HEADER HYDROLASE 20-MAY-22 7ZXA TITLE CRYSTAL STRUCTURE OF HUMAN CATHEPSIN L WITH COVALENTLY BOUND TITLE 2 ALOXISTATIN (E-64D) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATHEPSIN L; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CTSL, CTSL1; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PHAFFII GS115; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 644223 KEYWDS CYSTEIN PROTEASE, DRUG TARGET, LYSOSOME, VIRUS CELL ENTRY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.FALKE,J.LIESKE,S.GUENTHER,P.Y.A.REINKE,W.EWERT,J.LOBODA,K.KARNICAR, AUTHOR 2 A.USENIK,N.LINDIC,A.SEKIRNIK,H.N.CHAPMAN,W.HINRICHS,D.TURK,A.MEENTS REVDAT 4 22-MAY-24 7ZXA 1 JRNL REVDAT 3 15-MAY-24 7ZXA 1 JRNL REVDAT 2 07-FEB-24 7ZXA 1 REMARK REVDAT 1 31-MAY-23 7ZXA 0 JRNL AUTH S.FALKE,J.LIESKE,A.HERRMANN,J.LOBODA,K.KARNICAR,S.GUNTHER, JRNL AUTH 2 P.Y.A.REINKE,W.EWERT,A.USENIK,N.LINDIC,A.SEKIRNIK,K.DRETNIK, JRNL AUTH 3 H.TSUGE,V.TURK,H.N.CHAPMAN,W.HINRICHS,G.EBERT,D.TURK, JRNL AUTH 4 A.MEENTS JRNL TITL STRUCTURAL ELUCIDATION AND ANTIVIRAL ACTIVITY OF COVALENT JRNL TITL 2 CATHEPSIN L INHIBITORS. JRNL REF J.MED.CHEM. V. 67 7048 2024 JRNL REFN ISSN 0022-2623 JRNL PMID 38630165 JRNL DOI 10.1021/ACS.JMEDCHEM.3C02351 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18-3855_9999 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.6 REMARK 3 NUMBER OF REFLECTIONS : 97460 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1991 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.3800 - 3.8600 0.94 6822 147 0.1535 0.1754 REMARK 3 2 3.8600 - 3.0600 0.96 6963 153 0.1394 0.1832 REMARK 3 3 3.0600 - 2.6700 0.97 7083 149 0.1453 0.1833 REMARK 3 4 2.6700 - 2.4300 0.97 7129 145 0.1417 0.1488 REMARK 3 5 2.4300 - 2.2600 0.87 6322 135 0.1489 0.1823 REMARK 3 6 2.2600 - 2.1200 0.94 6842 145 0.1510 0.1939 REMARK 3 7 2.1200 - 2.0200 0.95 6960 152 0.1649 0.1926 REMARK 3 8 2.0200 - 1.9300 0.96 6948 135 0.1733 0.1943 REMARK 3 9 1.9300 - 1.8500 0.95 7022 140 0.1970 0.2344 REMARK 3 10 1.8500 - 1.7900 0.96 6921 146 0.2175 0.2792 REMARK 3 11 1.7900 - 1.7300 0.94 6876 132 0.2457 0.2819 REMARK 3 12 1.7300 - 1.6800 0.86 6179 144 0.2625 0.2568 REMARK 3 13 1.6800 - 1.6400 0.91 6694 139 0.2838 0.3107 REMARK 3 14 1.6400 - 1.6000 0.92 6708 129 0.3104 0.3398 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.172 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.128 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.32 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.33 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 7450 REMARK 3 ANGLE : 0.768 10013 REMARK 3 CHIRALITY : 0.047 976 REMARK 3 PLANARITY : 0.005 1328 REMARK 3 DIHEDRAL : 10.659 1172 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 26 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.4672 -9.2836 -4.6577 REMARK 3 T TENSOR REMARK 3 T11: 0.1809 T22: 0.1578 REMARK 3 T33: 0.1427 T12: -0.0064 REMARK 3 T13: 0.0340 T23: -0.0497 REMARK 3 L TENSOR REMARK 3 L11: 5.4005 L22: 3.0085 REMARK 3 L33: 3.3481 L12: 0.6368 REMARK 3 L13: 1.8660 L23: 1.1367 REMARK 3 S TENSOR REMARK 3 S11: -0.0964 S12: -0.0629 S13: 0.1515 REMARK 3 S21: 0.0787 S22: 0.0870 S23: -0.1332 REMARK 3 S31: -0.1024 S32: 0.0158 S33: -0.0036 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.8735 -20.9927 -12.5734 REMARK 3 T TENSOR REMARK 3 T11: 0.1690 T22: 0.1862 REMARK 3 T33: 0.1957 T12: -0.0280 REMARK 3 T13: 0.0190 T23: -0.0718 REMARK 3 L TENSOR REMARK 3 L11: 3.3949 L22: 3.7346 REMARK 3 L33: 2.4433 L12: 1.6565 REMARK 3 L13: 0.1818 L23: 0.3010 REMARK 3 S TENSOR REMARK 3 S11: 0.0383 S12: 0.1040 S13: -0.1749 REMARK 3 S21: -0.1144 S22: 0.1174 S23: -0.2307 REMARK 3 S31: 0.1142 S32: 0.0916 S33: -0.1152 