HEADER HYDROLASE 13-JUN-22 8A4V TITLE CRYSTAL STRUCTURE OF HUMAN CATHEPSIN L WITH COVALENTLY BOUND E-64 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATHEPSIN L; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CTSL, CTSL1; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PHAFFII GS115; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 644223 KEYWDS CYSTEIN PROTEASE, DRUG TARGET, LYSOSOME, VIRUS CELL ENTRY, HYDROLASE, KEYWDS 2 PROTEINASE INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR S.FALKE,J.LIESKE,S.GUENTHER,P.Y.A.REINKE,W.EWERT,J.LOBODA,K.KARNICAR, AUTHOR 2 A.USENIK,N.LINDIC,A.SEKIRNIK,H.N.CHAPMAN,W.HINRICHS,D.TURK,A.MEENTS REVDAT 2 07-FEB-24 8A4V 1 REMARK REVDAT 1 05-JUL-23 8A4V 0 JRNL AUTH S.FALKE,J.LIESKE,A.HERRMANN,S.GUENTHER,P.Y.A.REINKE,W.EWERT, JRNL AUTH 2 J.LOBODA,K.KARNICAR,A.USENIK,N.LINDIC,A.SEKIRNIK, JRNL AUTH 3 H.N.CHAPMAN,W.HINRICHS,D.TURK,A.MEENTS JRNL TITL STRUCTURAL ELUCIDATION OF ANTIVIRAL CATHEPSIN L INHIBITORS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18-3855_9999 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 95318 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.110 REMARK 3 FREE R VALUE TEST SET COUNT : 2011 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.4200 - 3.9800 0.98 6664 141 0.1443 0.1623 REMARK 3 2 3.9800 - 3.1600 0.99 6796 147 0.1257 0.1565 REMARK 3 3 3.1600 - 2.7600 0.99 6796 149 0.1407 0.1858 REMARK 3 4 2.7600 - 2.5100 0.96 6560 141 0.1449 0.2152 REMARK 3 5 2.5000 - 2.3300 0.99 6737 143 0.1447 0.1755 REMARK 3 6 2.3300 - 2.1900 0.98 6753 143 0.1478 0.2119 REMARK 3 7 2.1900 - 2.0800 0.98 6704 147 0.1612 0.2059 REMARK 3 8 2.0800 - 1.9900 0.98 6709 135 0.1718 0.2356 REMARK 3 9 1.9900 - 1.9100 0.98 6688 153 0.1973 0.2604 REMARK 3 10 1.9100 - 1.8500 0.94 6376 137 0.2393 0.2754 REMARK 3 11 1.8500 - 1.7900 0.97 6671 139 0.2509 0.3165 REMARK 3 12 1.7900 - 1.7400 0.97 6611 138 0.2616 0.2797 REMARK 3 13 1.7400 - 1.6900 0.97 6599 157 0.2704 0.3203 REMARK 3 14 1.6900 - 1.6500 0.97 6643 141 0.2708 0.2892 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.193 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.061 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.99 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 7271 REMARK 3 ANGLE : 0.890 9833 REMARK 3 CHIRALITY : 0.055 968 REMARK 3 PLANARITY : 0.006 1323 REMARK 3 DIHEDRAL : 7.586 1083 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 33 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.7169 -12.0708 -8.2908 REMARK 3 T TENSOR REMARK 3 T11: 0.1337 T22: 0.1269 REMARK 3 T33: 0.1057 T12: 0.0137 REMARK 3 T13: 0.0027 T23: -0.0190 REMARK 3 L TENSOR REMARK 3 L11: 3.1781 L22: 3.1030 REMARK 3 L33: 2.9924 L12: 0.9889 REMARK 3 L13: 0.3251 L23: 0.7817 REMARK 3 S TENSOR REMARK 3 S11: -0.0171 S12: 0.0095 S13: 0.0347 REMARK 3 S21: -0.0640 S22: 0.0440 S23: -0.1589 REMARK 3 S31: -0.1084 S32: -0.0261 S33: -0.0278 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 43 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.7566 -20.0133 -15.7435 REMARK 3 T TENSOR REMARK 3 T11: 0.1467 T22: 0.1648 REMARK 3 T33: 0.0807 T12: -0.0021 REMARK 3 T13: 0.0172 T23: -0.0304 REMARK 3 L TENSOR REMARK 3 L11: 5.3854 L22: 5.7711 REMARK 3 L33: 1.5070 L12: 3.0828 REMARK 3 L13: 2.4007 L23: 2.0244 REMARK 3 S TENSOR REMARK 3 S11: -0.0949 S12: 0.1278 S13: 0.1135 REMARK 3 S21: -0.2396 S22: 0.1025 S23: 0.1423 REMARK 3 S31: -0.0512 S32: -0.0750 S33: -0.0072 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 61 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.5731 -22.3682 -15.9542 REMARK 3 T TENSOR REMARK 3 T11: 0.1204 T22: 