data_7ZKM # _entry.id 7ZKM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.384 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7ZKM pdb_00007zkm 10.2210/pdb7zkm/pdb WWPDB D_1292122202 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-11-30 2 'Structure model' 1 1 2022-12-07 3 'Structure model' 1 2 2022-12-14 4 'Structure model' 1 3 2024-01-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' citation 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_abbrev' 2 2 'Structure model' '_citation.journal_id_CSD' 3 2 'Structure model' '_citation.year' 4 3 'Structure model' '_citation.journal_id_ISSN' 5 3 'Structure model' '_citation.journal_volume' 6 3 'Structure model' '_citation.page_first' 7 3 'Structure model' '_citation.page_last' 8 3 'Structure model' '_citation.pdbx_database_id_PubMed' 9 3 'Structure model' '_citation.title' 10 4 'Structure model' '_citation.country' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7ZKM _pdbx_database_status.recvd_initial_deposition_date 2022-04-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'Same protein:DNA complex in a different crystal form' 7ZKL unspecified PDB 'Same protein:DNA complex in a different crystal form' 7ZKN unspecified PDB 'Same protein:DNA complex in a different crystal form' 7ZKO unspecified # _pdbx_contact_author.id 2 _pdbx_contact_author.email filomena.sica@unina.it _pdbx_contact_author.name_first Filomena _pdbx_contact_author.name_last Sica _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4501-4476 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Troisi, R.' 1 0000-0002-3484-3589 'Sica, F.' 2 0000-0003-4501-4476 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Mol Ther Nucleic Acids' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2162-2531 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 30 _citation.language ? _citation.page_first 585 _citation.page_last 594 _citation.title 'A terminal functionalization strategy reveals unusual binding abilities of anti-thrombin anticoagulant aptamers.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.omtn.2022.11.007 _citation.pdbx_database_id_PubMed 36457701 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Troisi, R.' 1 ? primary 'Riccardi, C.' 2 ? primary 'Perez de Carvasal, K.' 3 ? primary 'Smietana, M.' 4 ? primary 'Morvan, F.' 5 ? primary 'Del Vecchio, P.' 6 ? primary 'Montesarchio, D.' 7 ? primary 'Sica, F.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Thrombin light chain' 4096.534 1 3.4.21.5 ? ? ? 2 polymer nat 'Thrombin heavy chain' 29780.219 1 3.4.21.5 ? ? ? 3 polymer syn TBA-NNp/DDp 4743.051 2 ? ? ? ? 4 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? 5 non-polymer syn 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' 453.986 1 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 7 non-polymer syn ;3-[13-methyl-5,7,12,14-tetrakis(oxidanylidene)-6,13-diazatetracyclo[6.6.2.0^{4,16}.0^{11,15}]hexadeca-1(15),2,4(16),8,10-pentaen-6-yl]propyl 3-[5,7,12,14-tetrakis(oxidanylidene)-13-(3-oxidanylpropyl)-6,13-diazatetracyclo[6.6.2.0^{4,16}.0^{11,15}]hexadeca-1,3,8(16),9,11(15)-pentaen-6-yl]propyl hydrogen phosphate ; 1044.737 2 ? ? ? ? 8 non-polymer syn '3-[5-[3-bis(oxidanyl)phosphanyloxypropoxy]naphthalen-1-yl]oxypropyl 3-(5-oxidanylnaphthalen-1-yl)oxypropyl hydrogen phosphate' 620.521 2 ? ? ? ? 9 non-polymer syn 'POTASSIUM ION' 39.098 2 ? ? ? ? 10 water nat water 18.015 44 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR L ? 2 'polypeptide(L)' no no ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; H ? 3 polydeoxyribonucleotide no no '(DG)(DG)(DT)(DT)(DG)(DG)(DT)(DG)(DT)(DG)(DG)(DT)(DT)(DG)(DG)' GGTTGGTGTGGTTGG A,B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' 0G6 6 'SODIUM ION' NA 7 ;3-[13-methyl-5,7,12,14-tetrakis(oxidanylidene)-6,13-diazatetracyclo[6.6.2.0^{4,16}.0^{11,15}]hexadeca-1(15),2,4(16),8,10-pentaen-6-yl]propyl 3-[5,7,12,14-tetrakis(oxidanylidene)-13-(3-oxidanylpropyl)-6,13-diazatetracyclo[6.6.2.0^{4,16}.0^{11,15}]hexadeca-1,3,8(16),9,11(15)-pentaen-6-yl]propyl hydrogen phosphate ; JL0 8 '3-[5-[3-bis(oxidanyl)phosphanyloxypropoxy]naphthalen-1-yl]oxypropyl 3-(5-oxidanylnaphthalen-1-yl)oxypropyl hydrogen phosphate' JKR 9 'POTASSIUM ION' K 10 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 PHE n 1 3 GLY n 1 4 SER n 1 5 GLY n 1 6 GLU n 1 7 ALA n 1 8 ASP n 1 9 CYS n 1 10 GLY n 1 11 LEU n 1 12 ARG n 1 13 PRO n 1 14 LEU n 1 15 PHE n 1 16 GLU n 1 17 LYS n 1 18 LYS n 1 19 SER n 1 20 LEU n 1 21 GLU n 1 22 ASP n 1 23 LYS n 1 24 THR n 1 25 GLU n 1 26 ARG n 1 27 GLU n 1 28 LEU n 1 29 LEU n 1 30 GLU n 1 31 SER n 1 32 TYR n 1 33 ILE n 1 34 ASP n 1 35 GLY n 1 36 ARG n 2 1 ILE n 2 2 VAL n 2 3 GLU n 2 4 GLY n 2 5 SER n 2 6 ASP n 2 7 ALA n 2 8 GLU n 2 9 ILE n 2 10 GLY n 2 11 MET n 2 12 SER n 2 13 PRO n 2 14 TRP n 2 15 GLN n 2 16 VAL n 2 17 MET n 2 18 LEU n 2 19 PHE n 2 20 ARG n 2 21 LYS n 2 22 SER n 2 23 PRO n 2 24 GLN n 2 25 GLU n 2 26 LEU n 2 27 LEU n 2 28 CYS n 2 29 GLY n 2 30 ALA n 2 31 SER n 2 32 LEU n 2 33 ILE n 2 34 SER n 2 35 ASP n 2 36 ARG n 2 37 TRP n 2 38 VAL n 2 39 LEU n 2 40 THR n 2 41 ALA n 2 42 ALA n 2 43 HIS n 2 44 CYS n 2 45 LEU n 2 46 LEU n 2 47 TYR n 2 48 PRO n 2 49 PRO n 2 50 TRP n 2 51 ASP n 2 52 LYS n 2 53 ASN n 2 54 PHE n 2 55 THR n 2 56 GLU n 2 57 ASN n 2 58 ASP n 2 59 LEU n 2 60 LEU n 2 61 VAL n 2 62 ARG n 2 63 ILE n 2 64 GLY n 2 65 LYS n 2 66 HIS n 2 67 SER n 2 68 ARG n 2 69 THR n 2 70 ARG n 2 71 TYR n 2 72 GLU n 2 73 ARG n 2 74 ASN n 2 75 ILE n 2 76 GLU n 2 77 LYS n 2 78 ILE n 2 79 SER n 2 80 MET n 2 81 LEU n 2 82 GLU n 2 83 LYS n 2 84 ILE n 2 85 TYR n 2 86 ILE n 2 87 HIS n 2 88 PRO n 2 89 ARG n 2 90 TYR n 2 91 ASN n 2 92 TRP n 2 93 ARG n 2 94 GLU n 2 95 ASN n 2 96 LEU n 2 97 ASP n 2 98 ARG n 2 99 ASP n 2 100 ILE n 2 101 ALA n 2 102 LEU n 2 103 MET n 2 104 LYS n 2 105 LEU n 2 106 LYS n 2 107 LYS n 2 108 PRO n 2 109 VAL n 2 110 ALA n 2 111 PHE n 2 112 SER n 2 113 ASP n 2 114 TYR n 2 115 ILE n 2 116 HIS n 2 117 PRO n 2 118 VAL n 2 119 CYS n 2 120 LEU n 2 121 PRO n 2 122 ASP n 2 123 ARG n 2 124 GLU n 2 125 THR n 2 126 ALA n 2 127 ALA n 2 128 SER n 2 129 LEU n 2 130 LEU n 2 131 GLN n 2 132 ALA n 2 133 GLY n 2 134 TYR n 2 135 LYS n 2 136 GLY n 2 137 ARG n 2 138 VAL n 2 139 THR n 2 140 GLY n 2 141 TRP n 2 142 GLY n 2 143 ASN n 2 144 LEU n 2 145 LYS n 2 146 GLU n 2 147 THR n 2 148 TRP n 2 149 THR n 2 150 ALA n 2 151 ASN n 2 152 VAL n 2 153 GLY n 2 154 LYS n 2 155 GLY n 2 156 GLN n 2 157 PRO n 2 158 SER n 2 159 VAL n 2 160 LEU n 2 161 GLN n 2 162 VAL n 2 163 VAL n 2 164 ASN n 2 165 LEU n 2 166 PRO n 2 167 ILE n 2 168 VAL n 2 169 GLU n 2 170 ARG n 2 171 PRO n 2 172 VAL n 2 173 CYS n 2 174 LYS n 2 175 ASP n 2 176 SER n 2 177 THR n 2 178 ARG n 2 179 ILE n 2 180 ARG n 2 181 ILE n 2 182 THR n 2 183 ASP n 2 184 ASN n 2 185 MET n 2 186 PHE n 2 187 CYS n 2 188 ALA n 2 189 GLY n 2 190 TYR n 2 191 LYS n 2 192 PRO n 2 193 ASP n 2 194 GLU n 2 195 GLY n 2 196 LYS n 2 197 ARG n 2 198 GLY n 2 199 ASP n 2 200 ALA n 2 201 CYS n 2 202 GLU n 2 203 GLY n 2 204 ASP n 2 205 SER n 2 206 GLY n 2 207 GLY n 2 208 PRO n 2 209 PHE n 2 210 VAL n 2 211 MET n 2 212 LYS n 2 213 SER n 2 214 PRO n 2 215 PHE n 2 216 ASN n 2 217 ASN n 2 218 ARG n 2 219 TRP n 2 220 TYR n 2 221 GLN n 2 222 MET n 2 223 GLY n 2 224 ILE n 2 225 VAL n 2 226 SER n 2 227 TRP n 2 228 GLY n 2 229 GLU n 2 230 GLY n 2 231 CYS n 2 232 ASP n 2 233 ARG n 2 234 ASP n 2 235 GLY n 2 236 LYS n 2 237 TYR n 2 238 GLY n 2 239 PHE n 2 240 TYR n 2 241 THR n 2 242 HIS n 2 243 VAL n 2 244 PHE n 2 245 ARG n 2 246 LEU n 2 247 LYS n 2 248 LYS n 2 249 TRP n 2 250 ILE n 2 251 GLN n 2 252 LYS n 2 253 VAL n 2 254 ILE n 2 255 ASP n 2 256 GLN n 2 257 PHE n 2 258 GLY n 2 259 GLU n 3 1 DG n 3 2 DG n 3 3 DT n 3 4 DT n 3 5 DG n 3 6 DG n 3 7 DT n 3 8 DG n 3 9 DT n 3 10 DG n 3 11 DG n 3 12 DT n 3 13 DT n 3 14 DG n 3 15 DG n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample 1 36 human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 1 259 human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 15 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 4 DGlcpNAcb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 4 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 4 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 4 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0G6 peptide-like . 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' PPACK 'C21 H34 Cl N6 O3 1' 453.986 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 JKR non-polymer . '3-[5-[3-bis(oxidanyl)phosphanyloxypropoxy]naphthalen-1-yl]oxypropyl 3-(5-oxidanylnaphthalen-1-yl)oxypropyl hydrogen phosphate' ? 'C29 H34 O11 P2' 620.521 JL0 non-polymer . ;3-[13-methyl-5,7,12,14-tetrakis(oxidanylidene)-6,13-diazatetracyclo[6.6.2.0^{4,16}.0^{11,15}]hexadeca-1(15),2,4(16),8,10-pentaen-6-yl]propyl 3-[5,7,12,14-tetrakis(oxidanylidene)-13-(3-oxidanylpropyl)-6,13-diazatetracyclo[6.6.2.0^{4,16}.0^{11,15}]hexadeca-1,3,8(16),9,11(15)-pentaen-6-yl]propyl hydrogen phosphate ; ? 