HEADER VIRAL PROTEIN 23-MAY-22 7ZXU TITLE SARS-COV-2 OMICRON BA.4/5 RBD IN COMPLEX WITH BETA-27 FAB AND C1 TITLE 2 NANOBODY COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S1; COMPND 3 CHAIN: E; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: NANOBODY C1; COMPND 7 CHAIN: A; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: BETA-27 HEAVY CHAIN; COMPND 11 CHAIN: H; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: BETA-27 LIGHT CHAIN; COMPND 15 CHAIN: L; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_TAXID: 2697049; SOURCE 5 GENE: S, 2; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 10 ORGANISM_TAXID: 9844; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 18 MOL_ID: 4; SOURCE 19 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 20 ORGANISM_TAXID: 9606; SOURCE 21 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS SARS-COV-2, OMICRON BA.4, BA.5, RBD, ANTIBODY, FAB, BETA-27, VIRAL KEYWDS 2 PROTEIN/IMMUNE SYSTEM, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.HUO,D.ZHOU,J.REN,D.I.STUART REVDAT 4 31-JAN-24 7ZXU 1 REMARK REVDAT 3 20-JUL-22 7ZXU 1 JRNL REVDAT 2 13-JUL-22 7ZXU 1 JRNL REVDAT 1 29-JUN-22 7ZXU 0 JRNL AUTH A.TUEKPRAKHON,R.NUTALAI,A.DIJOKAITE-GURALIUC,D.ZHOU, JRNL AUTH 2 H.M.GINN,M.SELVARAJ,C.LIU,A.J.MENTZER,P.SUPASA, JRNL AUTH 3 H.M.E.DUYVESTEYN,R.DAS,D.SKELLY,T.G.RITTER,A.AMINI,S.BIBI, JRNL AUTH 4 S.ADELE,S.A.JOHNSON,B.CONSTANTINIDES,H.WEBSTER,N.TEMPERTON, JRNL AUTH 5 P.KLENERMAN,E.BARNES,S.J.DUNACHIE,D.CROOK,A.J.POLLARD, JRNL AUTH 6 T.LAMBE,P.GOULDER,N.G.PATERSON,M.A.WILLIAMS,D.R.HALL, JRNL AUTH 7 E.E.FRY,J.HUO,J.MONGKOLSAPAYA,J.REN,D.I.STUART,G.R.SCREATON JRNL TITL ANTIBODY ESCAPE OF SARS-COV-2 OMICRON BA.4 AND BA.5 FROM JRNL TITL 2 VACCINE AND BA.1 SERUM. JRNL REF CELL V. 185 2422 2022 JRNL REFN ISSN 1097-4172 JRNL PMID 35772405 JRNL DOI 10.1016/J.CELL.2022.06.005 REMARK 2 REMARK 2 RESOLUTION. 1.89 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.89 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.75 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 72042 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.210 REMARK 3 FREE R VALUE TEST SET COUNT : 3756 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 65.7500 - 5.6700 1.00 2743 140 0.1907 0.1866 REMARK 3 2 5.6700 - 4.5000 1.00 2611 145 0.1414 0.1711 REMARK 3 3 4.5000 - 3.9300 1.00 2607 113 0.1355 0.1549 REMARK 3 4 3.9300 - 3.5700 1.00 2540 166 0.1502 0.1635 REMARK 3 5 3.5700 - 3.3200 1.00 2547 152 0.1520 0.1635 REMARK 3 6 3.3200 - 3.1200 1.00 2526 145 0.1633 0.2017 REMARK 3 7 3.1200 - 2.9600 1.00 2549 136 0.1666 0.1861 REMARK 3 8 2.9600 - 2.8400 1.00 2558 129 0.1680 0.2470 REMARK 3 9 2.8400 - 2.7300 1.00 2528 129 0.1761 0.1907 REMARK 3 10 2.7300 - 2.6300 1.00 2524 135 0.1859 0.2182 REMARK 3 11 2.6300 - 2.5500 1.00 2495 148 0.1891 0.2394 REMARK 3 12 2.5500 - 2.4800 1.00 2533 134 0.1889 0.2584 REMARK 3 13 2.4800 - 2.4100 1.00 2527 140 0.1952 0.2466 REMARK 3 14 2.4100 - 2.3500 1.00 2523 130 0.2021 0.2494 REMARK 3 15 2.3500 - 2.3000 1.00 2479 154 0.2108 0.2444 REMARK 3 16 2.3000 - 2.2500 1.00 2498 163 0.2084 0.2511 REMARK 3 17 2.2500 - 2.2100 1.00 2474 143 0.2199 0.2687 REMARK 3 18 2.2100 - 2.1600 1.00 2519 156 0.2297 0.2717 REMARK 3 19 2.1600 - 2.1300 1.00 2509 146 0.2258 0.2480 REMARK 3 20 2.1300 - 2.0900 1.00 2506 128 0.2419 0.2771 REMARK 3 21 2.0900 - 2.0600 1.00 2499 129 0.2479 0.3150 REMARK 3 22 2.0600 - 2.0200 1.00 2486 143 0.2616 0.2966 REMARK 3 23 2.0200 - 1.9900 1.00 2506 144 0.2638 0.2982 REMARK 3 24 1.9900 - 1.9700 1.00 2509 124 0.2805 0.3105 REMARK 3 25 1.9700 - 1.9400 1.00 2508 122 0.2860 0.2804 REMARK 3 26 1.9400 - 1.9100 1.00 2487 147 0.3023 0.3362 REMARK 3 27 1.9100 - 1.8900 0.99 2495 115 0.3287 0.3603 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.897 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.82 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 6050 REMARK 3 ANGLE : 0.539 8212 REMARK 3 CHIRALITY : 0.044 892 REMARK 3 PLANARITY : 0.004 1054 REMARK 3 DIHEDRAL : 11.700 2168 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 