0.1441 REMARK 3 T33: 0.1526 T12: -0.0311 REMARK 3 T13: 0.0001 T23: -0.0425 REMARK 3 L TENSOR REMARK 3 L11: 2.7158 L22: 3.6664 REMARK 3 L33: 6.0893 L12: 0.1872 REMARK 3 L13: 1.3002 L23: -0.0078 REMARK 3 S TENSOR REMARK 3 S11: 0.0129 S12: 0.0117 S13: -0.0702 REMARK 3 S21: -0.0812 S22: 0.0246 S23: 0.0144 REMARK 3 S31: 0.0331 S32: -0.3288 S33: -0.0438 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 105 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.7034 -21.1062 -4.0719 REMARK 3 T TENSOR REMARK 3 T11: 0.1514 T22: 0.1822 REMARK 3 T33: 0.3199 T12: 0.0450 REMARK 3 T13: -0.0426 T23: -0.0520 REMARK 3 L TENSOR REMARK 3 L11: 1.9505 L22: 2.0894 REMARK 3 L33: 5.9117 L12: 0.7351 REMARK 3 L13: 1.5351 L23: 0.8068 REMARK 3 S TENSOR REMARK 3 S11: 0.2477 S12: -0.0507 S13: -0.4177 REMARK 3 S21: 0.1788 S22: 0.1984 S23: -0.5564 REMARK 3 S31: 0.4639 S32: 0.2389 S33: -0.4403 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 129 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6571 -11.1326 7.6805 REMARK 3 T TENSOR REMARK 3 T11: 0.1603 T22: 0.2591 REMARK 3 T33: 0.1643 T12: -0.0191 REMARK 3 T13: -0.0022 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 1.1615 L22: 1.5601 REMARK 3 L33: 3.4884 L12: 0.5000 REMARK 3 L13: 1.3219 L23: 1.7200 REMARK 3 S TENSOR REMARK 3 S11: 0.1589 S12: -0.3788 S13: -0.0357 REMARK 3 S21: 0.2242 S22: -0.1499 S23: 0.0824 REMARK 3 S31: 0.1966 S32: -0.6847 S33: -0.0219 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 187 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.2591 -13.0781 2.3233 REMARK 3 T TENSOR REMARK 3 T11: 0.1214 T22: 0.1650 REMARK 3 T33: 0.1422 T12: -0.0477 REMARK 3 T13: 0.0055 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 3.9383 L22: 2.8655 REMARK 3 L33: 3.2140 L12: -0.1506 REMARK 3 L13: 1.1792 L23: 1.3945 REMARK 3 S TENSOR REMARK 3 S11: 0.0955 S12: -0.3356 S13: -0.0009 REMARK 3 S21: 0.1752 S22: -0.0558 S23: -0.2008 REMARK 3 S31: 0.1649 S32: -0.2276 S33: -0.0321 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.5439 6.4322 17.4669 REMARK 3 T TENSOR REMARK 3 T11: 0.0834 T22: 0.1342 REMARK 3 T33: 0.0747 T12: 0.0042 REMARK 3 T13: 0.0197 T23: -0.0005 REMARK 3 L TENSOR REMARK 3 L11: 3.3170 L22: 4.4306 REMARK 3 L33: 2.3627 L12: -0.0250 REMARK 3 L13: -0.1809 L23: 0.3356 REMARK 3 S TENSOR REMARK 3 S11: 0.0122 S12: 0.0953 S13: 0.1836 REMARK 3 S21: -0.1419 S22: 0.0186 S23: -0.1352 REMARK 3 S31: -0.1175 S32: -0.0212 S33: 0.0129 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 25 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.7294 2.4005 23.3697 REMARK 3 T TENSOR REMARK 3 T11: 0.1008 T22: 0.1009 REMARK 3 T33: 0.1095 T12: 0.0049 REMARK 3 T13: 0.0174 T23: 0.0210 REMARK 3 L TENSOR REMARK 3 L11: 2.3116 L22: 5.4078 REMARK 3 L33: 5.8887 L12: -0.5794 REMARK 3 L13: -0.3381 L23: 4.0022 REMARK 3 S TENSOR REMARK 3 S11: 0.0889 S12: -0.0582 S13: 0.0337 REMARK 3 S21: 0.0257 S22: -0.1158 S23: 0.0274 REMARK 3 S31: -0.0871 S32: -0.1466 S33: 0.0538 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 43 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): 47.8037 -7.7368 24.0474 REMARK 3 T TENSOR REMARK 3 T11: 0.1187 T22: 0.1069 REMARK 3 T33: 0.1340 T12: 0.0256 REMARK 3 T13: -0.0027 T23: 0.0233 REMARK 3 L TENSOR REMARK 3 L11: 2.1846 L22: 2.9267 REMARK 3 L33: 1.8087 L12: 1.6292 REMARK 3 L13: 0.5909 L23: 0.3028 REMARK 3 S TENSOR REMARK 3 S11: 0.0213 S12: 0.0067 S13: -0.1644 REMARK 3 S21: 0.0294 S22: 0.0677 S23: -0.1562 REMARK 3 S31: 0.1101 S32: 0.0402 S33: -0.0931 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 81 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.9938 -9.6647 32.0538 