 0.98 2885 161 0.3931 0.4025 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.476 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.195 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.91 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3227 REMARK 3 ANGLE : 0.845 4404 REMARK 3 CHIRALITY : 0.055 503 REMARK 3 PLANARITY : 0.007 560 REMARK 3 DIHEDRAL : 13.345 1214 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 34 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.1324 54.1123 93.2811 REMARK 3 T TENSOR REMARK 3 T11: 0.3760 T22: 0.4063 REMARK 3 T33: 0.4556 T12: -0.0579 REMARK 3 T13: 0.0463 T23: 0.0138 REMARK 3 L TENSOR REMARK 3 L11: 4.0752 L22: 5.8784 REMARK 3 L33: 3.6230 L12: 0.5879 REMARK 3 L13: -0.5835 L23: -0.9375 REMARK 3 S TENSOR REMARK 3 S11: 0.0453 S12: -0.1832 S13: -0.2787 REMARK 3 S21: 0.3822 S22: 0.0629 S23: 0.1675 REMARK 3 S31: -0.3651 S32: 0.1420 S33: 0.0989 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 75 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.6520 64.3388 93.4522 REMARK 3 T TENSOR REMARK 3 T11: 0.4504 T22: 0.9432 REMARK 3 T33: 0.8633 T12: -0.0033 REMARK 3 T13: -0.0030 T23: 0.0374 REMARK 3 L TENSOR REMARK 3 L11: 0.5526 L22: 3.4827 REMARK 3 L33: 4.3548 L12: -1.3625 REMARK 3 L13: -0.7519 L23: 2.2980 REMARK 3 S TENSOR REMARK 3 S11: -0.3217 S12: -0.8313 S13: 0.1486 REMARK 3 S21: 0.4527 S22: 0.0968 S23: 0.6986 REMARK 3 S31: -1.1123 S32: -0.0732 S33: 0.0419 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 95 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.2950 58.0960 92.5707 REMARK 3 T TENSOR REMARK 3 T11: 0.4768 T22: 0.4655 REMARK 3 T33: 0.5182 T12: -0.0531 REMARK 3 T13: 0.0251 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 4.7514 L22: 5.6980 REMARK 3 L33: 7.7676 L12: -0.1249 REMARK 3 L13: 0.2516 L23: -2.7754 REMARK 3 S TENSOR REMARK 3 S11: 0.0211 S12: -0.6154 S13: 0.0079 REMARK 3 S21: 0.2995 S22: 0.2828 S23: 0.7826 REMARK 3 S31: 0.0342 S32: -1.1946 S33: -0.1944 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 129 THROUGH 148 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.1978 64.7046 68.0331 REMARK 3 T TENSOR REMARK 3 T11: 0.5741 T22: 0.6064 REMARK 3 T33: 0.5447 T12: -0.0326 REMARK 3 T13: 0.0105 T23: -0.0320 REMARK 3 L TENSOR REMARK 3 L11: 3.2413 L22: -0.0368 REMARK 3 L33: 8.9743 L12: 1.1963 REMARK 3 L13: 5.7315 L23: 1.4782 REMARK 3 S TENSOR REMARK 3 S11: -0.3617 S12: -0.0377 S13: 0.5158 REMARK 3 S21: -0.1450 S22: -0.5302 S23: -0.0046 REMARK 3 S31: -1.7888 S32: -0.1079 S33: 0.3566 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 149 THROUGH 191 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.2803 55.7623 49.6357 REMARK 3 T TENSOR REMARK 3 T11: 0.4736 T22: 0.7719 REMARK 3 T33: 0.4057 T12: -0.0267 REMARK 3 T13: 0.0439 T23: 0.0313 REMARK 3 L TENSOR REMARK 3 L11: -0.0277 L22: 2.4784 REMARK 3 L33: 3.3968 L12: 0.3705 REMARK 3 L13: -0.0423 L23: 0.6440 REMARK 3 S TENSOR REMARK 3 S11: 0.1443 S12: -0.9105 S13: -0.1811 REMARK 3 S21: 0.1560 S22: -0.0599 S23: 0.0472 REMARK 3 S31: 0.2544 S32: -1.2346 S33: -0.0606 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 192 THROUGH 203 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.0471 48.5349 51.8445 REMARK 3 T TENSOR REMARK 3 T11: 0.7934 T22: 