26 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 333 THROUGH 364 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.7099 -32.1442 14.0590 REMARK 3 T TENSOR REMARK 3 T11: 0.4734 T22: 0.3380 REMARK 3 T33: 0.2303 T12: 0.0546 REMARK 3 T13: -0.0310 T23: 0.0490 REMARK 3 L TENSOR REMARK 3 L11: 2.9419 L22: 1.5322 REMARK 3 L33: 4.6260 L12: -0.4105 REMARK 3 L13: -1.0763 L23: 0.8421 REMARK 3 S TENSOR REMARK 3 S11: -0.1819 S12: -0.7439 S13: -0.1788 REMARK 3 S21: 0.7367 S22: 0.0288 S23: -0.0123 REMARK 3 S31: 0.0061 S32: 0.0806 S33: 0.1162 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 365 THROUGH 421 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.8170 -24.3550 6.5691 REMARK 3 T TENSOR REMARK 3 T11: 0.3135 T22: 0.2070 REMARK 3 T33: 0.1966 T12: -0.0225 REMARK 3 T13: 0.0030 T23: -0.0268 REMARK 3 L TENSOR REMARK 3 L11: 2.7134 L22: 1.9485 REMARK 3 L33: 3.0913 L12: -0.8673 REMARK 3 L13: -0.6644 L23: -0.2811 REMARK 3 S TENSOR REMARK 3 S11: -0.0508 S12: -0.3346 S13: 0.2152 REMARK 3 S21: 0.5121 S22: 0.0967 S23: -0.0578 REMARK 3 S31: -0.1991 S32: 0.0025 S33: -0.0414 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 422 THROUGH 459 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.8157 -31.0234 -1.7648 REMARK 3 T TENSOR REMARK 3 T11: 0.2640 T22: 0.1868 REMARK 3 T33: 0.1956 T12: -0.0172 REMARK 3 T13: -0.0115 T23: 0.0308 REMARK 3 L TENSOR REMARK 3 L11: 2.3448 L22: 1.5746 REMARK 3 L33: 1.3870 L12: 0.0066 REMARK 3 L13: -0.7228 L23: 0.3790 REMARK 3 S TENSOR REMARK 3 S11: 0.0013 S12: -0.1421 S13: -0.0510 REMARK 3 S21: 0.0912 S22: -0.0213 S23: -0.0217 REMARK 3 S31: 0.1013 S32: 0.0105 S33: 0.0170 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 460 THROUGH 479 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.0627 -44.0575 -8.8742 REMARK 3 T TENSOR REMARK 3 T11: 0.3178 T22: 0.1677 REMARK 3 T33: 0.2980 T12: -0.0622 REMARK 3 T13: 0.0122 T23: -0.0318 REMARK 3 L TENSOR REMARK 3 L11: 2.3235 L22: 2.0545 REMARK 3 L33: 3.8845 L12: -0.6659 REMARK 3 L13: -0.6736 L23: -0.2735 REMARK 3 S TENSOR REMARK 3 S11: -0.1424 S12: 0.1554 S13: -0.2923 REMARK 3 S21: -0.0844 S22: 0.0670 S23: 0.2018 REMARK 3 S31: 0.5501 S32: -0.1817 S33: 0.1037 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 480 THROUGH 494 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5923 -45.3954 -16.3722 REMARK 3 T TENSOR REMARK 3 T11: 0.3911 T22: 0.2548 REMARK 3 T33: 0.3043 T12: 0.0655 REMARK 3 T13: 0.0114 T23: -0.0287 REMARK 3 L TENSOR REMARK 3 L11: 2.5659 L22: 7.5329 REMARK 3 L33: 2.4529 L12: -0.5494 REMARK 3 L13: -0.2425 L23: 0.9100 REMARK 3 S TENSOR REMARK 3 S11: -0.1248 S12: 0.2739 S13: -0.5135 REMARK 3 S21: 0.1423 S22: 0.4077 S23: -0.5972 REMARK 3 S31: 0.8480 S32: 0.8402 S33: -0.2293 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 495 THROUGH 527 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.1289 -27.8837 6.1892 REMARK 3 T TENSOR REMARK 3 T11: 0.2330 T22: 0.1861 REMARK 3 T33: 0.1833 T12: 0.0049 REMARK 3 T13: -0.0262 T23: -0.0251 REMARK 3 L TENSOR REMARK 3 L11: 3.8409 L22: 2.2622 REMARK 3 L33: 3.5475 L12: 0.4573 REMARK 3 L13: -0.7731 L23: -0.8520 REMARK 3 S TENSOR REMARK 3 S11: 0.0108 S12: -0.3316 S13: 0.0053 REMARK 3 S21: 0.3293 S22: 0.0070 S23: 0.1612 REMARK 3 S31: -0.0235 S32: -0.1342 S33: -0.0439 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.2357 3.8873 -5.3170 REMARK 3 T TENSOR REMARK 3 T11: 0.7585 T22: 0.3717 REMARK 3 T33: 0.5280 T12: -0.1481 REMARK 3 T13: 0.0674 T23: 0.0702 REMARK 3 L TENSOR REMARK 3 L11: 2.8451 L22: 4.9792 REMARK 3 L33: 2.3089 L12: 0.5702 REMARK 3 L13: -1.0916 L23: -1.3985 REMARK 3 S TENSOR REMARK 3 S11: -0.5039 S12: 1.0663 S13: 1.3902 REMARK 3 S21: -0.5088 S22: 0.8555 S23: 1.1167 REMARK 3 S31: -1.1383 S32: 0.3148 S33: -0.0963 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 18 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6892 -6.2421 1.5119 REMARK 3 T TENSOR REMARK 3 T11: 0.3525 T22: 0.2398 REMARK 3 T33: 0.4947 T12: 0.0399 REMARK 3 T13: 0.0487 T23: 0.0259 REMARK 3 L TENSOR REMARK 3 L11: 3.5832 L22: 3.9928 REMARK 3 L33: 2.7843 L12: 3.2089 