HEADER UNKNOWN FUNCTION 06-APR-22 7ZHF TITLE GPN-LOOP GTPASE FROM SULFOLOBUS ACIDOCALDARIUS CLOSED STATE (GPPNHP) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS ACIDOCALDARIUS; SOURCE 3 ORGANISM_TAXID: 2285; SOURCE 4 GENE: ATY89_00095, ATZ20_03140; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS GPN-LOOP, SELF-ACTIVATING, GTPASE, HOMODIMER, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR L.KORF,L.-O.ESSEN REVDAT 2 08-MAY-24 7ZHF 1 JRNL REVDAT 1 25-OCT-23 7ZHF 0 JRNL AUTH L.KORF,X.YE,M.S.VOGT,W.STEINCHEN,M.WATAD,C.VAN DER DOES, JRNL AUTH 2 M.TOURTE,S.SIVABALASARMA,S.-V.ALBERS,L.-O.ESSEN JRNL TITL ARCHAEAL GPN-LOOP GTPASES INVOLVE A LOCK-SWITCH-ROCK JRNL TITL 2 MECHANISM FOR GTP HYDROLYSIS. JRNL REF MBIO V. 14 85923 2023 JRNL REFN ESSN 2150-7511 JRNL PMID 37962382 JRNL DOI 10.1128/MBIO.00859-23 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.1_4122 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.09 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.5 REMARK 3 NUMBER OF REFLECTIONS : 24081 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.300 REMARK 3 FREE R VALUE TEST SET COUNT : 795 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.0900 - 3.2700 0.92 4041 137 0.1472 0.1801 REMARK 3 2 3.2700 - 2.6000 0.97 4204 146 0.2028 0.2375 REMARK 3 3 2.6000 - 2.2700 0.94 4103 131 0.1950 0.2043 REMARK 3 4 2.2700 - 2.0600 0.96 4097 139 0.2012 0.2254 REMARK 3 5 2.0600 - 1.9100 0.94 4084 146 0.2329 0.2820 REMARK 3 6 1.9100 - 1.8000 0.64 2757 96 0.2730 0.2886 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.156 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.324 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.25 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 70.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2117 REMARK 3 ANGLE : 0.812 2899 REMARK 3 CHIRALITY : 0.054 340 REMARK 3 PLANARITY : 0.006 367 REMARK 3 DIHEDRAL : 13.936 775 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -9 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.8929 38.2430 64.7084 REMARK 3 T TENSOR REMARK 3 T11: 0.6945 T22: 0.4291 REMARK 3 T33: 0.4532 T12: -0.0045 REMARK 3 T13: 0.0777 T23: 0.0284 REMARK 3 L TENSOR REMARK 3 L11: 0.9258 L22: 1.8611 REMARK 3 L33: 2.3926 L12: 0.2406 REMARK 3 L13: 1.4565 L23: 0.8071 REMARK 3 S TENSOR REMARK 3 S11: -0.1032 S12: -0.2000 S13: -0.1222 REMARK 3 S21: 0.6313 S22: -0.0373 S23: 0.2873 REMARK 3 S31: 1.1736 S32: -0.6576 S33: 0.1830 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 14 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.9622 33.6472 57.6921 REMARK 3 T TENSOR REMARK 3 T11: 0.7403 T22: 0.4465 REMARK 3 T33: 0.4138 T12: 0.1774 REMARK 3 T13: -0.0172 T23: 0.0460 REMARK 3 L TENSOR REMARK 3 L11: 4.2778 L22: 3.8106 REMARK 3 L33: 6.2103 L12: -0.6396 REMARK 3 L13: 0.9262 L23: -1.6295 REMARK 3 S TENSOR REMARK 3 S11: -0.2077 S12: -0.3160 S13: -0.3154 