data_7ZEM # _entry.id 7ZEM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.394 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7ZEM pdb_00007zem 10.2210/pdb7zem/pdb WWPDB D_1292122135 ? ? BMRB 34722 ? 10.13018/BMR34722 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-06-15 2 'Structure model' 1 1 2022-07-06 3 'Structure model' 1 2 2022-11-30 4 'Structure model' 1 3 2024-06-19 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_DOI' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' 4 2 'Structure model' '_citation_author.identifier_ORCID' 5 2 'Structure model' '_citation_author.name' 6 3 'Structure model' '_citation.journal_volume' 7 3 'Structure model' '_citation.page_first' 8 3 'Structure model' '_citation.page_last' 9 3 'Structure model' '_citation_author.identifier_ORCID' 10 4 'Structure model' '_database_2.pdbx_DOI' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 7ZEM _pdbx_database_status.recvd_initial_deposition_date 2022-03-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Structure of a parallel G-quadruplex with a snapback loop' _pdbx_database_related.db_id 34722 _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 2 _pdbx_contact_author.email weisz@uni-greifswald.de _pdbx_contact_author.name_first Klaus _pdbx_contact_author.name_last Weisz _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-2736-6606 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Jana, J.' 1 0000-0002-8696-0939 'Vianney, Y.M.' 2 ? 'Schroeder, N.' 3 ? 'Weisz, K.' 4 0000-0002-2736-6606 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 50 _citation.language ? _citation.page_first 7161 _citation.page_last 7175 _citation.title 'Guiding the folding of G-quadruplexes through loop residue interactions.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkac549 _citation.pdbx_database_id_PubMed 35758626 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jana, J.' 1 ? primary 'Vianney, Y.M.' 2 ? primary 'Schroder, N.' 3 ? primary 'Weisz, K.' 4 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;DNA (5'-D(*(DT5)P*GP*GP*CP*TP*AP*GP*GP*GP*TP*CP*AP*GP*GP*GP*TP*GP*GP*GP*TP*CP*AP*(DG3))-3') ; _entity.formula_weight 7153.664 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(THM)(DG)(DG)(DC)(DT)(DA)(DG)(DG)(DG)(DT)(DC)(DA)(DG)(DG)(DG)(DT)(DG)(DG)(DG) (DT)(DC)(DA)(DG) ; _entity_poly.pdbx_seq_one_letter_code_can XGGCTAGGGTCAGGGTGGGTCAG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THM n 1 2 DG n 1 3 DG n 1 4 DC n 1 5 DT n 1 6 DA n 1 7 DG n 1 8 DG n 1 9 DG n 1 10 DT n 1 11 DC n 1 12 DA n 1 13 DG n 1 14 DG n 1 15 DG n 1 16 DT n 1 17 DG n 1 18 DG n 1 19 DG n 1 20 DT n 1 21 DC n 1 22 DA n 1 23 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 23 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 THM 'DNA OH 5 prime terminus' . THYMIDINE ;DEOXYTHYMIDINE; 2'-DEOXYTHYMIDINE ; 'C10 H14 N2 O5' 242.229 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THM 1 1 1 THM DT5 A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DC 4 4 4 DC DC A . n A 1 5 DT 5 5 5 DT DT A . n A 1 6 DA 6 6 6 DA DA A . n A 1 7 DG 7 7 7 DG DG A . n A 1 8 DG 8 8 8 DG DG A . n A 1 9 DG 9 9 9 DG DG A . n A 1 10 DT 10 10 10 DT DT A . n A 1 11 DC 11 11 11 DC DC A . n A 1 12 DA 12 12 12 DA DA A . n A 1 13 DG 13 13 13 DG DG A . n A 1 14 DG 14 14 14 DG DG A . n A 1 15 DG 15 15 15 DG DG A . n A 1 16 DT 16 16 16 DT DT A . n A 1 17 DG 17 17 17 DG DG A . n A 1 18 DG 18 18 18 DG DG A . n A 1 19 DG 19 19 19 DG DG A . n A 1 20 DT 20 20 20 DT DT A . n A 1 21 DC 21 21 21 DC DC A . n A 1 22 DA 22 22 22 DA DA A . n A 1 23 DG 23 23 23 DG DG3 A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7ZEM _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 7ZEM _struct.title 'Structure of a parallel G-quadruplex with a snapback loop' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7ZEM _struct_keywords.text 'G-quadruplex, parallel, snapback loop, DNA' _struct_keywords.pdbx_keywords DNA # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7ZEM _struct_ref.pdbx_db_accession 7ZEM _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7ZEM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 23 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 7ZEM _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 23 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 23 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A THM 1 "O3'" ? ? ? 