HEADER HYDROLASE 05-MAY-22 7ZRR TITLE CRYSTAL STRUCTURE OF HUMAN UROKINASE-TYPE PLASMINOGEN ACTIVATOR IN TITLE 2 COMPLEX WITH BICYCLE PEPTIDE INHIBITOR UK965 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UROKINASE-TYPE PLASMINOGEN ACTIVATOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: U-PLASMINOGEN ACTIVATOR,UPA; COMPND 5 EC: 3.4.21.73; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: SYNTHETIC PEPTIDE UK965; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PLAU; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HUMAN EMBRYONIC KIDNEY CELLS; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 15 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 17 EXPRESSION_SYSTEM_CELL_LINE: HUMAN EMBRYONIC KIDNEY CELLS KEYWDS UROKINASE-TYPE PLASMINOGEN ACTIVATOR, SERINE PROTEASE, PLASMINOGEN KEYWDS 2 ACTIVATOR, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.CAREGNATO,P.ANGELA,Y.MAZZOCCATO,N.FRASSON,A.ANGELINI,L.CENDRON REVDAT 1 15-NOV-23 7ZRR 0 JRNL AUTH A.CAREGNATO,P.ANGELA,Y.MAZZOCCATO,N.FRASSON,A.ANGELINI, JRNL AUTH 2 L.CENDRON JRNL TITL CRYSTAL STRUCTURE OF HUMAN UROKINASE-TYPE PLASMINOGEN JRNL TITL 2 ACTIVATOR IN COMPLEX WITH BICYCLE PEPTIDE INHIBITOR UK965 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 26428 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1353 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.64 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1929 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.50 REMARK 3 BIN R VALUE (WORKING SET) : 0.3230 REMARK 3 BIN FREE R VALUE SET COUNT : 83 REMARK 3 BIN FREE R VALUE : 0.3400 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2067 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 125 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : -0.08000 REMARK 3 B12 (A**2) : 0.01000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.124 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.119 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.100 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.054 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2240 ; 0.008 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3029 ; 1.550 ; 1.646 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 278 ; 6.901 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 116 ;27.141 ;20.776 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 378 ;15.644 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;14.585 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 285 ; 0.110 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1702 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7ZRR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1292122779. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAY-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8731 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28238 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.640 REMARK 200 RESOLUTION RANGE LOW (A) : 39.