REMARK 3 L13: -0.5939 L23: -1.2957 REMARK 3 S TENSOR REMARK 3 S11: 0.0043 S12: 0.1130 S13: 0.8033 REMARK 3 S21: 0.4364 S22: 0.1999 S23: 0.6992 REMARK 3 S31: -0.5254 S32: -0.2712 S33: -0.2193 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 33 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.1069 -5.6818 -6.2788 REMARK 3 T TENSOR REMARK 3 T11: 0.4900 T22: 0.3320 REMARK 3 T33: 0.3579 T12: -0.1362 REMARK 3 T13: 0.0574 T23: -0.0256 REMARK 3 L TENSOR REMARK 3 L11: 7.1084 L22: 7.7168 REMARK 3 L33: 7.3416 L12: 2.0647 REMARK 3 L13: -1.2008 L23: -2.6184 REMARK 3 S TENSOR REMARK 3 S11: -0.4894 S12: 0.9487 S13: -0.0769 REMARK 3 S21: -1.1149 S22: 0.3706 S23: -0.8563 REMARK 3 S31: 0.2230 S32: 0.5208 S33: 0.1030 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 45 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6445 -7.8912 0.1506 REMARK 3 T TENSOR REMARK 3 T11: 0.3923 T22: 0.3363 REMARK 3 T33: 0.3651 T12: 0.0110 REMARK 3 T13: 0.0092 T23: -0.0466 REMARK 3 L TENSOR REMARK 3 L11: 5.5996 L22: 7.0174 REMARK 3 L33: 2.2581 L12: 2.3714 REMARK 3 L13: -2.3284 L23: -3.2692 REMARK 3 S TENSOR REMARK 3 S11: 0.2978 S12: -0.1970 S13: 0.0901 REMARK 3 S21: -0.6824 S22: -0.1573 S23: 0.0419 REMARK 3 S31: -0.2633 S32: 0.7448 S33: -0.0333 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 53 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.0875 -3.3084 7.6660 REMARK 3 T TENSOR REMARK 3 T11: 0.3855 T22: 0.2471 REMARK 3 T33: 0.3376 T12: -0.0319 REMARK 3 T13: -0.0120 T23: -0.0648 REMARK 3 L TENSOR REMARK 3 L11: 1.5378 L22: 7.0184 REMARK 3 L33: 8.5370 L12: 1.7426 REMARK 3 L13: -1.9338 L23: -2.4726 REMARK 3 S TENSOR REMARK 3 S11: 0.1608 S12: -0.3713 S13: 0.4592 REMARK 3 S21: 0.8060 S22: -0.1764 S23: -0.0321 REMARK 3 S31: -0.9291 S32: 0.5336 S33: 0.0538 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 74 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.1390 1.0087 3.7567 REMARK 3 T TENSOR REMARK 3 T11: 0.5385 T22: 0.4731 REMARK 3 T33: 0.4972 T12: 0.0766 REMARK 3 T13: 0.1550 T23: -0.0119 REMARK 3 L TENSOR REMARK 3 L11: 8.1572 L22: 8.6072 REMARK 3 L33: 2.6558 L12: -0.8406 REMARK 3 L13: -0.8411 L23: -1.3899 REMARK 3 S TENSOR REMARK 3 S11: 0.4253 S12: -0.4967 S13: 0.5465 REMARK 3 S21: 0.7503 S22: 0.0869 S23: 1.0057 REMARK 3 S31: -1.1025 S32: -0.8011 S33: -0.4478 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.9835 1.1795 -3.7447 REMARK 3 T TENSOR REMARK 3 T11: 0.4602 T22: 0.3691 REMARK 3 T33: 0.4613 T12: -0.1639 REMARK 3 T13: -0.0069 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 2.7039 L22: 4.7576 REMARK 3 L33: 3.4106 L12: 0.5698 REMARK 3 L13: -0.8286 L23: -0.3724 REMARK 3 S TENSOR REMARK 3 S11: 0.1519 S12: -0.4119 S13: 0.2885 REMARK 3 S21: 0.1158 S22: -0.1604 S23: -0.7119 REMARK 3 S31: -0.7137 S32: 0.7169 S33: 0.0155 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 100 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.7800 -8.9067 -4.4275 REMARK 3 T TENSOR REMARK 3 T11: 0.2659 T22: 0.2097 REMARK 3 T33: 0.2684 T12: -0.0311 REMARK 3 T13: 0.0169 T23: 0.0085 REMARK 3 L TENSOR REMARK 3 L11: 1.9643 L22: 6.9686 REMARK 3 L33: 3.3449 L12: 1.4407 REMARK 3 L13: 0.0380 L23: -1.6982 REMARK 3 S TENSOR REMARK 3 S11: 0.0073 S12: 0.2499 S13: 0.2318 REMARK 3 S21: -0.4843 S22: 0.3141 S23: 0.1912 REMARK 3 S31: -0.2567 S32: 0.0933 S33: -0.3203 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.3929 -29.1657 -36.4633 REMARK 3 T TENSOR REMARK 3 T11: 0.2745 T22: 0.3821 REMARK 3 T33: 0.1928 T12: -0.0795 REMARK 3 T13: -0.0167 T23: -0.0390 REMARK 3 L TENSOR REMARK 3 L11: 1.9429 L22: 2.7800 REMARK 3 L33: 5.0317 L12: 1.3369 REMARK 3 L13: 1.1619 L23: -2.0284 REMARK 3 S TENSOR REMARK 3 S11: 0.4068 S12: 0.5102 S13: -0.4076 REMARK 3 S21: -0.9976 S22: -0.1742 S23: 0.6560 REMARK 3 S31: 0.5869 S32: -0.4688 S33: -0.2393 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 18 THROUGH 63 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.9324 -29.3860 -25.6826 REMARK 3 T TENSOR REMARK 3 T11: 0.1928 T22: 0.2741 REMARK 3 T33: 0.2305 T12: 0.0005 REMARK 3 T13: 0.0003 T23: -0.0277 REMARK 3 L TENSOR