1_555 A DG 2 P ? ? A THM 1 A DG 2 1_555 ? ? ? ? ? ? ? 1.615 ? ? hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DG 7 O6 ? ? A DG 2 A DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DG 7 N7 ? ? A DG 2 A DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A DG 2 N7 ? ? ? 1_555 A DG 17 N2 ? ? A DG 2 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DG 17 N1 ? ? A DG 2 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DG 8 O6 ? ? A DG 3 A DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DG 8 N7 ? ? A DG 3 A DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 3 N7 ? ? ? 1_555 A DG 18 N2 ? ? A DG 3 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DG 18 N1 ? ? A DG 3 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DG 7 N1 ? ? ? 1_555 A DG 13 O6 ? ? A DG 7 A DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A DG 7 N2 ? ? ? 1_555 A DG 13 N7 ? ? A DG 7 A DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A DG 8 N1 ? ? ? 1_555 A DG 14 O6 ? ? A DG 8 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DG 14 N7 ? ? A DG 8 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DG 15 O6 ? ? A DG 9 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DG 15 N7 ? ? A DG 9 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 9 N7 ? ? ? 1_555 A DG 23 N2 ? ? A DG 9 A DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 9 O6 ? ? ? 1_555 A DG 23 N1 ? ? A DG 9 A DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 13 N1 ? ? ? 1_555 A DG 17 O6 ? ? A DG 13 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 13 N2 ? ? ? 1_555 A DG 17 N7 ? ? A DG 13 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 14 N1 ? ? ? 1_555 A DG 18 O6 ? ? A DG 14 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 14 N2 ? ? ? 1_555 A DG 18 N7 ? ? A DG 14 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 15 N1 ? ? ? 1_555 A DG 19 O6 ? ? A DG 15 A DG 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 15 N2 ? ? ? 1_555 A DG 19 N7 ? ? A DG 15 A DG 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 19 N1 ? ? ? 1_555 A DG 23 O6 ? ? A DG 19 A DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DG 19 N2 ? ? ? 1_555 A DG 23 N7 ? ? A DG 19 A DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A DT 20 N3 ? ? ? 1_555 A DA 22 N7 ? ? A DT 20 A DA 22 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog26 hydrog ? ? A DT 20 O4 ? ? ? 1_555 A DA 22 N6 ? ? A DT 20 A DA 22 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 112.53 108.30 4.23 0.30 N 2 1 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 111.56 108.30 3.26 0.30 N 3 1 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.26 121.90 -4.64 0.70 N 4 1 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.03 108.30 2.73 0.30 N 5 1 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 119.20 122.90 -3.70 0.60 N 6 1 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 111.57 108.30 3.27 0.30 N 7 1 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.32 117.00 -3.68 0.50 N 8 1 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.42 117.70 3.72 0.50 N 9 1 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 111.95 118.60 -6.65 0.60 N 10 1 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.50 108.30 3.20 0.30 N 11 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.91 108.30 3.61 0.30 N 12 1 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 112.66 108.30 4.36 0.30 N 13 1 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.24 122.90 -3.66 0.60 N 14 1 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 111.68 108.30 3.38 0.30 N 15 1 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.98 121.90 -4.92 0.70 N 16 1 "O4'" A DA 12 ? ? "C1'" A DA 12 ? ? N9 A DA 12 ? ? 110.96 108.30 2.66 0.30 N 17 1 C4 A DA 12 ? ? C5 A DA 12 ? ? C6 A DA 12 ? ? 113.64 117.00 -3.36 0.50 N 18 1 C5 A DA 12 ? ? C6 A DA 12 ? ? N1 A DA 12 ? ? 121.27 117.70 3.57 0.50 N 19 1 N1 A DA 12 ? ? C6 A DA 12 ? ? N6 A DA 12 ? ? 113.02 118.60 -5.58 0.60 N 20 1 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 110.46 108.30 2.16 0.30 N 21 1 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 111.33 108.30 3.03 0.30 N 22 1 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 110.65 108.30 2.35 0.30 N 23 1 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 110.86 108.30 2.56 0.30 N 24 1 C6 A DT 16 ? ? C5 A DT 16 ? ? C7 A DT 16 ? ? 