'C43 H43 N4 O21 P3' 1044.737 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 -5 ? ? ? L . n A 1 2 PHE 2 -4 ? ? ? L . n A 1 3 GLY 3 -3 ? ? ? L . n A 1 4 SER 4 -2 ? ? ? L . n A 1 5 GLY 5 -1 ? ? ? L . n A 1 6 GLU 6 0 ? ? ? L . n A 1 7 ALA 7 1 1 ALA ALA L B n A 1 8 ASP 8 1 1 ASP ASP L A n A 1 9 CYS 9 1 1 CYS CYS L . n A 1 10 GLY 10 2 2 GLY GLY L . n A 1 11 LEU 11 3 3 LEU LEU L . n A 1 12 ARG 12 4 4 ARG ARG L . n A 1 13 PRO 13 5 5 PRO PRO L . n A 1 14 LEU 14 6 6 LEU LEU L . n A 1 15 PHE 15 7 7 PHE PHE L . n A 1 16 GLU 16 8 8 GLU GLU L . n A 1 17 LYS 17 9 9 LYS LYS L . n A 1 18 LYS 18 10 10 LYS LYS L . n A 1 19 SER 19 11 11 SER SER L . n A 1 20 LEU 20 12 12 LEU LEU L . n A 1 21 GLU 21 13 13 GLU GLU L . n A 1 22 ASP 22 14 14 ASP ASP L . n A 1 23 LYS 23 14 14 LYS LYS L A n A 1 24 THR 24 14 14 THR THR L B n A 1 25 GLU 25 14 14 GLU GLU L C n A 1 26 ARG 26 14 14 ARG ARG L D n A 1 27 GLU 27 14 14 GLU GLU L E n A 1 28 LEU 28 14 14 LEU LEU L F n A 1 29 LEU 29 14 14 LEU LEU L G n A 1 30 GLU 30 14 14 GLU GLU L H n A 1 31 SER 31 14 14 SER SER L I n A 1 32 TYR 32 14 14 TYR TYR L J n A 1 33 ILE 33 14 14 ILE ILE L K n A 1 34 ASP 34 15 ? ? ? L . n A 1 35 GLY 35 16 ? ? ? L . n A 1 36 ARG 36 17 ? ? ? L . n B 2 1 ILE 1 16 16 ILE ILE H . n B 2 2 VAL 2 17 17 VAL VAL H . n B 2 3 GLU 3 18 18 GLU GLU H . n B 2 4 GLY 4 19 19 GLY GLY H . n B 2 5 SER 5 20 20 SER SER H . n B 2 6 ASP 6 21 21 ASP ASP H . n B 2 7 ALA 7 22 22 ALA ALA H . n B 2 8 GLU 8 23 23 GLU GLU H . n B 2 9 ILE 9 24 24 ILE ILE H . n B 2 10 GLY 10 25 25 GLY GLY H . n B 2 11 MET 11 26 26 MET MET H . n B 2 12 SER 12 27 27 SER SER H . n B 2 13 PRO 13 28 28 PRO PRO H . n B 2 14 TRP 14 29 29 TRP TRP H . n B 2 15 GLN 15 30 30 GLN GLN H . n B 2 16 VAL 16 31 31 VAL VAL H . n B 2 17 MET 17 32 32 MET MET H . n B 2 18 LEU 18 33 33 LEU LEU H . n B 2 19 PHE 19 34 34 PHE PHE H . n B 2 20 ARG 20 35 35 ARG ARG H . n B 2 21 LYS 21 36 36 LYS LYS H . n B 2 22 SER 22 36 36 SER SER H A n B 2 23 PRO 23 37 37 PRO PRO H . n B 2 24 GLN 24 38 38 GLN GLN H . n B 2 25 GLU 25 39 39 GLU GLU H . n B 2 26 LEU 26 40 40 LEU LEU H . n B 2 27 LEU 27 41 41 LEU LEU H . n B 2 28 CYS 28 42 42 CYS CYS H . n B 2 29 GLY 29 43 43 GLY GLY H . n B 2 30 ALA 30 44 44 ALA ALA H . n B 2 31 SER 31 45 45 SER SER H . n B 2 32 LEU 32 46 46 LEU LEU H . n B 2 33 ILE 33 47 47 ILE ILE H . n B 2 34 SER 34 48 48 SER SER H . n B 2 35 ASP 35 49 49 ASP ASP H . n B 2 36 ARG 36 50 50 ARG ARG H . n B 2 37 TRP 37 51 51 TRP TRP H . n B 2 38 VAL 38 52 52 VAL VAL H . n B 2 39 LEU 39 53 53 LEU LEU H . n B 2 40 THR 40 54 54 THR THR H . n B 2 41 ALA 41 55 55 ALA ALA H . n B 2 42 ALA 42 56 56 ALA ALA H . n B 2 43 HIS 43 57 57 HIS HIS H . n B 2 44 CYS 44 58 58 CYS CYS H . n B 2 45 LEU 45 59 59 LEU LEU H . n B 2 46 LEU 46 60 60 LEU LEU H . n B 2 47 TYR 47 60 60 TYR TYR H A n B 2 48 PRO 48 60 60 PRO PRO H B n B 2 49 PRO 49 60 60 PRO PRO H C n B 2 50 TRP 50 60 60 TRP TRP H D n B 2 51 ASP 51 60 60 ASP ASP H E n B 2 52 LYS 52 60 60 LYS LYS H F n B 2 53 ASN 53 60 60 ASN ASN H G n B 2 54 PHE 54 60 60 PHE PHE H H n B 2 55 THR 55 60 60 THR THR H I n B 2 56 GLU 56 61 61 GLU GLU H . n B 2 57 ASN 57 62 62 ASN ASN H . n B 2 58 ASP 58 63 63 ASP ASP H . n B 2 59 LEU 59 64 64 LEU LEU H . n B 2 60 LEU 60 65 65 LEU LEU H . n B 2 61 VAL 61 66 66 VAL VAL H . n B 2 62 ARG 62 67 67 ARG ARG H . n B 2 63 ILE 63 68 68 ILE ILE H . n B 2 64 GLY 64 69 69 GLY GLY H . n B 2 65 LYS 65 70 70 LYS LYS H . n B 2 66 HIS 66 71 71 HIS HIS H . n B 2 67 SER 67 72 72 SER SER H . n B 2 68 ARG 68 73 73 ARG ARG H . n B 2 69 THR 69 74 74 THR THR H . n B 2 70 ARG 70 75 75 ARG ARG H . n B 2 71 TYR 71 76 76 TYR TYR H . n B 2 72 GLU 72 77 77 GLU GLU H . n B 2 73 ARG 73 77 77 ARG ARG H A n B 2 74 ASN 74 78 78 ASN ASN H . n B 2 75 ILE 75 79 79 ILE ILE H . n B 2 76 GLU 76 80 80 GLU GLU H . n B 2 77 LYS 77 81 81 LYS LYS H . n B 2 78 ILE 78 82 82 ILE ILE H . n B 2 79 SER 79 83 83 SER SER H . n B 2 80 MET 80 84 84 MET MET H . n B 2 81 LEU 81 85 85 LEU LEU H . n B 2 82 GLU 82 86 86 GLU GLU H . n B 2 83 LYS 83 87 87 LYS LYS H . n B 2 84 ILE 84 88 88 ILE ILE H . n B 2 85 TYR 85 89 89 TYR TYR H . n B 2 86 ILE 86 90 90 ILE ILE H . n B 2 87 HIS 87 91 91 HIS HIS H . n B 2 88 PRO 88 92 92 PRO PRO H . n B 2 89 ARG 89 93 93 ARG ARG H . n B 2 90 TYR 90 94 94 TYR TYR H . n B 2 91 ASN 91 95 95 ASN ASN H . n B 2 92 TRP 92 96 96 TRP TRP H . n B 2 93 ARG 93 97 97 ARG ARG H . n B 2 94 GLU 94 97 97 GLU GLU H A n B 2 95 ASN 95 98 98 ASN ASN H . n B 2 96 LEU 96 99 99 LEU LEU H . n B 2 97 ASP 97 100 100 ASP ASP H . n B 2 98 ARG 98 101 101 ARG ARG H . n B 2 99 ASP 99 102 102 ASP ASP H . n B 2 100 ILE 100 103 103 ILE ILE H . n B 2 101 ALA 101 104 104 ALA ALA H . n B 2 102 LEU 102 105 105 LEU LEU H . n B 2 103 MET 103 106 106 MET MET H . n B 2 104 LYS 104 107 107 LYS LYS H . n B 2 105 LEU 105 108 108 LEU LEU H . n B 2 106 LYS 106 109 109 LYS LYS H . n B 2 107 LYS 107 110 110 LYS LYS H . n B 2 108 PRO 108 111 111 PRO PRO H . n B 2 109 VAL 109 112 112 VAL VAL H . n B 2 110 ALA 110 113 113 ALA ALA H . n B 2 111 PHE 111 114 114 PHE PHE H . n B 2 112 SER 112 115 115 SER SER H . n B 2 113 ASP 113 116 116 ASP ASP H . n B 2 114 TYR 114 117 117 TYR TYR H . n B 2 115 ILE 115 118 118 ILE ILE H . n B 2 116 HIS 116 119 119 HIS HIS H . n B 2 117 PRO 117 120 120 PRO PRO H . n B 2 118 VAL 118 121 121 VAL VAL H . n B 2 119 CYS 119 122 122 CYS CYS H . n B 2 120 LEU 120 123 123 LEU LEU H . n B 2 121 PRO 121 124 124 PRO PRO H . n B 2 122 ASP 122 125 125 ASP ASP H . n B 2 123 ARG 123 126 126 ARG ARG H . n B 2 124 GLU 124 127 127 GLU GLU H . n B 2 125 THR 125 128 128 THR THR H . n B 2 126 ALA 126 129 129 ALA ALA H . n B 2 127 ALA 127 129 129 ALA ALA H A n B 2 128 SER 128 129 129 SER SER H B n B 2 129 LEU 129 129 129 LEU LEU H C n B 2 130 LEU 130 130 130 LEU LEU H . n B 2 131 GLN 131 131 131 GLN GLN H . n B 2 132 ALA 132 132 132 ALA ALA H . n B 2 133 GLY 133 133 133 GLY GLY H . n B 2 134 TYR 134 134 134 TYR TYR H . n B 2 135 LYS 135 135 135 LYS LYS H . n B 2 136 GLY 136 136 136 GLY GLY H . n B 2 137 ARG 137 137 137 ARG ARG H . n B 2 138 VAL 138 138 138 VAL VAL H . n B 2 139 THR 139 139 139 THR THR H . n B 2 140 GLY 140 140 140 GLY GLY H . n B 2 141 TRP 141 141 141 TRP TRP H . n B 2 142 GLY 142 142 142 GLY GLY H . n B 2 143 ASN 143 143 143 ASN ASN H . n B 2 144 LEU 144 144 144 LEU LEU H . n B 2 145 LYS 145 145 145 LYS LYS H . n B 2 146 GLU 146 146 146 GLU GLU H . n B 2 147 THR 147 146 ? ? ? H A n B 2 148 TRP 148 146 ? ? ? H B n B 2 149 THR 149 146 ? ? ? H C n B 2 150 ALA 150 146 ? ? ? H D n B 2 151 ASN 151 146 ? ? ? H E n B 2 152 VAL 152 146 ? ? ? H F n B 2 153 GLY 153 146 ? ? ? H G n B 2 154 LYS 154 146 ? ? ? H H n B 2 155 GLY 155 146 ? ? ? H I n B 2 156 GLN 156 151 151 GLN GLN H . n B 2 157 PRO 157 152 152 PRO PRO H . n B 2 158 SER 158 153 153 SER SER H . n B 2 159 VAL 159 154 154 VAL VAL H . n B 2 160 LEU 160 155 155 LEU LEU H . n B 2 161 GLN 161 156 156 GLN GLN H . n B 2 162 VAL 162 157 157 VAL VAL H . n B 2 163 VAL 163 158 158 VAL VAL H . n B 2 164 ASN 164 159 159 ASN ASN H . n B 2 165 LEU 165 160 160 LEU LEU H . n B 2 166 PRO 166 161 161 PRO PRO H . n B 2 167 ILE 167 162 162 ILE ILE H . n B 2 168 VAL 168 163 163 VAL VAL H . n B 2 169 GLU 169 164 164 GLU GLU H . n B 2 170 ARG 170 165 165 ARG ARG H . n B 2 171 PRO 171 166 166 PRO PRO H . n B 2 172 VAL 172 167 167 VAL VAL H . n B 2 173 CYS 173 168 168 CYS CYS H . n B 2 174 LYS 174 169 169 LYS LYS H . n B 2 175 ASP 175 170 170 ASP ASP H . n B 2 176 SER 176 171 171 SER SER H . n B 2 177 THR 177 172 172 THR THR H . n B 2 178 ARG 178 173 173 ARG ARG H . n B 2 179 ILE 179 174 174 ILE ILE H . n B 2 180 ARG 180 175 175 ARG ARG H . n B 2 181 ILE 181 176 176 ILE ILE H . n B 2 182 THR 182 177 177 THR THR H . n B 2 183 ASP 183 178 178 ASP ASP H . n B 2 184 ASN 184 179 179 ASN ASN H . n B 2 185 MET 185 180 180 MET MET H . n B 2 186 PHE 186 181 181 PHE PHE H . n B 2 187 CYS 187 182 182 CYS CYS H . n B 2 188 ALA 188 183 183 ALA ALA H . n B 2 189 GLY 189 184 184 GLY GLY H . n B 2 190 TYR 190 184 184 TYR TYR H A n B 2 191 LYS 191 185 185 LYS LYS H . n B 2 192 PRO 192 186 186 PRO PRO H . n B 2 193 ASP 193 186 186 ASP ASP H A n B 2 194 GLU 194 186 186 GLU GLU H B n B 2 195 GLY 195 186 186 GLY GLY H C n B 2 196 LYS 196 186 186 LYS LYS H D n B 2 197 ARG 197 187 187 ARG ARG H . n B 2 198 GLY 198 188 188 GLY GLY H . n B 2 199 ASP 199 189 189 ASP ASP H . n B 2 200 ALA 200 190 190 ALA ALA H . n B 2 201 CYS 201 191 191 CYS CYS H . n B 2 202 GLU 202 192 192 GLU GLU H . n B 2 203 GLY 203 193 193 GLY GLY H . n B 2 204 ASP 204 194 194 ASP ASP H . n B 2 205 SER 205 195 195 SER SER H . n B 2 206 GLY 206 196 196 GLY GLY H . n B 2 207 GLY 207 197 197 GLY GLY H . n B 2 208 PRO 208 198 198 PRO PRO H . n B 2 209 PHE 209 199 199 PHE PHE H . n B 2 210 VAL 210 200 200 VAL VAL H . n B 2 211 MET 211 201 201 MET MET H . n B 2 212 LYS 212 202 202 LYS LYS H . n B 2 213 SER 213 203 203 SER SER H . n B 2 214 PRO 214 204 204 PRO PRO H . n B 2 215 PHE 215 204 204 PHE PHE H A n B 2 216 ASN 216 204 204 ASN ASN H B n B 2 217 ASN 217 205 205 ASN ASN H . n B 2 218 ARG 218 206 206 ARG ARG H . n B 2 219 TRP 219 207 207 TRP TRP H . n B 2 220 TYR 220 208 208 TYR TYR H . n B 2 221 GLN 221 209 209 GLN GLN H . n B 2 222 MET 222 210 210 MET MET H . n B 2 223 GLY 223 211 211 GLY GLY H . n B 2 224 ILE 224 212 212 ILE ILE H . n B 2 225 VAL 225 213 213 VAL VAL H . n B 2 226 SER 226 214 214 SER SER H . n B 2 227 TRP 227 215 215 TRP TRP H . n B 2 228 GLY 228 216 216 GLY GLY H . n B 2 229 GLU 229 217 217 GLU GLU H . n B 2 230 GLY 230 219 219 GLY GLY H . n B 2 231 CYS 231 220 220 CYS CYS H . n B 2 232 ASP 232 221 221 ASP ASP H A n B 2 233 ARG 233 221 221 ARG ARG H . n B 2 234 ASP 234 222 222 ASP ASP H . n B 2 235 GLY 235 223 223 GLY GLY H . n B 2 236 LYS 236 224 224 LYS LYS H . n B 2 237 TYR 237 225 225 TYR TYR H . n B 2 238 GLY 238 226 226 GLY GLY H . n B 2 239 PHE 239 227 227 PHE PHE H . n B 2 240 TYR 240 228 228 TYR TYR H . n B 2 241 THR 241 229 229 THR THR H . n B 2 242 HIS 242 230 230 HIS HIS H . n B 2 243 VAL 243 231 231 VAL VAL H . n B 2 244 PHE 244 232 232 PHE PHE H . n B 2 245 ARG 245 233 233 ARG ARG H . n B 2 246 LEU 246 234 234 LEU LEU H . n B 2 247 LYS 247 235 235 LYS LYS H . n B 2 248 LYS 248 236 236 LYS LYS H . n B 2 249 TRP 249 237 237 TRP TRP H . n B 2 250 ILE 250 238 238 ILE ILE H . n B 2 251 GLN 251 239 239 GLN GLN H . n B 2 252 LYS 252 240 240 LYS LYS H . n B 2 253 VAL 253 241 241 VAL VAL H . n B 2 254 ILE 254 242 242 ILE ILE H . n B 2 255 ASP 255 243 243 ASP ASP H . n B 2 256 GLN 256 244 244 GLN GLN H . n B 2 257 PHE 257 245 245 PHE PHE H . n B 2 258 GLY 258 246 246 GLY GLY H . n B 2 259 GLU 259 247 247 GLU GLU H . n C 3 1 DG 1 1 1 DG DG A . n C 3 2 DG 2 2 2 DG DG A . n C 3 3 DT 3 3 3 DT DT A . n C 3 4 DT 4 4 4 DT DT A . n C 3 5 DG 5 5 5 DG DG A . n C 3 6 DG 6 6 6 DG DG A . n C 3 7 DT 7 7 ? ? ? A . n C 3 8 DG 8 8 ? ? ? A . n C 3 9 DT 9 9 ? ? ? A . n C 3 10 DG 10 10 10 DG DG A . n C 3 11 DG 11 11 11 DG DG A . n C 3 12 DT 12 12 12 DT DT A . n C 3 13 DT 13 13 13 DT DT A . n C 3 14 DG 14 14 14 DG DG A . n C 3 15 DG 15 15 15 DG DG A . n D 3 1 DG 1 1 1 DG DG B . n D 3 2 DG 2 2 2 DG DG B . n D 3 3 DT 3 3 3 DT DT B . n D 3 4 DT 4 4 4 DT DT B . n D 3 5 DG 5 5 5 DG DG B . n D 3 6 DG 6 6 6 DG DG B . n D 3 7 DT 7 7 7 DT DT B . n D 3 8 DG 8 8 8 DG DG B . n D 3 9 DT 9 9 9 DT DT B . n D 3 10 DG 10 10 10 DG DG B . n D 3 11 DG 11 11 11 DG DG B . n D 3 12 DT 12 12 12 DT DT B . n D 3 13 DT 13 13 13 DT DT B . n D 3 14 DG 14 14 14 DG DG B . n D 3 15 DG 15 15 15 DG DG B . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero E 4 NAG 1 C NAG 1 H NAG 303 n E 4 NAG 2 C NAG 2 H NAG 304 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code F 5 0G6 1 301 301 0G6 0G6 H . G 6 NA 1 302 302 NA NA H . H 7 JL0 1 101 101 JL0 5NN A . I 8 JKR 1 102 102 JKR 3DD A . J 9 K 1 103 103 K K A . K 7 JL0 1 101 101 JL0 5NN B . L 8 JKR 1 102 102 JKR 3DD B . M 9 K 1 103 103 K K B . N 10 HOH 1 101 102 HOH HOH L . N 10 HOH 2 102 103 HOH HOH L . N 10 HOH 3 103 101 HOH HOH L . O 10 HOH 1 401 439 HOH HOH H . O 10 HOH 2 402 423 HOH HOH H . O 10 HOH 3 403 428 HOH HOH H . O 10 HOH 4 404 422 HOH HOH H . O 10 HOH 5 405 431 HOH HOH H . O 10 HOH 6 406 411 HOH HOH H . O 10 HOH 7 407 433 HOH HOH H . O 10 HOH 8 408 426 HOH HOH H . O 10 HOH 9 409 430 HOH HOH H . O 10 HOH 10 410 425 HOH HOH H . O 10 HOH 11 411 436 HOH HOH H . O 10 HOH 12 412 421 HOH HOH H . O 10 HOH 13 413 401 HOH HOH H . O 10 HOH 14 414 412 HOH HOH H . O 10 HOH 15 415 429 HOH HOH H . O 10 HOH 16 416 420 HOH HOH H . O 10 HOH 17 417 403 HOH HOH H . O 10 HOH 18 418 410 HOH HOH H . O 10 HOH 19 419 435 HOH HOH H . O 10 HOH 20 420 432 HOH HOH H . O 10 HOH 21 421 405 HOH HOH H . O 10 HOH 22 422 424 HOH HOH H . O 10 HOH 23 423 416 HOH HOH H . O 10 HOH 24 424 406 HOH HOH H . O 10 HOH 25 425 437 HOH HOH H . O 10 HOH 26 426 404 HOH HOH H . O 10 HOH 27 427 417 HOH HOH H . O 10 HOH 28 428 409 HOH HOH H . O 10 HOH 29 429 419 HOH HOH H . O 10 HOH 30 430 414 HOH HOH H . O 10 HOH 31 431 402 HOH HOH H . O 10 HOH 32 432 413 HOH HOH H . O 10 HOH 33 433 427 HOH HOH H . O 10 HOH 34 434 418 HOH HOH H . O 10 HOH 35 435 438 HOH HOH H . O 10 HOH 36 436 407 HOH HOH H . O 10 HOH 37 437 434 HOH HOH H . O 10 HOH 38 438 408 HOH HOH H . O 10 HOH 39 439 415 HOH HOH H . P 10 HOH 1 201 201 HOH HOH A . Q 10 HOH 1 201 201 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A DG 10 ? P ? C DG 10 P 2 1 Y 1 A DG 10 ? OP1 ? C DG 10 OP1 3 1 Y 1 A DG 10 ? OP2 ? C DG 10 OP2 4 1 Y 1 B DT 7 ? N1 ? D DT 7 N1 5 1 Y 1 B DT 7 ? C2 ? D DT 7 C2 6 1 Y 1 B DT 7 ? O2 ? D DT 7 O2 7 1 Y 1 B DT 7 ? N3 ? D DT 7 N3 8 1 Y 1 B DT 7 ? C4 ? D DT 7 C4 9 1 Y 1 B DT 7 ? O4 ? D DT 7 O4 10 1 Y 1 B DT 7 ? C5 ? D DT 7 C5 11 1 Y 1 B DT 7 ? C7 ? D DT 7 C7 12 1 Y 1 B DT 7 ? C6 ? D DT 7 C6 13 1 N 1 A JL0 101 ? C20 ? H JL0 1 C20 14 1 N 1 A JL0 101 ? C21 ? H JL0 1 C21 15 1 N 1 A JL0 101 ? O9 ? H JL0 1 O9 16 1 N 1 A JL0 101 ? P3 ? H JL0 1 P3 17 1 N 1 A JL0 101 ? O21 ? H JL0 1 O21 18 1 N 1 A JL0 101 ? O20 ? H JL0 1 O20 19 1 N 1 A JL0 101 ? O13 ? H JL0 1 O13 20 1 N 1 A JL0 101 ? C23 ? H JL0 1 C23 21 1 N 1 A JL0 101 ? C24 ? H JL0 1 C24 22 1 N 1 A JL0 101 ? C44 ? H JL0 1 C44 23 1 N 1 A JL0 101 ? O19 ? H JL0 1 O19 24 1 N 1 B JL0 101 ? O9 ? K JL0 1 O9 25 1 N 1 B JL0 101 ? P3 ? K JL0 1 P3 26 1 N 1 B JL0 101 ? O21 ? K JL0 1 O21 27 1 N 1 B JL0 101 ? O20 ? K JL0 1 O20 28 1 N 1 B JL0 101 ? O13 ? K JL0 1 O13 29 1 N 1 B JL0 101 ? C23 ? K JL0 1 C23 30 1 N 1 B JL0 101 ? C24 ? K JL0 1 C24 31 1 N 1 B JL0 101 ? C44 ? K JL0 1 C44 32 1 N 1 B JL0 101 ? O19 ? K JL0 1 O19 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data processing' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . 1 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0267 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 4 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 5 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 6 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 7ZKM _cell.details ? _cell.formula_units_Z ? _cell.length_a 76.600 _cell.length_a_esd ? _cell.length_b 76.600 _cell.length_b_esd ? _cell.length_c 129.380 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ZKM _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7ZKM _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.20 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.6 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEG 4000 20% w/v, 2-propanol 20% v/v, trisodium citrate 0.1 M, pH 5.6' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-12-05 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ELETTRA BEAMLINE 11.2C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0000 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 11.2C _diffrn_source.pdbx_synchrotron_site ELETTRA # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7ZKM _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.00 _reflns.d_resolution_low 59.10 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 30224 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 18.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 23.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.0 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.04 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1486 _reflns_shell.percent_possible_all 100.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.8 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] 0.1900 _refine.aniso_B[1][2] 0.0900 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 0.1900 _refine.aniso_B[2][3] -0.0000 _refine.aniso_B[3][3] -0.6100 _refine.B_iso_max 167.900 _refine.B_iso_mean 62.6610 _refine.B_iso_min 28.590 _refine.correlation_coeff_Fo_to_Fc 0.9550 _refine.correlation_coeff_Fo_to_Fc_free 0.9420 _refine.details 'U VALUES : WITH TLS ADDED' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7ZKM _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.00 _refine.ls_d_res_low 59.10 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 28692 _refine.ls_number_reflns_R_free 1532 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.8200 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2275 _refine.ls_R_factor_R_free 0.2523 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2262 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1PPB _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.2020 _refine.pdbx_overall_ESU_R_Free 0.1700 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 13.0260 _refine.overall_SU_ML 0.1570 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 59.10 _refine_hist.number_atoms_solvent 44 _refine_hist.number_atoms_total 3115 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 304 _refine_hist.pdbx_B_iso_mean_ligand 93.60 _refine_hist.pdbx_B_iso_mean_solvent 53.47 _refine_hist.pdbx_number_atoms_protein 2250 _refine_hist.pdbx_number_atoms_nucleic_acid 562 _refine_hist.pdbx_number_atoms_ligand 259 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 0.012 3228 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 1.531 1.697 4506 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 7.251 5.000 276 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 32.301 21.231 130 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 17.141 15.000 419 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 17.964 15.000 20 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.117 0.200 403 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 0.020 2226 ? r_gen_planes_refined ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.0020 _refine_ls_shell.d_res_low 2.0540 _refine_ls_shell.number_reflns_all 2188 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 95 _refine_ls_shell.number_reflns_R_work 2093 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3260 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.3120 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 7ZKM _struct.title ;X-ray structure of the complex between human alpha thrombin and a pseudo-cyclic thrombin binding aptamer (TBA-NNp/DDp) - Crystal form beta ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7ZKM _struct_keywords.text 'Thrombin, Aptamer, Complex, Inhibitor, Coagulation, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 7 ? I N N 8 ? J N N 9 ? K N N 7 ? L N N 8 ? M N N 9 ? N N N 10 ? O N N 10 ? P N N 10 ? Q N N 10 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP THRB_HUMAN P00734 ? 1 TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR 328 2 UNP THRB_HUMAN P00734 ? 2 ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; 364 3 PDB 7ZKM 7ZKM ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7ZKM L 1 ? 36 ? P00734 328 ? 363 ? -5 17 2 2 7ZKM H 1 ? 259 ? P00734 364 ? 622 ? 16 247 3 3 7ZKM A 1 ? 15 ? 7ZKM 1 ? 15 ? 1 15 4 3 7ZKM B 1 ? 15 ? 7ZKM 1 ? 15 ? 1 15 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5180 ? 1 MORE -26 ? 1 'SSA (A^2)' 17530 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PHE A 15 ? SER A 19 ? PHE L 7 SER L 11 5 ? 5 HELX_P HELX_P2 AA2 THR A 24 B TYR A 32 J THR L 14 TYR L 14 1 ? 9 HELX_P HELX_P3 AA3 ALA B 41 ? CYS B 44 ? ALA H 55 CYS H 58 5 ? 4 HELX_P HELX_P4 AA4 PRO B 48 B ASP B 51 E PRO H 60 ASP H 60 5 ? 4 HELX_P HELX_P5 AA5 THR B 55 I ASN B 57 ? THR H 60 ASN H 62 5 ? 3 HELX_P HELX_P6 AA6 ASP B 122 ? LEU B 130 ? ASP H 125 LEU H 130 1 ? 9 HELX_P HELX_P7 AA7 GLU B 169 ? SER B 176 ? GLU H 164 SER H 171 1 ? 8 HELX_P HELX_P8 AA8 LYS B 191 ? GLY B 195 C LYS H 185 GLY H 186 5 ? 5 HELX_P HELX_P9 AA9 LEU B 246 ? GLY B 258 ? LEU H 234 GLY H 246 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 B CYS 119 SG ? ? L CYS 1 H CYS 122 1_555 ? ? ? ? ? ? ? 2.094 ? ? disulf2 disulf ? ? B CYS 28 SG ? ? ? 1_555 B CYS 44 SG ? ? H CYS 42 H CYS 58 1_555 ? ? ? ? ? ? ? 2.068 ? ? disulf3 disulf ? ? B CYS 173 SG ? ? ? 1_555 B CYS 187 SG ? ? H CYS 168 H CYS 182 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf4 disulf ? ? B CYS 201 SG ? ? ? 1_555 B CYS 231 SG ? ? H CYS 191 H CYS 220 1_555 ? ? ? ? ? ? ? 2.060 ? ? covale1 covale one ? B HIS 43 NE2 ? ? ? 1_555 F 0G6 . C3 ? ? H HIS 57 H 0G6 301 1_555 ? ? ? ? ? ? ? 1.498 ? ? covale2 covale one ? B ASN 53 ND2 ? G ? 1_555 E NAG . C1 ? ? H ASN 60 C NAG 1 1_555 ? ? ? ? ? ? ? 1.449 ? N-Glycosylation covale3 covale none ? B SER 205 OG ? ? ? 1_555 F 0G6 . C2 ? ? H SER 195 H 0G6 301 1_555 ? ? ? ? ? ? ? 1.415 ? ? covale4 covale one ? C DG 1 P ? ? ? 