0.5384 REMARK 3 T33: 0.7800 T12: -0.0961 REMARK 3 T13: 0.0935 T23: 0.1903 REMARK 3 L TENSOR REMARK 3 L11: 3.8772 L22: 0.6037 REMARK 3 L33: 6.6000 L12: -0.1067 REMARK 3 L13: 4.2368 L23: 0.8264 REMARK 3 S TENSOR REMARK 3 S11: 0.1627 S12: 0.3339 S13: -0.2683 REMARK 3 S21: 0.7459 S22: 0.2580 S23: 0.2237 REMARK 3 S31: 0.7520 S32: 0.2504 S33: -0.2920 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 204 THROUGH 239 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.1045 56.8092 48.3477 REMARK 3 T TENSOR REMARK 3 T11: 0.3740 T22: 0.6646 REMARK 3 T33: 0.4989 T12: 0.0284 REMARK 3 T13: 0.0595 T23: 0.0616 REMARK 3 L TENSOR REMARK 3 L11: 4.4659 L22: 2.6086 REMARK 3 L33: 8.9064 L12: 0.7097 REMARK 3 L13: 1.4149 L23: 0.9484 REMARK 3 S TENSOR REMARK 3 S11: -0.1185 S12: -0.9246 S13: 0.0052 REMARK 3 S21: 0.2040 S22: 0.0100 S23: 0.2199 REMARK 3 S31: -0.2209 S32: -1.5798 S33: 0.0367 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 34 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.9115 64.5700 -17.1893 REMARK 3 T TENSOR REMARK 3 T11: 0.9147 T22: 0.5611 REMARK 3 T33: 0.5780 T12: -0.0317 REMARK 3 T13: -0.0672 T23: 0.0680 REMARK 3 L TENSOR REMARK 3 L11: 4.1443 L22: 3.5933 REMARK 3 L33: 1.7222 L12: 1.7221 REMARK 3 L13: -1.1248 L23: 1.5479 REMARK 3 S TENSOR REMARK 3 S11: -0.2105 S12: 0.8036 S13: -0.1086 REMARK 3 S21: -0.7480 S22: 0.0498 S23: 0.2135 REMARK 3 S31: -0.0816 S32: -0.2529 S33: 0.2574 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 67 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.1081 62.6268 -13.1170 REMARK 3 T TENSOR REMARK 3 T11: 1.2015 T22: 0.5800 REMARK 3 T33: 0.9684 T12: 0.0651 REMARK 3 T13: -0.0405 T23: 0.0415 REMARK 3 L TENSOR REMARK 3 L11: 6.8404 L22: 2.8483 REMARK 3 L33: 1.2073 L12: 4.2726 REMARK 3 L13: -2.1257 L23: -1.7172 REMARK 3 S TENSOR REMARK 3 S11: -0.2522 S12: -0.1637 S13: 0.3863 REMARK 3 S21: -0.2482 S22: 0.2717 S23: -0.2509 REMARK 3 S31: 1.3399 S32: 0.0221 S33: -0.4338 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 95 THROUGH 148 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.5678 65.1039 -5.2887 REMARK 3 T TENSOR REMARK 3 T11: 0.7904 T22: 0.5897 REMARK 3 T33: 0.5972 T12: -0.0252 REMARK 3 T13: -0.0144 T23: -0.0154 REMARK 3 L TENSOR REMARK 3 L11: 0.6662 L22: 1.7891 REMARK 3 L33: 4.0006 L12: 0.2254 REMARK 3 L13: -0.6052 L23: -3.1571 REMARK 3 S TENSOR REMARK 3 S11: -0.0280 S12: 0.3049 S13: -0.1104 REMARK 3 S21: -0.3606 S22: 0.2150 S23: -0.1664 REMARK 3 S31: -0.0625 S32: -0.1077 S33: -0.1916 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 149 THROUGH 239 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.4146 51.6843 27.2172 REMARK 3 T TENSOR REMARK 3 T11: 0.4566 T22: 0.3700 REMARK 3 T33: 0.4093 T12: 0.0301 REMARK 3 T13: 0.0274 T23: -0.0104 REMARK 3 L TENSOR REMARK 3 L11: 2.1369 L22: 4.3597 REMARK 3 L33: 5.7183 L12: 0.3010 REMARK 3 L13: -0.0317 L23: -2.3014 REMARK 3 S TENSOR REMARK 3 S11: 0.0409 S12: -0.0325 S13: -0.1254 REMARK 3 S21: 0.2362 S22: 0.1049 S23: 0.2142 REMARK 3 S31: 0.2421 S32: -0.0518 S33: -0.1727 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 34 through 148 or REMARK 3 resid 150 through 239 or resid 1047 REMARK 3 through 1048 or resid 1049)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "C" and (resid 34 through 148 or REMARK 3 resid 150 through 239 or resid 1047 REMARK 3 through 1048 or resid 1049)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ZCB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-MAR-22. REMARK 100 THE DEPOSITION ID IS D_1292122024. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-SEP-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.873 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15494 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 46.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 1.59400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5FM4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG 3350, 180 MM SODIUM BROMIDE, REMARK 280 PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 35.45100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.03850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 35.45100 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.03850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 15 REMARK 465 SER B 16 REMARK 465 HIS B 17 REMARK 465 HIS B 18 REMARK 465 HIS B 19 REMARK 465 HIS B 20 REMARK 465 HIS B 21 REMARK 465 HIS B 22 REMARK 465 GLY B 23 REMARK 465 SER B 24 REMARK 465 LEU B 25 REMARK 465 ARG B 26 REMARK 465 ALA B 27 REMARK 465 ALA B 28 REMARK 465 ILE B 29 REMARK 465 ARG B 30 REMARK 465 LYS B 31 REMARK 465 PRO B 32 REMARK 465 GLY B 33 REMARK 465 GLY B 76 REMARK 465 ALA B 77 REMARK 465 ASP B 78 REMARK 465 LYS B 79 REMARK 465 SER B 80 REMARK 465 LEU B 81 REMARK 465 GLN B 82 REMARK 465 GLU B 83 REMARK 465 GLN B 84 REMARK 465 ALA B 240 REMARK 465 GLY C 15 REMARK 465 SER C 16 REMARK 465 HIS C 17 REMARK 465 HIS C 18 REMARK 465 HIS C 19 REMARK 465 HIS C 20 REMARK 465 HIS C 21 REMARK 465 HIS C 22 REMARK 465 GLY C 23 REMARK 465 SER C 24 REMARK 465 LEU C 25 REMARK 465 ARG C 26 REMARK 465 ALA C 27 REMARK 465 ALA C 28 REMARK 465 ILE C 29 REMARK 465 ARG C 30 REMARK 465 LYS C 31 REMARK 465 PRO C 32 REMARK 465 GLY C 33 REMARK 465 GLY C 76 REMARK 465 ALA C 77 REMARK 465 ASP C 78 REMARK 465 LYS C 79 REMARK 465 SER C 80 REMARK 465 LEU C 81 REMARK 465 GLN C 82 REMARK 465 GLU C 83 REMARK 465 GLN C 84 REMARK 465 ALA C 240 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 47 -160.63 -160.15 REMARK 500 ALA B 120 44.21 -96.33 REMARK 500 ALA C 120 44.69 -92.78 REMARK 500 HIS C 193 48.67 -83.78 REMARK 500 REMARK 500 REMARK: NULL DBREF 7ZCB B 24 238 UNP Q63HQ2 EGFLA_HUMAN 24 238 DBREF 7ZCB C 24 238 UNP Q63HQ2 EGFLA_HUMAN 24 238 SEQADV 7ZCB GLY B 15 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB SER B 16 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB HIS B 17 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB HIS B 18 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB HIS B 19 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB HIS B 20 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB HIS B 21 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB HIS B 22 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB GLY B 23 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB ALA B 238 UNP Q63HQ2 CYS 238 CONFLICT SEQADV 7ZCB ALA B 239 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB ALA B 240 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB GLY C 15 