REMARK 3 L11: 1.8245 L22: 2.2359 REMARK 3 L33: 3.8525 L12: -0.1171 REMARK 3 L13: 0.7017 L23: -1.1710 REMARK 3 S TENSOR REMARK 3 S11: 0.0175 S12: 0.1585 S13: -0.0549 REMARK 3 S21: -0.0110 S22: -0.0396 S23: 0.0563 REMARK 3 S31: 0.1476 S32: -0.2851 S33: 0.0083 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 64 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.4560 -29.4286 -28.7847 REMARK 3 T TENSOR REMARK 3 T11: 0.2459 T22: 0.3134 REMARK 3 T33: 0.2540 T12: -0.0294 REMARK 3 T13: -0.0068 T23: -0.0318 REMARK 3 L TENSOR REMARK 3 L11: 2.3554 L22: 2.0203 REMARK 3 L33: 2.9973 L12: -1.1595 REMARK 3 L13: 0.3341 L23: -1.5941 REMARK 3 S TENSOR REMARK 3 S11: -0.0423 S12: 0.1526 S13: 0.0132 REMARK 3 S21: 0.0192 S22: 0.0662 S23: 0.1746 REMARK 3 S31: 0.0205 S32: -0.5037 S33: -0.0162 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 114 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.1158 -15.4456 -57.2859 REMARK 3 T TENSOR REMARK 3 T11: 0.2116 T22: 0.2258 REMARK 3 T33: 0.2728 T12: 0.0205 REMARK 3 T13: -0.0529 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 1.7372 L22: 2.8607 REMARK 3 L33: 6.3059 L12: -0.6040 REMARK 3 L13: 0.0021 L23: -0.5380 REMARK 3 S TENSOR REMARK 3 S11: 0.1802 S12: 0.2304 S13: 0.4176 REMARK 3 S21: -0.1821 S22: 0.3342 S23: 0.1238 REMARK 3 S31: 0.0896 S32: -0.4202 S33: -0.4581 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 139 THROUGH 192 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.2192 -18.6995 -58.8276 REMARK 3 T TENSOR REMARK 3 T11: 0.2435 T22: 0.2026 REMARK 3 T33: 0.2500 T12: -0.0072 REMARK 3 T13: -0.0359 T23: -0.0094 REMARK 3 L TENSOR REMARK 3 L11: 4.3652 L22: 3.1052 REMARK 3 L33: 3.4600 L12: -0.1052 REMARK 3 L13: -0.0123 L23: -0.0906 REMARK 3 S TENSOR REMARK 3 S11: 0.0808 S12: 0.0820 S13: 0.0552 REMARK 3 S21: -0.3024 S22: 0.1234 S23: -0.1012 REMARK 3 S31: -0.0774 S32: 0.0503 S33: -0.1726 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 193 THROUGH 218 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.8975 -22.8637 -66.4776 REMARK 3 T TENSOR REMARK 3 T11: 0.4605 T22: 0.3102 REMARK 3 T33: 0.2916 T12: -0.0443 REMARK 3 T13: -0.0792 T23: -0.0551 REMARK 3 L TENSOR REMARK 3 L11: 9.1124 L22: 3.2285 REMARK 3 L33: 3.1672 L12: -1.3734 REMARK 3 L13: -4.0221 L23: 0.3049 REMARK 3 S TENSOR REMARK 3 S11: -0.0104 S12: 0.7498 S13: -0.3834 REMARK 3 S21: -0.7411 S22: -0.0008 S23: 0.0054 REMARK 3 S31: 0.1198 S32: -0.2650 S33: -0.0242 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 1 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.5280 -18.3425 -27.3593 REMARK 3 T TENSOR REMARK 3 T11: 0.2525 T22: 0.2830 REMARK 3 T33: 0.2796 T12: -0.0305 REMARK 3 T13: -0.0181 T23: -0.0116 REMARK 3 L TENSOR REMARK 3 L11: 3.0000 L22: 2.2292 REMARK 3 L33: 8.0720 L12: 1.7300 REMARK 3 L13: -2.8041 L23: -1.5036 REMARK 3 S TENSOR REMARK 3 S11: 0.2015 S12: -0.3678 S13: 0.1690 REMARK 3 S21: 0.2803 S22: -0.1381 S23: -0.0819 REMARK 3 S31: -0.5766 S32: 0.2943 S33: -0.0966 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 31 THROUGH 55 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.5166 -29.6334 -29.1894 REMARK 3 T TENSOR REMARK 3 T11: 0.2237 T22: 0.2584 REMARK 3 T33: 0.2440 T12: 0.0311 REMARK 3 T13: 0.0611 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 6.2464 L22: 4.6222 REMARK 3 L33: 6.2605 L12: 0.6252 REMARK 3 L13: 2.6111 L23: -0.8890 REMARK 3 S TENSOR REMARK 3 S11: -0.1464 S12: 0.0585 S13: -0.2029 REMARK 3 S21: -0.1723 S22: -0.0381 S23: 0.0630 REMARK 3 S31: 0.3083 S32: 0.5118 S33: 0.1769 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 56 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.3830 -25.5533 -29.3779 REMARK 3 T TENSOR REMARK 3 T11: 0.1919 T22: 0.2204 REMARK 3 T33: 0.2437 T12: -0.0139 REMARK 3 T13: 0.0001 T23: 0.0133 REMARK 3 L TENSOR REMARK 3 L11: 3.8591 L22: 3.0793 REMARK 3 L33: 6.5311 L12: 0.1001 REMARK 3 L13: -1.1200 L23: -0.3083 REMARK 3 S TENSOR REMARK 3 S11: 0.0045 S12: -0.0771 S13: -0.0721 REMARK 3 S21: -0.0107 S22: -0.0816 S23: -0.0646 REMARK 3 S31: 0.1515 S32: 0.0214 S33: 0.0747 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 