1_555 H JL0 . O18 ? ? A DG 1 A JL0 101 1_555 ? ? ? ? ? ? ? 1.630 ? ? covale5 covale one ? C DG 15 "O3'" ? ? ? 1_555 I JKR . P1 ? ? A DG 15 A JKR 102 1_555 ? ? ? ? ? ? ? 1.619 ? ? covale6 covale one ? D DG 1 P ? ? ? 1_555 K JL0 . O18 ? ? B DG 1 B JL0 101 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale7 covale one ? D DG 15 "O3'" ? ? ? 1_555 L JKR . P1 ? ? B DG 15 B JKR 102 1_555 ? ? ? ? ? ? ? 1.638 ? ? covale8 covale both ? E NAG . O4 ? ? ? 1_555 E NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.454 ? ? metalc1 metalc ? ? B ARG 233 O ? ? ? 1_555 G NA . NA ? ? H ARG 221 H NA 302 1_555 ? ? ? ? ? ? ? 2.208 ? ? metalc2 metalc ? ? B LYS 236 O ? ? ? 1_555 G NA . NA ? ? H LYS 224 H NA 302 1_555 ? ? ? ? ? ? ? 2.380 ? ? metalc3 metalc ? ? G NA . NA ? ? ? 1_555 O HOH . O ? ? H NA 302 H HOH 406 1_555 ? ? ? ? ? ? ? 2.549 ? ? metalc4 metalc ? ? G NA . NA ? ? ? 1_555 O HOH . O ? ? H NA 302 H HOH 421 1_555 ? ? ? ? ? ? ? 2.433 ? ? metalc5 metalc ? ? G NA . NA ? ? ? 1_555 O HOH . O ? ? H NA 302 H HOH 422 1_555 ? ? ? ? ? ? ? 2.700 ? ? metalc6 metalc ? ? G NA . NA ? ? ? 1_555 O HOH . O ? ? H NA 302 H HOH 426 1_555 ? ? ? ? ? ? ? 2.585 ? ? metalc7 metalc ? ? C DG 1 O6 ? ? ? 1_555 J K . K ? ? A DG 1 A K 103 1_555 ? ? ? ? ? ? ? 3.046 ? ? metalc8 metalc ? ? C DG 2 O6 ? ? ? 1_555 J K . K ? ? A DG 2 A K 103 1_555 ? ? ? ? ? ? ? 2.997 ? ? metalc9 metalc ? ? C DG 5 O6 ? ? ? 1_555 J K . K ? ? A DG 5 A K 103 1_555 ? ? ? ? ? ? ? 2.806 ? ? metalc10 metalc ? ? C DG 11 O6 ? ? ? 1_555 J K . K ? ? A DG 11 A K 103 1_555 ? ? ? ? ? ? ? 2.884 ? ? metalc11 metalc ? ? C DG 14 O6 ? ? ? 1_555 J K . K ? ? A DG 14 A K 103 1_555 ? ? ? ? ? ? ? 2.831 ? ? metalc12 metalc ? ? C DG 15 O6 ? ? ? 1_555 J K . K ? ? A DG 15 A K 103 1_555 ? ? ? ? ? ? ? 2.826 ? ? metalc13 metalc ? ? D DG 1 O6 ? ? ? 1_555 M K . K ? ? B DG 1 B K 103 1_555 ? ? ? ? ? ? ? 2.853 ? ? metalc14 metalc ? ? D DG 2 O6 ? ? ? 1_555 M K . K ? ? B DG 2 B K 103 1_555 ? ? ? ? ? ? ? 2.982 ? ? metalc15 metalc ? ? D DG 5 O6 ? ? ? 1_555 M K . K ? ? B DG 5 B K 103 1_555 ? ? ? ? ? ? ? 2.861 ? ? metalc16 metalc ? ? D DG 6 O6 ? ? ? 1_555 M K . K ? ? B DG 6 B K 103 1_555 ? ? ? ? ? ? ? 2.863 ? ? metalc17 metalc ? ? D DG 10 O6 ? ? ? 1_555 M K . K ? ? B DG 10 B K 103 1_555 ? ? ? ? ? ? ? 2.799 ? ? metalc18 metalc ? ? D DG 11 O6 ? ? ? 1_555 M K . K ? ? B DG 11 B K 103 1_555 ? ? ? ? ? ? ? 2.871 ? ? metalc19 metalc ? ? D DG 14 O6 ? ? ? 1_555 M K . K ? ? B DG 14 B K 103 1_555 ? ? ? ? ? ? ? 2.688 ? ? metalc20 metalc ? ? D DG 15 O6 ? ? ? 1_555 M K . K ? ? B DG 15 B K 103 1_555 ? ? ? ? ? ? ? 2.764 ? ? hydrog1 hydrog ? ? C DG 1 N1 ? ? ? 1_555 C DG 6 O6 ? ? A DG 1 A DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? C DG 1 N2 ? ? ? 1_555 C DG 6 N7 ? ? A DG 1 A DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? C DG 1 N7 ? ? ? 1_555 C DG 15 N2 ? ? A DG 1 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? C DG 1 O6 ? ? ? 1_555 C DG 15 N1 ? ? A DG 1 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? C DG 2 N7 ? ? ? 1_555 C DG 5 N2 ? ? A DG 2 A DG 5 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? C DG 2 O6 ? ? ? 1_555 C DG 5 N1 ? ? A DG 2 A DG 5 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? C DG 2 N1 ? ? ? 1_555 C DG 14 O6 ? ? A DG 2 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? C DG 2 N2 ? ? ? 1_555 C DG 14 N7 ? ? A DG 2 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? C DG 5 N7 ? ? ? 1_555 C DG 11 N2 ? ? A DG 5 A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? C DG 5 O6 ? ? ? 1_555 C DG 11 N1 ? ? A DG 5 A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? C DG 6 N1 ? ? ? 1_555 C DG 10 O6 ? ? A DG 6 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? C DG 6 N2 ? ? ? 1_555 C DG 10 N7 ? ? A DG 6 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? C DG 10 N1 ? ? ? 1_555 C DG 15 O6 ? ? A DG 10 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? C DG 10 N2 ? ? ? 1_555 C DG 15 N7 ? ? A DG 10 A DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? C DG 11 N7 ? ? ? 1_555 C DG 14 N2 ? ? A DG 11 A DG 14 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? hydrog16 hydrog ? ? D DG 1 N1 ? ? ? 1_555 D DG 6 O6 ? ? B DG 1 B DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? D DG 1 N2 ? ? ? 1_555 D DG 6 N7 ? ? B DG 1 B DG 6 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? D DG 1 N7 ? ? ? 1_555 D DG 15 N2 ? ? B DG 1 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? D DG 1 O6 ? ? ? 1_555 D DG 15 N1 ? ? B DG 1 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? D DG 2 N7 ? ? ? 1_555 D DG 5 N2 ? ? B DG 2 B DG 5 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? D DG 2 O6 ? ? ? 1_555 D DG 5 N1 ? ? B DG 2 B DG 5 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? D DG 2 N1 ? ? ? 1_555 D DG 14 O6 ? ? B DG 2 B DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? D DG 2 N2 ? ? ? 1_555 D DG 14 N7 ? ? B DG 2 B DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? D DG 5 N7 ? ? ? 1_555 D DG 11 N2 ? ? B DG 5 B DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? D DG 5 O6 ? ? ? 1_555 D DG 11 N1 ? ? B DG 5 B DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? D DG 6 N1 ? ? ? 1_555 D DG 10 O6 ? ? B DG 6 B DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? D DG 6 N2 ? ? ? 1_555 D DG 10 N7 ? ? B DG 6 B DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? D DG 10 N1 ? ? ? 1_555 D DG 15 O6 ? ? B DG 10 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? D DG 10 N2 ? ? ? 1_555 D DG 15 N7 ? ? B DG 10 B DG 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog30 hydrog ? ? D DG 11 N7 ? ? ? 1_555 D DG 14 N2 ? ? B DG 11 B DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog31 hydrog ? ? D DG 11 O6 ? ? ? 1_555 D DG 14 N1 ? ? B DG 11 B DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? B ARG 233 ? H ARG 221 ? 1_555 NA ? G NA . ? H NA 302 ? 1_555 O ? B LYS 236 ? H LYS 224 ? 1_555 92.7 ? 2 O ? B ARG 233 ? H ARG 221 ? 1_555 NA ? G NA . ? H NA 302 ? 1_555 O ? O HOH . ? H HOH 406 ? 1_555 108.7 ? 3 O ? B LYS 236 ? H LYS 224 ? 1_555 NA ? G NA . ? H NA 302 ? 1_555 O ? O HOH . ? H HOH 406 ? 1_555 154.3 ? 4 O ? B ARG 233 ? H ARG 221 ? 1_555 NA ? G NA . ? H NA 302 ? 1_555 O ? O HOH . ? H HOH 421 ? 1_555 94.4 ? 5 O ? B LYS 236 ? H LYS 224 ? 1_555 NA ? G NA . ? H NA 302 ? 1_555 O ? O HOH . ? H HOH 421 ? 1_555 70.1 ? 6 O ? O HOH . ? H HOH 406 ? 1_555 NA ? G NA . ? H NA 302 ? 1_555 O ? O HOH . ? H HOH 421 ? 1_555 93.6 ? 7 O ? B ARG 233 ? H ARG 221 ? 1_555 NA ? G NA . ? H NA 302 ? 1_555 O ? O HOH . ? H HOH 422 ? 1_555 94.7 ? 8 O ? B LYS 236 ? H LYS 224 ? 1_555 NA ? G NA . ? H NA 302 ? 1_555 O ? O HOH . ? H HOH 422 ? 1_555 99.0 ? 9 O ? O HOH . ? H HOH 406 ? 1_555 NA ? G NA . ? H NA 302 ? 1_555 O ? O HOH . ? H HOH 422 ? 1_555 93.4 ? 10 O ? O HOH . ? H HOH 421 ? 1_555 NA ? G NA . ? H NA 302 ? 1_555 O ? O HOH . ? H HOH 422 ? 1_555 166.1 ? 11 O ? B ARG 233 ? H ARG 221 ? 1_555 NA ? G NA . ? H NA 302 ? 1_555 O ? O HOH . ? H HOH 426 ? 1_555 162.2 ? 12 O ? B LYS 236 ? H LYS 224 ? 1_555 NA ? G NA . ? H NA 302 ? 1_555 O ? O HOH . ? H HOH 426 ? 1_555 70.8 ? 13 O ? O HOH . ? H HOH 406 ? 1_555 NA ? G NA . ? H NA 302 ? 1_555 O ? O HOH . ? H HOH 426 ? 1_555 89.0 ? 14 O ? O HOH . ? H HOH 421 ? 1_555 NA ? G NA . ? H NA 302 ? 1_555 O ? O HOH . ? H HOH 426 ? 1_555 86.4 ? 15 O ? O HOH . ? H HOH 422 ? 1_555 NA ? G NA . ? H NA 302 ? 1_555 O ? O HOH . ? H HOH 426 ? 1_555 81.7 ? 16 O6 ? C DG 1 ? A DG 1 ? 1_555 K ? J K . ? A K 103 ? 1_555 O6 ? C DG 2 ? A DG 2 ? 1_555 70.3 ? 17 O6 ? C DG 1 ? A DG 1 ? 1_555 K ? J K . ? A K 103 ? 1_555 O6 ? C DG 5 ? A DG 5 ? 1_555 125.1 ? 18 O6 ? C DG 2 ? A DG 2 ? 1_555 K ? J K . ? A K 103 ? 1_555 O6 ? C DG 5 ? A DG 5 ? 1_555 75.3 ? 19 O6 ? C DG 1 ? A DG 1 ? 1_555 K ? J K . ? A K 103 ? 1_555 O6 ? C DG 11 ? A DG 11 ? 1_555 169.4 ? 20 O6 ? C DG 2 ? A DG 2 ? 1_555 K ? J K . ? A K 103 ? 1_555 O6 ? C DG 11 ? A DG 11 ? 1_555 118.0 ? 21 O6 ? C DG 5 ? A DG 5 ? 1_555 K ? J K . ? A K 103 ? 1_555 O6 ? C DG 11 ? A DG 11 ? 1_555 55.3 ? 22 O6 ? C DG 1 ? A DG 1 ? 1_555 K ? J K . ? A K 103 ? 1_555 O6 ? C DG 14 ? A DG 14 ? 1_555 109.1 ? 23 O6 ? C DG 2 ? A DG 2 ? 1_555 K ? J K . ? A K 103 ? 1_555 O6 ? C DG 14 ? A DG 14 ? 1_555 102.1 ? 24 O6 ? C DG 5 ? A DG 5 ? 1_555 K ? J K . ? A K 103 ? 1_555 O6 ? C DG 14 ? A DG 14 ? 1_555 119.1 ? 25 O6 ? C DG 11 ? A DG 11 ? 1_555 K ? J K . ? A K 103 ? 1_555 O6 ? C DG 14 ? A DG 14 ? 1_555 76.4 ? 26 O6 ? C DG 1 ? A DG 1 ? 1_555 K ? J K . ? A K 103 ? 1_555 O6 ? C DG 15 ? A DG 15 ? 1_555 75.6 ? 27 O6 ? C DG 2 ? A DG 2 ? 1_555 K ? J K . ? A K 103 ? 1_555 O6 ? C DG 15 ? A DG 15 ? 1_555 135.5 ? 28 O6 ? C DG 5 ? A DG 5 ? 1_555 K ? J K . ? A K 103 ? 1_555 O6 ? C DG 15 ? A DG 15 ? 1_555 149.1 ? 29 O6 ? C DG 11 ? A DG 11 ? 1_555 K ? J K . ? A K 103 ? 1_555 O6 ? C DG 15 ? A DG 15 ? 1_555 99.9 ? 30 O6 ? C DG 14 ? A DG 14 ? 1_555 K ? J K . ? A K 103 ? 1_555 O6 ? C DG 15 ? A DG 15 ? 1_555 63.4 ? 31 O6 ? D DG 1 ? B DG 1 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 2 ? B DG 2 ? 1_555 62.9 ? 32 O6 ? D DG 1 ? B DG 1 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 5 ? B DG 5 ? 1_555 119.4 ? 33 O6 ? D DG 2 ? B DG 2 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 5 ? B DG 5 ? 1_555 68.6 ? 34 O6 ? D DG 1 ? B DG 1 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 6 ? B DG 6 ? 1_555 71.4 ? 35 O6 ? D DG 2 ? B DG 2 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 6 ? B DG 6 ? 1_555 87.0 ? 36 O6 ? D DG 5 ? B DG 5 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 6 ? B DG 6 ? 1_555 72.0 ? 37 O6 ? D DG 1 ? B DG 1 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 10 ? B DG 10 ? 1_555 115.5 ? 38 O6 ? D DG 2 ? B DG 2 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 10 ? B DG 10 ? 1_555 160.2 ? 39 O6 ? D DG 5 ? B DG 5 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 10 ? B DG 10 ? 1_555 98.6 ? 40 O6 ? D DG 6 ? B DG 6 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 10 ? B DG 10 ? 1_555 74.4 ? 41 O6 ? D DG 1 ? B DG 1 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 11 ? B DG 11 ? 1_555 166.9 ? 42 O6 ? D DG 2 ? B DG 2 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 11 ? B DG 11 ? 