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 81 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.0820 -19.0415 -20.0825 REMARK 3 T TENSOR REMARK 3 T11: 0.2522 T22: 0.2464 REMARK 3 T33: 0.1808 T12: -0.0438 REMARK 3 T13: -0.0245 T23: -0.0469 REMARK 3 L TENSOR REMARK 3 L11: 4.4589 L22: 5.8579 REMARK 3 L33: 2.7263 L12: -2.7838 REMARK 3 L13: -2.8996 L23: 3.5827 REMARK 3 S TENSOR REMARK 3 S11: -0.1161 S12: 0.1620 S13: -0.1953 REMARK 3 S21: -0.3932 S22: 0.0675 S23: 0.1430 REMARK 3 S31: 0.0262 S32: -0.1940 S33: 0.0199 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 105 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.2609 -21.1925 -3.5904 REMARK 3 T TENSOR REMARK 3 T11: 0.1787 T22: 0.2502 REMARK 3 T33: 0.3702 T12: 0.0356 REMARK 3 T13: 0.0082 T23: -0.0933 REMARK 3 L TENSOR REMARK 3 L11: 1.4854 L22: 2.4753 REMARK 3 L33: 8.7893 L12: 0.4695 REMARK 3 L13: 2.2343 L23: -0.2953 REMARK 3 S TENSOR REMARK 3 S11: 0.1624 S12: 0.0543 S13: -0.4644 REMARK 3 S21: 0.1746 S22: 0.2357 S23: -0.4329 REMARK 3 S31: 0.4697 S32: 0.2163 S33: -0.3358 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 129 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.2329 -11.2565 7.7514 REMARK 3 T TENSOR REMARK 3 T11: 0.1554 T22: 0.1910 REMARK 3 T33: 0.1903 T12: -0.0093 REMARK 3 T13: -0.0166 T23: 0.0145 REMARK 3 L TENSOR REMARK 3 L11: 0.7246 L22: 2.5660 REMARK 3 L33: 4.7291 L12: 0.5078 REMARK 3 L13: 0.5862 L23: 2.8998 REMARK 3 S TENSOR REMARK 3 S11: 0.0913 S12: -0.0684 S13: -0.1023 REMARK 3 S21: 0.2087 S22: 0.0246 S23: -0.0164 REMARK 3 S31: 0.3053 S32: -0.1778 S33: -0.1138 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 187 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.7503 -12.5832 3.3419 REMARK 3 T TENSOR REMARK 3 T11: 0.1335 T22: 0.1484 REMARK 3 T33: 0.1910 T12: -0.0479 REMARK 3 T13: -0.0013 T23: -0.0283 REMARK 3 L TENSOR REMARK 3 L11: 3.0880 L22: 3.4014 REMARK 3 L33: 2.9390 L12: -0.8131 REMARK 3 L13: 0.2826 L23: 0.8551 REMARK 3 S TENSOR REMARK 3 S11: 0.0085 S12: -0.1132 S13: -0.0311 REMARK 3 S21: 0.1980 S22: 0.1047 S23: -0.2971 REMARK 3 S31: 0.0678 S32: 0.1050 S33: -0.0963 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.4307 5.0421 17.0850 REMARK 3 T TENSOR REMARK 3 T11: 0.0554 T22: 0.1812 REMARK 3 T33: 0.1873 T12: -0.0250 REMARK 3 T13: 0.0147 T23: -0.0312 REMARK 3 L TENSOR REMARK 3 L11: 4.7635 L22: 8.3034 REMARK 3 L33: 2.8580 L12: -1.2962 REMARK 3 L13: 0.3590 L23: -0.5163 REMARK 3 S TENSOR REMARK 3 S11: -0.0424 S12: 0.1596 S13: 0.1821 REMARK 3 S21: -0.1169 S22: 0.0354 S23: -0.1813 REMARK 3 S31: -0.0674 S32: 0.0447 S33: 0.0269 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 25 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.0067 -4.2321 23.4812 REMARK 3 T TENSOR REMARK 3 T11: 0.1413 T22: 0.1639 REMARK 3 T33: 0.2268 T12: 0.0302 REMARK 3 T13: -0.0064 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 2.4292 L22: 2.4850 REMARK 3 L33: 1.3536 L12: 1.5249 REMARK 3 L13: 0.2594 L23: 0.1010 REMARK 3 S TENSOR REMARK 3 S11: -0.0111 S12: -0.0261 S13: -0.2809 REMARK 3 S21: 0.0737 S22: 0.0235 S23: -0.0805 REMARK 3 S31: 0.1086 S32: 0.0001 S33: -0.0269 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 81 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.0207 -9.3594 31.4884 REMARK 3 T TENSOR REMARK 3 T11: 0.2353 T22: 0.1967 REMARK 3 T33: 0.3024 T12: 0.0443 REMARK 3 T13: -0.0919 T23: 0.0375 REMARK 3 L TENSOR REMARK 3 L11: 6.9659 L22: 4.0326 REMARK 3 L33: 3.3212 L12: -1.1515 REMARK 3 L13: -2.8361 L23: -0.1823 REMARK 3 S TENSOR REMARK 3 S11: -0.1171 S12: -0.3135 S13: -0.3726 REMARK 3 S21: 0.4309 S22: -0.0374 S23: -0.3546 REMARK 3 S31: 0.2359 S32: 0.2614 S33: 0.1444 