HEADER OXIDOREDUCTASE 10-APR-22 7ZJB TITLE STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF THE BACTERIAL LYTIC TITLE 2 POLYSACCHARIDE MONOOXYGENASE SCLPMO10D COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE SECRETED CELLULOSE-BINDING PROTEIN; COMPND 3 CHAIN: B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES COELICOLOR A3(2); SOURCE 3 ORGANISM_TAXID: 100226; SOURCE 4 STRAIN: ATCC BAA-471 / A3(2) / M145; SOURCE 5 GENE: SCO1734; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS LPMO, AA10, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.K.VOTVIK,A.K.ROHR,A.A.STEPNOV,B.BISSARO,M.SORLIE,V.G.H.EIJSINK, AUTHOR 2 Z.FORSBERG REVDAT 3 06-NOV-24 7ZJB 1 REMARK REVDAT 2 07-FEB-24 7ZJB 1 REMARK REVDAT 1 19-APR-23 7ZJB 0 JRNL AUTH A.K.VOTVIK,A.K.ROHR,B.BISSARO,A.A.STEPNOV,M.SORLIE, JRNL AUTH 2 V.G.H.EIJSINK,Z.FORSBERG JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF THE CATALYTIC JRNL TITL 2 DOMAIN OF A CELL-WALL ANCHORED BACTERIAL LYTIC JRNL TITL 3 POLYSACCHARIDE MONOOXYGENASE FROM STREPTOMYCES COELICOLOR. JRNL REF SCI REP V. 13 5345 2023 JRNL REFN ESSN 2045-2322 JRNL PMID 37005446 JRNL DOI 10.1038/S41598-023-32263-7 REMARK 2 REMARK 2 RESOLUTION. 1.37 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.37 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 52497 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.130 REMARK 3 R VALUE (WORKING SET) : 0.129 REMARK 3 FREE R VALUE : 0.152 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2712 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.37 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.40 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3636 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.2570 REMARK 3 BIN FREE R VALUE SET COUNT : 193 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1351 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 52 REMARK 3 SOLVENT ATOMS : 214 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.09000 REMARK 3 B22 (A**2) : 0.09000 REMARK 3 B33 (A**2) : -0.17000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.038 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.038 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.025 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.426 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.981 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.977 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1465 ; 0.020 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1248 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2012 ; 2.104 ; 1.644 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2913 ; 1.684 ; 1.579 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 202 ;19.067 ; 5.693 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 62 ;27.878 ;21.290 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 195 ;11.759 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;15.190 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 181 ; 0.110 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1906 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 315 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 738 ; 2.122 ; 2.048 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 736 ; 2.092 ; 2.041 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 925 ; 2.530 ; 3.086 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 925 ; 2.499 ; 3.082 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 724 ; 5.165 ; 2.550 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 688 ; 4.010 ; 2.407 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1023 ; 4.277 ; 3.446 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1635 ; 9.619 ;26.843 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1574 ; 4.319 ;25.535 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 2710 ; 5.253 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 7ZJB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-APR-22. REMARK 100 THE DEPOSITION ID IS D_1292122331. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97702 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : POINTLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55188 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.370 REMARK 200 RESOLUTION RANGE LOW (A) : 48.570 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.60 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 22.