HEADER FLAVOPROTEIN 06-MAY-22 7ZRY TITLE STRUCTURE OF THE 2A SPLICING VARIANT OF THE FULL-LENGTH HUMAN LSD1 TITLE 2 BOUND TO COREST (DELTA305) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOFORM OF LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BRAF35-HDAC COMPLEX PROTEIN BHC110,FLAVIN-CONTAINING AMINE COMPND 5 OXIDASE DOMAIN-CONTAINING PROTEIN 2,[HISTONE H3]-DIMETHYL-L-LYSINE(4) COMPND 6 FAD-DEPENDENT DEMETHYLASE 1A; COMPND 7 EC: 1.14.99.66; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: REST COREPRESSOR 1; COMPND 11 CHAIN: B; COMPND 12 SYNONYM: PROTEIN COREST; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KDM1A, AOF2, KDM1, KIAA0601, LSD1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: RCOR1, KIAA0071, RCOR; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS DEMETHYLASE, HISTONE, SPLICING, EPIGENETICS, FLAVOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.CAROLI,A.MATTEVI REVDAT 2 31-JAN-24 7ZRY 1 REMARK REVDAT 1 03-AUG-22 7ZRY 0 JRNL AUTH V.ASTRO,G.RAMIREZ-CALDERON,R.PENNUCCI,J.CAROLI,A.SAERA-VILA, JRNL AUTH 2 K.CARDONA-LONDONO,C.FORASTIERI,E.FIACCO,F.MAKSOUD, JRNL AUTH 3 M.ALOWAYSI,E.SOGNE,A.FALQUI,F.GONZALEZ,N.MONTSERRAT, JRNL AUTH 4 E.BATTAGLIOLI,A.MATTEVI,A.ADAMO JRNL TITL FINE-TUNED KDM1A ALTERNATIVE SPLICING REGULATES HUMAN JRNL TITL 2 CARDIOMYOGENESIS THROUGH AN ENZYMATIC-INDEPENDENT MECHANISM. JRNL REF ISCIENCE V. 25 04665 2022 JRNL REFN ESSN 2589-0042 JRNL PMID 35856020 JRNL DOI 10.1016/J.ISCI.2022.104665 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 69570 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.890 REMARK 3 FREE R VALUE TEST SET COUNT : 1997 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.1200 - 8.0900 0.98 4754 143 0.1498 0.1577 REMARK 3 2 8.0900 - 6.4200 1.00 4826 139 0.1783 0.2069 REMARK 3 3 6.4200 - 5.6100 1.00 4867 151 0.2008 0.2080 REMARK 3 4 5.6100 - 5.1000 1.00 4815 143 0.2032 0.2339 REMARK 3 5 5.1000 - 4.7400 1.00 4796 147 0.1749 0.1978 REMARK 3 6 4.7400 - 4.4600 0.99 4768 140 0.1734 0.1784 REMARK 3 7 4.4600 - 4.2300 1.00 4799 143 0.1779 0.1884 REMARK 3 8 4.2300 - 4.0500 1.00 4843 141 0.1909 0.2115 REMARK 3 9 4.0500 - 3.8900 1.00 4805 145 0.2004 0.2069 REMARK 3 10 3.8900 - 3.7600 1.00 4839 141 0.2163 0.2357 REMARK 3 11 3.7600 - 3.6400 1.00 4823 148 0.2368 0.2421 REMARK 3 12 3.6400 - 3.5400 1.00 4808 144 0.2507 0.2968 REMARK 3 13 3.5400 - 3.4400 1.00 4846 144 0.2566 0.2902 REMARK 3 14 3.4400 - 3.3600 1.00 4871 141 0.2652 0.3205 REMARK 3 15 3.3600 - 3.2800 1.00 4807 145 0.2668 0.2962 REMARK 3 16 3.2800 - 3.2100 1.00 4800 140 0.2887 0.3433 REMARK 3 17 3.2100 - 3.1500 1.00 4804 145 0.3145 0.3118 REMARK 3 18 