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB SER C 16 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB HIS C 17 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB HIS C 18 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB HIS C 19 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB HIS C 20 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB HIS C 21 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB HIS C 22 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB GLY C 23 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB ALA C 238 UNP Q63HQ2 CYS 238 CONFLICT SEQADV 7ZCB ALA C 239 UNP Q63HQ2 EXPRESSION TAG SEQADV 7ZCB ALA C 240 UNP Q63HQ2 EXPRESSION TAG SEQRES 1 B 226 GLY SER HIS HIS HIS HIS HIS HIS GLY SER LEU ARG ALA SEQRES 2 B 226 ALA ILE ARG LYS PRO GLY LYS VAL GLY PRO PRO LEU ASP SEQRES 3 B 226 ILE LYS LEU GLY ALA LEU ASN CYS THR ALA PHE SER ILE SEQRES 4 B 226 GLN TRP LYS MET PRO ARG HIS PRO GLY SER PRO ILE LEU SEQRES 5 B 226 GLY TYR THR VAL PHE TYR SER GLU VAL GLY ALA ASP LYS SEQRES 6 B 226 SER LEU GLN GLU GLN LEU HIS SER VAL PRO LEU SER ARG SEQRES 7 B 226 ASP ILE PRO THR THR GLU GLU VAL ILE GLY ASP LEU LYS SEQRES 8 B 226 PRO GLY THR GLU TYR ARG VAL SER ILE ALA ALA TYR SER SEQRES 9 B 226 GLN ALA GLY LYS GLY ARG LEU SER SER PRO ARG HIS VAL SEQRES 10 B 226 THR THR LEU SER GLN ASP SER CYS LEU PRO PRO ALA ALA SEQRES 11 B 226 PRO GLN GLN PRO HIS VAL ILE VAL VAL SER ASP SER GLU SEQRES 12 B 226 VAL ALA LEU SER TRP LYS PRO GLY ALA SER GLU GLY SER SEQRES 13 B 226 ALA PRO ILE GLN TYR TYR SER VAL GLU PHE ILE ARG PRO SEQRES 14 B 226 ASP PHE ASP LYS LYS TRP THR SER ILE HIS GLU ARG ILE SEQRES 15 B 226 GLN MET ASP SER MET VAL ILE LYS GLY LEU ASP PRO ASP SEQRES 16 B 226 THR ASN TYR GLN PHE ALA VAL ARG ALA MET ASN SER HIS SEQRES 17 B 226 GLY PRO SER PRO ARG SER TRP PRO SER ASP ILE ILE ARG SEQRES 18 B 226 THR LEU ALA ALA ALA SEQRES 1 C 226 GLY SER HIS HIS HIS HIS HIS HIS GLY SER LEU ARG ALA SEQRES 2 C 226 ALA ILE ARG LYS PRO GLY LYS VAL GLY PRO PRO LEU ASP SEQRES 3 C 226 ILE LYS LEU GLY ALA LEU ASN CYS THR ALA PHE SER ILE SEQRES 4 C 226 GLN TRP LYS MET PRO ARG HIS PRO GLY SER PRO ILE LEU SEQRES 5 C 226 GLY TYR THR VAL PHE TYR SER GLU VAL GLY ALA ASP LYS SEQRES 6 C 226 SER LEU GLN GLU GLN LEU HIS SER VAL PRO LEU SER ARG SEQRES 7 C 226 ASP ILE PRO THR THR GLU GLU VAL ILE GLY ASP LEU LYS SEQRES 8 C 226 PRO GLY THR GLU TYR ARG VAL SER ILE ALA ALA TYR SER SEQRES 9 C 226 GLN ALA GLY LYS GLY ARG LEU SER SER PRO ARG HIS VAL SEQRES 10 C 226 THR THR LEU SER GLN ASP SER CYS LEU PRO PRO ALA ALA SEQRES 11 C 226 PRO GLN GLN PRO HIS VAL ILE VAL VAL SER ASP SER GLU SEQRES 12 C 226 VAL ALA LEU SER TRP LYS PRO GLY ALA SER GLU GLY SER SEQRES 13 C 226 ALA PRO ILE GLN TYR TYR SER VAL GLU PHE ILE ARG PRO SEQRES 14 C 226 ASP PHE ASP LYS LYS TRP THR SER ILE HIS GLU ARG ILE SEQRES 15 C 226 GLN MET ASP SER MET VAL ILE LYS GLY LEU ASP PRO ASP SEQRES 16 C 226 THR ASN TYR GLN PHE ALA VAL ARG ALA MET ASN SER HIS SEQRES 17 C 226 GLY PRO SER PRO ARG SER TRP PRO SER ASP ILE ILE ARG SEQRES 18 C 226 THR LEU ALA ALA ALA HET NAG A 1 14 HET NAG A 2 14 HET BMA A 3 11 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET CL C 301 1 HET CL C 302 1 HET CL C 303 1 HET CL C 304 1 HET CL C 305 