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 105 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.0245 6.0299 14.5351 REMARK 3 T TENSOR REMARK 3 T11: 0.0968 T22: 0.1701 REMARK 3 T33: 0.1898 T12: 0.0318 REMARK 3 T13: 0.0034 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 3.2284 L22: 2.9162 REMARK 3 L33: 6.2357 L12: 0.3798 REMARK 3 L13: -0.2011 L23: -2.6731 REMARK 3 S TENSOR REMARK 3 S11: -0.0539 S12: 0.3929 S13: 0.1292 REMARK 3 S21: -0.0515 S22: 0.2329 S23: 0.0353 REMARK 3 S31: -0.0787 S32: -0.3119 S33: -0.2051 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 129 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.2061 4.2037 4.1978 REMARK 3 T TENSOR REMARK 3 T11: 0.1844 T22: 0.4132 REMARK 3 T33: 0.2405 T12: -0.0245 REMARK 3 T13: 0.0294 T23: -0.0212 REMARK 3 L TENSOR REMARK 3 L11: 3.9253 L22: 2.3571 REMARK 3 L33: 2.8207 L12: -0.5635 REMARK 3 L13: -0.9742 L23: 1.3188 REMARK 3 S TENSOR REMARK 3 S11: 0.0536 S12: 0.9218 S13: 0.0830 REMARK 3 S21: -0.4095 S22: 0.0819 S23: -0.2393 REMARK 3 S31: -0.1818 S32: 0.1620 S33: -0.0702 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 187 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.0654 3.0485 8.5822 REMARK 3 T TENSOR REMARK 3 T11: 0.1672 T22: 0.2371 REMARK 3 T33: 0.2307 T12: -0.0123 REMARK 3 T13: 0.0241 T23: -0.0418 REMARK 3 L TENSOR REMARK 3 L11: 4.1826 L22: 1.0384 REMARK 3 L33: 2.4140 L12: 0.2986 REMARK 3 L13: -0.6098 L23: -0.0757 REMARK 3 S TENSOR REMARK 3 S11: 0.0045 S12: 0.5361 S13: -0.1467 REMARK 3 S21: -0.0887 S22: 0.0550 S23: -0.1289 REMARK 3 S31: -0.1521 S32: 0.1198 S33: -0.0401 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 2 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.0815 6.3301 -10.9389 REMARK 3 T TENSOR REMARK 3 T11: 0.3161 T22: 0.2882 REMARK 3 T33: 0.1246 T12: -0.1132 REMARK 3 T13: 0.0541 T23: 0.0113 REMARK 3 L TENSOR REMARK 3 L11: 4.0488 L22: 3.9239 REMARK 3 L33: 3.2260 L12: 0.4809 REMARK 3 L13: 1.1575 L23: 0.2389 REMARK 3 S TENSOR REMARK 3 S11: -0.0596 S12: 0.3751 S13: -0.2471 REMARK 3 S21: -0.2492 S22: 0.1256 S23: -0.0025 REMARK 3 S31: 0.3820 S32: -0.4675 S33: -0.0721 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 25 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.0501 14.3882 -16.2880 REMARK 3 T TENSOR REMARK 3 T11: 0.1620 T22: 0.1549 REMARK 3 T33: 0.1110 T12: -0.0106 REMARK 3 T13: 0.0077 T23: 0.0088 REMARK 3 L TENSOR REMARK 3 L11: 2.6986 L22: 3.4640 REMARK 3 L33: 3.7059 L12: 1.3433 REMARK 3 L13: -0.4527 L23: -0.6899 REMARK 3 S TENSOR REMARK 3 S11: -0.1125 S12: 0.2196 S13: -0.0546 REMARK 3 S21: -0.1053 S22: 0.0920 S23: -0.0852 REMARK 3 S31: 0.1380 S32: 0.0286 S33: 0.0128 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 81 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.7121 11.3208 -11.6985 REMARK 3 T TENSOR REMARK 3 T11: 0.1774 T22: 0.2598 REMARK 3 T33: 0.2706 T12: 0.0315 REMARK 3 T13: -0.0115 T23: 0.0635 REMARK 3 L TENSOR REMARK 3 L11: 6.0008 L22: 5.7964 REMARK 3 L33: 8.8460 L12: 0.3372 REMARK 3 L13: -1.8821 L23: -0.7797 REMARK 3 S TENSOR REMARK 3 S11: -0.1428 S12: -0.2147 S13: -0.3377 REMARK 3 S21: -0.0908 S22: -0.0379 S23: -0.5774 REMARK 3 S31: 0.2278 S32: 0.7319 S33: 0.0941 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 105 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.9775 14.3923 -23.0074 REMARK 3 T TENSOR REMARK 3 T11: 0.3267 T22: 0.5138 REMARK 3 T33: 0.1899 T12: -0.0726 REMARK 3 T13: -0.0305 T23: 0.0878 REMARK 3 L TENSOR REMARK 3 L11: 4.8446 L22: 2.2444 REMARK 3 L33: 2.6116 L12: 0.1956 REMARK 3 L13: -0.0243 L23: -0.9095 REMARK 3 S TENSOR REMARK 3 S11: -0.2093 S12: 0.6403 S13: 0.1647 REMARK 3 S21: -0.2382 S22: 0.3414 S23: 0.2991 REMARK 3 S31: 0.2043 S32: -0.7794 S33: -0.1565 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 129 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.5539 12.7009 -6.4082 REMARK 3 T TENSOR REMARK 3 T11: 0.2652 T22: 0.4947 REMARK 3 T33: 0.2892 T12: 0.0122 REMARK 3 T13: 0.0457 T23: 0.0888 REMARK 3 L TENSOR REMARK 3 L11: 2.5055 L22: 1.8196 REMARK 3 L33: 2.9244 L12: 0.7215 REMARK 3 L13: -0.4223 L23: -0.2409 REMARK 3 S TENSOR REMARK 3 S11: -0.0066 S12: 0.3535 S13: 0.2025 REMARK 3 S21: 0.0965 S22: 0.2128 S23: 0.5064 REMARK 3 S31: -0.1488 S32: -1.0965 S33: -0.1475 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 198 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.7528 15.4811 -13.6309 REMARK 3 T TENSOR REMARK 3 T11: 0.2999 T22: 0.7339 REMARK 3 T33: 0.3169 T12: 0.0435 REMARK 3 T13: 0.0078 T23: 0.1288 REMARK 3 L TENSOR REMARK 3 L11: 2.0393 L22: 2.2233 REMARK 3 L33: 0.6559 L12: 0.6363 REMARK 3 L13: 0.1018 L23: -0.2400 REMARK 3 S TENSOR REMARK 3 S11: 0.0237 S12: 0.4855 S13: 0.3843 REMARK 3 S21: 0.0242 S22: 0.2013 S23: 0.5487 REMARK 3 S31: -0.1557 S32: -1.4772 S33: -0.1510 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.6891 12.5592 23.4429 REMARK 3 T TENSOR REMARK 3 T11: 0.0850 T22: 0.1158 REMARK 3 T33: 0.0921 T12: 0.0211 REMARK 3 T13: -0.0061 T23: -0.0644 REMARK 3 L TENSOR REMARK 3 L11: 3.5418 L22: 6.8047 REMARK 3 L33: 5.6473 L12: 0.1909 REMARK 3 L13: 0.2270 L23: -4.1556 REMARK 3 S TENSOR REMARK 3 S11: 0.1392 S12: -0.0790 S13: -0.0548 REMARK 3 S21: -0.1168 S22: 0.0212 S23: 0.3696 REMARK 3 S31: 0.1925 S32: -0.1054 S33: -0.2184 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 25 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.2944 19.9102 29.8410 REMARK 3 T TENSOR REMARK 3 T11: 0.2194 T22: 0.1666 REMARK 3 T33: 0.2285 T12: 0.0298 REMARK 3 T13: 0.0280 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 5.0059 L22: 4.3135 REMARK 3 L33: 6.1013 L12: 2.5801 REMARK 3 L13: -3.3260 L23: -3.8905 REMARK 3 S TENSOR REMARK 3 S11: 0.0161 S12: -0.2227 S13: 0.0751 REMARK 3 S21: 0.2567 S22: -0.0315 S23: 0.1660 REMARK 3 S31: -0.0695 S32: -0.0040 S33: 0.0273 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 43 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.0556 27.2669 26.6314 REMARK 3 T TENSOR REMARK 3 T11: 0.2022 T22: 0.1943 REMARK 3 T33: 0.2344 T12: 0.0498 REMARK 3 T13: 0.0295 T23: -0.0206 REMARK 3 L TENSOR REMARK 3 L11: 1.3758 L22: 6.1043 REMARK 3 L33: 1.0979 L12: 1.5892 REMARK 3 L13: 0.8854 L23: -0.3539 REMARK 3 S TENSOR REMARK 3 S11: 0.0511 S12: -0.1547 S13: 0.2768 REMARK 3 S21: 0.2102 S22: -0.0186 S23: 0.4715 REMARK 3 S31: -0.1101 S32: -0.0928 S33: -0.0570 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 61 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.4900 31.5148 25.2971 REMARK 3 T TENSOR REMARK 3 T11: 0.2139 T22: 0.1100 REMARK 3 T33: 0.2364 T12: 0.0147 REMARK 3 T13: 0.0015 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 3.6828 L22: 3.7131 REMARK 3 L33: 3.5155 L12: -0.8197 REMARK 3 L13: -0.4388 L23: 0.6571 REMARK 3 S TENSOR REMARK 3 S11: -0.0032 S12: 0.0295 S13: 0.2970 REMARK 3 S21: 0.0844 S22: -0.0475 S23: 0.2353 REMARK 3 S31: -0.2508 S32: -0.2334 S33: 0.0371 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 105 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.1431 21.9345 35.6110 REMARK 3 T TENSOR REMARK 3 T11: 0.2748 T22: 0.2030 REMARK 3 T33: 0.2092 T12: -0.0093 REMARK 3 T13: 0.0152 T23: -0.0091 REMARK 3 L TENSOR REMARK 3 L11: 9.9376 L22: 6.1288 REMARK 3 L33: 2.1053 L12: -6.2462 REMARK 3 L13: 1.7714 L23: -0.5502 REMARK 3 S TENSOR REMARK 3 S11: -0.3731 S12: -0.5168 S13: 0.1036 REMARK 3 S21: 0.5769 S22: 0.3045 S23: -0.0499 REMARK 3 S31: -0.1021 S32: -0.0988 S33: 0.0876 