3.1500 - 3.0900 1.00 4817 144 0.3326 0.3659 REMARK 3 19 3.0900 - 3.0400 1.00 4853 141 0.3456 0.4223 REMARK 3 20 3.0400 - 2.9800 1.00 4801 147 0.3672 0.3275 REMARK 3 21 2.9800 - 2.9400 1.00 4836 143 0.3743 0.5027 REMARK 3 22 2.9400 - 2.8900 1.00 4808 136 0.4005 0.4065 REMARK 3 23 2.8900 - 2.8500 1.00 4767 144 0.4175 0.3993 REMARK 3 24 2.8500 - 2.8100 0.99 4816 143 0.4155 0.5250 REMARK 3 25 2.8100 - 2.7700 0.99 4756 146 0.4251 0.5046 REMARK 3 26 2.7700 - 2.7300 0.97 4683 140 0.4425 0.4551 REMARK 3 27 2.7300 - 2.7000 0.87 4224 122 0.4540 0.4525 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.530 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 98.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ZRY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1292122806. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-OCT-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.999998 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 69570 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 49.120 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.10200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 3.10500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.680 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2V1D REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0-1.3 M NA/K TARTRATE, 0.1 M ADA PH REMARK 280 6.5, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 59.87750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 89.87350 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 117.30100 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 59.87750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 89.87350 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 117.30100 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 59.87750 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 89.87350 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 117.30100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 59.87750 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 89.87350 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 117.30100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 2 REMARK 465 SER A 3 REMARK 465 GLY A 4 REMARK 465 LYS A 5 REMARK 465 LYS A 6 REMARK 465 ALA A 7 REMARK 465 ALA A 8 REMARK 465 ALA A 9 REMARK 465 ALA A 10 REMARK 465 ALA A 11 REMARK 465 ALA A 12 REMARK 465 ALA A 13 REMARK 465 ALA A 14 REMARK 465 ALA A 15 REMARK 465 ALA A 16 REMARK 465 ALA A 17 REMARK 465 ALA A 18 REMARK 465 THR A 19 REMARK 465 GLY A 20 REMARK 465 THR A 21 REMARK 465 GLU A 22 REMARK 465 ALA A 23 REMARK 465 GLY A 24 REMARK 465 PRO A 25 REMARK 