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM CL CHLORIDE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 3 BMA 2(C6 H12 O6) FORMUL 5 CL 5(CL 1-) FORMUL 10 HOH *4(H2 O) HELIX 1 AA1 SER B 135 CYS B 139 5 5 HELIX 2 AA2 SER C 135 CYS C 139 5 5 SHEET 1 AA1 3 LEU B 39 ASN B 47 0 SHEET 2 AA1 3 ALA B 50 LYS B 56 -1 O LYS B 56 N LEU B 39 SHEET 3 AA1 3 GLU B 98 ILE B 101 -1 O GLU B 99 N ILE B 53 SHEET 1 AA2 4 LEU B 90 ILE B 94 0 SHEET 2 AA2 4 ILE B 65 GLU B 74 -1 N VAL B 70 O ARG B 92 SHEET 3 AA2 4 GLU B 109 SER B 118 -1 O ALA B 115 N THR B 69 SHEET 4 AA2 4 GLY B 121 LEU B 125 -1 O GLY B 123 N ALA B 116 SHEET 1 AA3 4 LEU B 90 ILE B 94 0 SHEET 2 AA3 4 ILE B 65 GLU B 74 -1 N VAL B 70 O ARG B 92 SHEET 3 AA3 4 GLU B 109 SER B 118 -1 O ALA B 115 N THR B 69 SHEET 4 AA3 4 ARG B 129 THR B 132 -1 O ARG B 129 N VAL B 112 SHEET 1 AA4 3 HIS B 149 VAL B 152 0 SHEET 2 AA4 3 VAL B 158 SER B 161 -1 O ALA B 159 N ILE B 151 SHEET 3 AA4 3 SER B 200 ILE B 203 -1 O MET B 201 N LEU B 160 SHEET 1 AA5 4 THR B 190 SER B 191 0 SHEET 2 AA5 4 TYR B 175 ILE B 181 -1 N PHE B 180 O THR B 190 SHEET 3 AA5 4 ASN B 211 ASN B 220 -1 O ARG B 217 N SER B 177 SHEET 4 AA5 4 GLY B 223 PRO B 224 -1 O GLY B 223 N ASN B 220 SHEET 1 AA6 4 THR B 190 SER B 191 0 SHEET 2 AA6 4 TYR B 175 ILE B 181 -1 N PHE B 180 O THR B 190 SHEET 3 AA6 4 ASN B 211 ASN B 220 -1 O ARG B 217 N SER B 177 SHEET 4 AA6 4 ILE B 234 ARG B 235 -1 O ILE B 234 N TYR B 212 SHEET 1 AA7 3 LEU C 39 ASN C 47 0 SHEET 2 AA7 3 ALA C 50 LYS C 56 -1 O LYS C 56 N LEU C 39 SHEET 3 AA7 3 GLU C 98 ILE C 101 -1 O GLU C 99 N ILE C 53 SHEET 1 AA8 4 LEU C 90 ILE C 94 0 SHEET 2 AA8 4 GLY C 67 GLU C 74 -1 N TYR C 68 O ILE C 94 SHEET 3 AA8 4 GLU C 109 SER C 118 -1 O ALA C 115 N THR C 69 SHEET 4 AA8 4 GLY C 121 LEU C 125 -1 O GLY C 123 N ALA C 116 SHEET 1 AA9 4 LEU C 90 ILE C 94 0 SHEET 2 AA9 4 GLY C 67 GLU C 74 -1 N TYR C 68 O ILE C 94 SHEET 3 AA9 4 GLU C 109 SER C 118 -1 O ALA C 115 N THR C 69 SHEET 4 AA9 4 ARG C 129 THR C 132 -1 O ARG C 129 N VAL C 112 SHEET 1 AB1 3 HIS C 149 VAL C 152 0 SHEET 2 AB1 3 VAL C 158 SER C 161 -1 O SER C 161 N HIS C 149 SHEET 3 AB1 3 SER C 200 ILE C 203 -1 O ILE C 203 N VAL C 158 SHEET 1 AB2 4 THR C 190 ILE C 196 0 SHEET 2 AB2 4 TYR C 175 ILE C 181 -1 N PHE C 180 O THR C 190 SHEET 3 AB2 4 ASN C 211 ASN C 220 -1 O ALA C 215 N GLU C 179 SHEET 4 AB2 4 GLY C 223 PRO C 224 -1 O GLY C 223 N ASN C 220 SHEET 1 AB3 4 THR C 190 ILE C 196 0 SHEET 2 AB3 4 TYR C 175 ILE C 181 -1 N PHE C 180 O THR C 190 SHEET 3 AB3 4 ASN C 211 ASN C 220 -1 O ALA C 215 N GLU C 179 SHEET 4 AB3 4 ILE C 234 ARG C 235 -1 O ILE C 234 N TYR C 212 SSBOND 1 CYS B 48 CYS B 139 1555 1555 2.04 SSBOND 2 CYS C 48 CYS C 139 1555 1555 2.04 LINK ND2 ASN B 47 C1 NAG A 1 1555 1555 1.44 LINK ND2 ASN C 47 C1 NAG D 1 1555 1555 1.44 LINK O4 NAG A 1 C1 NAG A 2 1555 1555 1.44 LINK O4 NAG A 2 C1 BMA A 3 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.45 CRYST1 70.902 62.077 106.863 90.00 104.28 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014104 0.000000 0.003590 0.00000 SCALE2 0.000000 0.016109 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009656 0.00000 MTRIX1 1 -0.619191 0.773136 0.137342 -33.88113 1 MTRIX2 1 0.782347 0.622400 0.023464 13.30568 1 MTRIX3 1 -0.067341 0.121978 -0.990246 70.44887 1