REMARK 3 T TENSOR REMARK 3 T11: 0.1629 T22: 0.1524 REMARK 3 T33: 0.1582 T12: 0.0162 REMARK 3 T13: -0.0659 T23: 0.0376 REMARK 3 L TENSOR REMARK 3 L11: 7.6027 L22: 4.1540 REMARK 3 L33: 6.5123 L12: -1.0065 REMARK 3 L13: -4.1000 L23: -0.4296 REMARK 3 S TENSOR REMARK 3 S11: -0.0779 S12: -0.1921 S13: -0.2304 REMARK 3 S21: 0.1575 S22: -0.0487 S23: -0.1904 REMARK 3 S31: 0.1692 S32: 0.1622 S33: 0.1120 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 105 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.4316 5.2661 15.6443 REMARK 3 T TENSOR REMARK 3 T11: 0.0843 T22: 0.1361 REMARK 3 T33: 0.1484 T12: 0.0411 REMARK 3 T13: 0.0056 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 2.3420 L22: 2.5205 REMARK 3 L33: 5.1848 L12: 0.5366 REMARK 3 L13: 0.0101 L23: -2.0273 REMARK 3 S TENSOR REMARK 3 S11: -0.0010 S12: 0.3267 S13: 0.1408 REMARK 3 S21: -0.1175 S22: 0.1949 S23: 0.1730 REMARK 3 S31: 0.0242 S32: -0.2998 S33: -0.2129 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 129 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.7237 -1.6278 7.2821 REMARK 3 T TENSOR REMARK 3 T11: 0.1361 T22: 0.1568 REMARK 3 T33: 0.1422 T12: 0.0068 REMARK 3 T13: 0.0153 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 3.9145 L22: 2.7907 REMARK 3 L33: 3.2914 L12: -0.7853 REMARK 3 L13: -0.8064 L23: 0.7434 REMARK 3 S TENSOR REMARK 3 S11: 0.0568 S12: 0.4880 S13: -0.2204 REMARK 3 S21: -0.2455 S22: -0.0650 S23: -0.1953 REMARK 3 S31: 0.1346 S32: -0.0746 S33: 0.0012 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 145 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.1488 5.9783 3.5591 REMARK 3 T TENSOR REMARK 3 T11: 0.1424 T22: 0.2064 REMARK 3 T33: 0.1198 T12: -0.0103 REMARK 3 T13: 0.0023 T23: 0.0125 REMARK 3 L TENSOR REMARK 3 L11: 2.8395 L22: 3.5089 REMARK 3 L33: 2.8731 L12: -0.4300 REMARK 3 L13: -0.2863 L23: 1.1215 REMARK 3 S TENSOR REMARK 3 S11: 0.0130 S12: 0.5098 S13: 0.0918 REMARK 3 S21: -0.3593 S22: 0.0789 S23: -0.0401 REMARK 3 S31: -0.1466 S32: 0.0414 S33: -0.0450 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 187 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): 65.4920 0.6799 12.9298 REMARK 3 T TENSOR REMARK 3 T11: 0.1926 T22: 0.1946 REMARK 3 T33: 0.1805 T12: -0.0050 REMARK 3 T13: -0.0003 T23: 0.0014 REMARK 3 L TENSOR REMARK 3 L11: 2.3062 L22: 6.9527 REMARK 3 L33: 4.3676 L12: 3.0895 REMARK 3 L13: -2.9862 L23: -2.9346 REMARK 3 S TENSOR REMARK 3 S11: -0.0228 S12: -0.1275 S13: -0.0726 REMARK 3 S21: 0.3505 S22: -0.0708 S23: -0.1212 REMARK 3 S31: -0.2597 S32: 0.3578 S33: 0.1092 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 198 THROUGH 207 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.2808 6.3193 2.7637 REMARK 3 T TENSOR REMARK 3 T11: 0.1757 T22: 0.1938 REMARK 3 T33: 0.1368 T12: 0.0130 REMARK 3 T13: 0.0431 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 5.5517 L22: 2.2237 REMARK 3 L33: 5.1210 L12: -1.6704 REMARK 3 L13: 3.9011 L23: -2.9213 REMARK 3 S TENSOR REMARK 3 S11: 0.0334 S12: 0.6240 S13: 0.0189 REMARK 3 S21: -0.1294 S22: -0.0067 S23: 0.0274 REMARK 3 S31: -0.1491 S32: 0.3316 S33: -0.0182 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 208 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.4051 2.0566 11.5921 REMARK 3 T TENSOR REMARK 3 T11: 0.1420 T22: 0.1417 REMARK 3 T33: 0.1522 T12: 0.0100 REMARK 3 T13: -0.0137 T23: 0.0152 REMARK 3 L TENSOR REMARK 3 L11: 6.2463 L22: 1.9580 REMARK 3 L33: 6.6574 L12: -0.2343 REMARK 3 L13: -5.3297 L23: -0.0111 REMARK 3 S TENSOR REMARK 3 S11: 0.0835 S12: 0.1817 S13: 0.0441 REMARK 3 S21: -0.0956 S22: 0.0430 S23: 0.0172 REMARK 3 S31: -0.2288 S32: -0.0310 S33: -0.1318 