1_555 120.1 ? 43 O6 ? D DG 5 ? B DG 5 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 11 ? B DG 11 ? 1_555 71.8 ? 44 O6 ? D DG 6 ? B DG 6 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 11 ? B DG 11 ? 1_555 120.6 ? 45 O6 ? D DG 10 ? B DG 10 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 11 ? B DG 11 ? 1_555 66.5 ? 46 O6 ? D DG 1 ? B DG 1 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 14 ? B DG 14 ? 1_555 94.3 ? 47 O6 ? D DG 2 ? B DG 2 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 14 ? B DG 14 ? 1_555 74.6 ? 48 O6 ? D DG 5 ? B DG 5 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 14 ? B DG 14 ? 1_555 105.8 ? 49 O6 ? D DG 6 ? B DG 6 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 14 ? B DG 14 ? 1_555 160.6 ? 50 O6 ? D DG 10 ? B DG 10 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 14 ? B DG 14 ? 1_555 124.6 ? 51 O6 ? D DG 11 ? B DG 11 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 14 ? B DG 14 ? 1_555 75.2 ? 52 O6 ? D DG 1 ? B DG 1 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 15 ? B DG 15 ? 1_555 65.0 ? 53 O6 ? D DG 2 ? B DG 2 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 15 ? B DG 15 ? 1_555 114.3 ? 54 O6 ? D DG 5 ? B DG 5 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 15 ? B DG 15 ? 1_555 175.6 ? 55 O6 ? D DG 6 ? B DG 6 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 15 ? B DG 15 ? 1_555 111.1 ? 56 O6 ? D DG 10 ? B DG 10 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 15 ? B DG 15 ? 1_555 79.5 ? 57 O6 ? D DG 11 ? B DG 11 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 15 ? B DG 15 ? 1_555 103.8 ? 58 O6 ? D DG 14 ? B DG 14 ? 1_555 K ? M K . ? B K 103 ? 1_555 O6 ? D DG 15 ? B DG 15 ? 1_555 72.4 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 22 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code A _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 36 _struct_mon_prot_cis.auth_asym_id H _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 23 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 37 _struct_mon_prot_cis.pdbx_auth_asym_id_2 H _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -4.84 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 7 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER B 5 ? ASP B 6 ? SER H 20 ASP H 21 AA1 2 GLN B 161 ? PRO B 166 ? GLN H 156 PRO H 161 AA1 3 LYS B 135 ? GLY B 140 ? LYS H 135 GLY H 140 AA1 4 PRO B 208 ? LYS B 212 ? PRO H 198 LYS H 202 AA1 5 TRP B 219 ? TRP B 227 ? TRP H 207 TRP H 215 AA1 6 GLY B 238 ? HIS B 242 ? GLY H 226 HIS H 230 AA1 7 MET B 185 ? ALA B 188 ? MET H 180 ALA H 183 AA2 1 GLN B 15 ? ARG B 20 ? GLN H 30 ARG H 35 AA2 2 GLU B 25 ? LEU B 32 ? GLU H 39 LEU H 46 AA2 3 TRP B 37 ? THR B 40 ? TRP H 51 THR H 54 AA2 4 ALA B 101 ? LEU B 105 ? ALA H 104 LEU H 108 AA2 5 LYS B 77 ? ILE B 86 ? LYS H 81 ILE H 90 AA2 6 LEU B 59 ? ILE B 63 ? LEU H 64 ILE H 68 AA2 7 GLN B 15 ? ARG B 20 ? GLN H 30 ARG H 35 AA3 1 LEU B 46 ? TYR B 47 A LEU H 60 TYR H 60 AA3 2 LYS B 52 F ASN B 53 G LYS H 60 ASN H 60 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N SER B 5 ? N SER H 20 O VAL B 162 ? O VAL H 157 AA1 2 3 O GLN B 161 ? O GLN H 156 N GLY B 140 ? N GLY H 140 AA1 3 4 N ARG B 137 ? N ARG H 137 O VAL B 210 ? O VAL H 200 AA1 4 5 N MET B 211 ? N MET H 201 O TYR B 220 ? O TYR H 208 AA1 5 6 N TRP B 227 ? N TRP H 215 O PHE B 239 ? O PHE H 227 AA1 6 7 O TYR B 240 ? O TYR H 228 N PHE B 186 ? N PHE H 181 AA2 1 2 N ARG B 20 ? N ARG H 35 O GLU B 25 ? O GLU H 39 AA2 2 3 N SER B 31 ? N SER H 45 O LEU B 39 ? O LEU H 53 AA2 3 4 N VAL B 38 ? N VAL H 52 O MET B 103 ? O MET H 106 AA2 4 5 O LYS B 104 ? O LYS H 107 N GLU B 82 ? N GLU H 86 AA2 5 6 O LYS B 77 ? O LYS H 81 N ILE B 63 ? N ILE H 68 AA2 6 7 O LEU B 60 ? O LEU H 65 N PHE B 19 ? N PHE H 34 AA3 1 2 N TYR B 47 A N TYR H 60 O LYS B 52 F O LYS H 60 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DT 3 ? ? 111.00 119.70 -8.70 1.20 Y 2 1 "O4'" A DG 11 ? ? "C1'" A DG 11 ? ? N9 A DG 11 ? ? 111.09 108.30 2.79 0.30 N 3 1 "O4'" A DG 15 ? ? "C1'" A DG 15 ? ? N9 A DG 15 ? ? 110.91 108.30 2.61 0.30 N 4 1 "O4'" B DG 6 ? ? "C1'" B DG 6 ? ? N9 B DG 6 ? ? 110.34 108.30 2.04 0.30 N 5 1 "C3'" B DG 8 ? ? "O3'" B DG 8 ? ? P B DT 9 ? ? 109.44 119.70 -10.26 1.20 Y 6 1 "O4'" B DT 9 ? ? "C1'" B DT 9 ? ? N1 B DT 9 ? ? 110.47 108.30 2.17 0.30 N 7 1 "C3'" B DG 11 ? ? "O3'" B DG 11 ? ? P B DT 12 ? ? 109.99 119.70 -9.71 1.20 Y 8 1 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 111.14 108.30 2.84 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE L 7 ? ? -117.17 -85.67 2 1 GLU H 39 ? ? -174.64 146.59 3 1 ASN H 60 G ? -161.68 93.13 4 1 HIS H 71 ? ? -130.70 -59.72 5 1 ARG H 77 A ? -35.92 126.02 6 1 GLU H 97 A ? -104.15 -74.27 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -31.3183 24.3474 -23.3390 0.0332 ? 0.0314 ? 0.0789 ? 0.2753 ? 0.0320 ? 0.3807 ? 4.2154 ? -0.7003 ? 0.4592 ? 6.1753 ? -1.1279 ? 5.4304 ? -0.2282 ? -0.3252 ? -0.3754 ? 0.1730 ? 0.3046 ? 0.9982 ? 0.1470 ? -0.5850 ? -0.0764 ? 2 'X-RAY DIFFRACTION' ? refined -11.8289 23.7664 -22.2416 0.0352 ? 0.0185 ? 0.0104 ? 0.0321 ? -0.0192 ? 0.0347 ? 3.4202 ? -0.7893 ? 0.7623 ? 4.0772 ? -0.6463 ? 2.2713 ? -0.2046 ? -0.1661 ? 0.0439 ? 0.2216 ? 0.1063 ? -0.0128 ? 0.0270 ? -0.0282 ? 0.0984 ? 3 'X-RAY DIFFRACTION' ? refined -23.9054 25.1648 7.6331 0.6820 ? 0.0997 ? 0.1344 ? 0.5542 ? -0.0039 ? 0.3668 ? 2.9108 ? 0.5152 ? -1.1311 ? 3.8586 ? 2.3283 ? 6.7745 ? -0.0785 ? -0.3791 ? 0.1661 ? 0.5385 ? -0.0219 ? -0.0763 ? -0.1892 ? -0.3630 ? 0.1004 ? 4 'X-RAY DIFFRACTION' ? refined 9.5641 10.0202 -36.6272 0.3124 ? 0.0895 ? 0.1036 ? 0.4482 ? -0.0686 ? 0.1901 ? 6.0619 ? 0.5467 ? -0.0759 ? 6.6670 ? 0.0384 ? 2.7539 ? -0.1788 ? 0.2853 ? 0.1593 ? -0.1952 ? 0.0699 ? -0.3769 ? -0.0331 ? 0.3907 ? 0.1089 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? L 7 ? ? ? L 103 ? ? ? 2 'X-RAY DIFFRACTION' 2 ? ? H 37 ? ? ? H 439 ? ? ? 3 'X-RAY DIFFRACTION' 3 ? ? A 1 ? ? ? A 201 ? ? ? 4 'X-RAY DIFFRACTION' 4 ? ? B 1 ? ? ? B 201 ? ? ? # _pdbx_entry_details.entry_id 7ZKM _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 L THR -5 ? A THR 1 2 1 Y 1 L PHE -4 ? A PHE 2 3 1 Y 1 L GLY -3 ? A GLY 3 4 1 Y 1 L SER -2 ? A SER 4 5 1 Y 1 L GLY -1 ? A GLY 5 6 1 Y 1 L GLU 0 ? A GLU 6 7 1 Y 1 L ASP 15 ? A ASP 34 8 1 Y 1 L GLY 16 ? A GLY 35 9 1 Y 1 L ARG 17 ? A ARG 36 10 1 Y 1 H THR 146 A B THR 147 11 1 Y 1 H TRP 146 B B TRP 148 12 1 Y 1 H THR 146 C B THR 149 13 1 Y 1 H ALA 146 D B ALA 150 14 1 Y 1 H ASN 146 E B ASN 151 15 1 Y 1 H VAL 146 F B VAL 152 16 1 Y 1 H GLY 146 G B GLY 153 17 1 Y 1 H LYS 146 H B LYS 154 18 1 Y 1 H GLY 146 I B GLY 155 19 1 Y 1 A DT 7 ? C DT 7 20 1 Y 1 A DG 8 ? C DG 8 21 1 Y 1 A DT 9 ? C DT 9 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0G6 N N N N 1 0G6 CA C N R 2 0G6 C C N N 3 0G6 O O N N 4 0G6 CB C N N 5 0G6 CG C Y N 6 0G6 CD1 C Y N 7 0G6 CD2 C Y N 8 0G6 CE1 C Y N 9 0G6 CE2 C Y N 10 0G6 CZ C Y N 11 0G6 N1 N N N 12 0G6 CA1 C N S 13 0G6 C1 C N N 14 0G6 O1 O N N 15 0G6 CB1 C N N 16 0G6 CG1 C N N 17 0G6 CD C N N 18 0G6 N2 N N N 19 0G6 CA2 C N S 20 0G6 C2 C N S 21 0G6 O2 O N N 22 0G6 CB2 C N N 23 0G6 CG2 C N N 24 0G6 CD3 C N N 25 0G6 NE N N N 26 0G6 CZ1 C N N 27 0G6 NH1 N N N 28 0G6 NH2 N N N 29 0G6 C3 C N N 30 0G6 CL CL N N 31 0G6 H H N N 32 0G6 H2 H N N 33 0G6 HA H N N 34 0G6 HB2 H N N 35 0G6 HB3 H N N 36 0G6 HD1 H N N 37 0G6 HD2 H N N 38 0G6 HE1 H N N 39 0G6 HE2 H N N 40 0G6 HZ H N N 41 0G6 HA1 H N N 42 0G6 HB21 H N N 43 0G6 HB31 H N N 44 0G6 HG2 H N N 45 0G6 HG3 H N N 46 0G6 HD21 H N N 47 0G6 HD3 H N N 48 0G6 H1 H N N 49 0G6 HA2 H N N 50 0G6 HB22 H N N 51 0G6 HB32 H N N 52 0G6 HG21 H N N 53 0G6 HG31 H N N 54 0G6 HD22 H N N 55 0G6 HD31 H N N 56 0G6 HE H N N 57 0G6 HH11 H N N 58 0G6 HH12 H N N 59 0G6 HH21 H N N 60 0G6 HH22 H N N 61 0G6 H11 H N N 62 0G6 H21 H N N 63 0G6 H33 H N N 64 0G6 H34 H N N 65 ALA N N N N 66 ALA CA C N S 67 ALA C C N N 68 ALA O O N N 69 ALA CB C N N 70 ALA OXT O N N 71 ALA H H N N 72 ALA H2 H N N 73 ALA HA H N N 74 ALA HB1 H N N 75 ALA HB2 H N N 76 ALA HB3 H N N 77 ALA HXT H N N 78 ARG N N N N 79 ARG CA C N S 80 ARG C C N N 81 ARG O O N N 82 ARG CB C N N 83 ARG CG C N N 84 ARG CD C N N 85 ARG NE N N N 86 ARG CZ C N N 87 ARG NH1 N N N 88 ARG NH2 N N N 89 ARG OXT O N N 90 ARG H H N N 91 ARG H2 H N N 92 ARG HA H N N 93 ARG HB2 H N N 94 ARG HB3 H N N 95 ARG HG2 H N N 96 ARG HG3 H N N 97 ARG HD2 H N N 98 ARG HD3 H N N 99 ARG HE H N N 100 ARG HH11 H N N 101 ARG HH12 H N N 102 ARG HH21 H N N 103 ARG HH22 H N N 104 ARG HXT H N N 105 ASN N N N N 106 ASN CA C N S 107 ASN C C N N 108 ASN O O N N 109 ASN CB C N N 110 ASN CG C N N 111 ASN OD1 O N N 112 ASN ND2 N N N 113 ASN OXT O N N 114 ASN H H N N 115 ASN H2 H N N 116 ASN HA H N N 117 ASN HB2 H N N 118 ASN HB3 H N N 119 ASN HD21 H N N 120 ASN HD22 H N N 121 ASN HXT H N N 122 ASP N N N N 123 ASP CA C N S 124 ASP C C N N 125 ASP O O N N 126 ASP CB C N N 127 ASP CG C N N 128 ASP OD1 O N N 129 ASP OD2 O N N 130 ASP OXT O N N 131 ASP H H N N 132 ASP H2 H N N 133 ASP HA H N N 134 ASP HB2 H N N 135 ASP HB3 H N N 136 ASP HD2 H N N 137 ASP HXT H N N 138 CYS N N N N 139 CYS CA C N R 140 CYS C C N N 141 CYS O O N N 142 CYS CB C N N 143 CYS SG S N N 144 CYS OXT O N N 145 CYS H H N N 146 CYS H2 H N N 147 CYS HA H N N 148 CYS HB2 H N N 149 CYS HB3 H N N 150 CYS HG H N N 151 CYS HXT H N N 152 DG OP3 O N N 153 DG P P N N 154 DG OP1 O N N 155 DG OP2 O N N 156 DG "O5'" O N N 157 DG "C5'" C N N 158 DG "C4'" C N R 159 DG "O4'" O N N 160 DG "C3'" C N S 161 DG "O3'" O N N 162 DG "C2'" C N N 163 DG "C1'" C N R 164 DG N9 N Y N 165 DG C8 C Y N 166 DG N7 N Y N 167 DG C5 C Y N 168 DG C6 C N N 169 DG O6 O N N 170 DG N1 N N N 171 DG C2 C N N 172 DG N2 N N N 173 DG N3 N N N 174 DG C4 C Y N 175 DG HOP3 H N N 176 DG HOP2 H N N 177 DG "H5'" H N N 178 DG "H5''" H N N 179 DG "H4'" H N N 180 DG "H3'" H N N 181 DG "HO3'" H N N 182 DG "H2'" H N N 183 DG "H2''" H N N 184 DG "H1'" H N N 185 DG H8 H N N 186 DG H1 H N N 187 DG H21 H N N 188 DG H22 H N N 189 DT OP3 O N N 190 DT P P N N 191 DT OP1 O N N 192 DT OP2 O N N 193 DT "O5'" O N N 194 DT "C5'" C N N 195 DT "C4'" C N R 196 DT "O4'" O N N 197 DT "C3'" C N S 198 