HEADER GENE REGULATION 23-MAY-22 7ZY4 TITLE CRYSTAL STRUCTURE OF HUMAN CSTF77 IN COMPLEX WITH HFIP1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CLEAVAGE STIMULATION FACTOR SUBUNIT 3; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CF-1 77 KDA SUBUNIT,CLEAVAGE STIMULATION FACTOR 77 KDA COMPND 5 SUBUNIT,CSTF 77 KDA SUBUNIT,CSTF-77; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: HFIP1; COMPND 9 CHAIN: C, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CSTF3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COMPLEX, 3' END PROCESSING, CSTF, CPSF, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR L.M.MUCKENFUSS,M.JINEK REVDAT 3 31-JAN-24 7ZY4 1 REMARK REVDAT 2 21-SEP-22 7ZY4 1 JRNL REVDAT 1 14-SEP-22 7ZY4 0 JRNL AUTH L.M.MUCKENFUSS,A.C.MIGENDA HERRANZ,F.M.BONEBERG,M.CLERICI, JRNL AUTH 2 M.JINEK JRNL TITL FIP1 IS A MULTIVALENT INTERACTION SCAFFOLD FOR PROCESSING JRNL TITL 2 FACTORS IN HUMAN MRNA 3' END BIOGENESIS. JRNL REF ELIFE V. 11 2022 JRNL REFN ESSN 2050-084X JRNL PMID 36073787 JRNL DOI 10.7554/ELIFE.80332 REMARK 2 REMARK 2 RESOLUTION. 2.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 38981 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1916 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 56.3100 - 6.1400 1.00 2897 142 0.1861 0.2015 REMARK 3 2 6.1400 - 4.8700 1.00 2719 143 0.1784 0.2441 REMARK 3 3 4.8700 - 4.2600 1.00 2695 131 0.1580 0.1451 REMARK 3 4 4.2600 - 3.8700 1.00 2674 138 0.1786 0.2128 REMARK 3 5 3.8700 - 3.5900 1.00 2648 137 0.1863 0.2374 REMARK 3 6 3.5900 - 3.3800 1.00 2656 128 0.2490 0.3165 REMARK 3 7 3.3800 - 3.2100 1.00 2622 141 0.2869 0.3374 REMARK 3 8 3.2100 - 3.0700 1.00 2640 127 0.2522 0.3152 REMARK 3 9 3.0700 - 2.9500 1.00 2616 142 0.2392 0.2865 REMARK 3 10 2.9500 - 2.8500 1.00 2593 150 0.2461 0.2697 REMARK 3 11 2.8500 - 2.7600 1.00 2605 127 0.2860 0.3188 REMARK 3 12 2.7600 - 2.6800 1.00 2599 141 0.3497 0.4221 REMARK 3 13 2.6800 - 2.6100 1.00 2635 128 0.4329 0.4843 REMARK 3 14 2.6100 - 2.5500 1.00 2586 141 0.4924 0.4688 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.459 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.698 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 70.93 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 70.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 5371 REMARK 3 ANGLE : 1.353 7219 REMARK 3 CHIRALITY : 0.055 756 REMARK 3 PLANARITY : 0.010 907 REMARK 3 DIHEDRAL : 15.244 2029 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 2.0176 45.7710 -0.0108 REMARK 3 T TENSOR REMARK 3 T11: 0.5190 T22: 0.5154 REMARK 3 T33: 0.5422 T12: -0.0080 REMARK 3 T13: 0.0059 T23: 0.0243 REMARK 3 L TENSOR REMARK 3 L11: 1.5443 L22: 0.0938 REMARK 3 L33: 0.8941 L12: 0.1841 REMARK 3 L13: 1.0073 L23: 0.1539 REMARK 3 S TENSOR REMARK 3 S11: 0.0300 S12: -0.0019 S13: -0.2123 REMARK 3 S21: 0.0029 S22: 0.0683 S23: -0.0356 REMARK 3 S31: -0.0590 S32: 0.0116 S33: -0.0728 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : chain "A" REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and resid 244 through 552) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7ZY4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1292123051. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC 20211020 REMARK 200 DATA SCALING SOFTWARE : AUTOPROC 20211020 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38981 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.550 REMARK 200 RESOLUTION RANGE LOW (A) : 56.310 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 40.50 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 36.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 42.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.19.2_4158 REMARK 200 STARTING MODEL: 2OOE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BICINE PH 9.0, 10% W/V PEG 20K, REMARK 280 2% V/V DIOXANE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 278.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.66833 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 107.33667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 80.50250 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 134.17083 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 26.83417 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 53.66833 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 107.33667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 134.17083 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 80.50250 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 26.83417 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 238 REMARK 465 ASN A 239 REMARK 465 ALA A 240 REMARK 465 ASN A 241 REMARK 465 THR A 242 REMARK 465 PRO A 243 REMARK 465 VAL A 549 REMARK 465 SER B 238 REMARK 465 ASN B 239 REMARK 465 ALA B 240 REMARK 465 ASN B 241 REMARK 465 THR B 242 REMARK 465 VAL B 549 REMARK 465 SER C -2 REMARK 465 ASN C -1 REMARK 465 ALA C 0 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 ALA C 3 REMARK 465 GLY C 4 REMARK 465 GLU C 5 REMARK 465 VAL C 6 REMARK 465 GLU C 7 REMARK 465 ARG C 8 REMARK 465 LEU C 9 REMARK 465 VAL C 10 REMARK 465 SER C 11 REMARK 465 GLU C 12 REMARK 465 LEU C 13 REMARK 465 SER C 14 REMARK 465 GLY C 15 REMARK 465 GLY C 16 REMARK 465 THR C 17 REMARK 465 GLY C 18 REMARK 465 GLY C 28 REMARK 465 ASP C 29 REMARK 465 GLU C 30 REMARK 465 ASN C 31 REMARK 465 GLU C 32 REMARK 465 VAL C 33 REMARK 465 GLU C 34 REMARK 465 ARG C 35 REMARK 465 SER D -2 REMARK 465 ASN D -1 REMARK 465 ALA D 0 REMARK 465 MET D 1 REMARK 465 SER D 2 REMARK 465 ALA D 3 REMARK 465 GLY D 4 REMARK 465 GLU D 5 REMARK 465 VAL D 6 REMARK 465 GLU D 7 REMARK 465 ARG D 8 REMARK 465 LEU D 9 REMARK 465 VAL D 10 REMARK 465 SER D 11 REMARK 465 GLU D 12 REMARK 465 LEU D 13 REMARK 465 SER D 14 REMARK 465 GLY D 15 REMARK 465 GLY D 16 REMARK 465 THR D 17 REMARK 465 GLY D 18 REMARK 465 GLY D 19 REMARK 465 ASP D 20 REMARK 465 ASP D 29 REMARK 465 GLU D 30 REMARK 465 ASN D 31 REMARK 465 GLU D 32 REMARK 465 VAL D 33 REMARK 465 GLU D 34 REMARK 465 ARG D 35 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ILE A 451 HG SER A 455 1.58 REMARK 500 HH11 ARG B 365 O HOH B 702 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 265 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 335 -56.66 75.87 REMARK 500 LEU A 336 51.34 -112.23 REMARK 500 LYS A 355 77.48 -106.48 REMARK 500 