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.3801 5.8606 -12.2305 REMARK 3 T TENSOR REMARK 3 T11: 0.1599 T22: 0.1923 REMARK 3 T33: 0.1244 T12: -0.0170 REMARK 3 T13: 0.0587 T23: 0.0072 REMARK 3 L TENSOR REMARK 3 L11: 4.1660 L22: 4.3278 REMARK 3 L33: 3.2400 L12: 1.9238 REMARK 3 L13: 1.1823 L23: 0.4012 REMARK 3 S TENSOR REMARK 3 S11: 0.1031 S12: -0.0803 S13: -0.1292 REMARK 3 S21: 0.0501 S22: -0.1011 S23: 0.1158 REMARK 3 S31: 0.3128 S32: -0.3678 S33: -0.0252 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 25 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.5171 9.5169 -17.9516 REMARK 3 T TENSOR REMARK 3 T11: 0.1869 T22: 0.1543 REMARK 3 T33: 0.1496 T12: -0.0094 REMARK 3 T13: 0.0176 T23: 0.0127 REMARK 3 L TENSOR REMARK 3 L11: 2.9899 L22: 3.8736 REMARK 3 L33: 8.2856 L12: 2.0965 REMARK 3 L13: 2.5363 L23: 5.5775 REMARK 3 S TENSOR REMARK 3 S11: -0.1115 S12: 0.1357 S13: -0.1869 REMARK 3 S21: -0.1241 S22: 0.1132 S23: -0.0087 REMARK 3 S31: 0.0357 S32: 0.0898 S33: -0.0186 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 43 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.5636 17.6005 -15.5170 REMARK 3 T TENSOR REMARK 3 T11: 0.1436 T22: 0.1717 REMARK 3 T33: 0.1057 T12: -0.0022 REMARK 3 T13: 0.0008 T23: 0.0091 REMARK 3 L TENSOR REMARK 3 L11: 3.4432 L22: 5.1271 REMARK 3 L33: 1.6748 L12: 1.5590 REMARK 3 L13: 0.3317 L23: -0.0933 REMARK 3 S TENSOR REMARK 3 S11: -0.0723 S12: -0.0060 S13: 0.1050 REMARK 3 S21: 0.1180 S22: -0.0066 S23: -0.1498 REMARK 3 S31: -0.1049 S32: 0.1448 S33: 0.0757 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 81 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.4653 12.0488 -11.8417 REMARK 3 T TENSOR REMARK 3 T11: 0.1149 T22: 0.2047 REMARK 3 T33: 0.1796 T12: 0.0311 REMARK 3 T13: -0.0239 T23: 0.0246 REMARK 3 L TENSOR REMARK 3 L11: 5.7630 L22: 3.7943 REMARK 3 L33: 7.3814 L12: 0.3031 REMARK 3 L13: -1.6538 L23: -0.3734 REMARK 3 S TENSOR REMARK 3 S11: -0.0994 S12: -0.3739 S13: -0.3186 REMARK 3 S21: 0.1378 S22: -0.0648 S23: -0.2890 REMARK 3 S31: 0.2663 S32: 0.5475 S33: 0.0818 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 105 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.5217 16.8523 -23.4594 REMARK 3 T TENSOR REMARK 3 T11: 0.2152 T22: 0.2047 REMARK 3 T33: 0.1431 T12: -0.0403 REMARK 3 T13: -0.0203 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 9.1156 L22: 3.9179 REMARK 3 L33: 4.0313 L12: -3.4120 REMARK 3 L13: 0.5059 L23: -1.8518 REMARK 3 S TENSOR REMARK 3 S11: 0.2239 S12: 0.9799 S13: 0.4480 REMARK 3 S21: -0.1834 S22: -0.2314 S23: -0.0592 REMARK 3 S31: -0.1567 S32: -0.2135 S33: -0.0008 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 119 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.3731 12.5381 -22.4508 REMARK 3 T TENSOR REMARK 3 T11: 0.2285 T22: 0.3426 REMARK 3 T33: 0.2305 T12: -0.0163 REMARK 3 T13: -0.0053 T23: 0.0544 REMARK 3 L TENSOR REMARK 3 L11: 4.5389 L22: 4.7467 REMARK 3 L33: 8.3598 L12: -4.6341 REMARK 3 L13: -6.1595 L23: 6.2865 REMARK 3 S TENSOR REMARK 3 S11: 0.1225 S12: 0.2975 S13: 0.0081 REMARK 3 S21: -0.4055 S22: -0.0016 S23: 0.2711 REMARK 3 S31: -0.2482 S32: -0.6039 S33: -0.0414 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 130 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.2436 12.5122 -6.3025 REMARK 3 T TENSOR REMARK 3 T11: 0.1492 T22: 0.2146 REMARK 3 T33: 0.1558 T12: -0.0100 REMARK 3 T13: 0.0420 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 2.8905 L22: 2.0794 REMARK 3 L33: 3.5068 L12: 0.2975 REMARK 3 L13: -0.4653 L23: 0.1885 REMARK 3 S TENSOR REMARK 3 S11: -0.0190 S12: -0.0300 S13: 0.0441 REMARK 3 S21: 0.1816 S22: -0.0068 S23: 0.2457 