DT "O3'" O N N 199 DT "C2'" C N N 200 DT "C1'" C N R 201 DT N1 N N N 202 DT C2 C N N 203 DT O2 O N N 204 DT N3 N N N 205 DT C4 C N N 206 DT O4 O N N 207 DT C5 C N N 208 DT C7 C N N 209 DT C6 C N N 210 DT HOP3 H N N 211 DT HOP2 H N N 212 DT "H5'" H N N 213 DT "H5''" H N N 214 DT "H4'" H N N 215 DT "H3'" H N N 216 DT "HO3'" H N N 217 DT "H2'" H N N 218 DT "H2''" H N N 219 DT "H1'" H N N 220 DT H3 H N N 221 DT H71 H N N 222 DT H72 H N N 223 DT H73 H N N 224 DT H6 H N N 225 GLN N N N N 226 GLN CA C N S 227 GLN C C N N 228 GLN O O N N 229 GLN CB C N N 230 GLN CG C N N 231 GLN CD C N N 232 GLN OE1 O N N 233 GLN NE2 N N N 234 GLN OXT O N N 235 GLN H H N N 236 GLN H2 H N N 237 GLN HA H N N 238 GLN HB2 H N N 239 GLN HB3 H N N 240 GLN HG2 H N N 241 GLN HG3 H N N 242 GLN HE21 H N N 243 GLN HE22 H N N 244 GLN HXT H N N 245 GLU N N N N 246 GLU CA C N S 247 GLU C C N N 248 GLU O O N N 249 GLU CB C N N 250 GLU CG C N N 251 GLU CD C N N 252 GLU OE1 O N N 253 GLU OE2 O N N 254 GLU OXT O N N 255 GLU H H N N 256 GLU H2 H N N 257 GLU HA H N N 258 GLU HB2 H N N 259 GLU HB3 H N N 260 GLU HG2 H N N 261 GLU HG3 H N N 262 GLU HE2 H N N 263 GLU HXT H N N 264 GLY N N N N 265 GLY CA C N N 266 GLY C C N N 267 GLY O O N N 268 GLY OXT O N N 269 GLY H H N N 270 GLY H2 H N N 271 GLY HA2 H N N 272 GLY HA3 H N N 273 GLY HXT H N N 274 HIS N N N N 275 HIS CA C N S 276 HIS C C N N 277 HIS O O N N 278 HIS CB C N N 279 HIS CG C Y N 280 HIS ND1 N Y N 281 HIS CD2 C Y N 282 HIS CE1 C Y N 283 HIS NE2 N Y N 284 HIS OXT O N N 285 HIS H H N N 286 HIS H2 H N N 287 HIS HA H N N 288 HIS HB2 H N N 289 HIS HB3 H N N 290 HIS HD1 H N N 291 HIS HD2 H N N 292 HIS HE1 H N N 293 HIS HE2 H N N 294 HIS HXT H N N 295 HOH O O N N 296 HOH H1 H N N 297 HOH H2 H N N 298 ILE N N N N 299 ILE CA C N S 300 ILE C C N N 301 ILE O O N N 302 ILE CB C N S 303 ILE CG1 C N N 304 ILE CG2 C N N 305 ILE CD1 C N N 306 ILE OXT O N N 307 ILE H H N N 308 ILE H2 H N N 309 ILE HA H N N 310 ILE HB H N N 311 ILE HG12 H N N 312 ILE HG13 H N N 313 ILE HG21 H N N 314 ILE HG22 H N N 315 ILE HG23 H N N 316 ILE HD11 H N N 317 ILE HD12 H N N 318 ILE HD13 H N N 319 ILE HXT H N N 320 JKR C8 C Y N 321 JKR C5 C Y N 322 JKR C6 C Y N 323 JKR C2 C N N 324 JKR C3 C N N 325 JKR C4 C Y N 326 JKR O1 O N N 327 JKR P1 P N N 328 JKR O2 O N N 329 JKR O4 O N N 330 JKR C1 C N N 331 JKR O5 O N N 332 JKR C7 C Y N 333 JKR C9 C Y N 334 JKR O6 O N N 335 JKR C10 C N N 336 JKR C11 C N N 337 JKR C12 C N N 338 JKR O7 O N N 339 JKR P2 P N N 340 JKR O8 O N N 341 JKR O9 O N N 342 JKR O10 O N N 343 JKR C13 C N N 344 JKR C14 C N N 345 JKR C15 C N N 346 JKR O11 O N N 347 JKR C16 C Y N 348 JKR C17 C Y N 349 JKR C18 C Y N 350 JKR C19 C Y N 351 JKR C20 C Y N 352 JKR C21 C Y N 353 JKR O12 O N N 354 JKR C28 C Y N 355 JKR C29 C Y N 356 JKR C30 C Y N 357 JKR C31 C Y N 358 JKR C32 C Y N 359 JKR C33 C Y N 360 JKR C34 C Y N 361 JKR C35 C Y N 362 JKR H1 H N N 363 JKR H2 H N N 364 JKR H3 H N N 365 JKR H4 H N N 366 JKR H5 H N N 367 JKR H6 H N N 368 JKR H7 H N N 369 JKR H8 H N N 370 JKR H9 H N N 371 JKR H10 H N N 372 JKR H11 H N N 373 JKR H12 H N N 374 JKR H13 H N N 375 JKR H14 H N N 376 JKR H15 H N N 377 JKR H16 H N N 378 JKR H17 H N N 379 JKR H18 H N N 380 JKR H19 H N N 381 JKR H20 H N N 382 JKR H21 H N N 383 JKR H22 H N N 384 JKR H23 H N N 385 JKR H24 H N N 386 JKR H25 H N N 387 JKR H26 H N N 388 JKR H27 H N N 389 JKR H28 H N N 390 JKR H29 H N N 391 JKR H30 H N N 392 JKR H31 H N N 393 JKR H32 H N N 394 JKR H33 H N N 395 JKR H34 H N N 396 JL0 O1 O N N 397 JL0 C1 C N N 398 JL0 C2 C Y N 399 JL0 C3 C Y N 400 JL0 C4 C Y N 401 JL0 C5 C Y N 402 JL0 C6 C N N 403 JL0 O2 O N N 404 JL0 N1 N N N 405 JL0 C7 C N N 406 JL0 C8 C N N 407 JL0 C9 C N N 408 JL0 O3 O N N 409 JL0 P1 P N N 410 JL0 O4 O N N 411 JL0 O5 O N N 412 JL0 O6 O N N 413 JL0 C10 C N N 414 JL0 C11 C N N 415 JL0 C12 C N N 416 JL0 N2 N N N 417 JL0 C13 C N N 418 JL0 O7 O N N 419 JL0 C14 C Y N 420 JL0 C15 C Y N 421 JL0 C16 C Y N 422 JL0 C17 C Y N 423 JL0 C18 C N N 424 JL0 O8 O N N 425 JL0 N3 N N N 426 JL0 C19 C N N 427 JL0 C25 C N N 428 JL0 O14 O N N 429 JL0 C26 C Y N 430 JL0 C27 C Y N 431 JL0 C28 C Y N 432 JL0 C29 C Y N 433 JL0 C30 C N N 434 JL0 O15 O N N 435 JL0 C31 C Y N 436 JL0 C32 C Y N 437 JL0 C33 C N N 438 JL0 O16 O N N 439 JL0 C34 C Y N 440 JL0 C35 C Y N 441 JL0 C36 C Y N 442 JL0 C37 C Y N 443 JL0 C38 C N N 444 JL0 O17 O N N 445 JL0 N4 N N N 446 JL0 C39 C N N 447 JL0 C40 C N N 448 JL0 C41 C N N 449 JL0 O18 O N N 450 JL0 C42 C Y N 451 JL0 C43 C Y N 452 JL0 H1 H N N 453 JL0 H2 H N N 454 JL0 H3 H N N 455 JL0 H4 H N N 456 JL0 H5 H N N 457 JL0 H6 H N N 458 JL0 H7 H N N 459 JL0 H8 H N N 460 JL0 H9 H N N 461 JL0 H10 H N N 462 JL0 H11 H N N 463 JL0 H12 H N N 464 JL0 H13 H N N 465 JL0 H14 H N N 466 JL0 H15 H N N 467 JL0 H16 H N N 468 JL0 H17 H N N 469 JL0 H18 H N N 470 JL0 H19 H N N 471 JL0 H21 H N N 472 JL0 H22 H N N 473 JL0 H23 H N N 474 JL0 H24 H N N 475 JL0 H25 H N N 476 JL0 H26 H N N 477 JL0 H27 H N N 478 JL0 H28 H N N 479 JL0 H29 H N N 480 JL0 H30 H N N 481 JL0 P2 P N N 482 JL0 O12 O N N 483 JL0 O11 O N N 484 JL0 O10 O N N 485 JL0 H31 H N N 486 JL0 H32 H N N 487 JL0 C20 C N N 488 JL0 C21 C N N 489 JL0 O9 O N N 490 JL0 P3 P N N 491 JL0 O21 O N N 492 JL0 O20 O N N 493 JL0 O13 O N N 494 JL0 C23 C N N 495 JL0 C24 C N N 496 JL0 C44 C N N 497 JL0 O19 O N N 498 JL0 H20 H N N 499 JL0 H33 H N N 500 JL0 H34 H N N 501 JL0 H35 H N N 502 JL0 H36 H N N 503 JL0 H37 H N N 504 JL0 H38 H N N 505 JL0 H39 H N N 506 JL0 H40 H N N 507 JL0 H41 H N N 508 JL0 H42 H N N 509 JL0 H43 H N N 510 K K K N N 511 LEU N N N N 512 LEU CA C N S 513 LEU C C N N 514 LEU O O N N 515 LEU CB C N N 516 LEU CG C N N 517 LEU CD1 C N N 518 LEU CD2 C N N 519 LEU OXT O N N 520 LEU H H N N 521 LEU H2 H N N 522 LEU HA H N N 523 LEU HB2 H N N 524 LEU HB3 H N N 525 LEU HG H N N 526 LEU HD11 H N N 527 LEU HD12 H N N 528 LEU HD13 H N N 529 LEU HD21 H N N 530 LEU HD22 H N N 531 LEU HD23 H N N 532 LEU HXT H N N 533 LYS N N N N 534 LYS CA C N S 535 LYS C C N N 536 LYS O O N N 537 LYS CB C N N 538 LYS CG C N N 539 LYS CD C N N 540 LYS CE C N N 541 LYS NZ N N N 542 LYS OXT O N N 543 LYS H H N N 544 LYS H2 H N N 545 LYS HA H N N 546 LYS HB2 H N N 547 LYS HB3 H N N 548 LYS HG2 H N N 549 LYS HG3 H N N 550 LYS HD2 H N N 551 LYS HD3 H N N 552 LYS HE2 H N N 553 LYS HE3 H N N 554 LYS HZ1 H N N 555 LYS HZ2 H N N 556 LYS HZ3 H N N 557 LYS HXT H N N 558 MET N N N N 559 MET CA C N S 560 MET C C N N 561 MET O O N N 562 MET CB C N N 563 MET CG C N N 564 MET SD S N N 565 MET CE C N N 566 MET OXT O N N 567 MET H H N N 568 MET H2 H N N 569 MET HA H N N 570 MET HB2 H N N 571 MET HB3 H N N 572 MET HG2 H N N 573 MET HG3 H N N 574 MET HE1 H N N 575 MET HE2 H N N 576 MET HE3 H N N 577 MET HXT H N N 578 NA NA NA N N 579 NAG C1 C N R 580 NAG C2 C N R 581 NAG C3 C N R 582 NAG C4 C N S 583 NAG C5 C N R 584 NAG C6 C N N 585 NAG C7 C N N 586 NAG C8 C N N 587 NAG N2 N N N 588 NAG O1 O N N 589 NAG O3 O N N 590 NAG O4 O N N 591 NAG O5 O N N 592 NAG O6 O N N 593 NAG O7 O N N 594 NAG H1 H N N 595 NAG H2 H N N 596 NAG H3 H N N 597 NAG H4 H N N 598 NAG H5 H N N 599 NAG H61 H N N 600 NAG H62 H N N 601 NAG H81 H N N 602 NAG H82 H N N 603 NAG H83 H N N 604 NAG HN2 H N N 605 NAG HO1 H N N 606 NAG HO3 H N N 607 NAG HO4 H N N 608 NAG HO6 H N N 609 PHE N N N N 610 PHE CA C N S 611 PHE C C N N 612 PHE O O N N 613 PHE CB C N N 614 PHE CG C Y N 615 PHE CD1 C Y N 616 PHE CD2 C Y N 617 PHE CE1 C Y N 618 PHE CE2 C Y N 619 PHE CZ C Y N 620 PHE OXT O N N 621 PHE H H N N 622 PHE H2 H N N 623 PHE HA H N N 624 PHE HB2 H N N 625 PHE HB3 H N N 626 PHE HD1 H N N 627 PHE HD2 H N N 628 PHE HE1 H N N 629 PHE HE2 H N N 630 PHE HZ H N N 631 PHE HXT H N N 632 PRO N N N N 633 PRO CA C N S 634 PRO C C N N 635 PRO O O N N 636 PRO CB C N N 637 PRO CG C N N 638 PRO CD C N N 639 PRO OXT O N N 640 PRO H H N N 641 PRO HA H N N 642 PRO HB2 H N N 643 PRO HB3 H N N 644 PRO HG2 H N N 645 PRO HG3 H N N 646 PRO HD2 H N N 647 PRO HD3 H N N 648 PRO HXT H N N 649 SER N N N N 650 SER CA C N S 651 SER C C N N 652 SER O O N N 653 SER CB C N N 654 SER OG O N N 655 SER OXT O N N 656 SER H H N N 657 SER H2 H N N 658 SER HA H N N 659 SER HB2 H N N 660 SER HB3 H N N 661 SER HG H N N 662 SER HXT H N N 663 THR N N N N 664 THR CA C N S 665 THR C C N N 666 THR O O N N 667 THR CB C N R 668 THR OG1 O N N 669 THR CG2 C N N 670 THR OXT O N N 671 THR H H N N 672 THR H2 H N N 673 THR HA H N N 674 THR HB H N N 675 THR HG1 H N N 676 THR HG21 H N N 677 THR HG22 H N N 678 THR HG23 H N N 679 THR HXT H N N 680 TRP N N N N 681 TRP CA C N S 682 TRP C C N N 683 TRP O O N N 684 TRP CB C N N 685 TRP CG C Y N 686 TRP CD1 C Y N 687 TRP CD2 C Y N 688 TRP NE1 N Y N 689 TRP CE2 C Y N 690 TRP CE3 C Y N 691 TRP CZ2 C Y N 692 TRP CZ3 C Y N 693 TRP CH2 C Y N 694 TRP OXT O N N 695 TRP H H N N 696 TRP H2 H N N 697 TRP HA H N N 698 TRP HB2 H N N 699 TRP HB3 H N N 700 TRP HD1 H N N 701 TRP HE1 H N N 702 TRP HE3 H N N 703 TRP HZ2 H N N 704 TRP HZ3 H N N 705 TRP HH2 H N N 706 TRP HXT H N N 707 TYR N N N N 708 TYR CA C N S 709 TYR C C N N 710 TYR O O N N 711 TYR CB C N N 712 TYR CG C Y N 713 TYR CD1 C Y N 714 TYR CD2 C Y N 715 TYR CE1 C Y N 716 TYR CE2 C Y N 717 TYR CZ C Y N 718 TYR OH O N N 719 TYR OXT O N N 720 TYR H H N N 721 TYR H2 H N N 722 TYR HA H N N 723 TYR HB2 H N N 724 TYR HB3 H N N 725 TYR HD1 H N N 726 TYR HD2 H N N 727 TYR HE1 H N N 728 TYR HE2 H N N 729 TYR HH H N N 730 TYR HXT H N N 731 VAL N N N N 732 VAL CA C N S 733 VAL C C N N 734 VAL O O N N 735 VAL CB C N N 736 VAL CG1 C N N 737 VAL CG2 C N N 738 VAL OXT O N N 739 VAL H H N N 740 VAL H2 H N N 741 VAL HA H N N 742 VAL HB H N N 743 VAL HG11 H N N 744 VAL HG12 H N N 745 VAL HG13 H N N 746 VAL HG21 H N N 747 VAL HG22 H N N 748 VAL HG23 H N N 749 VAL HXT H N N 750 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0G6 N CA sing N N 1 0G6 N H sing N N 2 0G6 N H2 sing N N 3 0G6 CA C sing N N 4 0G6 CA CB sing N N 5 0G6 CA HA sing N N 6 0G6 C O doub N N 7 0G6 C N1 sing N N 8 0G6 CB CG sing N N 9 0G6 CB HB2 sing N N 10 0G6 CB HB3 sing N N 11 0G6 CG CD1 doub Y N 12 0G6 CG CD2 sing Y N 13 0G6 CD1 CE1 sing Y N 14 0G6 CD1 HD1 sing N N 15 0G6 CD2 CE2 doub Y N 16 0G6 