HEADER OXIDOREDUCTASE 25-APR-22 7ZOE TITLE IPNS H270E VARIANT IN COMPLEX WITH FE AND ACV UNDER ANAEROBIC TITLE 2 CONDITIONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOPENICILLIN N SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: IPNS; COMPND 5 EC: 1.21.3.1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS NIDULANS FGSC A4; SOURCE 3 ORGANISM_TAXID: 227321; SOURCE 4 STRAIN: FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139; SOURCE 5 GENE: IPNA, IPS, AN2622; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PCOLD_IPNS KEYWDS ISOPENICILLIN N SYNTHASE, ACTIVE SITE MUTATIONS, ANAEROBIC KEYWDS 2 CONDITIONS, ANTIBIOTIC BIOSYNTHESIS, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR P.RABE,C.J.SCHOFIELD REVDAT 2 07-FEB-24 7ZOE 1 REMARK REVDAT 1 10-MAY-23 7ZOE 0 JRNL AUTH P.RABE,C.J.SCHOFIELD JRNL TITL IPNS H270E VARIANT IN COMPLEX WITH FE AND ACV UNDER JRNL TITL 2 ANAEROBIC CONDITIONS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 60.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 51208 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 2550 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 60.1500 - 3.9300 1.00 2917 146 0.1491 0.1960 REMARK 3 2 3.9300 - 3.1200 1.00 2784 146 0.1357 0.1399 REMARK 3 3 3.1200 - 2.7300 1.00 2727 149 0.1446 0.1652 REMARK 3 4 2.7300 - 2.4800 1.00 2719 153 0.1396 0.1679 REMARK 3 5 2.4800 - 2.3000 1.00 2698 153 0.1356 0.1785 REMARK 3 6 2.3000 - 2.1600 1.00 2685 161 0.1431 0.1800 REMARK 3 7 2.1600 - 2.0600 1.00 2728 129 0.1463 0.1704 REMARK 3 8 2.0500 - 1.9700 1.00 2648 147 0.1439 0.1940 REMARK 3 9 1.9700 - 1.8900 1.00 2699 140 0.1650 0.1937 REMARK 3 10 1.8900 - 1.8200 1.00 2673 139 0.1698 0.2119 REMARK 3 11 1.8200 - 1.7700 1.00 2714 117 0.1809 0.2304 REMARK 3 12 1.7700 - 1.7200 1.00 2676 141 0.1838 0.2249 REMARK 3 13 1.7200 - 1.6700 1.00 2692 122 0.1941 0.2207 REMARK 3 14 1.6700 - 1.6300 1.00 2661 151 0.1951 0.2220 REMARK 3 15 1.6300 - 1.5900 1.00 2629 143 0.2053 0.2614 REMARK 3 16 1.5900 - 1.5600 1.00 2677 152 0.2215 0.2417 REMARK 3 17 1.5600 - 1.5300 1.00 2646 128 0.2451 0.3061 REMARK 3 18 1.5300 - 1.5000 1.00 2685 133 0.2534 0.2418 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.62 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 37 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.8544 -4.0411 -14.9589 REMARK 3 T TENSOR REMARK 3 T11: 0.1072 T22: 0.1334 REMARK 3 T33: 0.0986 T12: 0.0098 REMARK 3 T13: 0.0243 T23: -0.0388 REMARK 3 L TENSOR REMARK 3 L11: 1.1751 L22: 3.3098 REMARK 3 L33: 3.5104 L12: -0.4294 REMARK 3 L13: 0.6557 L23: -2.4307 REMARK 3 S TENSOR REMARK 3 S11: 0.0673 S12: 0.1206 S13: -0.0359 REMARK 3 S21: -0.1934 S22: -0.1307 S23: -0.0467 REMARK 3 S31: 0.1453 S32: 0.1993 S33: 0.0563 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 38 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.6725 1.1403 1.6690 REMARK 3 T TENSOR REMARK 3 T11: 0.0766 T22: 0.0723 REMARK 3 T33: 0.1313 T12: 0.0410 REMARK 3 T13: -0.0123 T23: 0.0139 REMARK 3 L TENSOR REMARK 3 L11: 2.0076 L22: 1.0709 REMARK 3 L33: 3.6697 L12: 0.7631 REMARK 3 L13: -0.1842 L23: 0.4614 REMARK 3 S TENSOR REMARK 3 S11: 0.0321 S12: 0.0163 S13: -0.0210 REMARK 3 S21: 0.0385 S22: 0.0492 S23: -0.1183 REMARK 3 S31: -0.0925 S32: 0.3745 S33: -0.0966 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 65 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9280 