465 GLY A 26 REMARK 465 THR A 27 REMARK 465 ALA A 28 REMARK 465 GLY A 29 REMARK 465 GLY A 30 REMARK 465 SER A 31 REMARK 465 GLU A 32 REMARK 465 ASN A 33 REMARK 465 GLY A 34 REMARK 465 SER A 35 REMARK 465 GLU A 36 REMARK 465 VAL A 37 REMARK 465 ALA A 38 REMARK 465 ALA A 39 REMARK 465 GLN A 40 REMARK 465 PRO A 41 REMARK 465 ALA A 42 REMARK 465 GLY A 43 REMARK 465 LEU A 44 REMARK 465 SER A 45 REMARK 465 GLY A 46 REMARK 465 PRO A 47 REMARK 465 ALA A 48 REMARK 465 GLU A 49 REMARK 465 VAL A 50 REMARK 465 GLY A 51 REMARK 465 PRO A 52 REMARK 465 GLY A 53 REMARK 465 ALA A 54 REMARK 465 VAL A 55 REMARK 465 GLY A 56 REMARK 465 GLU A 57 REMARK 465 ARG A 58 REMARK 465 THR A 59 REMARK 465 PRO A 60 REMARK 465 ARG A 61 REMARK 465 LYS A 62 REMARK 465 LYS A 63 REMARK 465 GLU A 64 REMARK 465 PRO A 65 REMARK 465 PRO A 66 REMARK 465 ARG A 67 REMARK 465 ALA A 68 REMARK 465 SER A 69 REMARK 465 PRO A 70 REMARK 465 PRO A 71 REMARK 465 GLY A 72 REMARK 465 GLY A 73 REMARK 465 LEU A 74 REMARK 465 ALA A 75 REMARK 465 GLU A 76 REMARK 465 PRO A 77 REMARK 465 PRO A 78 REMARK 465 GLY A 79 REMARK 465 SER A 80 REMARK 465 ALA A 81 REMARK 465 GLY A 82 REMARK 465 PRO A 83 REMARK 465 GLN A 84 REMARK 465 ALA A 85 REMARK 465 GLY A 86 REMARK 465 PRO A 87 REMARK 465 THR A 88 REMARK 465 VAL A 89 REMARK 465 VAL A 90 REMARK 465 PRO A 91 REMARK 465 GLY A 92 REMARK 465 SER A 93 REMARK 465 ALA A 94 REMARK 465 THR A 95 REMARK 465 PRO A 96 REMARK 465 MET A 97 REMARK 465 GLU A 98 REMARK 465 THR A 99 REMARK 465 GLY A 100 REMARK 465 ILE A 101 REMARK 465 ALA A 102 REMARK 465 GLU A 103 REMARK 465 THR A 104 REMARK 465 PRO A 105 REMARK 465 GLU A 106 REMARK 465 GLY A 107 REMARK 465 ARG A 108 REMARK 465 ARG A 109 REMARK 465 THR A 110 REMARK 465 SER A 111 REMARK 465 ARG A 112 REMARK 465 ARG A 113 REMARK 465 LYS A 114 REMARK 465 ARG A 115 REMARK 465 ALA A 116 REMARK 465 LYS A 117 REMARK 465 VAL A 118 REMARK 465 GLU A 119 REMARK 465 TYR A 120 REMARK 465 ARG A 121 REMARK 465 GLU A 122 REMARK 465 MET A 123 REMARK 465 ASP A 124 REMARK 465 GLU A 125 REMARK 465 SER A 126 REMARK 465 LEU A 127 REMARK 465 ALA A 128 REMARK 465 ASN A 129 REMARK 465 LEU A 130 REMARK 465 SER A 131 REMARK 465 GLU A 132 REMARK 465 ASP A 133 REMARK 465 GLU A 134 REMARK 465 TYR A 135 REMARK 465 TYR A 136 REMARK 465 SER A 137 REMARK 465 GLU A 138 REMARK 465 GLU A 139 REMARK 465 GLU A 140 REMARK 465 ARG A 141 REMARK 465 ASN A 142 REMARK 465 ALA A 143 REMARK 465 LYS A 144 REMARK 465 ALA A 145 REMARK 465 GLU A 146 REMARK 465 LYS A 147 REMARK 465 GLU A 148 REMARK 465 LYS A 149 REMARK 465 LYS A 150 REMARK 465 LEU A 151 REMARK 465 PRO A 152 REMARK 465 PRO A 153 REMARK 465 PRO A 154 REMARK 