REMARK 3 S21: 0.7654 S22: 0.2356 S23: -0.0336 REMARK 3 S31: 1.1043 S32: 0.4635 S33: -0.0439 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 52 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.3873 26.0489 41.3400 REMARK 3 T TENSOR REMARK 3 T11: 1.1053 T22: 0.7245 REMARK 3 T33: 0.9797 T12: -0.4425 REMARK 3 T13: 0.0299 T23: -0.1029 REMARK 3 L TENSOR REMARK 3 L11: 7.8886 L22: 3.0838 REMARK 3 L33: 4.7411 L12: -2.0364 REMARK 3 L13: 4.5721 L23: -1.2654 REMARK 3 S TENSOR REMARK 3 S11: 0.0025 S12: 1.2248 S13: -2.2167 REMARK 3 S21: -0.1609 S22: 0.8830 S23: 0.3852 REMARK 3 S31: 1.9854 S32: -0.7928 S33: -0.8662 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.4632 32.6446 49.9419 REMARK 3 T TENSOR REMARK 3 T11: 0.7486 T22: 0.6638 REMARK 3 T33: 0.7455 T12: -0.1826 REMARK 3 T13: 0.1986 T23: 0.1487 REMARK 3 L TENSOR REMARK 3 L11: 2.6672 L22: 2.5008 REMARK 3 L33: 8.1382 L12: 0.6457 REMARK 3 L13: 0.2094 L23: -2.4380 REMARK 3 S TENSOR REMARK 3 S11: -0.7309 S12: -0.5974 S13: -1.2633 REMARK 3 S21: 0.3160 S22: -0.0091 S23: 0.3931 REMARK 3 S31: 2.0638 S32: -1.4212 S33: 0.6261 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 94 THROUGH 175 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.4112 46.2439 48.6884 REMARK 3 T TENSOR REMARK 3 T11: 0.2513 T22: 0.2415 REMARK 3 T33: 0.2738 T12: 0.0278 REMARK 3 T13: 0.0061 T23: -0.0089 REMARK 3 L TENSOR REMARK 3 L11: 2.9231 L22: 3.6851 REMARK 3 L33: 6.8753 L12: -0.1161 REMARK 3 L13: 0.0333 L23: -0.9963 REMARK 3 S TENSOR REMARK 3 S11: -0.0325 S12: -0.1378 S13: 0.1451 REMARK 3 S21: 0.2463 S22: 0.2088 S23: 0.1305 REMARK 3 S31: -0.1038 S32: -0.1028 S33: -0.1996 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 176 THROUGH 212 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.0689 60.5021 39.5616 REMARK 3 T TENSOR REMARK 3 T11: 0.7197 T22: 0.6771 REMARK 3 T33: 0.7440 T12: -0.2292 REMARK 3 T13: 0.2449 T23: -0.1126 REMARK 3 L TENSOR REMARK 3 L11: 6.0839 L22: 5.1407 REMARK 3 L33: 3.2223 L12: -0.3797 REMARK 3 L13: 2.5569 L23: -0.8440 REMARK 3 S TENSOR REMARK 3 S11: 0.1569 S12: 0.2859 S13: 1.0775 REMARK 3 S21: -0.2159 S22: 0.0149 S23: -0.3499 REMARK 3 S31: -0.7957 S32: 0.9105 S33: -0.1777 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 213 THROUGH 240 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.9612 49.0680 57.8527 REMARK 3 T TENSOR REMARK 3 T11: 0.4832 T22: 0.7375 REMARK 3 T33: 0.3791 T12: -0.0976 REMARK 3 T13: -0.1118 T23: -0.0893 REMARK 3 L TENSOR REMARK 3 L11: 7.0723 L22: 4.0138 REMARK 3 L33: 7.5173 L12: 1.6162 REMARK 3 L13: -5.2350 L23: 0.8188 REMARK 3 S TENSOR REMARK 3 S11: 0.2191 S12: -1.0014 S13: 0.4318 REMARK 3 S21: 0.7385 S22: 0.2457 S23: -0.3713 REMARK 3 S31: -0.6165 S32: 1.4200 S33: -0.4375 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ZHF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-APR-22. REMARK 100 THE DEPOSITION ID IS D_1292121529. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-SEP-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : FLEXIBLE TWO-STAGE FOCUSING X REMARK 200 -RAY OPTICS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24163 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 41.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.1 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.02900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 54.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.42100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: 1YR7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.018 M CACL2, 0.09M SODIUM ACETATE REMARK 280 PH=4.6, 27% (V/V) MPD, 10% (V/V) GLYCEROL, PH 4.6, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 19.46566 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.47500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.48010 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 19.46566 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 42.47500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 37.48010 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -78.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 38.93131 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 74.96021 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 530 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 592 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 GLY A 241 REMARK 465 GLY A 242 REMARK 465 GLU A 243 REMARK 465 ASP A 244 REMARK 465 PHE A 245 REMARK 465 GLU A 246 REMARK 465 THR A 247 REMARK 465 GLU A 248 REMARK 465 GLU A 249 REMARK 465 PRO A 250 REMARK 465 ASN A 251 REMARK 465 PRO A 252 REMARK 465 ARG A 253 REMARK 465 LEU A 254 REMARK 465 ALA A 255 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 LYS A 85 CG CD CE NZ REMARK 470 LYS A 207 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H GLN A 230 O HOH A 405 1.25 REMARK 500 H SER A 148 O HOH A 401 1.28 REMARK 500 H SER A 148 O HOH A 401 1.28 REMARK 500 H GLN A 236 O HOH A 404 1.38 REMARK 500 H GLN A 236 O HOH A 404 1.39 REMARK 500 H LEU A 179 O HOH A 402 1.43 REMARK 500 H SER A 131 O HOH A 406 1.45 REMARK 500 H SER A 131 O HOH A 406 1.45 REMARK 500 O LYS A 144 O HOH A 401 1.54 REMARK 500 O SER A 175 O HOH A 402 1.70 REMARK 500 O ASP A 199 O HOH A 403 1.78 REMARK 500 O TYR A 232 O HOH A 404 1.80 REMARK 500 OD1 ASP A 229 O HOH A 405 1.87 REMARK 500 N SER A 131 O HOH A 406 1.95 REMARK 500 O PRO A 163 O HOH A 406 1.95 REMARK 500 OH TYR A 55 OD2 ASP A 90 1.96 REMARK 500 O HOH A 487 O HOH A 539 1.98 REMARK 500 N VAL A 235 O HOH A 404 1.99 REMARK 500 O ALA A 240 O HOH A 407 1.99 REMARK 500 N LEU A 179 O HOH A 402 2.02 REMARK 500 O HOH A 460 O HOH A 540 2.04 REMARK 500 O SER A 131 O HOH A 406 2.05 REMARK 500 N GLN A 230 O HOH A 405 2.08 REMARK 500 O HOH A 478 O HOH A 572 2.09 REMARK 500 O HOH A 429 O HOH A 572 2.09 