REMARK 3 S31: 0.0251 S32: -0.4673 S33: 0.0096 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 198 THROUGH 207 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.1835 13.7682 -9.5989 REMARK 3 T TENSOR REMARK 3 T11: 0.1719 T22: 0.2547 REMARK 3 T33: 0.1618 T12: -0.0229 REMARK 3 T13: 0.0395 T23: -0.0205 REMARK 3 L TENSOR REMARK 3 L11: 6.6694 L22: 3.8412 REMARK 3 L33: 3.9882 L12: -1.7479 REMARK 3 L13: 2.2434 L23: -2.6127 REMARK 3 S TENSOR REMARK 3 S11: 0.1002 S12: 0.0872 S13: -0.1347 REMARK 3 S21: -0.1551 S22: 0.1001 S23: 0.4330 REMARK 3 S31: 0.0454 S32: -0.5360 S33: -0.1717 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 208 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.9308 17.4338 -17.9352 REMARK 3 T TENSOR REMARK 3 T11: 0.1725 T22: 0.1786 REMARK 3 T33: 0.1536 T12: -0.0081 REMARK 3 T13: -0.0186 T23: 0.0519 REMARK 3 L TENSOR REMARK 3 L11: 8.0825 L22: 2.6350 REMARK 3 L33: 8.1861 L12: -0.4741 REMARK 3 L13: -4.7792 L23: 0.1807 REMARK 3 S TENSOR REMARK 3 S11: 0.1270 S12: 0.3730 S13: 0.2419 REMARK 3 S21: 0.0254 S22: 0.0685 S23: 0.0324 REMARK 3 S31: 0.1124 S32: -0.4173 S33: -0.1795 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.6254 11.9072 24.6718 REMARK 3 T TENSOR REMARK 3 T11: 0.1340 T22: 0.1084 REMARK 3 T33: 0.0958 T12: 0.0357 REMARK 3 T13: 0.0109 T23: -0.0310 REMARK 3 L TENSOR REMARK 3 L11: 2.5538 L22: 3.3587 REMARK 3 L33: 3.3580 L12: 0.0993 REMARK 3 L13: 0.3376 L23: -1.6571 REMARK 3 S TENSOR REMARK 3 S11: 0.1048 S12: -0.0309 S13: -0.0426 REMARK 3 S21: -0.0367 S22: -0.0577 S23: 0.1884 REMARK 3 S31: 0.0700 S32: -0.0461 S33: -0.0792 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 25 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.7523 20.0812 30.1588 REMARK 3 T TENSOR REMARK 3 T11: 0.1652 T22: 0.0963 REMARK 3 T33: 0.1325 T12: 0.0220 REMARK 3 T13: 0.0005 T23: -0.0070 REMARK 3 L TENSOR REMARK 3 L11: 5.7835 L22: 4.0812 REMARK 3 L33: 7.2419 L12: 3.7233 REMARK 3 L13: -4.7231 L23: -4.2768 REMARK 3 S TENSOR REMARK 3 S11: -0.0326 S12: 0.0034 S13: -0.1256 REMARK 3 S21: 0.0652 S22: -0.1029 S23: -0.0916 REMARK 3 S31: -0.0272 S32: -0.1058 S33: 0.1435 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 43 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.4813 28.2723 26.4279 REMARK 3 T TENSOR REMARK 3 T11: 0.1680 T22: 0.1365 REMARK 3 T33: 0.1732 T12: 0.0276 REMARK 3 T13: -0.0048 T23: -0.0144 REMARK 3 L TENSOR REMARK 3 L11: 2.9185 L22: 2.9764 REMARK 3 L33: 0.7207 L12: 2.7435 REMARK 3 L13: -0.2205 L23: -0.6318 REMARK 3 S TENSOR REMARK 3 S11: -0.0738 S12: 0.0724 S13: 0.0157 REMARK 3 S21: -0.0815 S22: 0.0196 S23: 0.0756 REMARK 3 S31: -0.0073 S32: -0.0457 S33: -0.0709 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 61 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.4733 30.4090 28.2903 REMARK 3 T TENSOR REMARK 3 T11: 0.1616 T22: 0.0885 REMARK 3 T33: 0.1648 T12: 0.0030 REMARK 3 T13: -0.0243 T23: 0.0159 REMARK 3 L TENSOR REMARK 3 L11: 4.2498 L22: 3.3464 REMARK 3 L33: 5.5888 L12: -1.1251 REMARK 3 L13: -1.5789 L23: 1.9558 REMARK 3 S TENSOR REMARK 3 S11: -0.0528 S12: 0.0882 S13: 0.0629 REMARK 3 S21: 0.0255 S22: -0.0411 S23: -0.0864 REMARK 3 S31: -0.0930 S32: 0.1569 S33: 0.0965 REMARK 3 TLS GROUP : 30 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 81 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.4210 32.7408 23.3276 REMARK 3 T TENSOR REMARK 3 T11: 0.1797 T22: 0.1860 REMARK 3 T33: 0.2294 T12: 0.0327 REMARK 3 T13: -0.0188 T23: 0.0066 REMARK 3 L TENSOR REMARK 3 L11: 1.0276 L22: 5.9326 REMARK 3 L33: 2.3168 L12: -0.5792 REMARK 3 L13: -0.7828 L23: 2.4270 REMARK 3 S TENSOR REMARK 3 S11: 0.0927 S12: 