465 PRO A 155 REMARK 465 PRO A 156 REMARK 465 GLN A 157 REMARK 465 ALA A 158 REMARK 465 PRO A 159 REMARK 465 PRO A 160 REMARK 465 GLU A 161 REMARK 465 GLU A 162 REMARK 465 GLU A 163 REMARK 465 ASN A 164 REMARK 465 GLU A 165 REMARK 465 SER A 166 REMARK 465 GLU A 167 REMARK 465 PRO A 168 REMARK 465 GLU A 169 REMARK 465 GLU A 170 REMARK 465 PRO A 171 REMARK 465 SER A 172 REMARK 465 GLY A 173 REMARK 465 GLN A 174 REMARK 465 ALA A 175 REMARK 465 GLY A 176 REMARK 465 GLY A 177 REMARK 465 LEU A 178 REMARK 465 GLN A 179 REMARK 465 ASP A 180 REMARK 465 ASP A 181 REMARK 465 SER A 182 REMARK 465 SER A 183 REMARK 465 GLY A 184 REMARK 465 GLY A 185 REMARK 465 TYR A 186 REMARK 465 GLY A 187 REMARK 465 ASP A 188 REMARK 465 GLY A 189 REMARK 465 GLN A 190 REMARK 465 ALA A 191 REMARK 465 PRO A 857 REMARK 465 ARG A 858 REMARK 465 GLN A 859 REMARK 465 ALA A 860 REMARK 465 THR A 861 REMARK 465 PRO A 862 REMARK 465 GLY A 863 REMARK 465 VAL A 864 REMARK 465 PRO A 865 REMARK 465 ALA A 866 REMARK 465 GLN A 867 REMARK 465 GLN A 868 REMARK 465 SER A 869 REMARK 465 PRO A 870 REMARK 465 SER A 871 REMARK 465 MET A 872 REMARK 465 ARG B 305 REMARK 465 ALA B 306 REMARK 465 LYS B 307 REMARK 465 HIS B 441 REMARK 465 GLY B 442 REMARK 465 LYS B 443 REMARK 465 GLU B 444 REMARK 465 GLU B 445 REMARK 465 THR B 446 REMARK 465 ASN B 447 REMARK 465 GLY B 448 REMARK 465 PRO B 449 REMARK 465 SER B 450 REMARK 465 ASN B 451 REMARK 465 GLN B 452 REMARK 465 LYS B 453 REMARK 465 PRO B 454 REMARK 465 VAL B 455 REMARK 465 LYS B 456 REMARK 465 SER B 457 REMARK 465 PRO B 458 REMARK 465 ASP B 459 REMARK 465 ASN B 460 REMARK 465 SER B 461 REMARK 465 ILE B 462 REMARK 465 LYS B 463 REMARK 465 MET B 464 REMARK 465 PRO B 465 REMARK 465 GLU B 466 REMARK 465 GLU B 467 REMARK 465 GLU B 468 REMARK 465 ASP B 469 REMARK 465 GLU B 470 REMARK 465 ALA B 471 REMARK 465 PRO B 472 REMARK 465 VAL B 473 REMARK 465 LEU B 474 REMARK 465 ASP B 475 REMARK 465 VAL B 476 REMARK 465 ARG B 477 REMARK 465 TYR B 478 REMARK 465 ALA B 479 REMARK 465 SER B 480 REMARK 465 ALA B 481 REMARK 465 SER B 482 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 422 36.07 70.79 REMARK 500 GLU A 532 2.69 -60.61 REMARK 500 ALA A 777 -52.41 -134.29 REMARK 500 TYR A 827 50.31 -141.04 REMARK 500 CYS B 379 107.11 -54.53 REMARK 500 ASN B 411 12.50 -146.18 REMARK 500 REMARK 500 REMARK: NULL DBREF 7ZRY A 1 872 PDB 7ZRY 7ZRY 1 872 DBREF 7ZRY B 305 482 UNP Q9UKL0 RCOR1_HUMAN 305 482 SEQRES 1 A 872 MET LEU SER GLY LYS LYS ALA ALA ALA ALA ALA ALA ALA SEQRES 2 A 872 ALA ALA ALA ALA ALA THR GLY THR GLU ALA GLY PRO GLY SEQRES 3 A 872 THR ALA GLY GLY SER GLU ASN GLY SER GLU VAL ALA ALA SEQRES 4 A 872 GLN