119.20 122.90 -3.70 0.60 N 25 1 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 110.80 108.30 2.50 0.30 N 26 1 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 110.80 108.30 2.50 0.30 N 27 1 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 114.42 108.30 6.12 0.30 N 28 1 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 119.29 122.90 -3.61 0.60 N 29 1 "O4'" A DC 21 ? ? "C1'" A DC 21 ? ? N1 A DC 21 ? ? 113.04 108.30 4.74 0.30 N 30 1 N3 A DC 21 ? ? C2 A DC 21 ? ? O2 A DC 21 ? ? 117.58 121.90 -4.32 0.70 N 31 1 C5 A DA 22 ? ? C6 A DA 22 ? ? N1 A DA 22 ? ? 120.96 117.70 3.26 0.50 N 32 1 N1 A DA 22 ? ? C6 A DA 22 ? ? N6 A DA 22 ? ? 113.59 118.60 -5.01 0.60 N 33 2 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 110.46 108.30 2.16 0.30 N 34 2 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.31 121.90 -4.59 0.70 N 35 2 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.84 122.90 -4.06 0.60 N 36 2 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 111.86 108.30 3.56 0.30 N 37 2 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.34 117.00 -3.66 0.50 N 38 2 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.45 117.70 3.75 0.50 N 39 2 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 112.05 118.60 -6.55 0.60 N 40 2 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.44 108.30 2.14 0.30 N 41 2 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.01 122.90 -3.89 0.60 N 42 2 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 111.91 108.30 3.61 0.30 N 43 2 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.89 121.90 -5.01 0.70 N 44 2 "O4'" A DA 12 ? ? "C1'" A DA 12 ? ? N9 A DA 12 ? ? 110.37 108.30 2.07 0.30 N 45 2 C4 A DA 12 ? ? C5 A DA 12 ? ? C6 A DA 12 ? ? 113.78 117.00 -3.22 0.50 N 46 2 C5 A DA 12 ? ? C6 A DA 12 ? ? N1 A DA 12 ? ? 121.50 117.70 3.80 0.50 N 47 2 N1 A DA 12 ? ? C6 A DA 12 ? ? N6 A DA 12 ? ? 113.15 118.60 -5.45 0.60 N 48 2 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.21 108.30 1.91 0.30 N 49 2 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 110.42 108.30 2.12 0.30 N 50 2 C6 A DT 16 ? ? C5 A DT 16 ? ? C7 A DT 16 ? ? 118.17 122.90 -4.73 0.60 N 51 2 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 114.56 108.30 6.26 0.30 N 52 2 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 118.30 122.90 -4.60 0.60 N 53 2 "O4'" A DC 21 ? ? "C1'" A DC 21 ? ? N1 A DC 21 ? ? 111.79 108.30 3.49 0.30 N 54 2 C5 A DA 22 ? ? C6 A DA 22 ? ? N1 A DA 22 ? ? 121.04 117.70 3.34 0.50 N 55 2 N1 A DA 22 ? ? C6 A DA 22 ? ? N6 A DA 22 ? ? 113.48 118.60 -5.12 0.60 N 56 2 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 110.72 108.30 2.42 0.30 N 57 3 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 110.47 108.30 2.17 0.30 N 58 3 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.30 121.90 -4.60 0.70 N 59 3 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.83 108.30 3.53 0.30 N 60 3 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 119.24 122.90 -3.66 0.60 N 61 3 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.64 117.00 -3.36 0.50 N 62 3 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.35 117.70 3.65 0.50 N 63 3 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 112.57 118.60 -6.03 0.60 N 64 3 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.12 108.30 1.82 0.30 N 65 3 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.38 108.30 4.08 0.30 N 66 3 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.70 108.30 2.40 0.30 N 67 3 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 118.88 122.90 -4.02 0.60 N 68 3 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 112.70 108.30 4.40 0.30 N 69 3 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 117.44 121.90 -4.46 0.70 N 70 3 "O4'" A DA 12 ? ? "C1'" A DA 12 ? ? N9 A DA 12 ? ? 113.43 108.30 5.13 0.30 N 71 3 C4 A DA 12 ? ? C5 A DA 12 ? ? C6 A DA 12 ? ? 113.81 117.00 -3.19 0.50 N 72 3 C5 A DA 12 ? ? C6 A DA 12 ? ? N1 A DA 12 ? ? 121.44 117.70 3.74 0.50 N 73 3 N1 A DA 12 ? ? C6 A DA 12 ? ? N6 A DA 12 ? ? 113.09 118.60 -5.51 0.60 N 74 3 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 110.13 108.30 1.83 0.30 N 75 3 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.98 108.30 2.68 0.30 N 76 3 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 113.42 108.30 5.12 0.30 N 77 3 C6 A DT 16 ? ? C5 A DT 16 ? ? C7 A DT 16 ? ? 