ASN A 458 36.01 70.40 REMARK 500 MET A 531 -124.61 53.01 REMARK 500 ASN B 262 71.63 55.58 REMARK 500 LEU B 335 -60.77 78.55 REMARK 500 LEU B 336 55.47 -114.55 REMARK 500 LYS B 355 74.82 -102.92 REMARK 500 SER B 473 -47.67 -28.94 REMARK 500 MET B 531 -124.20 53.15 REMARK 500 REMARK 500 REMARK: NULL DBREF 7ZY4 A 241 549 UNP Q12996 CSTF3_HUMAN 241 549 DBREF 7ZY4 B 241 549 UNP Q12996 CSTF3_HUMAN 241 549 DBREF 7ZY4 C -2 35 PDB 7ZY4 7ZY4 -2 35 DBREF 7ZY4 D -2 35 PDB 7ZY4 7ZY4 -2 35 SEQADV 7ZY4 SER A 238 UNP Q12996 EXPRESSION TAG SEQADV 7ZY4 ASN A 239 UNP Q12996 EXPRESSION TAG SEQADV 7ZY4 ALA A 240 UNP Q12996 EXPRESSION TAG SEQADV 7ZY4 SER B 238 UNP Q12996 EXPRESSION TAG SEQADV 7ZY4 ASN B 239 UNP Q12996 EXPRESSION TAG SEQADV 7ZY4 ALA B 240 UNP Q12996 EXPRESSION TAG SEQRES 1 A 312 SER ASN ALA ASN THR PRO GLN GLU ALA GLN GLN VAL ASP SEQRES 2 A 312 MET TRP LYS LYS TYR ILE GLN TRP GLU LYS SER ASN PRO SEQRES 3 A 312 LEU ARG THR GLU ASP GLN THR LEU ILE THR LYS ARG VAL SEQRES 4 A 312 MET PHE ALA TYR GLU GLN CYS LEU LEU VAL LEU GLY HIS SEQRES 5 A 312 HIS PRO ASP ILE TRP TYR GLU ALA ALA GLN TYR LEU GLU SEQRES 6 A 312 GLN SER SER LYS LEU LEU ALA GLU LYS GLY ASP MET ASN SEQRES 7 A 312 ASN ALA LYS LEU PHE SER ASP GLU ALA ALA ASN ILE TYR SEQRES 8 A 312 GLU ARG ALA ILE SER THR LEU LEU LYS LYS ASN MET LEU SEQRES 9 A 312 LEU TYR PHE ALA TYR ALA ASP TYR GLU GLU SER ARG MET SEQRES 10 A 312 LYS TYR GLU LYS VAL HIS SER ILE TYR ASN ARG LEU LEU SEQRES 11 A 312 ALA ILE GLU ASP ILE ASP PRO THR LEU VAL TYR ILE GLN SEQRES 12 A 312 TYR MET LYS PHE ALA ARG ARG ALA GLU GLY ILE LYS SER SEQRES 13 A 312 GLY ARG MET ILE PHE LYS LYS ALA ARG GLU ASP THR ARG SEQRES 14 A 312 THR ARG HIS HIS VAL TYR VAL THR ALA ALA LEU MET GLU SEQRES 15 A 312 TYR TYR CYS SER LYS ASP LYS SER VAL ALA PHE LYS ILE SEQRES 16 A 312 PHE GLU LEU GLY LEU LYS LYS TYR GLY ASP ILE PRO GLU SEQRES 17 A 312 TYR VAL LEU ALA TYR ILE ASP TYR LEU SER HIS LEU ASN SEQRES 18 A 312 GLU ASP ASN ASN THR ARG VAL LEU PHE GLU ARG VAL LEU SEQRES 19 A 312 THR SER GLY SER LEU PRO PRO GLU LYS SER GLY GLU ILE SEQRES 20 A 312 TRP ALA ARG PHE LEU ALA PHE GLU SER ASN ILE GLY ASP SEQRES 21 A 312 LEU ALA SER ILE LEU LYS VAL GLU LYS ARG ARG PHE THR SEQRES 22 A 312 ALA PHE LYS GLU GLU TYR GLU GLY LYS GLU THR ALA LEU SEQRES 23 A 312 LEU VAL ASP ARG TYR LYS PHE MET ASP LEU TYR PRO CYS SEQRES 24 A 312 SER ALA SER GLU LEU LYS ALA LEU GLY TYR LYS ASP VAL SEQRES 1 B 312 SER ASN ALA ASN THR PRO GLN GLU ALA GLN GLN VAL ASP SEQRES 2 B 312 MET TRP LYS LYS TYR ILE GLN TRP GLU LYS SER ASN PRO SEQRES 3 B 312 LEU ARG THR GLU ASP GLN THR LEU ILE THR LYS ARG VAL SEQRES 4 B 312 MET PHE ALA TYR GLU GLN CYS LEU LEU VAL LEU GLY HIS SEQRES 5 B 312 HIS PRO ASP ILE TRP TYR GLU ALA ALA GLN TYR LEU GLU SEQRES 6 B 312 GLN SER SER LYS LEU LEU ALA GLU LYS GLY ASP MET ASN SEQRES 7 B 312 ASN ALA LYS LEU PHE SER ASP GLU ALA ALA ASN ILE TYR SEQRES 8 B 312 GLU ARG ALA ILE SER THR LEU LEU LYS LYS ASN MET LEU SEQRES 9 B 312 LEU TYR PHE ALA TYR ALA ASP TYR GLU GLU SER ARG MET SEQRES 10 B 312 LYS TYR GLU LYS VAL HIS SER ILE TYR ASN ARG LEU LEU SEQRES 11 B 312 ALA ILE GLU ASP ILE ASP PRO THR LEU VAL TYR ILE GLN SEQRES 12 B 312 TYR MET LYS