0.1269 S13: 0.1542 REMARK 3 S21: -0.2893 S22: -0.0549 S23: 0.2971 REMARK 3 S31: -0.3135 S32: -0.0881 S33: -0.0621 REMARK 3 TLS GROUP : 31 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 105 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.0707 15.9627 35.4571 REMARK 3 T TENSOR REMARK 3 T11: 0.2089 T22: 0.1648 REMARK 3 T33: 0.0856 T12: 0.0022 REMARK 3 T13: -0.0216 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 5.8646 L22: 3.9366 REMARK 3 L33: 0.7968 L12: -2.7558 REMARK 3 L13: 0.0250 L23: 0.3887 REMARK 3 S TENSOR REMARK 3 S11: -0.1644 S12: -0.2891 S13: 0.1949 REMARK 3 S21: 0.4739 S22: 0.1550 S23: -0.2989 REMARK 3 S31: -0.0125 S32: 0.1368 S33: -0.0069 REMARK 3 TLS GROUP : 32 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 129 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.9129 8.7088 19.2890 REMARK 3 T TENSOR REMARK 3 T11: 0.1016 T22: 0.1009 REMARK 3 T33: 0.1228 T12: 0.0214 REMARK 3 T13: -0.0052 T23: 0.0123 REMARK 3 L TENSOR REMARK 3 L11: 1.4718 L22: 1.9068 REMARK 3 L33: 2.7957 L12: -0.0924 REMARK 3 L13: -0.6744 L23: 0.2522 REMARK 3 S TENSOR REMARK 3 S11: -0.0316 S12: 0.0780 S13: -0.0696 REMARK 3 S21: -0.0295 S22: -0.0042 S23: -0.1060 REMARK 3 S31: 0.1386 S32: 0.1652 S33: 0.0108 REMARK 3 TLS GROUP : 33 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 198 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6673 11.4356 27.1608 REMARK 3 T TENSOR REMARK 3 T11: 0.1575 T22: 0.1112 REMARK 3 T33: 0.1147 T12: 0.0072 REMARK 3 T13: 0.0006 T23: 0.0303 REMARK 3 L TENSOR REMARK 3 L11: 2.6349 L22: 2.6090 REMARK 3 L33: 1.1822 L12: -0.8782 REMARK 3 L13: 0.0783 L23: 0.9461 REMARK 3 S TENSOR REMARK 3 S11: -0.0802 S12: -0.0782 S13: 0.0681 REMARK 3 S21: 0.1938 S22: 0.1180 S23: -0.1426 REMARK 3 S31: 0.0842 S32: 0.1345 S33: -0.0235 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8A4V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1292123519. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-OCT-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, DESY REMARK 200 BEAMLINE : P11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 95327 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 44.420 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.31060 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.9700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.71 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.20 REMARK 200 R MERGE FOR SHELL (I) : 2.57400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.150 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3OF9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MATURE CATHEPSIN L AT A CONCENTRATION REMARK 280 OF 7 MG/ML WAS EQUILIBRATED AGAINST 27% W/V PEG 8000, 1 MM TCEP REMARK 280 AND 0.1 M SODIUM ACETATE AT PH 4.0. CRYSTALS, WHICH GREW AT 293 REMARK 280 K TO FINAL SIZE AFTER APPROXIMATELY 3 DAYS, WERE TRANSFERRED TO REMARK 280 A COMPOUND SOAKING SOLUTION CONTAINING 22% W/V PEG 8000, 1 MM REMARK 280 TCEP AND 0.1 M SODIUM ACETATE AT PH 4.0 AS WELL AS 5% V/V DMSO REMARK 280 AND 10% V/V PEG 400., VAPOR DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 21 31.79 -97.41 REMARK 500 ARG A 205 68.76 -118.22 REMARK 500 ALA A 214 60.84 -150.43 REMARK 500 GLN B 21 32.34 -94.09 REMARK 500 ALA B 214 54.18 -149.90 REMARK 500 ARG C 205 64.84 -117.50 REMARK 500 ALA C 214 60.60 -150.62 REMARK 500 GLN D 21 35.81 -92.43 REMARK 500 PRO D 116 150.46 -50.00 REMARK 500 ASP D 160 76.69 -109.13 REMARK 500 SER D 174 -165.09 67.18 REMARK 500 ARG D 205 51.84 -118.35 REMARK 500 ALA D 214 59.09 -148.