119.17 122.90 -3.73 0.60 N 78 3 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 111.61 108.30 3.31 0.30 N 79 3 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 111.47 108.30 3.17 0.30 N 80 3 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 115.38 108.30 7.08 0.30 N 81 3 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 119.26 122.90 -3.64 0.60 N 82 3 "O4'" A DC 21 ? ? "C1'" A DC 21 ? ? N1 A DC 21 ? ? 111.38 108.30 3.08 0.30 N 83 3 N3 A DC 21 ? ? C2 A DC 21 ? ? O2 A DC 21 ? ? 117.55 121.90 -4.35 0.70 N 84 3 C5 A DA 22 ? ? C6 A DA 22 ? ? N1 A DA 22 ? ? 121.09 117.70 3.39 0.50 N 85 3 N1 A DA 22 ? ? C6 A DA 22 ? ? N6 A DA 22 ? ? 113.67 118.60 -4.93 0.60 N 86 4 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 110.77 108.30 2.47 0.30 N 87 4 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.17 121.90 -4.73 0.70 N 88 4 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.19 108.30 2.89 0.30 N 89 4 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 119.10 122.90 -3.80 0.60 N 90 4 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 112.66 108.30 4.36 0.30 N 91 4 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.36 117.00 -3.64 0.50 N 92 4 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.50 117.70 3.80 0.50 N 93 4 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 111.99 118.60 -6.61 0.60 N 94 4 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.26 108.30 1.96 0.30 N 95 4 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.12 122.90 -3.78 0.60 N 96 4 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 111.53 108.30 3.23 0.30 N 97 4 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.91 121.90 -4.99 0.70 N 98 4 "O4'" A DA 12 ? ? "C1'" A DA 12 ? ? N9 A DA 12 ? ? 110.21 108.30 1.91 0.30 N 99 4 C4 A DA 12 ? ? C5 A DA 12 ? ? C6 A DA 12 ? ? 113.68 117.00 -3.32 0.50 N 100 4 C5 A DA 12 ? ? C6 A DA 12 ? ? N1 A DA 12 ? ? 121.46 117.70 3.76 0.50 N 101 4 N1 A DA 12 ? ? C6 A DA 12 ? ? N6 A DA 12 ? ? 113.09 118.60 -5.51 0.60 N 102 4 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 110.47 108.30 2.17 0.30 N 103 4 C6 A DT 16 ? ? C5 A DT 16 ? ? C7 A DT 16 ? ? 119.22 122.90 -3.68 0.60 N 104 4 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 113.83 108.30 5.53 0.30 N 105 4 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 119.27 122.90 -3.63 0.60 N 106 4 "O4'" A DC 21 ? ? "C1'" A DC 21 ? ? N1 A DC 21 ? ? 112.13 108.30 3.83 0.30 N 107 4 N3 A DC 21 ? ? C2 A DC 21 ? ? O2 A DC 21 ? ? 117.56 121.90 -4.34 0.70 N 108 4 C5 A DA 22 ? ? C6 A DA 22 ? ? N1 A DA 22 ? ? 121.12 117.70 3.42 0.50 N 109 4 N1 A DA 22 ? ? C6 A DA 22 ? ? N6 A DA 22 ? ? 113.47 118.60 -5.13 0.60 N 110 5 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.25 121.90 -4.65 0.70 N 111 5 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.53 108.30 3.23 0.30 N 112 5 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.88 122.90 -4.02 0.60 N 113 5 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 112.44 108.30 4.14 0.30 N 114 5 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.29 117.00 -3.71 0.50 N 115 5 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.56 117.70 3.86 0.50 N 116 5 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 111.97 118.60 -6.63 0.60 N 117 5 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 110.94 108.30 2.64 0.30 N 118 5 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.78 108.30 2.48 0.30 N 119 5 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.14 122.90 -3.76 0.60 N 120 5 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 111.70 108.30 3.40 0.30 N 121 5 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.89 121.90 -5.01 0.70 N 122 5 C4 A DA 12 ? ? C5 A DA 12 ? ? C6 A DA 12 ? ? 113.82 117.00 -3.18 0.50 N 123 5 C5 A DA 12 ? ? C6 A DA 12 ? ? N1 A DA 12 ? ? 121.35 117.70 3.65 0.50 N 124 5 N1 A DA 12 ? ? C6 A DA 12 ? ? N6 A DA 12 ? ? 113.06 118.60 -5.54 0.60 N 125 5 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 110.22 108.30 1.92 0.30 N 126 5 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.22 108.30 1.92 0.30 N 127 5 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 111.91 108.30 3.61 0.30 N 128 5 C6 A DT 16 ? ? C5 A DT 16 ? ? C7 A DT 16 ? ? 119.25 122.90 -3.65 0.60 N 129 5 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 110.69 108.30 2.39 0.30 N 130 5 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 115.13 108.30 6.83 0.30 N 131 5 "O4'" A DC 21 ? ? "C1'" A DC 21 ? ? N1 A DC 21 ? ? 