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 119 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.3158 8.0639 35.3103 REMARK 3 T TENSOR REMARK 3 T11: 0.2395 T22: 0.2261 REMARK 3 T33: 0.1771 T12: 0.0144 REMARK 3 T13: -0.0282 T23: 0.0170 REMARK 3 L TENSOR REMARK 3 L11: 9.0310 L22: 3.2918 REMARK 3 L33: 6.1575 L12: 2.0077 REMARK 3 L13: -6.6165 L23: 0.3539 REMARK 3 S TENSOR REMARK 3 S11: -0.0210 S12: -0.2510 S13: -0.3000 REMARK 3 S21: 0.3227 S22: 0.0070 S23: -0.2027 REMARK 3 S31: 0.2275 S32: 0.2081 S33: 0.0342 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 130 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.7317 8.6833 18.9651 REMARK 3 T TENSOR REMARK 3 T11: 0.1382 T22: 0.1591 REMARK 3 T33: 0.1857 T12: 0.0122 REMARK 3 T13: -0.0077 T23: 0.0069 REMARK 3 L TENSOR REMARK 3 L11: 1.9487 L22: 2.4705 REMARK 3 L33: 2.6115 L12: 0.0410 REMARK 3 L13: -0.3873 L23: 0.2629 REMARK 3 S TENSOR REMARK 3 S11: 0.0157 S12: 0.0825 S13: -0.0344 REMARK 3 S21: -0.0441 S22: -0.0266 S23: -0.0788 REMARK 3 S31: 0.0650 S32: 0.0564 S33: 0.0135 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 198 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6180 10.9335 26.4600 REMARK 3 T TENSOR REMARK 3 T11: 0.1487 T22: 0.1152 REMARK 3 T33: 0.1555 T12: -0.0102 REMARK 3 T13: 0.0048 T23: 0.0203 REMARK 3 L TENSOR REMARK 3 L11: 2.9037 L22: 2.4122 REMARK 3 L33: 1.3579 L12: -0.9688 REMARK 3 L13: -0.0706 L23: 0.4287 REMARK 3 S TENSOR REMARK 3 S11: 0.0296 S12: -0.0577 S13: 0.0391 REMARK 3 S21: 0.1650 S22: 0.0098 S23: -0.0655 REMARK 3 S31: -0.0119 S32: 0.0616 S33: -0.0273 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ZXA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1292123173. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, DESY REMARK 200 BEAMLINE : P11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 97574 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 49.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.6 REMARK 200 DATA REDUNDANCY : 11.20 REMARK 200 R MERGE (I) : 0.13680 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.2800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.9 REMARK 200 DATA REDUNDANCY IN SHELL : 11.10 REMARK 200 R MERGE FOR SHELL (I) : 2.23200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.030 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 7Z58 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MATURE CATHEPSIN L AT A CONCENTRATION REMARK 280 OF 7 MG/ML WAS EQUILIBRATED AGAINST 27% W/V PEG 8000, 1 MM TCEP REMARK 280 AND 0.1 M SODIUM ACETATE AT PH 4.0. CRYSTALS, WHICH GREW AT 293 REMARK 280 K TO FINAL SIZE AFTER APPROXIMATELY 3 DAYS, WERE TRANSFERRED TO REMARK 280 A COMPOUND SOAKING SOLUTION CONTAINING 22% W/V PEG 8000, 1 MM REMARK 280 TCEP AND 0.1 M SODIUM ACETATE AT PH 4.0 AS WELL AS 5% V/V DMSO REMARK 280 AND 10% V/V PEG 400., VAPOR DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA C 1 REMARK 465 THR C 175 REMARK 465 GLU C 176 REMARK 465 SER C 177 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 205 60.21 -114.28 REMARK 500 ARG A 205 59.44 -114.28 REMARK 500 ALA A 214 59.24 -147.95 REMARK 500 GLN B 21 47.56 -94.08 REMARK 500 ARG B 205 66.52 -118.08 REMARK 500 CYS B 209 16.63 59.80 REMARK 500 ALA B 214 56.11 -153.43 REMARK 500 GLN C 21 57.90 -101.00 REMARK 500 ARG C 205 60.23 -119.97 REMARK 500 ARG C 205 60.86 -119.97 REMARK 500 ALA C 214 63.27 -155.01 REMARK 500 GLN D 21 56.45 -100.36 REMARK 500 SER D 174 -166.02 62.98 REMARK 500 ARG D 205 54.42 -115.70 REMARK 500 ALA D 214 59.95 -149.