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH D 625 DISTANCE = 6.07 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7ZS7 RELATED DB: PDB REMARK 900 CATL WITH CALPAIN INH VI REMARK 900 RELATED ID: 7ZVF RELATED DB: PDB REMARK 900 CATL WITH CLIK148 REMARK 900 RELATED ID: 7ZXA RELATED DB: PDB REMARK 900 CATL WITH ALOXISTATIN REMARK 900 RELATED ID: 8A4U RELATED DB: PDB DBREF 8A4V A 1 220 UNP P07711 CATL1_HUMAN 114 333 DBREF 8A4V B 1 220 UNP P07711 CATL1_HUMAN 114 333 DBREF 8A4V C 1 220 UNP P07711 CATL1_HUMAN 114 333 DBREF 8A4V D 1 220 UNP P07711 CATL1_HUMAN 114 333 SEQADV 8A4V ALA A 110 UNP P07711 THR 223 ENGINEERED MUTATION SEQADV 8A4V ALA B 110 UNP P07711 THR 223 ENGINEERED MUTATION SEQADV 8A4V ALA C 110 UNP P07711 THR 223 ENGINEERED MUTATION SEQADV 8A4V ALA D 110 UNP P07711 THR 223 ENGINEERED MUTATION SEQRES 1 A 220 ALA PRO ARG SER VAL ASP TRP ARG GLU LYS GLY TYR VAL SEQRES 2 A 220 THR PRO VAL LYS ASN GLN GLY GLN CYS GLY SER CYS TRP SEQRES 3 A 220 ALA PHE SER ALA THR GLY ALA LEU GLU GLY GLN MET PHE SEQRES 4 A 220 ARG LYS THR GLY ARG LEU ILE SER LEU SER GLU GLN ASN SEQRES 5 A 220 LEU VAL ASP CYS SER GLY PRO GLN GLY ASN GLU GLY CYS SEQRES 6 A 220 ASN GLY GLY LEU MET ASP TYR ALA PHE GLN TYR VAL GLN SEQRES 7 A 220 ASP ASN GLY GLY LEU ASP SER GLU GLU SER TYR PRO TYR SEQRES 8 A 220 GLU ALA THR GLU GLU SER CYS LYS TYR ASN PRO LYS TYR SEQRES 9 A 220 SER VAL ALA ASN ASP ALA GLY PHE VAL ASP ILE PRO LYS SEQRES 10 A 220 GLN GLU LYS ALA LEU MET LYS ALA VAL ALA THR VAL GLY SEQRES 11 A 220 PRO ILE SER VAL ALA ILE ASP ALA GLY HIS GLU SER PHE SEQRES 12 A 220 LEU PHE TYR LYS GLU GLY ILE TYR PHE GLU PRO ASP CYS SEQRES 13 A 220 SER SER GLU ASP MET ASP HIS GLY VAL LEU VAL VAL GLY SEQRES 14 A 220 TYR GLY PHE GLU SER THR GLU SER ASP ASN ASN LYS TYR SEQRES 15 A 220 TRP LEU VAL LYS ASN SER TRP GLY GLU GLU TRP GLY MET SEQRES 16 A 220 GLY GLY TYR VAL LYS MET ALA LYS ASP ARG ARG ASN HIS SEQRES 17 A 220 CYS GLY ILE ALA SER ALA ALA SER TYR PRO THR VAL SEQRES 1 B 220 ALA PRO ARG SER VAL ASP TRP ARG GLU LYS GLY TYR VAL SEQRES 2 B 220 THR PRO VAL LYS ASN GLN GLY GLN CYS GLY SER CYS TRP SEQRES 3 B 220 ALA PHE SER ALA THR GLY ALA LEU GLU GLY GLN MET PHE SEQRES 4 B 220 ARG LYS THR GLY ARG LEU ILE SER LEU SER GLU GLN ASN SEQRES 5 B 220 LEU VAL ASP CYS SER GLY PRO GLN GLY ASN GLU GLY CYS SEQRES 6 B 220 ASN GLY GLY LEU MET ASP TYR ALA PHE GLN TYR VAL GLN SEQRES 7 B 220 ASP ASN GLY GLY LEU ASP SER GLU GLU SER TYR PRO TYR SEQRES 8 B 220 GLU ALA THR GLU GLU SER CYS LYS TYR ASN PRO LYS TYR SEQRES 9 B 220 SER VAL ALA ASN ASP ALA GLY PHE VAL ASP ILE PRO LYS SEQRES 10 B 220 GLN GLU LYS ALA LEU MET LYS ALA VAL ALA THR VAL GLY SEQRES 11 B 220 PRO ILE SER VAL ALA ILE ASP ALA GLY HIS GLU SER PHE SEQRES 12 B 220 LEU PHE TYR LYS GLU GLY ILE TYR PHE GLU PRO ASP CYS SEQRES 13 B 220 SER SER GLU ASP MET ASP HIS GLY VAL LEU VAL VAL GLY SEQRES 14 B 220 TYR GLY PHE GLU SER THR GLU SER ASP ASN ASN LYS TYR SEQRES 15 B 220 TRP LEU VAL LYS ASN SER TRP GLY GLU GLU TRP GLY MET SEQRES 16 B 220 GLY GLY TYR VAL LYS MET ALA LYS ASP ARG ARG ASN HIS SEQRES 17 B 220 CYS GLY ILE ALA SER ALA ALA SER TYR PRO THR VAL SEQRES 1 C 220 ALA PRO ARG SER VAL ASP TRP ARG GLU LYS GLY TYR VAL SEQRES 2 C 220 THR PRO VAL LYS ASN GLN GLY GLN CYS GLY SER CYS TRP SEQRES 3 C 220 ALA PHE SER ALA THR GLY ALA LEU GLU GLY GLN MET PHE SEQRES 4 C 220 ARG LYS THR GLY ARG LEU ILE SER LEU SER GLU GLN ASN SEQRES 5 C 220 LEU VAL ASP CYS SER GLY PRO GLN GLY ASN GLU GLY CYS SEQRES 6 C 220 ASN GLY GLY LEU MET ASP TYR ALA PHE GLN TYR VAL GLN SEQRES 7 C 220 ASP ASN GLY GLY LEU ASP SER GLU GLU SER TYR PRO TYR SEQRES 8 C 220 GLU ALA THR GLU GLU SER CYS LYS TYR ASN PRO LYS TYR SEQRES 9 C 220 SER VAL ALA