111.69 108.30 3.39 0.30 N 132 5 C5 A DA 22 ? ? C6 A DA 22 ? ? N1 A DA 22 ? ? 121.13 117.70 3.43 0.50 N 133 5 N1 A DA 22 ? ? C6 A DA 22 ? ? N6 A DA 22 ? ? 113.46 118.60 -5.14 0.60 N 134 5 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 111.22 108.30 2.92 0.30 N 135 6 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 111.69 108.30 3.39 0.30 N 136 6 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 111.98 108.30 3.68 0.30 N 137 6 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.15 121.90 -4.75 0.70 N 138 6 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 111.22 108.30 2.92 0.30 N 139 6 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 119.11 122.90 -3.79 0.60 N 140 6 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.70 117.00 -3.30 0.50 N 141 6 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.42 117.70 3.72 0.50 N 142 6 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 112.38 118.60 -6.22 0.60 N 143 6 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.71 108.30 3.41 0.30 N 144 6 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.38 108.30 3.08 0.30 N 145 6 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 118.84 122.90 -4.06 0.60 N 146 6 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 112.14 108.30 3.84 0.30 N 147 6 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.92 121.90 -4.98 0.70 N 148 6 "O4'" A DA 12 ? ? "C1'" A DA 12 ? ? N9 A DA 12 ? ? 110.23 108.30 1.93 0.30 N 149 6 C4 A DA 12 ? ? C5 A DA 12 ? ? C6 A DA 12 ? ? 113.69 117.00 -3.31 0.50 N 150 6 C5 A DA 12 ? ? C6 A DA 12 ? ? N1 A DA 12 ? ? 121.41 117.70 3.71 0.50 N 151 6 N1 A DA 12 ? ? C6 A DA 12 ? ? N6 A DA 12 ? ? 113.08 118.60 -5.52 0.60 N 152 6 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 111.44 108.30 3.14 0.30 N 153 6 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 111.13 108.30 2.83 0.30 N 154 6 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 112.57 108.30 4.27 0.30 N 155 6 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 111.11 108.30 2.81 0.30 N 156 6 C6 A DT 16 ? ? C5 A DT 16 ? ? C7 A DT 16 ? ? 119.10 122.90 -3.80 0.60 N 157 6 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 111.94 108.30 3.64 0.30 N 158 6 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 114.34 108.30 6.04 0.30 N 159 6 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 119.23 122.90 -3.67 0.60 N 160 6 "O4'" A DC 21 ? ? "C1'" A DC 21 ? ? N1 A DC 21 ? ? 111.68 108.30 3.38 0.30 N 161 6 "O4'" A DA 22 ? ? "C1'" A DA 22 ? ? N9 A DA 22 ? ? 111.11 108.30 2.81 0.30 N 162 6 C5 A DA 22 ? ? C6 A DA 22 ? ? N1 A DA 22 ? ? 121.32 117.70 3.62 0.50 N 163 6 N1 A DA 22 ? ? C6 A DA 22 ? ? N6 A DA 22 ? ? 113.00 118.60 -5.60 0.60 N 164 6 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 112.96 108.30 4.66 0.30 N 165 7 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.76 108.30 2.46 0.30 N 166 7 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.18 121.90 -4.72 0.70 N 167 7 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.70 108.30 2.40 0.30 N 168 7 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.68 122.90 -4.22 0.60 N 169 7 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 112.26 108.30 3.96 0.30 N 170 7 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.30 117.00 -3.70 0.50 N 171 7 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.46 117.70 3.76 0.50 N 172 7 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 111.82 118.60 -6.78 0.60 N 173 7 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.29 108.30 2.99 0.30 N 174 7 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.31 108.30 2.01 0.30 N 175 7 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 112.03 108.30 3.73 0.30 N 176 7 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 118.85 122.90 -4.05 0.60 N 177 7 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 111.52 108.30 3.22 0.30 N 178 7 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.96 121.90 -4.94 0.70 N 179 7 "O4'" A DA 12 ? ? "C1'" A DA 12 ? ? N9 A DA 12 ? ? 110.89 108.30 2.59 0.30 N 180 7 C4 A DA 12 ? ? C5 A DA 12 ? ? C6 A DA 12 ? ? 113.65 117.00 -3.35 0.50 N 181 7 C5 A DA 12 ? ? C6 A DA 12 ? ? N1 A DA 12 ? ? 121.43 117.70 3.73 0.50 N 182 7 N1 A DA 12 ? ? C6 A DA 12 ? ? N6 A DA 12 ? ? 