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7ZS7 RELATED DB: PDB REMARK 900 RELATED ID: 7ZVF RELATED DB: PDB DBREF 7ZXA A 1 220 UNP P07711 CATL1_HUMAN 114 333 DBREF 7ZXA B 1 220 UNP P07711 CATL1_HUMAN 114 333 DBREF 7ZXA C 1 220 UNP P07711 CATL1_HUMAN 114 333 DBREF 7ZXA D 1 220 UNP P07711 CATL1_HUMAN 114 333 SEQADV 7ZXA ALA A 110 UNP P07711 THR 223 ENGINEERED MUTATION SEQADV 7ZXA ALA B 110 UNP P07711 THR 223 ENGINEERED MUTATION SEQADV 7ZXA ALA C 110 UNP P07711 THR 223 ENGINEERED MUTATION SEQADV 7ZXA ALA D 110 UNP P07711 THR 223 ENGINEERED MUTATION SEQRES 1 A 220 ALA PRO ARG SER VAL ASP TRP ARG GLU LYS GLY TYR VAL SEQRES 2 A 220 THR PRO VAL LYS ASN GLN GLY GLN CYS GLY SER CYS TRP SEQRES 3 A 220 ALA PHE SER ALA THR GLY ALA LEU GLU GLY GLN MET PHE SEQRES 4 A 220 ARG LYS THR GLY ARG LEU ILE SER LEU SER GLU GLN ASN SEQRES 5 A 220 LEU VAL ASP CYS SER GLY PRO GLN GLY ASN GLU GLY CYS SEQRES 6 A 220 ASN GLY GLY LEU MET ASP TYR ALA PHE GLN TYR VAL GLN SEQRES 7 A 220 ASP ASN GLY GLY LEU ASP SER GLU GLU SER TYR PRO TYR SEQRES 8 A 220 GLU ALA THR GLU GLU SER CYS LYS TYR ASN PRO LYS TYR SEQRES 9 A 220 SER VAL ALA ASN ASP ALA GLY PHE VAL ASP ILE PRO LYS SEQRES 10 A 220 GLN GLU LYS ALA LEU MET LYS ALA VAL ALA THR VAL GLY SEQRES 11 A 220 PRO ILE SER VAL ALA ILE ASP ALA GLY HIS GLU SER PHE SEQRES 12 A 220 LEU PHE TYR LYS GLU GLY ILE TYR PHE GLU PRO ASP CYS SEQRES 13 A 220 SER SER GLU ASP MET ASP HIS GLY VAL LEU VAL VAL GLY SEQRES 14 A 220 TYR GLY PHE GLU SER THR GLU SER ASP ASN ASN LYS TYR SEQRES 15 A 220 TRP LEU VAL LYS ASN SER TRP GLY GLU GLU TRP GLY MET SEQRES 16 A 220 GLY GLY TYR VAL LYS MET ALA LYS ASP ARG ARG ASN HIS SEQRES 17 A 220 CYS GLY ILE ALA SER ALA ALA SER TYR PRO THR VAL SEQRES 1 B 220 ALA PRO ARG SER VAL ASP TRP ARG GLU LYS GLY TYR VAL SEQRES 2 B 220 THR PRO VAL LYS ASN GLN GLY GLN CYS GLY SER CYS TRP SEQRES 3 B 220 ALA PHE SER ALA THR GLY ALA LEU GLU GLY GLN MET PHE SEQRES 4 B 220 ARG LYS THR GLY ARG LEU ILE SER LEU SER GLU GLN ASN SEQRES 5 B 220 LEU VAL ASP CYS SER GLY PRO GLN GLY ASN GLU GLY CYS SEQRES 6 B 220 ASN GLY GLY LEU MET ASP TYR ALA PHE GLN TYR VAL GLN SEQRES 7 B 220 ASP ASN GLY GLY LEU ASP SER GLU GLU SER TYR PRO TYR SEQRES 8 B 220 GLU ALA THR GLU GLU SER CYS LYS TYR ASN PRO LYS TYR SEQRES 9 B 220 SER VAL ALA ASN ASP ALA GLY PHE VAL ASP ILE PRO LYS SEQRES 10 B 220 GLN GLU LYS ALA LEU MET LYS ALA VAL ALA THR VAL GLY SEQRES 11 B 220 PRO ILE SER VAL ALA ILE ASP ALA GLY HIS GLU SER PHE SEQRES 12 B 220 LEU PHE TYR LYS GLU GLY ILE TYR PHE GLU PRO ASP CYS SEQRES 13 B 220 SER SER GLU ASP MET ASP HIS GLY VAL LEU VAL VAL GLY SEQRES 14 B 220 TYR GLY PHE GLU SER THR GLU SER ASP ASN ASN LYS TYR SEQRES 15 B 220 TRP LEU VAL LYS ASN SER TRP GLY GLU GLU TRP GLY MET SEQRES 16 B 220 GLY GLY TYR VAL LYS MET ALA LYS ASP ARG ARG ASN HIS SEQRES 17 B 220 CYS GLY ILE ALA SER ALA ALA SER TYR PRO THR VAL SEQRES 1 C 220 ALA PRO ARG SER VAL ASP TRP ARG GLU LYS GLY TYR VAL SEQRES 2 C 220 THR PRO VAL LYS ASN GLN GLY GLN CYS GLY SER CYS TRP SEQRES 3 C 220 ALA PHE SER ALA THR GLY ALA LEU GLU GLY GLN MET PHE SEQRES 4 C 220 ARG LYS THR GLY ARG LEU ILE SER LEU SER GLU GLN ASN SEQRES 5 C 220 LEU VAL ASP CYS SER GLY PRO GLN GLY ASN GLU GLY CYS SEQRES 6 C 220 ASN GLY GLY LEU MET ASP TYR ALA PHE GLN TYR VAL GLN SEQRES 7 C 220 ASP ASN GLY GLY LEU ASP SER GLU GLU SER TYR PRO TYR SEQRES 8 C 220 GLU ALA THR GLU GLU SER CYS LYS TYR ASN PRO LYS TYR SEQRES 9 C 220 SER VAL ALA ASN ASP ALA GLY PHE VAL ASP ILE PRO LYS SEQRES 10 C 220 GLN GLU LYS ALA LEU MET LYS ALA VAL ALA THR VAL GLY SEQRES 11 C 220 PRO ILE SER VAL ALA ILE ASP ALA GLY HIS GLU SER PHE SEQRES 12 C 220 LEU PHE TYR LYS GLU GLY ILE TYR PHE GLU PRO ASP CYS SEQRES 13 C 220 SER SER GLU ASP MET ASP HIS GLY VAL LEU VAL VAL GLY SEQRES 14 C 220 TYR GLY PHE GLU SER THR GLU SER ASP ASN ASN LYS TYR SEQRES 15 C 220 TRP LEU VAL LYS ASN