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.37 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 12.70 REMARK 200 R MERGE FOR SHELL (I) : 1.36900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6IF7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M AMMONIUM SULFATE, 0.1 M SODIUM REMARK 280 CACODYLATE PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.85900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 29.54000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 29.54000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 109.28850 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 29.54000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 29.54000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 36.42950 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 29.54000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 29.54000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 109.28850 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 29.54000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 29.54000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 36.42950 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 72.85900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 B 205 LIES ON A SPECIAL POSITION. REMARK 375 O2 SO4 B 205 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O4 SO4 B 211 O HOH B 301 1.63 REMARK 500 O2 SO4 B 211 O HOH B 302 1.73 REMARK 500 O HOH B 441 O HOH B 475 2.03 REMARK 500 O1 SO4 B 211 O HOH B 303 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O1 SO4 B 205 O4 SO4 B 205 8555 1.24 REMARK 500 O3 SO4 B 205 O4 SO4 B 205 8555 1.42 REMARK 500 S SO4 B 205 O4 SO4 B 205 8555 1.43 REMARK 500 S SO4 B 205 O3 SO4 B 205 8555 1.54 REMARK 500 S SO4 B 205 O1 SO4 B 205 8555 1.57 REMARK 500 O1 SO4 B 205 O3 SO4 B 205 8555 1.67 REMARK 500 O HOH B 369 O HOH B 434 6445 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 152 CD GLU B 152 OE2 0.066 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 62 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG B 62 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG B 153 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 GLY B 155 C - N - CA ANGL. DEV. = -17.7 DEGREES REMARK 500 GLY B 181 CA - C - O ANGL. DEV. = -13.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 21 74.71 -154.00 REMARK 500 LYS B 53 48.96 -97.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 201 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 1 N REMARK 620 2 HIS B 1 ND1 94.8 REMARK 620 3 HIS B 101 NE2 101.0 164.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 212 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 177 OD1 REMARK 620 2 HOH B 317 O 85.6 REMARK 620 3 HOH B 375 O 104.2 97.8 REMARK 620 4 HOH B 456 O 105.5 166.2 87.6 REMARK 620 N 1 2 3 DBREF 7ZJB B 1 181 UNP Q9S296 Q9S296_STRCO 34 214 SEQRES 1 B 181 HIS GLY SER MET GLY ASP PRO VAL SER ARG VAL SER GLN SEQRES 2 B 181 CYS HIS ALA GLU GLY PRO GLU ASN PRO LYS SER ALA ALA SEQRES 3 B 181 CYS ARG ALA ALA VAL ALA ALA GLY GLY THR GLN ALA LEU SEQRES 4 B 181 TYR ASP TRP ASN GLY ILE ARG ILE GLY ASN ALA ALA GLY SEQRES 5 B 181 LYS HIS GLN GLU LEU ILE PRO ASP GLY ARG LEU CYS SER SEQRES 6 B 181 ALA ASN ASP PRO ALA PHE LYS GLY LEU ASP LEU ALA ARG SEQRES 7 B 181 ALA ASP TRP PRO ALA THR GLY VAL SER SER GLY SER TYR SEQRES 8 B 181 THR PHE LYS TYR ARG VAL THR ALA PRO HIS LYS GLY THR SEQRES 9 B 181 PHE LYS VAL TYR LEU THR LYS PRO GLY TYR ASP PRO SER SEQRES 10 B 181 LYS PRO LEU GLY TRP GLY ASP LEU ASP LEU SER ALA PRO SEQRES 11 B 181 VAL ALA THR SER THR ASP PRO VAL ALA SER GLY GLY PHE SEQRES 12 B 181 TYR THR PHE SER GLY THR LEU PRO GLU ARG SER GLY LYS SEQRES 13 B 181 HIS LEU LEU TYR ALA VAL TRP GLN ARG SER ASP SER PRO SEQRES 14 B 181 GLU ALA PHE TYR SER CYS SER ASP VAL THR PHE GLY HET CU B 201 1 HET SO4 B 202 5 HET SO4 B 203 5 HET SO4 B 204 5 HET SO4 B 205 5 HET SO4 B 206 5 HET SO4 B 207 5 HET SO4 B 208 5 HET SO4 B 209 5 HET SO4 B 210 5 HET SO4 B 211 5 HET NA B 212 1 HETNAM CU COPPER (II) ION HETNAM SO4 SULFATE ION HETNAM NA SODIUM ION FORMUL 2 CU CU 2+ FORMUL 3 SO4 10(O4 S 2-) FORMUL 13 NA NA 1+ FORMUL 14 HOH *214(H2 O) HELIX 1 AA1 SER B 9 GLY B 18 1 10 HELIX 2 AA2 SER B 24 GLY B 35 1 12 HELIX 3 AA3 THR B 36 ASP B 41 1 6 HELIX 4 AA4 LYS B 53 ILE B 58 1 6 HELIX 5 AA5 ASP B 68 LEU B 76 5 9 HELIX 6 AA6 GLY B 121 LEU B 125 5 5 SHEET 1 AA1 3 GLY B 2 ASP B 6 0 SHEET 2 AA1 3 GLY B 89 VAL B 97 -1 O LYS B 94 N GLY B 5 SHEET 3 AA1 3 PHE B 143 LEU B 150 -1 O LEU B 150 N GLY B 89 SHEET 1 AA2 3 ARG B 46 ILE B 47 0 SHEET 2 AA2 3 ALA B 171 THR B 179 -1 O ALA B 171 N ILE B 47 SHEET 3 AA2 3 THR B 84 GLY B 85 1 N THR B 84 O ASP B 177 SHEET 1 AA3 5 ARG B 46 ILE B 47 0 SHEET 2 AA3 5 ALA B 171 THR B 179 -1 O ALA B 171 N ILE B 47 SHEET 3 AA3 5 LYS B 156 ARG B 165 -1 N ALA B 161 O SER B 174 SHEET 4 AA3 5 GLY B 103 LEU B 109 -1 N TYR B 108 O TYR B 160 SHEET 5 AA3 5 ALA B 132 THR B 135 -1 O SER B 134 N PHE B 105 SSBOND 1 CYS B 14 CYS B 27 1555 1555 2.19 SSBOND 2 CYS B 64 CYS B 175 1555 1555 2.72 LINK N HIS B 1 CU CU B 201 1555 1555 2.24 LINK ND1 HIS B 1 CU CU B 201 1555 1555 1.94 LINK NE2 HIS B 101 CU CU B 201 1555 1555 2.02 LINK OD1 ASP B 177 NA NA B 212 1555 1555 2.60 LINK NA NA B 212 O HOH B 317 1555 1555 2.63 LINK NA NA B 212 O HOH B 375 1555 1555 3.11 LINK NA NA B 212 O HOH B 456 1555 1555 2.70 CISPEP 1 ASP B 6 PRO B 7 0 -0.80 CRYST1 59.080 59.080 145.718 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016926 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016926 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006863 0.00000