107 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.9364 -9.3131 -61.6951 REMARK 3 T TENSOR REMARK 3 T11: 0.3008 T22: 0.2033 REMARK 3 T33: 0.2236 T12: -0.0024 REMARK 3 T13: -0.0097 T23: 0.0121 REMARK 3 L TENSOR REMARK 3 L11: 6.0128 L22: 3.7385 REMARK 3 L33: 3.5716 L12: -2.7402 REMARK 3 L13: 2.3908 L23: -2.3155 REMARK 3 S TENSOR REMARK 3 S11: 0.0695 S12: 0.5134 S13: 0.0458 REMARK 3 S21: -0.5385 S22: -0.0621 S23: 0.2209 REMARK 3 S31: 0.1426 S32: 0.0629 S33: -0.0301 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 138 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.8085 -8.1765 -53.1899 REMARK 3 T TENSOR REMARK 3 T11: 0.2710 T22: 0.2211 REMARK 3 T33: 0.1860 T12: -0.0075 REMARK 3 T13: 0.0168 T23: -0.0322 REMARK 3 L TENSOR REMARK 3 L11: 4.6297 L22: 5.2373 REMARK 3 L33: 2.4918 L12: -2.9221 REMARK 3 L13: 1.0563 L23: -2.8907 REMARK 3 S TENSOR REMARK 3 S11: 0.0446 S12: -0.0337 S13: 0.0903 REMARK 3 S21: 0.0399 S22: -0.0693 S23: -0.0982 REMARK 3 S31: -0.2022 S32: 0.1004 S33: 0.0201 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 175 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.9577 -0.3846 -62.4018 REMARK 3 T TENSOR REMARK 3 T11: 0.3912 T22: 0.1445 REMARK 3 T33: 0.2821 T12: 0.0325 REMARK 3 T13: 0.0050 T23: -0.0316 REMARK 3 L TENSOR REMARK 3 L11: 8.2663 L22: 4.0301 REMARK 3 L33: 4.2270 L12: -1.8022 REMARK 3 L13: 3.1955 L23: -2.4082 REMARK 3 S TENSOR REMARK 3 S11: -0.2814 S12: 0.2912 S13: 0.8050 REMARK 3 S21: -0.3739 S22: -0.0472 S23: -0.0350 REMARK 3 S31: -0.2491 S32: 0.0107 S33: 0.3021 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ZXU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1292123224. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAY-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72125 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.890 REMARK 200 RESOLUTION RANGE LOW (A) : 66.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 27.40 REMARK 200 R MERGE (I) : 0.31300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.89 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7PS1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4% (V/V) 2-PROPANOL, 0.1M BIS-TRIS REMARK 280 PROPANE, PH9.0, 20% (W/V) PEG MONOMETHYL ETHER 5000, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.05300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.72150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.21800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.72150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.05300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.21800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, A, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS E 327 REMARK 465 HIS E 328 REMARK 465 HIS E 329 REMARK 465 HIS E 330 REMARK 465 LYS E 528 REMARK 465 LYS A 125 REMARK 465 HIS A 126 REMARK 465 HIS A 127 REMARK 465 HIS A 128 REMARK 465 HIS A 129 REMARK 465 HIS A 130 REMARK 465 HIS A 131 REMARK 465 SER H 132 REMARK 465 LYS H 133 REMARK 465 SER H 134 REMARK 465 THR H 135 REMARK 465 SER H 136 REMARK 465 GLY H 137 REMARK 465 SER H 219 REMARK 465 CYS H 220 REMARK 465 ASP H 221 REMARK 465 LYS H 222 REMARK 465 CYS L 214 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS E 527 CG CD CE NZ REMARK 470 GLU H 1 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH H 466 O HOH H 499 1.86 REMARK 500 O HOH L 487 O HOH L 561 1.86 REMARK 500 O HOH H 544 O HOH H 546 1.91 REMARK 500 O HOH E 794 O HOH E 828 1.93 REMARK 500 O HOH A 1535 O HOH A 1565 1.95 REMARK 500 O HOH E 774 O HOH E 827 1.95 REMARK 500 O HOH E 715 O HOH E 839 1.95 REMARK 500 O HOH E 842 O HOH E 845 1.95 REMARK 500 O HOH H 500 O HOH H 557 1.96 REMARK 500 O HOH H 413 O HOH H 417 1.99 REMARK 500 O HOH E 810 O HOH E 826 1.99 REMARK 500 O HOH H 529 O HOH H 552 1.99 REMARK 500 O HOH L 502 O HOH L 547 2.03 REMARK 500 O ALA H 129 O HOH H 401 2.04 REMARK 500 O HOH H 491 O HOH H 545 2.04 REMARK 500 O HOH H 490 O HOH L 528 2.05 REMARK 500 O HOH L 456 O HOH L 527 2.05 REMARK 500 O HOH A 1538 O HOH A 1544 2.06 REMARK 500 O HOH L 464 