PRO ALA GLY LEU SER GLY PRO ALA GLU VAL GLY PRO SEQRES 5 A 872 GLY ALA VAL GLY GLU ARG THR PRO ARG LYS LYS GLU PRO SEQRES 6 A 872 PRO ARG ALA SER PRO PRO GLY GLY LEU ALA GLU PRO PRO SEQRES 7 A 872 GLY SER ALA GLY PRO GLN ALA GLY PRO THR VAL VAL PRO SEQRES 8 A 872 GLY SER ALA THR PRO MET GLU THR GLY ILE ALA GLU THR SEQRES 9 A 872 PRO GLU GLY ARG ARG THR SER ARG ARG LYS ARG ALA LYS SEQRES 10 A 872 VAL GLU TYR ARG GLU MET ASP GLU SER LEU ALA ASN LEU SEQRES 11 A 872 SER GLU ASP GLU TYR TYR SER GLU GLU GLU ARG ASN ALA SEQRES 12 A 872 LYS ALA GLU LYS GLU LYS LYS LEU PRO PRO PRO PRO PRO SEQRES 13 A 872 GLN ALA PRO PRO GLU GLU GLU ASN GLU SER GLU PRO GLU SEQRES 14 A 872 GLU PRO SER GLY GLN ALA GLY GLY LEU GLN ASP ASP SER SEQRES 15 A 872 SER GLY GLY TYR GLY ASP GLY GLN ALA SER GLY VAL GLU SEQRES 16 A 872 GLY ALA ALA PHE GLN SER ARG LEU PRO HIS ASP ARG MET SEQRES 17 A 872 THR SER GLN GLU ALA ALA CYS PHE PRO ASP ILE ILE SER SEQRES 18 A 872 GLY PRO GLN GLN THR GLN LYS VAL PHE LEU PHE ILE ARG SEQRES 19 A 872 ASN ARG THR LEU GLN LEU TRP LEU ASP ASN PRO LYS ILE SEQRES 20 A 872 GLN LEU THR PHE GLU ALA THR LEU GLN GLN LEU GLU ALA SEQRES 21 A 872 PRO TYR ASN SER ASP THR VAL LEU VAL HIS ARG VAL HIS SEQRES 22 A 872 SER TYR LEU GLU ARG HIS GLY LEU ILE ASN PHE GLY ILE SEQRES 23 A 872 TYR LYS ARG ILE LYS PRO LEU PRO THR LYS LYS THR GLY SEQRES 24 A 872 LYS VAL ILE ILE ILE GLY SER GLY VAL SER GLY LEU ALA SEQRES 25 A 872 ALA ALA ARG GLN LEU GLN SER PHE GLY MET ASP VAL THR SEQRES 26 A 872 LEU LEU GLU ALA ARG ASP ARG VAL GLY GLY ARG VAL ALA SEQRES 27 A 872 THR PHE ARG LYS GLY ASN TYR VAL ALA ASP LEU GLY ALA SEQRES 28 A 872 MET VAL VAL THR GLY LEU GLY GLY ASN PRO MET ALA VAL SEQRES 29 A 872 VAL SER LYS GLN VAL ASN MET GLU LEU ALA LYS ILE LYS SEQRES 30 A 872 GLN LYS CYS PRO LEU TYR GLU ALA ASN GLY GLN ALA VAL SEQRES 31 A 872 PRO LYS GLU LYS ASP GLU MET VAL GLU GLN GLU PHE ASN SEQRES 32 A 872 ARG LEU LEU GLU ALA THR SER TYR LEU SER HIS GLN LEU SEQRES 33 A 872 ASP PHE ASN VAL LEU ASN ASN LYS PRO VAL SER LEU GLY SEQRES 34 A 872 GLN ALA LEU GLU VAL VAL ILE GLN LEU GLN GLU LYS HIS SEQRES 35 A 872 VAL LYS ASP GLU GLN ILE GLU HIS TRP LYS LYS ILE VAL SEQRES 36 A 872 LYS THR GLN GLU GLU LEU LYS GLU LEU LEU ASN LYS MET SEQRES 37 A 872 VAL ASN LEU LYS GLU LYS ILE LYS GLU LEU HIS GLN GLN SEQRES 38 A 872 TYR LYS GLU ALA SER GLU VAL LYS PRO PRO ARG ASP ILE SEQRES 39 A 872 THR ALA GLU PHE LEU VAL LYS SER LYS HIS ARG ASP LEU SEQRES 40 A 872 THR ALA LEU CYS LYS GLU TYR ASP GLU LEU ALA GLU THR SEQRES 41 A 872 GLN GLY LYS LEU GLU GLU LYS LEU GLN GLU LEU GLU ALA SEQRES 42 A 872 ASN PRO PRO SER ASP VAL TYR LEU SER SER ARG ASP ARG SEQRES 43 