6.6950 23.9849 REMARK 3 T TENSOR REMARK 3 T11: 0.1362 T22: 0.0741 REMARK 3 T33: 0.0319 T12: -0.0008 REMARK 3 T13: -0.0010 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 6.6133 L22: 6.2377 REMARK 3 L33: 5.4297 L12: -1.1000 REMARK 3 L13: -2.0884 L23: -0.5021 REMARK 3 S TENSOR REMARK 3 S11: 0.1567 S12: -0.1446 S13: 0.2471 REMARK 3 S21: 0.1307 S22: -0.0862 S23: -0.0238 REMARK 3 S31: -0.2913 S32: 0.0849 S33: -0.0489 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 83 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.4052 6.7866 14.7070 REMARK 3 T TENSOR REMARK 3 T11: 0.1030 T22: 0.0983 REMARK 3 T33: 0.0948 T12: 0.0080 REMARK 3 T13: 0.0102 T23: -0.0154 REMARK 3 L TENSOR REMARK 3 L11: 0.8209 L22: 2.4772 REMARK 3 L33: 1.9162 L12: -0.4648 REMARK 3 L13: 0.4105 L23: -1.2890 REMARK 3 S TENSOR REMARK 3 S11: -0.0878 S12: -0.1082 S13: 0.0688 REMARK 3 S21: 0.2544 S22: 0.1001 S23: 0.0422 REMARK 3 S31: -0.2393 S32: -0.1665 S33: -0.0192 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.2634 15.4406 13.0950 REMARK 3 T TENSOR REMARK 3 T11: 0.1707 T22: 0.0913 REMARK 3 T33: 0.0864 T12: 0.0025 REMARK 3 T13: 0.0215 T23: -0.0294 REMARK 3 L TENSOR REMARK 3 L11: 5.3137 L22: 1.0944 REMARK 3 L33: 1.9349 L12: -0.4750 REMARK 3 L13: 0.9928 L23: -0.0729 REMARK 3 S TENSOR REMARK 3 S11: -0.0828 S12: -0.4557 S13: 0.2292 REMARK 3 S21: 0.0859 S22: 0.1024 S23: -0.0233 REMARK 3 S31: -0.3202 S32: -0.0797 S33: 0.0149 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 138 THROUGH 163 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.5310 9.5652 -2.5329 REMARK 3 T TENSOR REMARK 3 T11: 0.0892 T22: 0.0839 REMARK 3 T33: 0.0993 T12: 0.0030 REMARK 3 T13: 0.0157 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 1.5559 L22: 1.8686 REMARK 3 L33: 7.8398 L12: 1.4396 REMARK 3 L13: 2.4560 L23: 2.9984 REMARK 3 S TENSOR REMARK 3 S11: -0.0053 S12: 0.0697 S13: 0.0383 REMARK 3 S21: -0.0241 S22: 0.0370 S23: -0.0131 REMARK 3 S31: -0.2855 S32: 0.1853 S33: -0.0329 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 164 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.6665 9.9370 -9.5017 REMARK 3 T TENSOR REMARK 3 T11: 0.1001 T22: 0.1245 REMARK 3 T33: 0.1276 T12: 0.0242 REMARK 3 T13: 0.0029 T23: 0.0210 REMARK 3 L TENSOR REMARK 3 L11: 0.3213 L22: 1.3779 REMARK 3 L33: 8.5153 L12: 0.1388 REMARK 3 L13: 0.6392 L23: 2.4681 REMARK 3 S TENSOR REMARK 3 S11: 0.0048 S12: 0.0584 S13: 0.0670 REMARK 3 S21: -0.1958 S22: -0.0325 S23: 0.0966 REMARK 3 S31: -0.5476 S32: -0.3260 S33: 0.0375 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 184 THROUGH 286 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5199 -8.9012 3.9527 REMARK 3 T TENSOR REMARK 3 T11: 0.0930 T22: 0.0893 REMARK 3 T33: 0.1137 T12: 0.0003 REMARK 3 T13: 0.0133 T23: -0.0155 REMARK 3 L TENSOR REMARK 3 L11: 1.0618 L22: 0.8416 REMARK 3 L33: 1.6314 L12: 0.0315 REMARK 3 L13: 0.4398 L23: -0.2042 REMARK 3 S TENSOR REMARK 3 S11: 0.0272 S12: 0.0206 S13: -0.1001 REMARK 3 S21: 0.0191 S22: -0.0081 S23: -0.0369 REMARK 3 S31: 0.1314 S32: -0.0040 S33: -0.0290 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 287 THROUGH 312 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.0107 1.7254 -10.6324 REMARK 3 T TENSOR REMARK 3 T11: 0.1598 T22: 0.3426 REMARK 3 T33: 0.1778 T12: 0.0132 REMARK 3 T13: -0.0321 T23: -0.0426 REMARK 3 L TENSOR REMARK 3 L11: 