CD2 HD2 sing N N 17 0G6 CE1 CZ doub Y N 18 0G6 CE1 HE1 sing N N 19 0G6 CE2 CZ sing Y N 20 0G6 CE2 HE2 sing N N 21 0G6 CZ HZ sing N N 22 0G6 N1 CA1 sing N N 23 0G6 N1 CD sing N N 24 0G6 CA1 C1 sing N N 25 0G6 CA1 CB1 sing N N 26 0G6 CA1 HA1 sing N N 27 0G6 C1 O1 doub N N 28 0G6 C1 N2 sing N N 29 0G6 CB1 CG1 sing N N 30 0G6 CB1 HB21 sing N N 31 0G6 CB1 HB31 sing N N 32 0G6 CG1 CD sing N N 33 0G6 CG1 HG2 sing N N 34 0G6 CG1 HG3 sing N N 35 0G6 CD HD21 sing N N 36 0G6 CD HD3 sing N N 37 0G6 N2 CA2 sing N N 38 0G6 N2 H1 sing N N 39 0G6 CA2 C2 sing N N 40 0G6 CA2 CB2 sing N N 41 0G6 CA2 HA2 sing N N 42 0G6 C2 O2 sing N N 43 0G6 C2 C3 sing N N 44 0G6 CB2 CG2 sing N N 45 0G6 CB2 HB22 sing N N 46 0G6 CB2 HB32 sing N N 47 0G6 CG2 CD3 sing N N 48 0G6 CG2 HG21 sing N N 49 0G6 CG2 HG31 sing N N 50 0G6 CD3 NE sing N N 51 0G6 CD3 HD22 sing N N 52 0G6 CD3 HD31 sing N N 53 0G6 NE CZ1 sing N N 54 0G6 NE HE sing N N 55 0G6 CZ1 NH1 sing N N 56 0G6 CZ1 NH2 doub N N 57 0G6 NH1 HH11 sing N N 58 0G6 NH1 HH12 sing N N 59 0G6 NH2 HH21 sing N N 60 0G6 NH2 HH22 sing N N 61 0G6 C3 H11 sing N N 62 0G6 C3 H21 sing N N 63 0G6 CL C3 sing N N 64 0G6 C2 H33 sing N N 65 0G6 O2 H34 sing N N 66 ALA N CA sing N N 67 ALA N H sing N N 68 ALA N H2 sing N N 69 ALA CA C sing N N 70 ALA CA CB sing N N 71 ALA CA HA sing N N 72 ALA C O doub N N 73 ALA C OXT sing N N 74 ALA CB HB1 sing N N 75 ALA CB HB2 sing N N 76 ALA CB HB3 sing N N 77 ALA OXT HXT sing N N 78 ARG N CA sing N N 79 ARG N H sing N N 80 ARG N H2 sing N N 81 ARG CA C sing N N 82 ARG CA CB sing N N 83 ARG CA HA sing N N 84 ARG C O doub N N 85 ARG C OXT sing N N 86 ARG CB CG sing N N 87 ARG CB HB2 sing N N 88 ARG CB HB3 sing N N 89 ARG CG CD sing N N 90 ARG CG HG2 sing N N 91 ARG CG HG3 sing N N 92 ARG CD NE sing N N 93 ARG CD HD2 sing N N 94 ARG CD HD3 sing N N 95 ARG NE CZ sing N N 96 ARG NE HE sing N N 97 ARG CZ NH1 sing N N 98 ARG CZ NH2 doub N N 99 ARG NH1 HH11 sing N N 100 ARG NH1 HH12 sing N N 101 ARG NH2 HH21 sing N N 102 ARG NH2 HH22 sing N N 103 ARG OXT HXT sing N N 104 ASN N CA sing N N 105 ASN N H sing N N 106 ASN N H2 sing N N 107 ASN CA C sing N N 108 ASN CA CB sing N N 109 ASN CA HA sing N N 110 ASN C O doub N N 111 ASN C OXT sing N N 112 ASN CB CG sing N N 113 ASN CB HB2 sing N N 114 ASN CB HB3 sing N N 115 ASN CG OD1 doub N N 116 ASN CG ND2 sing N N 117 ASN ND2 HD21 sing N N 118 ASN ND2 HD22 sing N N 119 ASN OXT HXT sing N N 120 ASP N CA sing N N 121 ASP N H sing N N 122 ASP N H2 sing N N 123 ASP CA C sing N N 124 ASP CA CB sing N N 125 ASP CA HA sing N N 126 ASP C O doub N N 127 ASP C OXT sing N N 128 ASP CB CG sing N N 129 ASP CB HB2 sing N N 130 ASP CB HB3 sing N N 131 ASP CG OD1 doub N N 132 ASP CG OD2 sing N N 133 ASP OD2 HD2 sing N N 134 ASP OXT HXT sing N N 135 CYS N CA sing N N 136 CYS N H sing N N 137 CYS N H2 sing N N 138 CYS CA C sing N N 139 CYS CA CB sing N N 140 CYS CA HA sing N N 141 CYS C O doub N N 142 CYS C OXT sing N N 143 CYS CB SG sing N N 144 CYS CB HB2 sing N N 145 CYS CB HB3 sing N N 146 CYS SG HG sing N N 147 CYS OXT HXT sing N N 148 DG OP3 P sing N N 149 DG OP3 HOP3 sing N N 150 DG P OP1 doub N N 151 DG P OP2 sing N N 152 DG P "O5'" sing N N 153 DG OP2 HOP2 sing N N 154 DG "O5'" "C5'" sing N N 155 DG "C5'" "C4'" sing N N 156 DG "C5'" "H5'" sing N N 157 DG "C5'" "H5''" sing N N 158 DG "C4'" "O4'" sing N N 159 DG "C4'" "C3'" sing N N 160 DG "C4'" "H4'" sing N N 161 DG "O4'" "C1'" sing N N 162 DG "C3'" "O3'" sing N N 163 DG "C3'" "C2'" sing N N 164 DG "C3'" "H3'" sing N N 165 DG "O3'" "HO3'" sing N N 166 DG "C2'" "C1'" sing N N 167 DG "C2'" "H2'" sing N N 168 DG "C2'" "H2''" sing N N 169 DG "C1'" N9 sing N N 170 DG "C1'" "H1'" sing N N 171 DG N9 C8 sing Y N 172 DG N9 C4 sing Y N 173 DG C8 N7 doub Y N 174 DG C8 H8 sing N N 175 DG N7 C5 sing Y N 176 DG C5 C6 sing N N 177 DG C5 C4 doub Y N 178 DG C6 O6 doub N N 179 DG C6 N1 sing N N 180 DG N1 C2 sing N N 181 DG N1 H1 sing N N 182 DG C2 N2 sing N N 183 DG C2 N3 doub N N 184 DG N2 H21 sing N N 185 DG N2 H22 sing N N 186 DG N3 C4 sing N N 187 DT OP3 P sing N N 188 DT OP3 HOP3 sing N N 189 DT P OP1 doub N N 190 DT P OP2 sing N N 191 DT P "O5'" sing N N 192 DT OP2 HOP2 sing N N 193 DT "O5'" "C5'" sing N N 194 DT "C5'" "C4'" sing N N 195 DT "C5'" "H5'" sing N N 196 DT "C5'" "H5''" sing N N 197 DT "C4'" "O4'" sing N N 198 DT "C4'" "C3'" sing N N 199 DT "C4'" "H4'" sing N N 200 DT "O4'" "C1'" sing N N 201 DT "C3'" "O3'" sing N N 202 DT "C3'" "C2'" sing N N 203 DT "C3'" "H3'" sing N N 204 DT "O3'" "HO3'" sing N N 205 DT "C2'" "C1'" sing N N 206 DT "C2'" "H2'" sing N N 207 DT "C2'" "H2''" sing N N 208 DT "C1'" N1 sing N N 209 DT "C1'" "H1'" sing N N 210 DT N1 C2 sing N N 211 DT N1 C6 sing N N 212 DT C2 O2 doub N N 213 DT C2 N3 sing N N 214 DT N3 C4 sing N N 215 DT N3 H3 sing N N 216 DT C4 O4 doub N N 217 DT C4 C5 sing N N 218 DT C5 C7 sing N N 219 DT C5 C6 doub N N 220 DT C7 H71 sing N N 221 DT C7 H72 sing N N 222 DT C7 H73 sing N N 223 DT C6 H6 sing N N 224 GLN N CA sing N N 225 GLN N H sing N N 226 GLN N H2 sing N N 227 GLN CA C sing N N 228 GLN CA CB sing N N 229 GLN CA HA sing N N 230 GLN C O doub N N 231 GLN C OXT sing N N 232 GLN CB CG sing N N 233 GLN CB HB2 sing N N 234 GLN CB HB3 sing N N 235 GLN CG CD sing N N 236 GLN CG HG2 sing N N 237 GLN CG HG3 sing N N 238 GLN CD OE1 doub N N 239 GLN CD NE2 sing N N 240 GLN NE2 HE21 sing N N 241 GLN NE2 HE22 sing N N 242 GLN OXT HXT sing N N 243 GLU N CA sing N N 244 GLU N H sing N N 245 GLU N H2 sing N N 246 GLU CA C sing N N 247 GLU CA CB sing N N 248 GLU CA HA sing N N 249 GLU C O doub N N 250 GLU C OXT sing N N 251 GLU CB CG sing N N 252 GLU CB HB2 sing N N 253 GLU CB HB3 sing N N 254 GLU CG CD sing N N 255 GLU CG HG2 sing N N 256 GLU CG HG3 sing N N 257 GLU CD OE1 doub N N 258 GLU CD OE2 sing N N 259 GLU OE2 HE2 sing N N 260 GLU OXT HXT sing N N 261 GLY N CA sing N N 262 GLY N H sing N N 263 GLY N H2 sing N N 264 GLY CA C sing N N 265 GLY CA HA2 sing N N 266 GLY CA HA3 sing N N 267 GLY C O doub N N 268 GLY C OXT sing N N 269 GLY OXT HXT sing N N 270 HIS N CA sing N N 271 HIS N H sing N N 272 HIS N H2 sing N N 273 HIS CA C sing N N 274 HIS CA CB sing N N 275 HIS CA HA sing N N 276 HIS C O doub N N 277 HIS C OXT sing N N 278 HIS CB CG sing N N 279 HIS CB HB2 sing N N 280 HIS CB HB3 sing N N 281 HIS CG ND1 sing Y N 282 HIS CG CD2 doub Y N 283 HIS ND1 CE1 doub Y N 284 HIS ND1 HD1 sing N N 285 HIS CD2 NE2 sing Y N 286 HIS CD2 HD2 sing N N 287 HIS CE1 NE2 sing Y N 288 HIS CE1 HE1 sing N N 289 HIS NE2 HE2 sing N N 290 HIS OXT HXT sing N N 291 HOH O H1 sing N N 292 HOH O H2 sing N N 293 ILE N CA sing N N 294 ILE N H sing N N 295 ILE N H2 sing N N 296 ILE CA C sing N N 297 ILE CA CB sing N N 298 ILE CA HA sing N N 299 ILE C O doub N N 300 ILE C OXT sing N N 301 ILE CB CG1 sing N N 302 ILE CB CG2 sing N N 303 ILE CB HB sing N N 304 ILE CG1 CD1 sing N N 305 ILE CG1 HG12 sing N N 306 ILE CG1 HG13 sing N N 307 ILE CG2 HG21 sing N N 308 ILE CG2 HG22 sing N N 309 ILE CG2 HG23 sing N N 310 ILE CD1 HD11 sing N N 311 ILE CD1 HD12 sing N N 312 ILE CD1 HD13 sing N N 313 ILE OXT HXT sing N N 314 JKR C12 C11 sing N N 315 JKR C12 O7 sing N N 316 JKR O9 P2 doub N N 317 JKR C11 C10 sing N N 318 JKR O7 P2 sing N N 319 JKR O8 P2 sing N N 320 JKR P2 O10 sing N N 321 JKR C10 O6 sing N N 322 JKR O6 C9 sing N N 323 JKR O10 C13 sing N N 324 JKR C9 C32 doub Y N 325 JKR C9 C8 sing Y N 326 JKR C7 C8 doub Y N 327 JKR C7 C6 sing Y N 328 JKR C13 C14 sing N N 329 JKR C32 C33 sing Y N 330 JKR C8 C35 sing Y N 331 JKR C6 C5 doub Y N 332 JKR C14 C15 sing N N 333 JKR C33 C34 doub Y N 334 JKR C35 C34 sing Y N 335 JKR C35 C4 doub Y N 336 JKR C5 C4 sing Y N 337 JKR C29 C30 doub Y N 338 JKR C29 C28 sing Y N 339 JKR C30 C31 sing Y N 340 JKR O11 C15 sing N N 341 JKR O11 C16 sing N N 342 JKR C4 O5 sing N N 343 JKR C28 C21 doub Y N 344 JKR C31 C16 doub Y N 345 JKR C31 C20 sing Y N 346 JKR C16 C17 sing Y N 347 JKR O5 C3 sing N N 348 JKR C21 C20 sing Y N 349 JKR C21 O12 sing N N 350 JKR C3 C2 sing N N 351 JKR C20 C19 doub Y N 352 JKR C17 C18 doub Y N 353 JKR C1 C2 sing N N 354 JKR C1 O4 sing N N 355 JKR C19 C18 sing Y N 356 JKR O4 P1 sing N N 357 JKR P1 O2 sing N N 358 JKR P1 O1 sing N N 359 JKR C5 H1 sing N N 360 JKR C6 H2 sing N N 361 JKR C2 H3 sing N N 362 JKR C2 H4 sing N N 363 JKR C3 H5 sing N N 364 JKR C3 H6 sing N N 365 JKR O1 H7 sing N N 366 JKR O2 H8 sing N N 367 JKR C1 H9 sing N N 368 JKR C1 H10 sing N N 369 JKR C7 H11 sing N N 370 JKR C10 H12 sing N N 371 JKR C10 H13 sing N N 372 JKR C11 H14 sing N N 373 JKR C11 H15 sing N N 374 JKR C12 H16 sing N N 375 JKR C12 H17 sing N N 376 JKR O8 H18 sing N N 377 JKR C13 H19 sing N N 378 JKR C13 H20 sing N N 379 JKR C14 H21 sing N N 380 JKR C14 H22 sing N N 381 JKR C15 H23 sing N N 382 JKR C15 H24 sing N N 383 JKR C17 H25 sing N N 384 JKR C18 H26 sing N N 385 JKR C19 H27 sing N N 386 JKR O12 H28 sing N N 387 JKR C28 H29 sing N N 388 JKR C29 H30 sing N N 389 JKR C30 H31 sing N N 390 JKR C32 H32 sing N N 391 JKR C33 H33 sing N N 392 JKR C34 H34 sing N N 393 JL0 C35 C36 doub Y N 394 JL0 C35 C34 sing Y N 395 JL0 C36 C37 sing Y N 396 JL0 O16 C33 doub N N 397 JL0 O17 C38 doub N N 398 JL0 C8 C9 sing N N 399 JL0 C8 C7 sing N N 400 JL0 C33 C34 sing N N 401 JL0 C33 N1 sing N N 402 JL0 C34 C43 doub Y N 403 JL0 C37 C38 sing N N 404 JL0 C37 C42 doub Y N 405 JL0 C38 N4 sing N N 406 JL0 C9 O3 sing N N 407 JL0 C7 N1 sing N N 408 JL0 N1 C6 sing N N 409 JL0 C43 C42 sing Y N 410 JL0 C43 C5 sing Y N 411 JL0 C42 C2 sing Y N 412 JL0 N4 C39 sing N N 413 JL0 N4 C1 sing N N 414 JL0 C39 C40 sing N N 415 JL0 C6 C5 sing N N 416 JL0 C6 O2 doub N N 417 JL0 C5 C4 doub Y N 418 JL0 C2 C1 sing N N 419 JL0 C2 C3 doub Y N 420 JL0 C1 O1 doub N N 421 JL0 O3 P1 sing N N 422 JL0 C40 C41 sing N N 423 JL0 C4 C3 sing Y N 424 JL0 O18 C41 sing N N 425 JL0 P1 O4 doub N N 426 JL0 P1 O5 sing N N 427 JL0 P1 O6 sing N N 428 JL0 O6 C10 sing N N 429 JL0 C11 C10 sing N N 430 JL0 C11 C12 sing N N 431 JL0 O7 C13 doub N N 432 JL0 C15 C16 doub Y N 433 JL0 C15 C14 sing Y N 434 JL0 C16 C17 sing Y N 435 JL0 C13 C14 sing N N 436 JL0 C13 N2 sing N N 437 JL0 C14 C31 doub Y N 438 JL0 C12 