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.71100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3QN7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% PEG400, 50MM CITRATO PH 4.3, 1.8 M REMARK 280 (NH4)2SO4, 20% ETHYLENE GLYCOL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 60.45300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 34.90256 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 14.23867 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 60.45300 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 34.90256 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 14.23867 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 60.45300 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 34.90256 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 14.23867 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 69.80511 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 28.47733 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 69.80511 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 28.47733 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 69.80511 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 28.47733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A -30 REMARK 465 ALA A -29 REMARK 465 ALA A -28 REMARK 465 GLN A -27 REMARK 465 PRO A -26 REMARK 465 ALA A -25 REMARK 465 GLY A -24 REMARK 465 LYS A -23 REMARK 465 LYS A -22 REMARK 465 PRO A -21 REMARK 465 SER A -20 REMARK 465 SER A -19 REMARK 465 PRO A -18 REMARK 465 PRO A -17 REMARK 465 GLU A -16 REMARK 465 GLU A -15 REMARK 465 LEU A -14 REMARK 465 LYS A -13 REMARK 465 PHE A -12 REMARK 465 GLN A -11 REMARK 465 CYS A -10 REMARK 465 GLY A -9 REMARK 465 GLN A -8 REMARK 465 LYS A -7 REMARK 465 THR A -6 REMARK 465 LEU A -5 REMARK 465 ARG A -4 REMARK 465 PRO A -3 REMARK 465 ARG A -2 REMARK 465 PHE A -1 REMARK 465 LYS A 0 REMARK 465 GLU A 248 REMARK 465 ASN A 249 REMARK 465 GLY A 250 REMARK 465 LEU A 251 REMARK 465 ALA A 252 REMARK 465 LEU A 253 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C GLY B 17 N NH2 B 101 1.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 30 -67.22 -108.22 REMARK 500 SER A 43 -156.98 -154.61 REMARK 500 ASP A 90 -142.92 -96.16 REMARK 500 LEU A 92 -54.54 -123.88 REMARK 500 TYR A 126 19.62 59.34 REMARK 500 TYR A 172 -107.92 -87.40 REMARK 500 GLN A 207 40.97 39.55 REMARK 500 SER A 217 -63.97 -124.68 REMARK 500 REMARK 500 REMARK: NULL DBREF 7ZRR A -24 253 UNP P00749 UROK_HUMAN 154 431 DBREF 7ZRR B 2 17 PDB 7ZRR 7ZRR 2 17 SEQADV 7ZRR ASP A -30 UNP P00749 EXPRESSION TAG SEQADV 7ZRR ALA A -29 UNP P00749 EXPRESSION TAG SEQADV 7ZRR ALA A -28 UNP P00749 EXPRESSION TAG SEQADV 7ZRR GLN A -27 UNP P00749 EXPRESSION TAG SEQADV 7ZRR PRO A -26 UNP P00749 EXPRESSION TAG SEQADV 7ZRR ALA A -25 UNP P00749 EXPRESSION TAG SEQADV 7ZRR ALA A 121 UNP P00749 CYS 299 ENGINEERED MUTATION SEQADV 7ZRR GLN A 144 UNP P00749 ASN 322 ENGINEERED MUTATION SEQRES 1 A 284 ASP ALA ALA GLN PRO ALA GLY LYS LYS PRO SER SER PRO SEQRES 2 A 284 PRO GLU GLU LEU LYS PHE GLN CYS GLY GLN LYS THR LEU SEQRES 3 A 284 ARG PRO ARG PHE LYS ILE ILE GLY GLY GLU PHE THR THR SEQRES 4 A 284 ILE GLU ASN GLN PRO TRP PHE ALA ALA ILE TYR ARG ARG SEQRES 5 A 284 HIS ARG GLY GLY SER VAL THR TYR VAL CYS GLY GLY SER SEQRES 6 A 284 LEU ILE SER PRO CYS TRP VAL ILE SER ALA THR HIS CYS SEQRES 7 A 284 PHE ILE ASP TYR PRO LYS LYS GLU ASP TYR ILE VAL