1.6367 L22: 1.5686 REMARK 3 L33: 2.4511 L12: 0.4104 REMARK 3 L13: 0.5837 L23: 0.3661 REMARK 3 S TENSOR REMARK 3 S11: 0.0314 S12: 0.4007 S13: -0.1373 REMARK 3 S21: -0.2512 S22: -0.0718 S23: 0.2081 REMARK 3 S31: 0.0808 S32: -0.5489 S33: 0.0459 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 313 THROUGH 331 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.7193 -1.2789 8.3743 REMARK 3 T TENSOR REMARK 3 T11: 0.1229 T22: 0.1705 REMARK 3 T33: 0.1458 T12: -0.0069 REMARK 3 T13: 0.0222 T23: -0.0100 REMARK 3 L TENSOR REMARK 3 L11: 2.5401 L22: 6.4948 REMARK 3 L33: 4.6839 L12: -2.8608 REMARK 3 L13: 2.8395 L23: -5.4176 REMARK 3 S TENSOR REMARK 3 S11: -0.1336 S12: -0.1839 S13: -0.1020 REMARK 3 S21: 0.2018 S22: 0.3246 S23: 0.3274 REMARK 3 S31: -0.0087 S32: -0.4814 S33: -0.2301 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ZOE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-APR-22. REMARK 100 THE DEPOSITION ID IS D_1292122597. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51282 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 60.150 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 13.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6ZAE REMARK 200 REMARK 200 REMARK: NEEDLE, 4 UM X 4 UM X 120 UM REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7 M LI2SO4, 0.1 M TRIS PH 8.0, BATCH REMARK 280 MODE, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.70500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.68550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.36600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.68550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.70500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.36600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 11 CE NZ REMARK 470 LYS A 57 CE NZ REMARK 470 LYS A 59 NZ REMARK 470 MET A 63 CE REMARK 470 LYS A 80 CD CE NZ REMARK 470 LYS A 120 NZ REMARK 470 ARG A 173 CZ NH1 NH2 REMARK 470 LYS A 176 NZ REMARK 470 GLU A 197 OE1 OE2 REMARK 470 LYS A 201 CD CE NZ REMARK 470 LYS A 208 CE NZ REMARK 470 LYS A 266 CD CE NZ REMARK 470 LYS A 305 CB CG CD CE NZ REMARK 470 ARG A 308 NH1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 657 O HOH A 760 2.05 REMARK 500 O HOH A 510 O HOH A 841 2.15 REMARK 500 O HOH A 889 O HOH A 902 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 38 -113.22 -99.92 REMARK 500 HIS A 82 62.66 -108.11 REMARK 500 LYS A 97 -39.60 -135.60 REMARK 500 THR A 123 -8.72 78.16 REMARK 500 ASN A 230 -28.54 -153.59 REMARK 500 LEU A 288 -159.20 -88.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 404 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 214 NE2 REMARK 620 2 ASP A 216 OD1 104.7 REMARK 620 3 GLU A 270 OE2 111.5 103.5 REMARK 620 4 GLU A 270 OE2 112.9 103.6 1.5 REMARK 620 5 ACV A 403 S17 98.2 100.9 134.7 133.3 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6ZAE RELATED DB: PDB REMARK 900 RELATED ID: 1BK0 RELATED DB: PDB DBREF 7ZOE A 1 331 UNP P05326 IPNS_EMENI 1 331 SEQADV 7ZOE GLU A 270 UNP P05326 HIS 270 ENGINEERED MUTATION SEQRES 1 A 331 MET GLY SER VAL SER LYS ALA ASN VAL PRO LYS ILE ASP SEQRES 2 A 331 VAL SER PRO LEU PHE GLY ASP ASP GLN ALA ALA LYS MET SEQRES 3 A 331 ARG VAL ALA GLN GLN ILE ASP ALA ALA SER ARG ASP THR SEQRES 4 A 331 GLY PHE PHE TYR ALA VAL ASN HIS GLY ILE ASN VAL GLN SEQRES 5 A 331 ARG LEU SER GLN LYS THR LYS GLU