A 872 GLN ILE LEU ASP TRP HIS PHE ALA ASN LEU GLU PHE ALA SEQRES 44 A 872 ASN ALA THR PRO LEU SER THR LEU SER LEU LYS HIS TRP SEQRES 45 A 872 ASP GLN ASP ASP ASP PHE GLU PHE THR GLY SER HIS LEU SEQRES 46 A 872 THR VAL ARG ASN GLY TYR SER CYS VAL PRO VAL ALA LEU SEQRES 47 A 872 ALA GLU GLY LEU ASP ILE LYS LEU ASN THR ALA VAL ARG SEQRES 48 A 872 GLN VAL ARG TYR THR ALA SER GLY CYS GLU VAL ILE ALA SEQRES 49 A 872 VAL ASN THR ARG SER THR SER GLN THR PHE ILE TYR LYS SEQRES 50 A 872 CYS ASP ALA VAL LEU CYS THR LEU PRO LEU GLY VAL LEU SEQRES 51 A 872 LYS GLN GLN PRO PRO ALA VAL GLN PHE VAL PRO PRO LEU SEQRES 52 A 872 PRO GLU TRP LYS THR SER ALA VAL GLN ARG MET GLY PHE SEQRES 53 A 872 GLY ASN LEU ASN LYS VAL VAL LEU CYS PHE ASP ARG VAL SEQRES 54 A 872 PHE TRP ASP PRO SER VAL ASN LEU PHE GLY HIS VAL GLY SEQRES 55 A 872 SER THR THR ALA SER ARG GLY GLU LEU PHE LEU PHE TRP SEQRES 56 A 872 ASN LEU TYR LYS ALA PRO ILE LEU LEU ALA LEU VAL ALA SEQRES 57 A 872 GLY GLU ALA ALA GLY ILE MET GLU ASN ILE SER ASP ASP SEQRES 58 A 872 VAL ILE VAL GLY ARG CYS LEU ALA ILE LEU LYS GLY ILE SEQRES 59 A 872 PHE GLY SER SER ALA VAL PRO GLN PRO LYS GLU THR VAL SEQRES 60 A 872 VAL SER ARG TRP ARG ALA ASP PRO TRP ALA ARG GLY SER SEQRES 61 A 872 TYR SER TYR VAL ALA ALA GLY SER SER GLY ASN ASP TYR SEQRES 62 A 872 ASP LEU MET ALA GLN PRO ILE THR PRO GLY PRO SER ILE SEQRES 63 A 872 PRO GLY ALA PRO GLN PRO ILE PRO ARG LEU PHE PHE ALA SEQRES 64 A 872 GLY GLU HIS THR ILE ARG ASN TYR PRO ALA THR VAL HIS SEQRES 65 A 872 GLY ALA LEU LEU SER GLY LEU ARG GLU ALA GLY ARG ILE SEQRES 66 A 872 ALA ASP GLN PHE LEU GLY ALA MET TYR THR LEU PRO ARG SEQRES 67 A 872 GLN ALA THR PRO GLY VAL PRO ALA GLN GLN SER PRO SER SEQRES 68 A 872 MET SEQRES 1 B 178 ARG ALA LYS ARG LYS PRO PRO LYS GLY MET PHE LEU SER SEQRES 2 B 178 GLN GLU ASP VAL GLU ALA VAL SER ALA ASN ALA THR ALA SEQRES 3 B 178 ALA THR THR VAL LEU ARG GLN LEU ASP MET GLU LEU VAL SEQRES 4 B 178 SER VAL LYS ARG GLN ILE GLN ASN ILE LYS GLN THR ASN SEQRES 5 B 178 SER ALA LEU LYS GLU LYS LEU ASP GLY GLY ILE GLU PRO SEQRES 6 B 178 TYR ARG LEU PRO GLU VAL ILE GLN LYS CYS ASN ALA ARG SEQRES 7 B 178 TRP THR THR GLU GLU GLN LEU LEU ALA VAL GLN ALA ILE SEQRES 8 B 178 ARG LYS TYR GLY ARG ASP PHE GLN ALA ILE SER ASP VAL SEQRES 9 B 178 ILE GLY ASN LYS SER VAL VAL GLN VAL LYS ASN PHE PHE SEQRES 10 B 178 VAL ASN TYR ARG ARG ARG PHE ASN ILE ASP GLU VAL LEU SEQRES 11 B 178 GLN GLU TRP GLU ALA GLU HIS GLY LYS GLU GLU THR ASN SEQRES 12 B 178 GLY PRO SER ASN GLN LYS PRO VAL LYS SER PRO ASP ASN SEQRES 13 B 178 SER ILE LYS MET PRO GLU GLU GLU ASP GLU ALA PRO VAL SEQRES 14 B 178 LEU ASP VAL ARG TYR ALA SER ALA SER