TYR SEQRES 8 A 284 LEU GLY ARG SER ARG LEU ASN SER ASN THR GLN GLY GLU SEQRES 9 A 284 MET LYS PHE GLU VAL GLU ASN LEU ILE LEU HIS LYS ASP SEQRES 10 A 284 TYR SER ALA ASP THR LEU ALA HIS HIS ASN ASP ILE ALA SEQRES 11 A 284 LEU LEU LYS ILE ARG SER LYS GLU GLY ARG CYS ALA GLN SEQRES 12 A 284 PRO SER ARG THR ILE GLN THR ILE ALA LEU PRO SER MET SEQRES 13 A 284 TYR ASN ASP PRO GLN PHE GLY THR SER CYS GLU ILE THR SEQRES 14 A 284 GLY PHE GLY LYS GLU GLN SER THR ASP TYR LEU TYR PRO SEQRES 15 A 284 GLU GLN LEU LYS MET THR VAL VAL LYS LEU ILE SER HIS SEQRES 16 A 284 ARG GLU CYS GLN GLN PRO HIS TYR TYR GLY SER GLU VAL SEQRES 17 A 284 THR THR LYS MET LEU CYS ALA ALA ASP PRO GLN TRP LYS SEQRES 18 A 284 THR ASP SER CYS GLN GLY ASP SER GLY GLY PRO LEU VAL SEQRES 19 A 284 CYS SER LEU GLN GLY ARG MET THR LEU THR GLY ILE VAL SEQRES 20 A 284 SER TRP GLY ARG GLY CYS ALA LEU LYS ASP LYS PRO GLY SEQRES 21 A 284 VAL TYR THR ARG VAL SER HIS PHE LEU PRO TRP ILE ARG SEQRES 22 A 284 SER HIS THR LYS GLU GLU ASN GLY LEU ALA LEU SEQRES 1 B 16 CYS SER ARG TYR GLU VAL ASP CYS ARG GLY ARG GLY GLY SEQRES 2 B 16 PRO CYS GLY HET 1PE A 301 16 HET EDO A 302 4 HET EDO A 303 4 HET NH2 B 101 1 HET ZBR B 102 9 HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM EDO 1,2-ETHANEDIOL HETNAM NH2 AMINO GROUP HETNAM ZBR 1,3,5-TRIS(BROMOMETHYL)BENZENE HETSYN 1PE PEG400 HETSYN EDO ETHYLENE GLYCOL FORMUL 3 1PE C10 H22 O6 FORMUL 4 EDO 2(C2 H6 O2) FORMUL 6 NH2 H2 N FORMUL 7 ZBR C9 H9 BR3 FORMUL 8 HOH *125(H2 O) HELIX 1 AA1 THR A 8 GLN A 12 5 5 HELIX 2 AA2 ALA A 44 PHE A 48 5 5 HELIX 3 AA3 LYS A 53 GLU A 55 5 3 HELIX 4 AA4 SER A 163 GLN A 168 1 6 HELIX 5 AA5 TYR A 173 VAL A 177 5 5 HELIX 6 AA6 PHE A 237 LYS A 246 1 10 SHEET 1 AA1 8 GLU A 5 PHE A 6 0 SHEET 2 AA1 8 LYS A 155 ILE A 162 -1 O MET A 156 N GLU A 5 SHEET 3 AA1 8 MET A 181 ALA A 185 -1 O ALA A 185 N LYS A 160 SHEET 4 AA1 8 GLY A 229 ARG A 233 -1 O TYR A 231 N LEU A 182 SHEET 5 AA1 8 ARG A 209 TRP A 218 -1 N TRP A 218 O VAL A 230 SHEET 6 AA1 8 PRO A 201 LEU A 206 -1 N CYS A 204 O THR A 211 SHEET 7 AA1 8 SER A 134 GLY A 139 -1 N GLU A 136 O VAL A 203 SHEET 8 AA1 8 LYS A 155 ILE A 162 -1 O VAL A 159 N CYS A 135 SHEET 1 AA2 7 PHE A 15 ARG A 21 0 SHEET 2 AA2 7 VAL A 27 SER A 37 -1 O VAL A 30 N ILE A 18 SHEET 3 AA2 7 TRP A 40 SER A 43 -1 O ILE A 42 N SER A 34 SHEET 4 AA2 7 ALA A 99 ARG A 104 -1 O LEU A 101 N VAL A 41 SHEET 5 AA2 7 MET A 74 LEU A 83 -1 N ILE A 82 O LEU A 100 SHEET 6 AA2 7 TYR A 57 LEU A 61 -1 N VAL A 59 O PHE A 76 SHEET 7 AA2 7 PHE A 15 ARG A 21 -1 N TYR A 19 O ILE A 58 SHEET 1 AA3 2 SER A 88 ALA A 89 0 SHEET 2 AA3 2 HIS A 94 HIS A 95 -1 O HIS A 95 N SER A 88 SSBOND 1 CYS A 31 CYS A 47 1555 1555 2.05 SSBOND 2 CYS A 39 CYS A 110 1555 1555 2.00 SSBOND 3 CYS A 135 CYS A 204 1555 1555 2.06 SSBOND 4 CYS A 167 CYS A 183 1555 1555 2.09 SSBOND 5 CYS A 194 CYS A 222 1555 1555 2.09 LINK SG CYS B 2 C9 ZBR B 102 1555 1555 1.78 LINK SG CYS B 9 C7 ZBR B 102 1555 1555 1.85 LINK SG CYS B 16 C8 ZBR B 102 1555 1555 1.69 CRYST1 120.906 120.906 42.716 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008271 0.004775 0.000000 0.00000 SCALE2 0.000000 0.009550 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023410 0.00000