113.00 118.60 -5.60 0.60 N 183 7 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 111.36 108.30 3.06 0.30 N 184 7 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 111.03 108.30 2.73 0.30 N 185 7 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 110.18 108.30 1.88 0.30 N 186 7 C6 A DT 16 ? ? C5 A DT 16 ? ? C7 A DT 16 ? ? 119.13 122.90 -3.77 0.60 N 187 7 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 110.49 108.30 2.19 0.30 N 188 7 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 115.70 108.30 7.40 0.30 N 189 7 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 119.22 122.90 -3.68 0.60 N 190 7 "O4'" A DC 21 ? ? "C1'" A DC 21 ? ? N1 A DC 21 ? ? 111.67 108.30 3.37 0.30 N 191 7 N3 A DC 21 ? ? C2 A DC 21 ? ? O2 A DC 21 ? ? 117.60 121.90 -4.30 0.70 N 192 7 C5 A DA 22 ? ? C6 A DA 22 ? ? N1 A DA 22 ? ? 121.04 117.70 3.34 0.50 N 193 7 N1 A DA 22 ? ? C6 A DA 22 ? ? N6 A DA 22 ? ? 113.57 118.60 -5.03 0.60 N 194 7 "O4'" A DG 23 ? ? "C1'" A DG 23 ? ? N9 A DG 23 ? ? 110.91 108.30 2.61 0.30 N 195 8 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.17 121.90 -4.73 0.70 N 196 8 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 119.03 122.90 -3.87 0.60 N 197 8 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 110.86 108.30 2.56 0.30 N 198 8 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.41 117.00 -3.59 0.50 N 199 8 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.44 117.70 3.74 0.50 N 200 8 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 112.15 118.60 -6.45 0.60 N 201 8 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.02 108.30 2.72 0.30 N 202 8 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 110.28 108.30 1.98 0.30 N 203 8 N3 A DT 10 ? ? C2 A DT 10 ? ? O2 A DT 10 ? ? 118.47 122.30 -3.83 0.60 N 204 8 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.26 122.90 -3.64 0.60 N 205 8 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 112.88 108.30 4.58 0.30 N 206 8 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 117.08 121.90 -4.82 0.70 N 207 8 C4 A DA 12 ? ? C5 A DA 12 ? ? C6 A DA 12 ? ? 113.64 117.00 -3.36 0.50 N 208 8 C5 A DA 12 ? ? C6 A DA 12 ? ? N1 A DA 12 ? ? 121.23 117.70 3.53 0.50 N 209 8 N1 A DA 12 ? ? C6 A DA 12 ? ? N6 A DA 12 ? ? 113.10 118.60 -5.50 0.60 N 210 8 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.12 108.30 1.82 0.30 N 211 8 "C3'" A DG 14 ? ? "O3'" A DG 14 ? ? P A DG 15 ? ? 126.93 119.70 7.23 1.20 Y 212 8 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 112.32 108.30 4.02 0.30 N 213 8 C6 A DT 16 ? ? C5 A DT 16 ? ? C7 A DT 16 ? ? 119.19 122.90 -3.71 0.60 N 214 8 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 110.29 108.30 1.99 0.30 N 215 8 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 110.51 108.30 2.21 0.30 N 216 8 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 114.23 108.30 5.93 0.30 N 217 8 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 118.68 122.90 -4.22 0.60 N 218 8 "O4'" A DC 21 ? ? "C1'" A DC 21 ? ? N1 A DC 21 ? ? 112.34 108.30 4.04 0.30 N 219 8 N3 A DC 21 ? ? C2 A DC 21 ? ? O2 A DC 21 ? ? 117.57 121.90 -4.33 0.70 N 220 8 C5 A DA 22 ? ? C6 A DA 22 ? ? N1 A DA 22 ? ? 121.07 117.70 3.37 0.50 N 221 8 N1 A DA 22 ? ? C6 A DA 22 ? ? N6 A DA 22 ? ? 113.42 118.60 -5.18 0.60 N 222 9 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.26 121.90 -4.64 0.70 N 223 9 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 118.73 122.90 -4.17 0.60 N 224 9 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 112.47 108.30 4.17 0.30 N 225 9 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.53 117.00 -3.47 0.50 N 226 9 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.32 117.70 3.62 0.50 N 227 9 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 112.44 118.60 -6.16 0.60 N 228 9 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.15 108.30 2.85 0.30 N 229 9 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 118.87 122.90 -4.03 0.60 N 230 9 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 111.74 108.30 3.44 0.30 N 231 9 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 116.84 121.90 -5.06 0.70 N 232 9 C4 A DA 12 ? ? C5 A DA 12 ? ? C6 A DA 12 ? ? 113.60 117.00 -3.40 0.50 N 233 9 C5 A DA 12 ? ? C6 A DA 12 ? ? N1 A DA 12 ? ? 121.62 117.70 3.92 0.50 N 234 9 N1 A DA 12 ? ? C6 A DA 12 ? ? N6 A DA 12 ? ? 