REMARK 500 N GLN A 236 O HOH A 404 2.11 REMARK 500 N GLN A 236 O HOH A 404 2.11 REMARK 500 O HOH A 502 O HOH A 518 2.11 REMARK 500 O GLY A 196 O HOH A 408 2.11 REMARK 500 O HOH A 457 O HOH A 552 2.11 REMARK 500 N SER A 148 O HOH A 401 2.12 REMARK 500 N SER A 148 O HOH A 401 2.12 REMARK 500 O HOH A 537 O HOH A 566 2.14 REMARK 500 O HOH A 567 O HOH A 582 2.14 REMARK 500 O HOH A 496 O HOH A 512 2.14 REMARK 500 OE1 GLU A 211 O HOH A 409 2.15 REMARK 500 OG SER A 148 O HOH A 410 2.17 REMARK 500 O HOH A 498 O HOH A 504 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 559 O HOH A 573 2657 2.07 REMARK 500 O HOH A 582 O HOH A 583 1455 2.10 REMARK 500 O HOH A 571 O HOH A 576 2657 2.11 REMARK 500 O HOH A 508 O HOH A 573 2657 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 83 37.88 -98.13 REMARK 500 ASP A 161 59.74 -101.44 REMARK 500 ASP A 161 59.74 -99.47 REMARK 500 ILE A 186 -64.88 -90.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 587 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH A 588 DISTANCE = 6.14 ANGSTROMS REMARK 525 HOH A 589 DISTANCE = 6.29 ANGSTROMS REMARK 525 HOH A 590 DISTANCE = 6.32 ANGSTROMS REMARK 525 HOH A 591 DISTANCE = 6.44 ANGSTROMS REMARK 525 HOH A 592 DISTANCE = 6.48 ANGSTROMS REMARK 525 HOH A 593 DISTANCE = 7.47 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 15 OG1 REMARK 620 2 GNP A 301 O1G 174.1 REMARK 620 3 GNP A 301 O2B 90.0 86.6 REMARK 620 4 HOH A 420 O 84.6 90.9 94.0 REMARK 620 5 HOH A 454 O 88.7 95.9 86.8 173.3 REMARK 620 6 HOH A 484 O 92.8 90.5 176.7 84.6 95.0 REMARK 620 N 1 2 3 4 5 DBREF1 7ZHF A 2 254 UNP A0A0U2WWJ1_9CREN DBREF2 7ZHF A A0A0U2WWJ1 2 254 SEQADV 7ZHF MET A -18 UNP A0A0U2WWJ INITIATING METHIONINE SEQADV 7ZHF HIS A -17 UNP A0A0U2WWJ EXPRESSION TAG SEQADV 7ZHF HIS A -16 UNP A0A0U2WWJ EXPRESSION TAG SEQADV 7ZHF HIS A -15 UNP A0A0U2WWJ EXPRESSION TAG SEQADV 7ZHF HIS A -14 UNP A0A0U2WWJ EXPRESSION TAG SEQADV 7ZHF HIS A -13 UNP A0A0U2WWJ EXPRESSION TAG SEQADV 7ZHF HIS A -12 UNP A0A0U2WWJ EXPRESSION TAG SEQADV 7ZHF HIS A -11 UNP A0A0U2WWJ EXPRESSION TAG SEQADV 7ZHF HIS A -10 UNP A0A0U2WWJ EXPRESSION TAG SEQADV 7ZHF HIS A -9 UNP A0A0U2WWJ EXPRESSION TAG SEQADV 7ZHF HIS A -8 UNP A0A0U2WWJ EXPRESSION TAG SEQADV 7ZHF LEU A -7 UNP A0A0U2WWJ EXPRESSION TAG SEQADV 7ZHF GLU A -6 UNP A0A0U2WWJ EXPRESSION TAG SEQADV 7ZHF VAL A -5 UNP A0A0U2WWJ EXPRESSION TAG SEQADV 7ZHF LEU A -4 UNP A0A0U2WWJ EXPRESSION TAG SEQADV 7ZHF PHE A -3 UNP A0A0U2WWJ EXPRESSION TAG SEQADV 7ZHF GLN A -2 UNP A0A0U2WWJ EXPRESSION TAG SEQADV 7ZHF GLY A -1 UNP A0A0U2WWJ EXPRESSION TAG SEQADV 7ZHF PRO A 0 UNP A0A0U2WWJ EXPRESSION TAG SEQADV 7ZHF SER A 1 UNP A0A0U2WWJ EXPRESSION TAG SEQADV 7ZHF ALA A 255 UNP A0A0U2WWJ EXPRESSION TAG SEQRES 1 A 274 MET HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS LEU GLU SEQRES 2 A 274 VAL LEU PHE GLN GLY PRO SER TYR PHE ILE PHE VAL LEU SEQRES 3 A 274 GLY THR ALA GLY