O HOH L 556 2.08 REMARK 500 OE2 GLU A 44 O HOH A 1501 2.08 REMARK 500 O HOH H 510 O HOH H 548 2.08 REMARK 500 O HOH E 816 O HOH E 849 2.09 REMARK 500 O HOH E 862 O HOH A 1571 2.09 REMARK 500 O HOH H 533 O HOH H 538 2.10 REMARK 500 O SER L 94 O HOH L 401 2.10 REMARK 500 O HOH A 1511 O HOH A 1533 2.10 REMARK 500 O HOH H 518 O HOH H 522 2.11 REMARK 500 NH2 ARG A 100 O HOH A 1502 2.11 REMARK 500 NH2 ARG L 46 O HOH L 402 2.13 REMARK 500 O HOH A 1558 O HOH A 1570 2.13 REMARK 500 O HOH A 1530 O HOH A 1561 2.14 REMARK 500 O HOH E 860 O HOH E 864 2.15 REMARK 500 O GLU L 213 O HOH L 403 2.16 REMARK 500 O HOH E 770 O HOH E 862 2.18 REMARK 500 O HOH H 541 O HOH L 516 2.19 REMARK 500 O HOH A 1541 O HOH A 1547 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH H 514 O HOH L 555 4444 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA E 352 52.01 -113.02 REMARK 500 ASN E 422 -54.95 -128.72 REMARK 500 PHE A 31 49.68 -85.42 REMARK 500 VAL H 100 -90.56 59.54 REMARK 500 THR L 52 -39.80 70.35 REMARK 500 ASN L 138 73.23 55.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH E 866 DISTANCE = 6.08 ANGSTROMS DBREF 7ZXU E 333 528 UNP P0DTC2 SPIKE_SARS2 333 528 DBREF 7ZXU A 1 131 PDB 7ZXU 7ZXU 1 131 DBREF 7ZXU H 1 222 PDB 7ZXU 7ZXU 1 222 DBREF 7ZXU L 1 214 PDB 7ZXU 7ZXU 1 214 SEQADV 7ZXU HIS E 327 UNP P0DTC2 EXPRESSION TAG SEQADV 7ZXU HIS E 328 UNP P0DTC2 EXPRESSION TAG SEQADV 7ZXU HIS E 329 UNP P0DTC2 EXPRESSION TAG SEQADV 7ZXU HIS E 330 UNP P0DTC2 EXPRESSION TAG SEQADV 7ZXU HIS E 331 UNP P0DTC2 EXPRESSION TAG SEQADV 7ZXU HIS E 332 UNP P0DTC2 EXPRESSION TAG SEQADV 7ZXU ASP E 339 UNP P0DTC2 GLY 339 VARIANT SEQADV 7ZXU PHE E 371 UNP P0DTC2 SER 371 VARIANT SEQADV 7ZXU PRO E 373 UNP P0DTC2 SER 373 VARIANT SEQADV 7ZXU PHE E 375 UNP P0DTC2 SER 375 VARIANT SEQADV 7ZXU ALA E 376 UNP P0DTC2 THR 376 VARIANT SEQADV 7ZXU ASN E 405 UNP P0DTC2 ASP 405 VARIANT SEQADV 7ZXU SER E 408 UNP P0DTC2 ARG 408 VARIANT SEQADV 7ZXU ASN E 417 UNP P0DTC2 LYS 417 VARIANT SEQADV 7ZXU LYS E 440 UNP P0DTC2 ASN 440 VARIANT SEQADV 7ZXU ARG E 452 UNP P0DTC2 LEU 452 VARIANT SEQADV 7ZXU ASN E 477 UNP P0DTC2 SER 477 VARIANT SEQADV 7ZXU LYS E 478 UNP P0DTC2 THR 478 VARIANT SEQADV 7ZXU ALA E 484 UNP P0DTC2 GLU 484 VARIANT SEQADV 7ZXU VAL E 486 UNP P0DTC2 PHE 486 CONFLICT SEQADV 7ZXU ARG E 498 UNP P0DTC2 GLN 498 VARIANT SEQADV 7ZXU TYR E 501 UNP P0DTC2 ASN 501 VARIANT SEQADV 7ZXU HIS E 505 UNP P0DTC2 TYR 505 VARIANT SEQADV 7ZXU LYS E 527 UNP P0DTC2 PRO 527 CONFLICT SEQRES 1 E 202 HIS HIS HIS HIS HIS HIS THR ASN LEU CYS PRO PHE ASP SEQRES 2 E 202 GLU VAL PHE ASN ALA THR ARG PHE ALA SER VAL TYR ALA SEQRES 3 E 202 TRP ASN ARG LYS ARG ILE SER ASN CYS VAL ALA ASP TYR SEQRES 4 E 202 SER VAL LEU TYR ASN PHE ALA PRO PHE PHE ALA PHE LYS SEQRES 5 E 202 CYS TYR GLY VAL SER PRO THR LYS LEU ASN ASP LEU CYS SEQRES 6 E 202 PHE THR ASN VAL TYR ALA ASP SER PHE VAL ILE ARG GLY SEQRES 7 E 202 ASN GLU VAL SER GLN ILE ALA PRO GLY GLN THR GLY ASN SEQRES 8 E 202 ILE ALA ASP TYR ASN TYR LYS LEU PRO ASP ASP PHE THR SEQRES 9 E 202 GLY CYS VAL ILE ALA TRP ASN SER ASN LYS LEU ASP SER SEQRES 10 E 202 LYS VAL GLY GLY ASN TYR ASN TYR ARG TYR ARG LEU PHE SEQRES 11 E 202 ARG LYS SER ASN LEU LYS PRO PHE GLU ARG ASP ILE SER SEQRES 12 E 202 THR GLU ILE TYR GLN ALA GLY ASN LYS PRO CYS ASN GLY SEQRES 13 E 202 VAL ALA GLY VAL ASN CYS TYR PHE PRO LEU GLN SER TYR SEQRES 14 E 202 GLY PHE ARG PRO THR TYR GLY VAL GLY HIS GLN PRO TYR SEQRES 15 E 202 ARG VAL VAL VAL LEU SER PHE GLU LEU LEU HIS ALA PRO SEQRES 16 E 202 ALA THR VAL CYS GLY LYS LYS SEQRES 1 A 131 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 A 131 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 A 131 PHE THR ASN ASP PHE TYR SER ILE ALA TRP PHE ARG GLN SEQRES 4 A 131 ALA PRO GLY LYS GLU ARG GLU GLY VAL SER TRP LEU SER SEQRES 5 A 131 VAL SER ASP ASN THR PRO THR TYR VAL ASP SER VAL LYS SEQRES 6 A 131 ASP ARG PHE THR ILE SER ARG HIS ASN ALA ASN ASN THR SEQRES 7 A 131 VAL TYR LEU GLN MET ASN MET LEU LYS PRO GLU ASP THR SEQRES 8 A 131 ALA ILE TYR TYR CYS ALA ALA GLY ARG PHE ALA GLY ARG SEQRES 9 A 131 ASP THR