112.95 118.60 -5.65 0.60 N 235 9 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 111.40 108.30 3.10 0.30 N 236 9 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 110.80 108.30 2.50 0.30 N 237 9 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 110.55 108.30 2.25 0.30 N 238 9 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 110.58 108.30 2.28 0.30 N 239 9 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 114.94 108.30 6.64 0.30 N 240 9 C6 A DT 20 ? ? C5 A DT 20 ? ? C7 A DT 20 ? ? 118.52 122.90 -4.38 0.60 N 241 9 "O4'" A DC 21 ? ? "C1'" A DC 21 ? ? N1 A DC 21 ? ? 112.45 108.30 4.15 0.30 N 242 9 N3 A DC 21 ? ? C2 A DC 21 ? ? O2 A DC 21 ? ? 116.73 121.90 -5.17 0.70 N 243 9 C5 A DA 22 ? ? C6 A DA 22 ? ? N1 A DA 22 ? ? 121.10 117.70 3.40 0.50 N 244 9 N1 A DA 22 ? ? C6 A DA 22 ? ? N6 A DA 22 ? ? 113.22 118.60 -5.38 0.60 N 245 10 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 113.17 108.30 4.87 0.30 N 246 10 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.34 121.90 -4.56 0.70 N 247 10 "O4'" A DT 5 ? ? "C1'" A DT 5 ? ? N1 A DT 5 ? ? 110.38 108.30 2.08 0.30 N 248 10 C6 A DT 5 ? ? C5 A DT 5 ? ? C7 A DT 5 ? ? 119.24 122.90 -3.66 0.60 N 249 10 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 111.06 108.30 2.76 0.30 N 250 10 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 112.89 117.00 -4.11 0.50 N 251 10 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.57 117.70 3.87 0.50 N 252 10 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 111.69 118.60 -6.91 0.60 N 253 10 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.18 108.30 3.88 0.30 N 254 10 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.79 108.30 2.49 0.30 N 255 10 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 111.69 108.30 3.39 0.30 N 256 10 N3 A DT 10 ? ? C2 A DT 10 ? ? O2 A DT 10 ? ? 118.57 122.30 -3.73 0.60 N 257 10 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 118.86 122.90 -4.04 0.60 N 258 10 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 113.04 108.30 4.74 0.30 N 259 10 N3 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 117.02 121.90 -4.88 0.70 N 260 10 "O4'" A DA 12 ? ? "C1'" A DA 12 ? ? N9 A DA 12 ? ? 110.32 108.30 2.02 0.30 N 261 10 C4 A DA 12 ? ? C5 A DA 12 ? ? C6 A DA 12 ? ? 113.93 117.00 -3.07 0.50 N 262 10 C5 A DA 12 ? ? C6 A DA 12 ? ? N1 A DA 12 ? ? 121.11 117.70 3.41 0.50 N 263 10 N1 A DA 12 ? ? C6 A DA 12 ? ? N6 A DA 12 ? ? 114.14 118.60 -4.46 0.60 N 264 10 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 112.33 108.30 4.03 0.30 N 265 10 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 111.01 108.30 2.71 0.30 N 266 10 "O4'" A DT 16 ? ? "C1'" A DT 16 ? ? N1 A DT 16 ? ? 110.47 108.30 2.17 0.30 N 267 10 C6 A DT 16 ? ? C5 A DT 16 ? ? C7 A DT 16 ? ? 119.10 122.90 -3.80 0.60 N 268 10 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 110.35 108.30 2.05 0.30 N 269 10 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 113.18 108.30 4.88 0.30 N 270 10 "O4'" A DT 20 ? ? "C1'" A DT 20 ? ? N1 A DT 20 ? ? 114.74 108.30 6.44 0.30 N 271 10 "O4'" A DC 21 ? ? "C1'" A DC 21 ? ? N1 A DC 21 ? ? 110.97 108.30 2.67 0.30 N 272 10 C5 A DA 22 ? ? C6 A DA 22 ? ? N1 A DA 22 ? ? 121.14 117.70 3.44 0.50 N 273 10 N1 A DA 22 ? ? C6 A DA 22 ? ? N6 A DA 22 ? ? 113.11 118.60 -5.49 0.60 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG A 9 ? ? 0.074 'SIDE CHAIN' 2 1 DT A 20 ? ? 0.092 'SIDE CHAIN' 3 2 DT A 20 ? ? 0.095 'SIDE CHAIN' 4 3 DG A 8 ? ? 0.052 'SIDE CHAIN' 5 3 DT A 20 ? ? 0.057 'SIDE CHAIN' 6 3 DG A 23 ? ? 0.061 'SIDE CHAIN' 7 4 DT A 5 ? ? 0.058 'SIDE CHAIN' 8 4 DT A 20 ? ? 0.070 'SIDE CHAIN' 9 5 DT A 20 ? ? 0.100 'SIDE CHAIN' 10 6 DC A 4 ? ? 0.094 'SIDE CHAIN' 11 6 DG A 17 ? ? 0.071 'SIDE CHAIN' 12 6 DT A 20 ? ? 0.089 'SIDE CHAIN' 13 7 DT A 20 ? ? 0.094 'SIDE CHAIN' 14 8 DG A 15 ? ? 0.059 'SIDE CHAIN' 15 8 DT A 20 ? ? 0.081 'SIDE CHAIN' 16 9 DT A 20 ? ? 0.087 'SIDE CHAIN' 17 10 DG A 3 ? ? 0.056 'SIDE CHAIN' 18 10 DG A 8 ? ? 0.050 'SIDE CHAIN' 19 10 DG A 9 ? ? 0.052 'SIDE CHAIN' 20 10 DG A 14 ? ? 0.054 'SIDE CHAIN' 21 10 DT A 20 ? ? 