PHE HIS MET SER ILE SEQRES 6 A 331 THR PRO GLU GLU LYS TRP ASP LEU ALA ILE ARG ALA TYR SEQRES 7 A 331 ASN LYS GLU HIS GLN ASP GLN VAL ARG ALA GLY TYR TYR SEQRES 8 A 331 LEU SER ILE PRO GLY LYS LYS ALA VAL GLU SER PHE CYS SEQRES 9 A 331 TYR LEU ASN PRO ASN PHE THR PRO ASP HIS PRO ARG ILE SEQRES 10 A 331 GLN ALA LYS THR PRO THR HIS GLU VAL ASN VAL TRP PRO SEQRES 11 A 331 ASP GLU THR LYS HIS PRO GLY PHE GLN ASP PHE ALA GLU SEQRES 12 A 331 GLN TYR TYR TRP ASP VAL PHE GLY LEU SER SER ALA LEU SEQRES 13 A 331 LEU LYS GLY TYR ALA LEU ALA LEU GLY LYS GLU GLU ASN SEQRES 14 A 331 PHE PHE ALA ARG HIS PHE LYS PRO ASP ASP THR LEU ALA SEQRES 15 A 331 SER VAL VAL LEU ILE ARG TYR PRO TYR LEU ASP PRO TYR SEQRES 16 A 331 PRO GLU ALA ALA ILE LYS THR ALA ALA ASP GLY THR LYS SEQRES 17 A 331 LEU SER PHE GLU TRP HIS GLU ASP VAL SER LEU ILE THR SEQRES 18 A 331 VAL LEU TYR GLN SER ASN VAL GLN ASN LEU GLN VAL GLU SEQRES 19 A 331 THR ALA ALA GLY TYR GLN ASP ILE GLU ALA ASP ASP THR SEQRES 20 A 331 GLY TYR LEU ILE ASN CYS GLY SER TYR MET ALA HIS LEU SEQRES 21 A 331 THR ASN ASN TYR TYR LYS ALA PRO ILE GLU ARG VAL LYS SEQRES 22 A 331 TRP VAL ASN ALA GLU ARG GLN SER LEU PRO PHE PHE VAL SEQRES 23 A 331 ASN LEU GLY TYR ASP SER VAL ILE ASP PRO PHE ASP PRO SEQRES 24 A 331 ARG GLU PRO ASN GLY LYS SER ASP ARG GLU PRO LEU SER SEQRES 25 A 331 TYR GLY ASP TYR LEU GLN ASN GLY LEU VAL SER LEU ILE SEQRES 26 A 331 ASN LYS ASN GLY GLN THR HET SO4 A 401 5 HET SO4 A 402 5 HET ACV A 403 24 HET FE A 404 1 HETNAM SO4 SULFATE ION HETNAM ACV L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D-VALINE HETNAM FE FE (III) ION FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 ACV C14 H25 N3 O6 S FORMUL 5 FE FE 3+ FORMUL 6 HOH *463(H2 O) HELIX 1 AA1 SER A 15 GLY A 19 5 5 HELIX 2 AA2 ASP A 21 ASP A 38 1 18 HELIX 3 AA3 ASN A 50 ILE A 65 1 16 HELIX 4 AA4 THR A 66 ALA A 74 1 9 HELIX 5 AA5 HIS A 114 ALA A 119 1 6 HELIX 6 AA6 GLY A 137 LEU A 164 1 28 HELIX 7 AA7 PHE A 171 PHE A 175 5 5 HELIX 8 AA8 PRO A 196 ILE A 200 5 5 HELIX 9 AA9 GLY A 254 THR A 261 1 8 HELIX 10 AB1 SER A 312 GLY A 329 1 18 SHEET 1 AA1 6 SER A 5 LYS A 6 0 SHEET 2 AA1 6 GLY A 238 ASP A 241 1 O ASP A 241 N SER A 5 SHEET 3 AA1 6 LEU A 231 THR A 235 -1 N VAL A 233 O GLN A 240 SHEET 4 AA1 6 ILE A 269 LYS A 273 -1 O ILE A 269 N GLU A 234 SHEET 5 AA1 6 LYS A 208 GLU A 215 -1 N SER A 210 O VAL A 272 SHEET 6 AA1 6 LYS A 201 THR A 202 -1 N LYS A 201 O LEU A 209 SHEET 1 AA2 8 LYS A 11 ASP A 13 0 SHEET 2 AA2 8 PHE A 41 VAL A 45 1 O TYR A 43 N ILE A 12 SHEET 3 AA2 8 TYR A 249 CYS A 253 -1 O ILE A 251 N PHE A 42 SHEET 4 AA2 8 ILE A 220 GLN A 225 -1 N LEU A 223 O LEU A 250 SHEET 5 AA2 8 ARG A 279 VAL A 286 -1 O LEU A 282 N TYR A 224 SHEET 6 AA2 8 SER A 183 TYR A 189 -1 N TYR A 189 O ARG A 279 SHEET 7 AA2 8 GLU A 101 TYR A 105 -1 N PHE A 103 O LEU A 186 SHEET 8 AA2 8 GLY A 89 TYR A 91 -1 N TYR A 91 O SER A 102 LINK NE2 HIS A 214 FE FE A 404 1555 1555 2.09 LINK OD1 ASP A 216 FE FE A 404 1555 1555 1.88 LINK OE2AGLU A 270 FE FE A 404 1555 1555 1.92 LINK OE2BGLU A 270 FE FE A 404 1555 1555 1.99 LINK S17 ACV A 403 FE FE A 404 1555 1555 2.29 CISPEP 1 ASP A 193 PRO A 194 0 0.37 CRYST1 41.410 74.732 101.371 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024149 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013381 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009865 0.00000