PHE ALA ARG ARG ALA GLU GLY ILE LYS SER SEQRES 13 B 312 GLY ARG MET ILE PHE LYS LYS ALA ARG GLU ASP THR ARG SEQRES 14 B 312 THR ARG HIS HIS VAL TYR VAL THR ALA ALA LEU MET GLU SEQRES 15 B 312 TYR TYR CYS SER LYS ASP LYS SER VAL ALA PHE LYS ILE SEQRES 16 B 312 PHE GLU LEU GLY LEU LYS LYS TYR GLY ASP ILE PRO GLU SEQRES 17 B 312 TYR VAL LEU ALA TYR ILE ASP TYR LEU SER HIS LEU ASN SEQRES 18 B 312 GLU ASP ASN ASN THR ARG VAL LEU PHE GLU ARG VAL LEU SEQRES 19 B 312 THR SER GLY SER LEU PRO PRO GLU LYS SER GLY GLU ILE SEQRES 20 B 312 TRP ALA ARG PHE LEU ALA PHE GLU SER ASN ILE GLY ASP SEQRES 21 B 312 LEU ALA SER ILE LEU LYS VAL GLU LYS ARG ARG PHE THR SEQRES 22 B 312 ALA PHE LYS GLU GLU TYR GLU GLY LYS GLU THR ALA LEU SEQRES 23 B 312 LEU VAL ASP ARG TYR LYS PHE MET ASP LEU TYR PRO CYS SEQRES 24 B 312 SER ALA SER GLU LEU LYS ALA LEU GLY TYR LYS ASP VAL SEQRES 1 C 38 SER ASN ALA MET SER ALA GLY GLU VAL GLU ARG LEU VAL SEQRES 2 C 38 SER GLU LEU SER GLY GLY THR GLY GLY ASP GLU GLU GLU SEQRES 3 C 38 GLU TRP LEU TYR GLY ASP GLU ASN GLU VAL GLU ARG SEQRES 1 D 38 SER ASN ALA MET SER ALA GLY GLU VAL GLU ARG LEU VAL SEQRES 2 D 38 SER GLU LEU SER GLY GLY THR GLY GLY ASP GLU GLU GLU SEQRES 3 D 38 GLU TRP LEU TYR GLY ASP GLU ASN GLU VAL GLU ARG HET GOL A 601 14 HET GOL A 602 14 HET GOL A 603 14 HET GOL B 601 14 HET GOL B 602 14 HET GOL B 603 14 HET GOL B 604 14 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 GOL 7(C3 H8 O3) FORMUL 12 HOH *36(H2 O) HELIX 1 AA1 GLN A 244 SER A 261 1 18 HELIX 2 AA2 ASP A 268 GLY A 288 1 21 HELIX 3 AA3 HIS A 290 LYS A 311 1 22 HELIX 4 AA4 ASP A 313 THR A 334 1 22 HELIX 5 AA5 ASN A 339 ARG A 353 1 15 HELIX 6 AA6 LYS A 355 ALA A 368 1 14 HELIX 7 AA7 PRO A 374 GLY A 390 1 17 HELIX 8 AA8 GLY A 390 GLU A 403 1 14 HELIX 9 AA9 HIS A 409 CYS A 422 1 14 HELIX 10 AB1 ASP A 425 GLY A 441 1 17 HELIX 11 AB2 ILE A 443 LEU A 457 1 15 HELIX 12 AB3 GLU A 459 SER A 473 1 15 HELIX 13 AB4 PRO A 477 LYS A 480 5 4 HELIX 14 AB5 SER A 481 GLY A 496 1 16 HELIX 15 AB6 ASP A 497 PHE A 512 1 16 HELIX 16 AB7 LYS A 519 LYS A 529 1 11 HELIX 17 AB8 SER A 537 GLY A 545 1 9 HELIX 18 AB9 GLN B 244 SER B 261 1 18 HELIX 19 AC1 ASP B 268 GLY B 288 1 21 HELIX 20 AC2 HIS B 290 LYS B 311 1 22 HELIX 21 AC3 ASP B 313 THR B 334 1 22 HELIX 22 AC4 ASN B 339 ARG B 353 1 15 HELIX 23 AC5 LYS B 355 ILE B 369 1 15 HELIX 24 AC6 PRO B 374 GLY B 390 1 17 HELIX 25 AC7 GLY B 390 ASP B 404 1 15 HELIX 26 AC8 HIS B 409 SER B 423 1 15 HELIX 27 AC9 ASP B 425 GLY B 441 1 17 HELIX 28 AD1 ILE B 443 ASN B 458 1 16 HELIX 29 AD2 GLU B 459 GLY B 474 1 16 HELIX 30 AD3 PRO B 477 LYS B 480 5 4 HELIX 31 AD4 SER B 481 GLY B 496 1 16 HELIX 32 AD5 ASP B 497 PHE B 512 1 16 HELIX 33 AD6 LYS B 519 LYS B 529 1 11 HELIX 34 AD7 SER B 537 GLY B 545 1 9 HELIX 35 AD8 ASP C 20 TYR C 27 1 8 HELIX 36 AD9 GLU D 22 GLY D 28 1 7 CRYST1 157.612 157.612 161.005 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006345 0.003663 0.000000 0.00000 SCALE2 0.000000 0.007326 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006211 0.00000 MTRIX1 1 -0.982796 -0.182137 0.030643 12.34368 1 MTRIX2 1 -0.184342 0.957033 -0.223844 2.34422 1 MTRIX3 1 0.011444 -0.225641 -0.974143 10.40471 1