SER TRP GLY GLU GLU TRP GLY MET SEQRES 16 C 220 GLY GLY TYR VAL LYS MET ALA LYS ASP ARG ARG ASN HIS SEQRES 17 C 220 CYS GLY ILE ALA SER ALA ALA SER TYR PRO THR VAL SEQRES 1 D 220 ALA PRO ARG SER VAL ASP TRP ARG GLU LYS GLY TYR VAL SEQRES 2 D 220 THR PRO VAL LYS ASN GLN GLY GLN CYS GLY SER CYS TRP SEQRES 3 D 220 ALA PHE SER ALA THR GLY ALA LEU GLU GLY GLN MET PHE SEQRES 4 D 220 ARG LYS THR GLY ARG LEU ILE SER LEU SER GLU GLN ASN SEQRES 5 D 220 LEU VAL ASP CYS SER GLY PRO GLN GLY ASN GLU GLY CYS SEQRES 6 D 220 ASN GLY GLY LEU MET ASP TYR ALA PHE GLN TYR VAL GLN SEQRES 7 D 220 ASP ASN GLY GLY LEU ASP SER GLU GLU SER TYR PRO TYR SEQRES 8 D 220 GLU ALA THR GLU GLU SER CYS LYS TYR ASN PRO LYS TYR SEQRES 9 D 220 SER VAL ALA ASN ASP ALA GLY PHE VAL ASP ILE PRO LYS SEQRES 10 D 220 GLN GLU LYS ALA LEU MET LYS ALA VAL ALA THR VAL GLY SEQRES 11 D 220 PRO ILE SER VAL ALA ILE ASP ALA GLY HIS GLU SER PHE SEQRES 12 D 220 LEU PHE TYR LYS GLU GLY ILE TYR PHE GLU PRO ASP CYS SEQRES 13 D 220 SER SER GLU ASP MET ASP HIS GLY VAL LEU VAL VAL GLY SEQRES 14 D 220 TYR GLY PHE GLU SER THR GLU SER ASP ASN ASN LYS TYR SEQRES 15 D 220 TRP LEU VAL LYS ASN SER TRP GLY GLU GLU TRP GLY MET SEQRES 16 D 220 GLY GLY TYR VAL LYS MET ALA LYS ASP ARG ARG ASN HIS SEQRES 17 D 220 CYS GLY ILE ALA SER ALA ALA SER TYR PRO THR VAL HET E6D A 301 55 HET 1PE A 302 38 HET PG4 A 303 31 HET DMS A 304 10 HET PEG A 305 17 HET PGE A 306 24 HET PGE A 307 24 HET EDO A 308 10 HET E6D B 301 55 HET DMS B 302 10 HET DMS B 303 10 HET PEG B 304 17 HET PEG B 305 17 HET PEG B 306 17 HET EDO B 307 10 HET E6D C 301 55 HET PEG C 302 17 HET PEG C 303 17 HET PEG C 304 17 HET PGE C 305 24 HET EDO C 306 10 HET EDO C 307 10 HET DMS D 501 10 HET E6D D 502 55 HET DMS D 503 10 HET P6G D 504 45 HET PG4 D 505 31 HET PEG D 506 17 HET PGE D 507 24 HET EDO D 508 10 HETNAM E6D ETHYL (3S)-3-HYDROXY-4-({(2S)-4-METHYL-1-[(3- HETNAM 2 E6D METHYLBUTYL)AMINO]-1-OXOPENTAN-2-YL}AMINO)-4- HETNAM 3 E6D OXOBUTANOATE HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM DMS DIMETHYL SULFOXIDE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PGE TRIETHYLENE GLYCOL HETNAM EDO 1,2-ETHANEDIOL HETNAM P6G HEXAETHYLENE GLYCOL HETSYN 1PE PEG400 HETSYN EDO ETHYLENE GLYCOL HETSYN P6G POLYETHYLENE GLYCOL PEG400 FORMUL 5 E6D 4(C17 H32 N2 O5) FORMUL 6 1PE C10 H22 O6 FORMUL 7 PG4 2(C8 H18 O5) FORMUL 8 DMS 5(C2 H6 O S) FORMUL 9 PEG 8(C4 H10 O3) FORMUL 10 PGE 4(C6 H14 O4) FORMUL 12 EDO 5(C2 H6 O2) FORMUL 30 P6G C12 H26 O7 FORMUL 35 HOH *647(H2 O) HELIX 1 AA1 ARG A 8 GLY A 11 5 4 HELIX 2 AA2 SER A 24 GLY A 43 1 20 HELIX 3 AA3 SER A 49 SER A 57 1 9 HELIX 4 AA4 GLY A 58 GLY A 61 5 4 HELIX 5 AA5 GLU A 63 GLY A 67 5 5 HELIX 6 AA6 LEU A 69 GLY A 81 1 13 HELIX 7 AA7 ASN A 101 LYS A 103 5 3 HELIX 8 AA8 GLN A 118 VAL A 129 1 12 HELIX 9 AA9 HIS A 140 PHE A 145 1 6 HELIX 10 AB1 ASN A 207 ILE A 211 5 5 HELIX 11 AB2 ARG B 8 GLY B 11 5 4 HELIX 12 AB3 SER B 24 GLY B 43 1 20 HELIX 13 AB4 SER B 49 SER B 57 1 9 HELIX 14 AB5 GLY B 58 GLY B 61 5 4 HELIX 15 AB6 GLU B 63 GLY B 67 5 5 HELIX 16 AB7 LEU B 69 GLY B 81 1 13 HELIX 17 AB8 ASN B 101 LYS B 103 5 3 HELIX 18 AB9 GLN B 118 VAL B 129 1 12 HELIX 19 AC1 HIS B 140 PHE B 145 1 6 HELIX 20 AC2 ASN B 207 ILE B 211 5 5 HELIX 21 AC3 ARG C 8 GLY C 11 5 4 HELIX 22 AC4 SER C 24 GLY C 43 1 20 HELIX 23 AC5 SER C 49 SER C 57 1 9 HELIX 24 AC6 GLY C 58 GLY C 61 5 4 HELIX 25 AC7 GLU C 63 GLY C 67 5 5 HELIX 26 AC8 LEU C 69 GLY C 81 1 13 HELIX 27 AC9 ASN C 101 LYS C 103 5 3 HELIX 28 AD1 GLN C 118 GLY C 130 1 13 HELIX 29 AD2 HIS C 140 PHE C 145 1 6 HELIX 30 AD3 ASN C 207 ILE C 211 5 5 HELIX 31 AD4 ARG D 8 GLY D 11 5 4 HELIX 32 AD5 SER D 24 GLY D 43 1 20 HELIX 33 AD6 SER D 49 SER D 57 1 9 