N2 sing N N 439 JL0 O8 C18 doub N N 440 JL0 N2 C30 sing N N 441 JL0 C17 C18 sing N N 442 JL0 C17 C32 doub Y N 443 JL0 C18 N3 sing N N 444 JL0 C31 C32 sing Y N 445 JL0 C31 C29 sing Y N 446 JL0 C32 C26 sing Y N 447 JL0 C30 C29 sing N N 448 JL0 C30 O15 doub N N 449 JL0 C29 C28 doub Y N 450 JL0 N3 C19 sing N N 451 JL0 N3 C25 sing N N 452 JL0 C26 C25 sing N N 453 JL0 C26 C27 doub Y N 454 JL0 C25 O14 doub N N 455 JL0 C28 C27 sing Y N 456 JL0 C3 H1 sing N N 457 JL0 C4 H2 sing N N 458 JL0 C7 H3 sing N N 459 JL0 C7 H4 sing N N 460 JL0 C8 H5 sing N N 461 JL0 C8 H6 sing N N 462 JL0 C9 H7 sing N N 463 JL0 C9 H8 sing N N 464 JL0 O5 H9 sing N N 465 JL0 C10 H10 sing N N 466 JL0 C10 H11 sing N N 467 JL0 C11 H12 sing N N 468 JL0 C11 H13 sing N N 469 JL0 C12 H14 sing N N 470 JL0 C12 H15 sing N N 471 JL0 C15 H16 sing N N 472 JL0 C16 H17 sing N N 473 JL0 C19 H18 sing N N 474 JL0 C19 H19 sing N N 475 JL0 C27 H21 sing N N 476 JL0 C28 H22 sing N N 477 JL0 C35 H23 sing N N 478 JL0 C36 H24 sing N N 479 JL0 C39 H25 sing N N 480 JL0 C39 H26 sing N N 481 JL0 C40 H27 sing N N 482 JL0 C40 H28 sing N N 483 JL0 C41 H29 sing N N 484 JL0 C41 H30 sing N N 485 JL0 O18 P2 sing N N 486 JL0 P2 O12 sing N N 487 JL0 P2 O11 sing N N 488 JL0 P2 O10 doub N N 489 JL0 O12 H31 sing N N 490 JL0 O11 H32 sing N N 491 JL0 C19 C20 sing N N 492 JL0 C20 C21 sing N N 493 JL0 C21 O9 sing N N 494 JL0 O9 P3 sing N N 495 JL0 P3 O21 sing N N 496 JL0 P3 O20 sing N N 497 JL0 P3 O13 doub N N 498 JL0 O21 C23 sing N N 499 JL0 C23 C24 sing N N 500 JL0 C24 C44 sing N N 501 JL0 C44 O19 sing N N 502 JL0 C20 H20 sing N N 503 JL0 C20 H33 sing N N 504 JL0 C21 H34 sing N N 505 JL0 C21 H35 sing N N 506 JL0 O20 H36 sing N N 507 JL0 C23 H37 sing N N 508 JL0 C23 H38 sing N N 509 JL0 C24 H39 sing N N 510 JL0 C24 H40 sing N N 511 JL0 C44 H41 sing N N 512 JL0 C44 H42 sing N N 513 JL0 O19 H43 sing N N 514 LEU N CA sing N N 515 LEU N H sing N N 516 LEU N H2 sing N N 517 LEU CA C sing N N 518 LEU CA CB sing N N 519 LEU CA HA sing N N 520 LEU C O doub N N 521 LEU C OXT sing N N 522 LEU CB CG sing N N 523 LEU CB HB2 sing N N 524 LEU CB HB3 sing N N 525 LEU CG CD1 sing N N 526 LEU CG CD2 sing N N 527 LEU CG HG sing N N 528 LEU CD1 HD11 sing N N 529 LEU CD1 HD12 sing N N 530 LEU CD1 HD13 sing N N 531 LEU CD2 HD21 sing N N 532 LEU CD2 HD22 sing N N 533 LEU CD2 HD23 sing N N 534 LEU OXT HXT sing N N 535 LYS N CA sing N N 536 LYS N H sing N N 537 LYS N H2 sing N N 538 LYS CA C sing N N 539 LYS CA CB sing N N 540 LYS CA HA sing N N 541 LYS C O doub N N 542 LYS C OXT sing N N 543 LYS CB CG sing N N 544 LYS CB HB2 sing N N 545 LYS CB HB3 sing N N 546 LYS CG CD sing N N 547 LYS CG HG2 sing N N 548 LYS CG HG3 sing N N 549 LYS CD CE sing N N 550 LYS CD HD2 sing N N 551 LYS CD HD3 sing N N 552 LYS CE NZ sing N N 553 LYS CE HE2 sing N N 554 LYS CE HE3 sing N N 555 LYS NZ HZ1 sing N N 556 LYS NZ HZ2 sing N N 557 LYS NZ HZ3 sing N N 558 LYS OXT HXT sing N N 559 MET N CA sing N N 560 MET N H sing N N 561 MET N H2 sing N N 562 MET CA C sing N N 563 MET CA CB sing N N 564 MET CA HA sing N N 565 MET C O doub N N 566 MET C OXT sing N N 567 MET CB CG sing N N 568 MET CB HB2 sing N N 569 MET CB HB3 sing N N 570 MET CG SD sing N N 571 MET CG HG2 sing N N 572 MET CG HG3 sing N N 573 MET SD CE sing N N 574 MET CE HE1 sing N N 575 MET CE HE2 sing N N 576 MET CE HE3 sing N N 577 MET OXT HXT sing N N 578 NAG C1 C2 sing N N 579 NAG C1 O1 sing N N 580 NAG C1 O5 sing N N 581 NAG C1 H1 sing N N 582 NAG C2 C3 sing N N 583 NAG C2 N2 sing N N 584 NAG C2 H2 sing N N 585 NAG C3 C4 sing N N 586 NAG C3 O3 sing N N 587 NAG C3 H3 sing N N 588 NAG C4 C5 sing N N 589 NAG C4 O4 sing N N 590 NAG C4 H4 sing N N 591 NAG C5 C6 sing N N 592 NAG C5 O5 sing N N 593 NAG C5 H5 sing N N 594 NAG C6 O6 sing N N 595 NAG C6 H61 sing N N 596 NAG C6 H62 sing N N 597 NAG C7 C8 sing N N 598 NAG C7 N2 sing N N 599 NAG C7 O7 doub N N 600 NAG C8 H81 sing N N 601 NAG C8 H82 sing N N 602 NAG C8 H83 sing N N 603 NAG N2 HN2 sing N N 604 NAG O1 HO1 sing N N 605 NAG O3 HO3 sing N N 606 NAG O4 HO4 sing N N 607 NAG O6 HO6 sing N N 608 PHE N CA sing N N 609 PHE N H sing N N 610 PHE N H2 sing N N 611 PHE CA C sing N N 612 PHE CA CB sing N N 613 PHE CA HA sing N N 614 PHE C O doub N N 615 PHE C OXT sing N N 616 PHE CB CG sing N N 617 PHE CB HB2 sing N N 618 PHE CB HB3 sing N N 619 PHE CG CD1 doub Y N 620 PHE CG CD2 sing Y N 621 PHE CD1 CE1 sing Y N 622 PHE CD1 HD1 sing N N 623 PHE CD2 CE2 doub Y N 624 PHE CD2 HD2 sing N N 625 PHE CE1 CZ doub Y N 626 PHE CE1 HE1 sing N N 627 PHE CE2 CZ sing Y N 628 PHE CE2 HE2 sing N N 629 PHE CZ HZ sing N N 630 PHE OXT HXT sing N N 631 PRO N CA sing N N 632 PRO N CD sing N N 633 PRO N H sing N N 634 PRO CA C sing N N 635 PRO CA CB sing N N 636 PRO CA HA sing N N 637 PRO C O doub N N 638 PRO C OXT sing N N 639 PRO CB CG sing N N 640 PRO CB HB2 sing N N 641 PRO CB HB3 sing N N 642 PRO CG CD sing N N 643 PRO CG HG2 sing N N 644 PRO CG HG3 sing N N 645 PRO CD HD2 sing N N 646 PRO CD HD3 sing N N 647 PRO OXT HXT sing N N 648 SER N CA sing N N 649 SER N H sing N N 650 SER N H2 sing N N 651 SER CA C sing N N 652 SER CA CB sing N N 653 SER CA HA sing N N 654 SER C O doub N N 655 SER C OXT sing N N 656 SER CB OG sing N N 657 SER CB HB2 sing N N 658 SER CB HB3 sing N N 659 SER OG HG sing N N 660 SER OXT HXT sing N N 661 THR N CA sing N N 662 THR N H sing N N 663 THR N H2 sing N N 664 THR CA C sing N N 665 THR CA CB sing N N 666 THR CA HA sing N N 667 THR C O doub N N 668 THR C OXT sing N N 669 THR CB OG1 sing N N 670 THR CB CG2 sing N N 671 THR CB HB sing N N 672 THR OG1 HG1 sing N N 673 THR CG2 HG21 sing N N 674 THR CG2 HG22 sing N N 675 THR CG2 HG23 sing N N 676 THR OXT HXT sing N N 677 TRP N CA sing N N 678 TRP N H sing N N 679 TRP N H2 sing N N 680 TRP CA C sing N N 681 TRP CA CB sing N N 682 TRP CA HA sing N N 683 TRP C O doub N N 684 TRP C OXT sing N N 685 TRP CB CG sing N N 686 TRP CB HB2 sing N N 687 TRP CB HB3 sing N N 688 TRP CG CD1 doub Y N 689 TRP CG CD2 sing Y N 690 TRP CD1 NE1 sing Y N 691 TRP CD1 HD1 sing N N 692 TRP CD2 CE2 doub Y N 693 TRP CD2 CE3 sing Y N 694 TRP NE1 CE2 sing Y N 695 TRP NE1 HE1 sing N N 696 TRP CE2 CZ2 sing Y N 697 TRP CE3 CZ3 doub Y N 698 TRP CE3 HE3 sing N N 699 TRP CZ2 CH2 doub Y N 700 TRP CZ2 HZ2 sing N N 701 TRP CZ3 CH2 sing Y N 702 TRP CZ3 HZ3 sing N N 703 TRP CH2 HH2 sing N N 704 TRP OXT HXT sing N N 705 TYR N CA sing N N 706 TYR N H sing N N 707 TYR N H2 sing N N 708 TYR CA C sing N N 709 TYR CA CB sing N N 710 TYR CA HA sing N N 711 TYR C O doub N N 712 TYR C OXT sing N N 713 TYR CB CG sing N N 714 TYR CB HB2 sing N N 715 TYR CB HB3 sing N N 716 TYR CG CD1 doub Y N 717 TYR CG CD2 sing Y N 718 TYR CD1 CE1 sing Y N 719 TYR CD1 HD1 sing N N 720 TYR CD2 CE2 doub Y N 721 TYR CD2 HD2 sing N N 722 TYR CE1 CZ doub Y N 723 TYR CE1 HE1 sing N N 724 TYR CE2 CZ sing Y N 725 TYR CE2 HE2 sing N N 726 TYR CZ OH sing N N 727 TYR OH HH sing N N 728 TYR OXT HXT sing N N 729 VAL N CA sing N N 730 VAL N H sing N N 731 VAL N H2 sing N N 732 VAL CA C sing N N 733 VAL CA CB sing N N 734 VAL CA HA sing N N 735 VAL C O doub N N 736 VAL C OXT sing N N 737 VAL CB CG1 sing N N 738 VAL CB CG2 sing N N 739 VAL CB HB sing N N 740 VAL CG1 HG11 sing N N 741 VAL CG1 HG12 sing N N 742 VAL CG1 HG13 sing N N 743 VAL CG2 HG21 sing N N 744 VAL CG2 HG22 sing N N 745 VAL CG2 HG23 sing N N 746 VAL OXT HXT sing N N 747 # _ndb_struct_conf_na.entry_id 7ZKM _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DG 15 1_555 C DG 1 1_555 2.089 3.160 -0.543 12.953 5.128 -90.633 1 A_DG15:DG1_A A 15 ? A 1 ? 6 3 1 C DG 5 1_555 C DG 2 1_555 2.025 2.596 0.211 -0.880 -6.939 -102.395 2 A_DG5:DG2_A A 5 ? A 2 ? 6 3 1 C DG 11 1_555 C DG 14 1_555 -1.247 -4.561 -0.076 5.020 5.539 86.696 3 A_DG11:DG14_A A 11 ? A 14 ? ? ? 1 C DG 6 1_555 C DG 10 1_555 2.324 2.539 -0.156 4.924 -1.459 -87.014 4 A_DG6:DG10_A A 6 ? A 10 ? 6 3 1 D DG 1 1_555 D DG 15 1_555 -1.418 -3.307 0.017 -7.303 0.073 92.253 5 B_DG1:DG15_B B 1 ? B 15 ? 6 3 1 D DG 2 1_555 D DG 5 1_555 -1.754 -3.111 -0.126 -0.982 16.501 92.228 6 B_DG2:DG5_B B 2 ? B 5 ? 6 3 1 D DG 14 1_555 D DG 11 1_555 1.761 3.341 0.194 1.773 -12.556 -93.661 7 B_DG14:DG11_B B 14 ? B 11 ? 6 3 1 D DG 6 1_555 D DG 10 1_555 1.901 3.133 -0.532 10.324 -7.655 -91.770 8 B_DG6:DG10_B B 6 ? B 10 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DG 15 1_555 C DG 1 1_555 C DG 5 1_555 C DG 2 1_555 -1.742 -2.770 0.795 163.948 -55.207 84.049 -1.333 1.032 -0.037 -27.972 -83.070 174.796 1 AA_DG15DG5:DG2DG1_AA A 15 ? A 1 ? A 5 ? A 2 ? 1 C DG 5 1_555 C DG 2 1_555 C DG 11 1_555 C DG 14 1_555 -1.981 -3.624 0.014 -10.554 1.413 170.095 -1.818 0.994 0.026 0.709 5.297 170.138 2 AA_DG5DG11:DG14DG2_AA A 5 ? A 2 ? A 11 ? A 14 ? 1 C DG 11 1_555 C DG 14 1_555 C DG 6 1_555 C DG 10 1_555 2.311 2.518 -0.549 -166.790 52.847 -67.361 -1.288 1.068 0.895 -26.762 -84.464 -175.808 3 AA_DG11DG6:DG10DG14_AA A 11 ? A 14 ? A 6 ? A 10 ? 1 D DG 1 1_555 D DG 15 1_555 D DG 2 1_555 D DG 5 1_555 -1.637 -2.800 0.085 170.783 -52.933 152.135 -1.400 0.818 -0.094 -26.472 -85.408 179.711 4 BB_DG1DG2:DG5DG15_BB B 1 ? B 15 ? B 2 ? B 5 ? 1 D DG 2 1_555 D DG 5 1_555 D DG 14 1_555 D DG 11 1_555 -1.753 -3.561 -0.088 -9.543 0.921 178.200 -1.781 0.877 -0.086 0.460 4.772 178.206 5 BB_DG2DG14:DG11DG5_BB B 2 ? B 5 ? B 14 ? B 11 ? 1 D DG 14 1_555 D DG 11 1_555 D DG 6 1_555 D DG 10 1_555 1.722 2.658 -0.078 -170.510 52.114 -89.733 -1.358 0.765 0.561 -26.130 -85.495 -178.793 6 BB_DG14DG6:DG10DG11_BB B 14 ? B 11 ? B 6 ? B 10 ? # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 4 NAG 1 n 4 NAG 2 n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 JKR ? ? JKR ? ? 'SUBJECT OF INVESTIGATION' ? 2 JL0 ? ? JL0 ? ? 'SUBJECT OF INVESTIGATION' ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1PPB _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 7ZKM _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.013055 _atom_sites.fract_transf_matrix[1][2] 0.007537 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015074 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007729 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C K N NA O P S # loop_