SER GLY LYS THR THR LEU VAL LYS ALA SEQRES 4 A 274 LEU GLN ASP TYR LEU LEU ASN ASN GLU LEU ASP THR ALA SEQRES 5 A 274 ILE ILE ASN LEU ASP PRO ALA VAL GLU VAL LEU PRO TYR SEQRES 6 A 274 LYS PRO ASP ILE ASP ALA ARG GLU TYR VAL ASP VAL TYR SEQRES 7 A 274 ASP VAL MET ASN LYS TYR GLU LEU GLY PRO ASN SER SER SEQRES 8 A 274 LEU VAL ILE SER VAL ASP LEU LEU LEU THR LYS ALA LYS SEQRES 9 A 274 GLU LEU LYS GLU ASP LEU ASN GLN LEU GLN ALA ASN TYR SEQRES 10 A 274 VAL LEU VAL ASP THR PRO GLY GLN ILE GLU LEU PHE ALA SEQRES 11 A 274 TYR ARG ASP THR GLY LYS ILE LEU SER SER PHE ILE SER SEQRES 12 A 274 GLU GLY SER LYS SER VAL SER VAL PHE LEU PHE ASP SER SEQRES 13 A 274 TYR LEU SER LYS ASP PRO LYS SER PHE LEU SER LEU PHE SEQRES 14 A 274 LEU LEU SER SER SER ILE LYS PHE ARG ILE ASP MET PRO SEQRES 15 A 274 GLN ILE SER VAL LEU SER LYS VAL ASP LEU LEU SER SER SEQRES 16 A 274 SER GLU LEU GLU ARG MET ARG SER TRP ILE GLU ASP GLY SEQRES 17 A 274 SER ILE ILE ASP GLU LEU GLY SER ILE ASP GLU TYR SER SEQRES 18 A 274 PHE GLU LEU VAL LYS THR ILE VAL GLU ASN LEU GLU SER SEQRES 19 A 274 PHE PRO ILE PRO VAL SER SER THR ASN PHE SER GLY LEU SEQRES 20 A 274 ASP GLN LEU TYR ALA GLU VAL GLN LYS VAL LEU ALA GLY SEQRES 21 A 274 GLY GLU ASP PHE GLU THR GLU GLU PRO ASN PRO ARG LEU SEQRES 22 A 274 ALA HET GNP A 301 45 HET MG A 302 1 HET GOL A 303 14 HET CL A 304 1 HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GNP C10 H17 N6 O13 P3 FORMUL 3 MG MG 2+ FORMUL 4 GOL C3 H8 O3 FORMUL 5 CL CL 1- FORMUL 6 HOH *193(H2 O) HELIX 1 AA1 GLY A 13 ASN A 28 1 16 HELIX 2 AA2 ARG A 53 TYR A 55 5 3 HELIX 3 AA3 ASP A 57 GLU A 66 1 10 HELIX 4 AA4 GLY A 68 LYS A 83 1 16 HELIX 5 AA5 LYS A 83 LEU A 94 1 12 HELIX 6 AA6 ILE A 107 TYR A 112 1 6 HELIX 7 AA7 ASP A 114 SER A 124 1 11 HELIX 8 AA8 SER A 137 LYS A 141 1 5 HELIX 9 AA9 ASP A 142 ILE A 160 1 19 HELIX 10 AB1 LYS A 170 LEU A 174 5 5 HELIX 11 AB2 SER A 175 ASP A 188 1 14 HELIX 12 AB3 GLY A 189 GLY A 196 5 8 HELIX 13 AB4 ASP A 199 ASN A 212 1 14 HELIX 14 AB5 GLY A 227 ALA A 240 1 14 SHEET 1 AA1 7 ILE A 50 ASP A 51 0 SHEET 2 AA1 7 THR A 32 ASN A 36 1 N ASN A 36 O ILE A 50 SHEET 3 AA1 7 TYR A 98 ASP A 102 1 O LEU A 100 N ILE A 35 SHEET 4 AA1 7 TYR A 2 GLY A 8 1 N ILE A 4 O VAL A 101 SHEET 5 AA1 7 LYS A 128 ASP A 136 1 O VAL A 132 N PHE A 5 SHEET 6 AA1 7 GLN A 164 SER A 169 1 O VAL A 167 N PHE A 135 SHEET 7 AA1 7 ILE A 218 PRO A 219 1 O ILE A 218 N SER A 166 LINK OG1 THR A 15 MG MG A 302 1555 1555 2.20 LINK O1G GNP A 301 MG MG A 302 1555 1555 2.21 LINK O2B GNP A 301 MG MG A 302 1555 1555 1.95 LINK MG MG A 302 O HOH A 420 1555 1555 2.31 LINK MG MG A 302 O HOH A 454 1555 1555 2.26 LINK MG MG A 302 O HOH A 484 1555 1555 1.94 CRYST1 46.305 84.950 75.322 90.00 95.62 90.00 I 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021596 0.000000 0.002124 0.00000 SCALE2 0.000000 0.011772 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013340 0.00000