TRP PRO SER SER TYR ASP TYR TRP GLY GLN GLY SEQRES 10 A 131 THR GLN VAL THR VAL SER SER LYS HIS HIS HIS HIS HIS SEQRES 11 A 131 HIS SEQRES 1 H 222 GLU VAL GLN LEU LEU GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 222 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 222 LEU THR VAL ARG SER ASN TYR MET ASN TRP VAL ARG GLN SEQRES 4 H 222 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER LEU ILE TYR SEQRES 5 H 222 SER GLY GLY SER THR PHE TYR ALA ASP SER VAL LYS GLY SEQRES 6 H 222 ARG PHE THR ILE SER ARG HIS ASP SER LYS ASN THR LEU SEQRES 7 H 222 TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR ALA SEQRES 8 H 222 VAL TYR TYR CYS ALA ARG ASP LEU VAL VAL TYR GLY MET SEQRES 9 H 222 ASP VAL TRP GLY GLN GLY THR THR VAL THR VAL SER SER SEQRES 10 H 222 ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SEQRES 11 H 222 SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY SEQRES 12 H 222 CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SEQRES 13 H 222 SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR SEQRES 14 H 222 PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SEQRES 15 H 222 SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR SEQRES 16 H 222 GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN SEQRES 17 H 222 THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS ASP SEQRES 18 H 222 LYS SEQRES 1 L 214 ASP ILE GLN MET THR GLN SER PRO GLY THR LEU SER LEU SEQRES 2 L 214 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 L 214 GLN SER VAL SER SER SER SER LEU ALA TRP TYR GLN GLN SEQRES 4 L 214 LYS HIS GLY GLN ALA PRO ARG LEU LEU ILE TYR GLY THR SEQRES 5 L 214 SER SER ARG ALA THR GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 L 214 SER GLY SER GLY THR ASP PHE THR LEU THR ILE SER GLY SEQRES 7 L 214 LEU GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN SEQRES 8 L 214 TYR GLY SER SER PRO LEU PHE GLY GLY GLY THR LYS VAL SEQRES 9 L 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 214 PHE ASN ARG GLY GLU CYS HET GOL E 601 6 HET GOL E 602 6 HET IPA E 603 4 HET IPA E 604 4 HET NAG E 605 14 HET IPA E 606 4 HET GOL E 607 6 HET IPA A1401 4 HET GOL A1402 6 HET GOL A1403 6 HET GOL H 301 6 HET GOL H 302 6 HET GOL H 303 6 HET IPA H 304 4 HET GOL H 305 6 HET PG4 L 301 13 HET GOL L 302 6 HET IPA L 303 4 HETNAM GOL GLYCEROL HETNAM IPA ISOPROPYL ALCOHOL HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM PG4 TETRAETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN IPA 2-PROPANOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 5 GOL 10(C3 H8 O3) FORMUL 7 IPA 6(C3 H8 O) FORMUL 9 NAG C8 H15 N O6 FORMUL 20 PG4 C8 H18 O5 FORMUL 23 HOH *577(H2 O) HELIX 1 AA1 PHE E 338 ASN E 343 1 6 HELIX 2 AA2 SER E 349 TRP E 353 5 5 HELIX 3 AA3 ASP E 364 ASN E 370 1 7 HELIX 4 AA4 LYS E 386 ASP E 389 5 4 HELIX 5 AA5 ASN E 405 ILE E 410 5 6 HELIX 6 AA6 GLY E 416 ASN E 422 1 7 HELIX 7 AA7 SER E 438 SER E 443 1 6 HELIX 8 AA8 ASP A 62 LYS A 65 5 4 HELIX 9 AA9 LYS A 87 THR A 91 5 5 HELIX 10 AB1 TRP A 107 TYR A 111 5 5 HELIX 11 AB2 THR H 28 ASN H 32 5 5 HELIX 12 AB3 ASP H 61 LYS H 64 5 4 HELIX 13 AB4 ARG H 86 THR H 90 5 5 HELIX 14 AB5 LEU H 99 GLY H 103 5 5 HELIX 15 AB6 SER H 160 ALA H 162 5 3 HELIX 16 AB7 SER H 191 LEU H 193 5 3 HELIX 17 AB8 LYS H 205 ASN H 208 5 4 HELIX 18 AB9 SER L 30 SER L 32 5 3 HELIX 19 AC1 GLU L 80 PHE L 84 5 5 HELIX 20 AC2 SER L 121 SER L 127 1 7 HELIX 21 AC3 LYS L 183 GLU L 187 1 5 SHEET 1 AA1 6 ASN E 354 ILE E 358 0 SHEET 2 AA1 6 ASN E 394 ARG E 403 -1 O VAL E 395 N ILE E 358 SHEET 3 AA1 6 PRO E 507 GLU E 516 -1 O TYR E 508 N ILE E 402 SHEET 4 AA1 6 CYS E 432 ASN E 437 -1 N ILE E 434 O VAL E 511 SHEET 5 AA1 6 ALA E 376 CYS E 379 -1 N LYS E 378 O VAL E 433 SHEET 6 AA1 6 ALA A 102 ARG A 104 -1 O ALA A 102 N CYS E 379 SHEET 1 AA2 3 CYS E 361 ALA E 363 0 SHEET 2 AA2 3 VAL E 524 GLY E 526 1 O CYS E 525 N ALA E 363 SHEET 3 AA2 3 CYS E 391 PHE E 392 -1 N PHE E 392 O VAL E 524 SHEET 1 AA3 2 ARG E 452 ARG E 454 0 SHEET 2 AA3 2 LEU E 492 SER E 494 -1 O GLN E 493 N TYR E 453 SHEET 1 AA4 2 TYR E 473 GLN E 474 0 SHEET 2 AA4 2 CYS E 488 