0.091 'SIDE CHAIN' # _pdbx_entry_details.entry_id 7ZEM _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_nmr_ensemble.entry_id 7ZEM _pdbx_nmr_ensemble.conformers_calculated_total_number 10 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 7ZEM _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.3 mM DNA, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label 1 _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details '30 C; 10 mM potassium phosphate buffer, pH 7.0.' # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component DNA _pdbx_nmr_exptl_sample.concentration 0.3 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 10 _pdbx_nmr_exptl_sample_conditions.details '30 C; 10 mM potassium phosphate buffer, pH 7.0.' _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label 1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-13C HSQC aromatic' 1 isotropic 2 1 1 '2D 1H-1H NOESY' 1 isotropic 3 1 1 '2D 1H-1H COSY' 1 isotropic # _pdbx_nmr_refine.entry_id 7ZEM _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement Amber 16 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 2 'structure calculation' 'X-PLOR NIH' 3.0.3 'Schwieters, Kuszewski, Tjandra and Clore' 3 processing TopSpin 4.0.7 'Bruker Biospin' 4 'peak picking' 'CcpNmr Analysis' 2.4.2 CCPN 5 'data analysis' 'CcpNmr Analysis' 2.4.2 CCPN # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 THM "O5'" O N N 144 THM "C5'" C N N 145 THM "C4'" C N R 146 THM "O4'" O N N 147 THM "C3'" C N S 148 THM "O3'" O N N 149 THM "C2'" C N N 150 THM "C1'" C N R 151 THM N1 N N N 152 THM C2 C N N 153 THM O2 O N N 154 THM N3 N N N 155 THM C4 C N N 156 THM O4 O N N 157 THM C5 C N N 158 THM C5M C N N 159 THM C6 C N N 160 THM "HO5'" H N N 161 THM "H5'1" H N N 162 THM "H5'2" H N N 163 THM "H4'" H N N 164 THM "H3'" H N N 165 THM "HO3'" H N N 166 THM "H2'1" H N N 167 THM "H2'2" H N N 168 THM "H1'" H N N 169 THM HN3 H N N 170 THM HM51 H N N 171 THM HM52 H N N 172 THM HM53 H N N 173 THM H6 H N N 174 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 THM "O5'" "C5'" sing N N 150 THM "O5'" "HO5'" sing N N 151 THM "C5'" "C4'" sing N N 152 THM "C5'" "H5'1" sing N N 153 THM "C5'" "H5'2" sing N N 154 THM "C4'" "O4'" sing N N 155 THM "C4'" "C3'" sing N N 156 THM "C4'" "H4'" sing N N 157 THM "O4'" "C1'" sing N N 158 THM "C3'" "O3'" sing N N 159 THM "C3'" "C2'" sing N N 160 THM "C3'" "H3'" sing N N 161 THM "O3'" "HO3'" sing N N 162 THM "C2'" "C1'" sing N N 163 THM "C2'" "H2'1" sing N N 164 THM "C2'" "H2'2" sing N N 165 THM "C1'" N1 sing N N 166 THM "C1'" "H1'" sing N N 167 THM N1 C2 sing N N 168 THM N1 C6 sing N N 169 THM C2 O2 doub N N 170 THM C2 N3 sing N N 171 THM N3 C4 sing N N 172 THM N3 HN3 sing N N 173 THM C4 O4 doub N N 174 THM C4 C5 sing N N 175 THM C5 C5M sing N N 176 THM C5 C6 doub N N 177 THM C5M HM51 sing N N 178 THM C5M HM52 sing N N 179 THM C5M HM53 sing N N 180 THM C6 H6 sing N N 181 # _ndb_struct_conf_na.entry_id 7ZEM _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 2 1_555 A DG 7 1_555 1.900 3.242 -0.082 -7.369 -0.416 -90.456 1 A_DG2:DG7_A A 2 ? A 7 ? 6 3 1 A DG 17 1_555 A DG 13 1_555 -1.778 -3.374 0.001 8.509 -3.080 89.033 2 A_DG17:DG13_A A 17 ? A 13 ? 6 3 1 A DG 18 1_555 A DG 3 1_555 1.870 3.356 -0.027 3.109 -4.943 -87.439 3 A_DG18:DG3_A A 18 ? A 3 ? 6 3 1 A DT 20 1_555 A DA 22 1_555 -0.634 3.682 -1.215 12.363 -9.361 -66.971 4 A_DT20:DA22_A A 20 ? A 22 ? 23 3 1 A DG 9 1_555 A DG 23 1_555 -1.999 -3.205 0.101 -6.019 14.559 89.818 5 A_DG9:DG23_A A 9 ? A 23 ? 6 3 1 A DG 15 1_555 A DG 19 1_555 1.950 3.249 0.040 5.504 -5.125 -89.248 6 A_DG15:DG19_A A 15 ? A 19 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 2 1_555 A DG 7 1_555 A DG 17 1_555 A DG 13 1_555 -1.872 -3.284 0.208 3.874 -2.144 178.369 -1.642 0.936 0.208 -1.072 -1.937 178.371 1 AA_DG2DG17:DG13DG7_AA A 2 ? A 7 ? A 17 ? A 13 ? 1 A DG 17 1_555 A DG 13 1_555 A DG 18 1_555 A DG 3 1_555 -1.506 -3.022 3.110 5.072 -2.535 114.212 -1.772 0.949 3.109 -1.509 -3.019 114.303 2 AA_DG17DG18:DG3DG13_AA A 17 ? A 13 ? A 18 ? A 3 ? 1 A DT 20 1_555 A DA 22 1_555 A DG 9 1_555 A DG 23 1_555 -1.834 1.532 -3.087 -1.781 12.073 72.618 1.631 1.585 -2.799 10.124 1.494 73.497 3 AA_DT20DG9:DG23DA22_AA A 20 ? A 22 ? A 9 ? A 23 ? 1 A DG 9 1_555 A DG 23 1_555 A DG 15 1_555 A DG 19 1_555 -1.925 -3.284 0.036 -6.884 9.445 179.734 -1.642 0.962 0.035 4.723 3.442 179.736 4 AA_DG9DG15:DG19DG23_AA A 9 ? A 23 ? A 15 ? A 19 ? # _pdbx_audit_support.funding_organization 'German Research Foundation (DFG)' _pdbx_audit_support.country Germany _pdbx_audit_support.grant_number 410497337 _pdbx_audit_support.ordinal 1 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE NEO' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 7ZEM _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P # loop_