HELIX 34 AD7 GLY D 58 GLY D 61 5 4 HELIX 35 AD8 GLU D 63 GLY D 67 5 5 HELIX 36 AD9 LEU D 69 GLY D 81 1 13 HELIX 37 AE1 ASN D 101 LYS D 103 5 3 HELIX 38 AE2 GLN D 118 VAL D 129 1 12 HELIX 39 AE3 HIS D 140 PHE D 145 1 6 HELIX 40 AE4 THR D 175 ASN D 179 5 5 HELIX 41 AE5 ASN D 207 ILE D 211 5 5 SHEET 1 AA1 3 VAL A 5 ASP A 6 0 SHEET 2 AA1 3 HIS A 163 PHE A 172 -1 O TYR A 170 N VAL A 5 SHEET 3 AA1 3 ILE A 132 ILE A 136 -1 N VAL A 134 O VAL A 165 SHEET 1 AA2 5 VAL A 5 ASP A 6 0 SHEET 2 AA2 5 HIS A 163 PHE A 172 -1 O TYR A 170 N VAL A 5 SHEET 3 AA2 5 LYS A 181 LYS A 186 -1 O LYS A 186 N LEU A 166 SHEET 4 AA2 5 TYR A 198 ALA A 202 -1 O MET A 201 N TRP A 183 SHEET 5 AA2 5 ILE A 150 TYR A 151 1 N TYR A 151 O LYS A 200 SHEET 1 AA3 2 LEU A 83 ASP A 84 0 SHEET 2 AA3 2 SER A 105 ALA A 107 -1 O VAL A 106 N LEU A 83 SHEET 1 AA4 2 PHE A 112 ASP A 114 0 SHEET 2 AA4 2 SER A 216 PRO A 218 -1 O TYR A 217 N VAL A 113 SHEET 1 AA5 3 VAL B 5 ASP B 6 0 SHEET 2 AA5 3 HIS B 163 GLY B 171 -1 O TYR B 170 N VAL B 5 SHEET 3 AA5 3 ILE B 132 ILE B 136 -1 N ILE B 132 O VAL B 167 SHEET 1 AA6 5 VAL B 5 ASP B 6 0 SHEET 2 AA6 5 HIS B 163 GLY B 171 -1 O TYR B 170 N VAL B 5 SHEET 3 AA6 5 TYR B 182 LYS B 186 -1 O LYS B 186 N LEU B 166 SHEET 4 AA6 5 TYR B 198 ALA B 202 -1 O MET B 201 N TRP B 183 SHEET 5 AA6 5 ILE B 150 TYR B 151 1 N TYR B 151 O LYS B 200 SHEET 1 AA7 2 LEU B 83 ASP B 84 0 SHEET 2 AA7 2 SER B 105 ALA B 107 -1 O VAL B 106 N LEU B 83 SHEET 1 AA8 2 PHE B 112 ASP B 114 0 SHEET 2 AA8 2 SER B 216 PRO B 218 -1 O TYR B 217 N VAL B 113 SHEET 1 AA9 3 VAL C 5 ASP C 6 0 SHEET 2 AA9 3 HIS C 163 GLY C 171 -1 O TYR C 170 N VAL C 5 SHEET 3 AA9 3 ILE C 132 ILE C 136 -1 N VAL C 134 O VAL C 165 SHEET 1 AB1 5 VAL C 5 ASP C 6 0 SHEET 2 AB1 5 HIS C 163 GLY C 171 -1 O TYR C 170 N VAL C 5 SHEET 3 AB1 5 TYR C 182 LYS C 186 -1 O LYS C 186 N LEU C 166 SHEET 4 AB1 5 TYR C 198 ALA C 202 -1 O MET C 201 N TRP C 183 SHEET 5 AB1 5 ILE C 150 TYR C 151 1 N TYR C 151 O LYS C 200 SHEET 1 AB2 2 LEU C 83 ASP C 84 0 SHEET 2 AB2 2 SER C 105 ALA C 107 -1 O VAL C 106 N LEU C 83 SHEET 1 AB3 2 PHE C 112 ASP C 114 0 SHEET 2 AB3 2 SER C 216 PRO C 218 -1 O TYR C 217 N VAL C 113 SHEET 1 AB4 3 VAL D 5 ASP D 6 0 SHEET 2 AB4 3 HIS D 163 PHE D 172 -1 O TYR D 170 N VAL D 5 SHEET 3 AB4 3 ILE D 132 ILE D 136 -1 N ILE D 132 O VAL D 167 SHEET 1 AB5 5 VAL D 5 ASP D 6 0 SHEET 2 AB5 5 HIS D 163 PHE D 172 -1 O TYR D 170 N VAL D 5 SHEET 3 AB5 5 LYS D 181 LYS D 186 -1 O LYS D 186 N LEU D 166 SHEET 4 AB5 5 TYR D 198 ALA D 202 -1 O MET D 201 N TRP D 183 SHEET 5 AB5 5 ILE D 150 TYR D 151 1 N TYR D 151 O LYS D 200 SHEET 1 AB6 2 LEU D 83 ASP D 84 0 SHEET 2 AB6 2 SER D 105 ALA D 107 -1 O VAL D 106 N LEU D 83 SHEET 1 AB7 2 PHE D 112 ASP D 114 0 SHEET 2 AB7 2 SER D 216 PRO D 218 -1 O TYR D 217 N VAL D 113 SSBOND 1 CYS A 22 CYS A 65 1555 1555 2.10 SSBOND 2 CYS A 56 CYS A 98 1555 1555 2.03 SSBOND 3 CYS A 156 CYS A 209 1555 1555 2.02 SSBOND 4 CYS B 22 CYS B 65 1555 1555 2.04 SSBOND 5 CYS B 56 CYS B 98 1555 1555 2.04 SSBOND 6 CYS B 156 CYS B 209 1555 1555 2.03 SSBOND 7 CYS C 22 CYS C 65 1555 1555 2.03 SSBOND 8 CYS C 56 CYS C 98 1555 1555 2.03 SSBOND 9 CYS C 156 CYS C 209 1555 1555 2.04 SSBOND 10 CYS D 22 CYS D 65 1555 1555 2.03 SSBOND 11 CYS D 56 CYS D 98 1555 1555 2.04 SSBOND 12 CYS D 156 CYS D 209 1555 1555 2.02 LINK SG CYS A 25 C2 E6D A 301 1555 1555 1.84 LINK SG CYS B 25 C2 E6D B 301 1555 1555 1.82 LINK SG CYS C 25 C2 E6D C 301 1555 1555 1.88 LINK SG CYS D 25 C2 E6D D 502 1555 1555 1.85 CRYST1 57.070 62.260 67.420 105.27 93.74 115.78 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017522 0.008465 0.004116 0.00000 SCALE2 0.000000 0.017838 0.006123 0.00000 SCALE3 0.000000 0.000000 0.015715 0.00000