HET FAD A 901 53 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE FORMUL 3 FAD C27 H33 N9 O15 P2 HELIX 1 AA1 GLY A 193 SER A 201 1 9 HELIX 2 AA2 THR A 209 PHE A 216 1 8 HELIX 3 AA3 PHE A 216 SER A 221 1 6 HELIX 4 AA4 PRO A 223 ASN A 244 1 22 HELIX 5 AA5 THR A 250 LEU A 258 1 9 HELIX 6 AA6 ASP A 265 HIS A 279 1 15 HELIX 7 AA7 GLY A 307 PHE A 320 1 14 HELIX 8 AA8 ASN A 360 VAL A 369 1 10 HELIX 9 AA9 PRO A 391 ASP A 417 1 27 HELIX 10 AB1 SER A 427 GLU A 487 1 61 HELIX 11 AB2 ASP A 493 GLU A 532 1 40 HELIX 12 AB3 SER A 542 ALA A 561 1 20 HELIX 13 AB4 ASP A 575 GLU A 579 5 5 HELIX 14 AB5 SER A 592 GLU A 600 1 9 HELIX 15 AB6 PRO A 646 GLN A 652 1 7 HELIX 16 AB7 PRO A 664 MET A 674 1 11 HELIX 17 AB8 GLU A 730 GLU A 736 1 7 HELIX 18 AB9 SER A 739 GLY A 756 1 18 HELIX 19 AC1 SER A 789 GLN A 798 1 10 HELIX 20 AC2 GLY A 820 ILE A 824 5 5 HELIX 21 AC3 THR A 830 LEU A 850 1 21 HELIX 22 AC4 SER B 317 SER B 325 1 9 HELIX 23 AC5 THR B 329 LEU B 363 1 35 HELIX 24 AC6 ILE B 367 ARG B 371 5 5 HELIX 25 AC7 THR B 384 GLY B 399 1 16 HELIX 26 AC8 ASP B 401 GLY B 410 1 10 HELIX 27 AC9 SER B 413 ARG B 425 1 13 HELIX 28 AD1 ASN B 429 GLU B 438 1 10 SHEET 1 AA1 5 ASP A 603 LYS A 605 0 SHEET 2 AA1 5 ASP A 323 LEU A 327 1 N LEU A 326 O LYS A 605 SHEET 3 AA1 5 LYS A 300 ILE A 304 1 N VAL A 301 O ASP A 323 SHEET 4 AA1 5 ALA A 640 CYS A 643 1 O LEU A 642 N ILE A 302 SHEET 5 AA1 5 LEU A 816 PHE A 818 1 O PHE A 817 N CYS A 643 SHEET 1 AA2 2 PHE A 340 LYS A 342 0 SHEET 2 AA2 2 TYR A 345 ALA A 347 -1 O ALA A 347 N PHE A 340 SHEET 1 AA3 3 VAL A 353 VAL A 354 0 SHEET 2 AA3 3 LEU A 585 VAL A 587 -1 O LEU A 585 N VAL A 354 SHEET 3 AA3 3 LEU A 373 LYS A 375 -1 N ALA A 374 O THR A 586 SHEET 1 AA4 4 THR A 633 CYS A 638 0 SHEET 2 AA4 4 GLY A 619 ASN A 626 -1 N ALA A 624 O PHE A 634 SHEET 3 AA4 4 THR A 608 THR A 616 -1 N ARG A 611 O ILE A 623 SHEET 4 AA4 4 GLN A 658 VAL A 660 1 O VAL A 660 N VAL A 613 SHEET 1 AA5 2 GLY A 675 PHE A 676 0 SHEET 2 AA5 2 SER A 782 TYR A 783 -1 O TYR A 783 N GLY A 675 SHEET 1 AA6 5 LEU A 697 GLY A 699 0 SHEET 2 AA6 5 LEU A 713 TRP A 715 -1 O PHE A 714 N PHE A 698 SHEET 3 AA6 5 ILE A 722 VAL A 727 -1 O LEU A 724 N TRP A 715 SHEET 4 AA6 5 ASN A 680 CYS A 685 -1 N VAL A 682 O ALA A 725 SHEET 5 AA6 5 GLU A 765 VAL A 768 -1 O VAL A 767 N VAL A 683 CISPEP 1 ALA A 260 PRO A 261 0 -0.16 CISPEP 2 PRO A 490 PRO A 491 0 21.48 CISPEP 3 GLN A 653 PRO A 654 0 8.56 CISPEP 4 VAL A 660 PRO A 661 0 1.17 CRYST1 119.755 179.747 234.602 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008350 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005563 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004263 0.00000