TYR E 489 -1 O TYR E 489 N TYR E 473 SHEET 1 AA5 4 GLN A 3 SER A 7 0 SHEET 2 AA5 4 LEU A 18 SER A 25 -1 O ALA A 23 N VAL A 5 SHEET 3 AA5 4 THR A 78 MET A 83 -1 O MET A 83 N LEU A 18 SHEET 4 AA5 4 PHE A 68 HIS A 73 -1 N THR A 69 O GLN A 82 SHEET 1 AA6 6 GLY A 10 VAL A 12 0 SHEET 2 AA6 6 THR A 118 VAL A 122 1 O THR A 121 N VAL A 12 SHEET 3 AA6 6 ALA A 92 GLY A 99 -1 N TYR A 94 O THR A 118 SHEET 4 AA6 6 SER A 33 GLN A 39 -1 N PHE A 37 O TYR A 95 SHEET 5 AA6 6 ARG A 45 SER A 52 -1 O GLU A 46 N ARG A 38 SHEET 6 AA6 6 THR A 57 TYR A 60 -1 O THR A 59 N TRP A 50 SHEET 1 AA7 4 GLY A 10 VAL A 12 0 SHEET 2 AA7 4 THR A 118 VAL A 122 1 O THR A 121 N VAL A 12 SHEET 3 AA7 4 ALA A 92 GLY A 99 -1 N TYR A 94 O THR A 118 SHEET 4 AA7 4 TYR A 113 TRP A 114 -1 O TYR A 113 N ALA A 98 SHEET 1 AA8 4 GLN H 3 SER H 7 0 SHEET 2 AA8 4 LEU H 18 SER H 25 -1 O SER H 21 N SER H 7 SHEET 3 AA8 4 THR H 77 MET H 82 -1 O LEU H 78 N CYS H 22 SHEET 4 AA8 4 PHE H 67 HIS H 72 -1 N THR H 68 O GLN H 81 SHEET 1 AA9 6 LEU H 11 VAL H 12 0 SHEET 2 AA9 6 THR H 111 VAL H 115 1 O THR H 114 N VAL H 12 SHEET 3 AA9 6 ALA H 91 ASP H 98 -1 N ALA H 91 O VAL H 113 SHEET 4 AA9 6 TYR H 33 GLN H 39 -1 N VAL H 37 O TYR H 94 SHEET 5 AA9 6 LEU H 45 ILE H 51 -1 O VAL H 48 N TRP H 36 SHEET 6 AA9 6 THR H 57 TYR H 59 -1 O PHE H 58 N LEU H 50 SHEET 1 AB1 4 LEU H 11 VAL H 12 0 SHEET 2 AB1 4 THR H 111 VAL H 115 1 O THR H 114 N VAL H 12 SHEET 3 AB1 4 ALA H 91 ASP H 98 -1 N ALA H 91 O VAL H 113 SHEET 4 AB1 4 VAL H 106 TRP H 107 -1 O VAL H 106 N ARG H 97 SHEET 1 AB2 4 SER H 124 LEU H 128 0 SHEET 2 AB2 4 THR H 139 TYR H 149 -1 O LEU H 145 N PHE H 126 SHEET 3 AB2 4 TYR H 180 PRO H 189 -1 O TYR H 180 N TYR H 149 SHEET 4 AB2 4 VAL H 167 THR H 169 -1 N HIS H 168 O VAL H 185 SHEET 1 AB3 4 SER H 124 LEU H 128 0 SHEET 2 AB3 4 THR H 139 TYR H 149 -1 O LEU H 145 N PHE H 126 SHEET 3 AB3 4 TYR H 180 PRO H 189 -1 O TYR H 180 N TYR H 149 SHEET 4 AB3 4 VAL H 173 LEU H 174 -1 N VAL H 173 O SER H 181 SHEET 1 AB4 3 THR H 155 TRP H 158 0 SHEET 2 AB4 3 ILE H 199 HIS H 204 -1 O ASN H 201 N SER H 157 SHEET 3 AB4 3 THR H 209 LYS H 214 -1 O VAL H 211 N VAL H 202 SHEET 1 AB5 3 MET L 4 SER L 7 0 SHEET 2 AB5 3 ARG L 18 VAL L 29 -1 O ARG L 24 N THR L 5 SHEET 3 AB5 3 PHE L 63 SER L 77 -1 O PHE L 72 N CYS L 23 SHEET 1 AB6 6 THR L 10 LEU L 13 0 SHEET 2 AB6 6 THR L 102 ILE L 106 1 O LYS L 103 N LEU L 11 SHEET 3 AB6 6 VAL L 86 TYR L 92 -1 N TYR L 87 O THR L 102 SHEET 4 AB6 6 LEU L 34 GLN L 39 -1 N TYR L 37 O TYR L 88 SHEET 5 AB6 6 ARG L 46 TYR L 50 -1 O ILE L 49 N TRP L 36 SHEET 6 AB6 6 SER L 54 ARG L 55 -1 O SER L 54 N TYR L 50 SHEET 1 AB7 4 THR L 10 LEU L 13 0 SHEET 2 AB7 4 THR L 102 ILE L 106 1 O LYS L 103 N LEU L 11 SHEET 3 AB7 4 VAL L 86 TYR L 92 -1 N TYR L 87 O THR L 102 SHEET 4 AB7 4 PRO L 96 PHE L 98 -1 O LEU L 97 N GLN L 91 SHEET 1 AB8 4 SER L 114 PHE L 118 0 SHEET 2 AB8 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AB8 4 TYR L 173 SER L 182 -1 O LEU L 179 N VAL L 132 SHEET 4 AB8 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AB9 4 ALA L 153 GLN L 155 0 SHEET 2 AB9 4 LYS L 145 VAL L 150 -1 N TRP L 148 O GLN L 155 SHEET 3 AB9 4 VAL L 191 THR L 197 -1 O ALA L 193 N LYS L 149 SHEET 4 AB9 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SSBOND 1 CYS E 336 CYS E 361 1555 1555 2.03 SSBOND 2 CYS E 379 CYS E 432 1555 1555 2.04 SSBOND 3 CYS E 391 CYS E 525 1555 1555 2.03 SSBOND 4 CYS E 480 CYS E 488 1555 1555 2.03 SSBOND 5 CYS A 22 CYS A 96 1555 1555 2.03 SSBOND 6 CYS H 22 CYS H 95 1555 1555 2.03 SSBOND 7 CYS H 144 CYS H 200 1555 1555 2.03 SSBOND 8 CYS L 23 CYS L 89 1555 1555 2.04 SSBOND 9 CYS L 134 CYS L 194 1555 1555 2.04 LINK ND2 ASN E 343 C1 NAG E 605 1555 1555 1.44 LINK NZ LYS H 210 O2 IPA L 303 1555 4444 1.30 CISPEP 1 PHE H 150 PRO H 151 0 -5.65 CISPEP 2 GLU H 152 PRO H 153 0 -2.42 CISPEP 3 SER L 7 PRO L 8 0 -4.82 CISPEP 4 TYR L 140 PRO L 141 0 3.50 CRYST1 84.106 100.436 105.443 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011890 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009957 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009484 0.00000