ASN ASP ALA GLY PHE VAL ASP ILE PRO LYS SEQRES 10 C 220 GLN GLU LYS ALA LEU MET LYS ALA VAL ALA THR VAL GLY SEQRES 11 C 220 PRO ILE SER VAL ALA ILE ASP ALA GLY HIS GLU SER PHE SEQRES 12 C 220 LEU PHE TYR LYS GLU GLY ILE TYR PHE GLU PRO ASP CYS SEQRES 13 C 220 SER SER GLU ASP MET ASP HIS GLY VAL LEU VAL VAL GLY SEQRES 14 C 220 TYR GLY PHE GLU SER THR GLU SER ASP ASN ASN LYS TYR SEQRES 15 C 220 TRP LEU VAL LYS ASN SER TRP GLY GLU GLU TRP GLY MET SEQRES 16 C 220 GLY GLY TYR VAL LYS MET ALA LYS ASP ARG ARG ASN HIS SEQRES 17 C 220 CYS GLY ILE ALA SER ALA ALA SER TYR PRO THR VAL SEQRES 1 D 220 ALA PRO ARG SER VAL ASP TRP ARG GLU LYS GLY TYR VAL SEQRES 2 D 220 THR PRO VAL LYS ASN GLN GLY GLN CYS GLY SER CYS TRP SEQRES 3 D 220 ALA PHE SER ALA THR GLY ALA LEU GLU GLY GLN MET PHE SEQRES 4 D 220 ARG LYS THR GLY ARG LEU ILE SER LEU SER GLU GLN ASN SEQRES 5 D 220 LEU VAL ASP CYS SER GLY PRO GLN GLY ASN GLU GLY CYS SEQRES 6 D 220 ASN GLY GLY LEU MET ASP TYR ALA PHE GLN TYR VAL GLN SEQRES 7 D 220 ASP ASN GLY GLY LEU ASP SER GLU GLU SER TYR PRO TYR SEQRES 8 D 220 GLU ALA THR GLU GLU SER CYS LYS TYR ASN PRO LYS TYR SEQRES 9 D 220 SER VAL ALA ASN ASP ALA GLY PHE VAL ASP ILE PRO LYS SEQRES 10 D 220 GLN GLU LYS ALA LEU MET LYS ALA VAL ALA THR VAL GLY SEQRES 11 D 220 PRO ILE SER VAL ALA ILE ASP ALA GLY HIS GLU SER PHE SEQRES 12 D 220 LEU PHE TYR LYS GLU GLY ILE TYR PHE GLU PRO ASP CYS SEQRES 13 D 220 SER SER GLU ASP MET ASP HIS GLY VAL LEU VAL VAL GLY SEQRES 14 D 220 TYR GLY PHE GLU SER THR GLU SER ASP ASN ASN LYS TYR SEQRES 15 D 220 TRP LEU VAL LYS ASN SER TRP GLY GLU GLU TRP GLY MET SEQRES 16 D 220 GLY GLY TYR VAL LYS MET ALA LYS ASP ARG ARG ASN HIS SEQRES 17 D 220 CYS GLY ILE ALA SER ALA ALA SER TYR PRO THR VAL HET E64 A 301 54 HET PEG A 302 17 HET PEG A 303 17 HET E64 B 301 54 HET PEG B 302 17 HET DMS B 303 10 HET DMS B 304 10 HET E64 C 301 54 HET PGE C 302 24 HET PEG C 303 17 HET E64 D 301 54 HET PEG D 302 17 HET DMS D 303 10 HETNAM E64 N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO- HETNAM 2 E64 BUTYL]-GUANIDINE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM DMS DIMETHYL SULFOXIDE HETNAM PGE TRIETHYLENE GLYCOL FORMUL 5 E64 4(C15 H30 N5 O5 1+) FORMUL 6 PEG 5(C4 H10 O3) FORMUL 10 DMS 3(C2 H6 O S) FORMUL 13 PGE C6 H14 O4 FORMUL 18 HOH *798(H2 O) HELIX 1 AA1 ARG A 8 GLY A 11 5 4 HELIX 2 AA2 SER A 24 GLY A 43 1 20 HELIX 3 AA3 SER A 49 SER A 57 1 9 HELIX 4 AA4 GLY A 58 GLY A 61 5 4 HELIX 5 AA5 GLU A 63 GLY A 67 5 5 HELIX 6 AA6 LEU A 69 GLY A 81 1 13 HELIX 7 AA7 ASN A 101 LYS A 103 5 3 HELIX 8 AA8 GLN A 118 VAL A 129 1 12 HELIX 9 AA9 HIS A 140 PHE A 145 1 6 HELIX 10 AB1 ASN A 207 ILE A 211 5 5 HELIX 11 AB2 ARG B 8 GLY B 11 5 4 HELIX 12 AB3 SER B 24 GLY B 43 1 20 HELIX 13 AB4 SER B 49 SER B 57 1 9 HELIX 14 AB5 GLY B 58 GLY B 61 5 4 HELIX 15 AB6 GLU B 63 GLY B 67 5 5 HELIX 16 AB7 LEU B 69 GLY B 81 1 13 HELIX 17 AB8 ASN B 101 LYS B 103 5 3 HELIX 18 AB9 GLN B 118 VAL B 129 1 12 HELIX 19 AC1 HIS B 140 PHE B 145 1 6 HELIX 20 AC2 ASN B 207 ILE B 211 5 5 HELIX 21 AC3 ARG C 8 GLY C 11 5 4 HELIX 22 AC4 SER C 24 GLY C 43 1 20 HELIX 23 AC5 SER C 49 SER C 57 1 9 HELIX 24 AC6 GLY C 58 GLY C 61 5 4 HELIX 25 AC7 GLU C 63 GLY C 67 5 5 HELIX 26 AC8 LEU C 69 GLY C 81 1 13 HELIX 27 AC9 ASN C 101 LYS C 103 5 3 HELIX 28 AD1 GLN C 118 GLY C 130 1 13 HELIX 29 AD2 HIS C 140 PHE C 145 1 6 HELIX 30 AD3 ASN C 207 ILE C 211 5 5 HELIX 31 AD4 ARG D 8 GLY D 11 5 4 HELIX 32 AD5 SER D 24 GLY D 43 1 20 HELIX 33 AD6 SER D 49 SER D 57 1 9 HELIX 34 AD7 GLY D 58 GLY D 61 5 4 HELIX 35 AD8 GLU D 63 GLY D 67 5 5 HELIX 36 AD9 LEU D 69 GLY D 81 1 13 HELIX 37 AE1 ASN D 101 LYS D 103 5 3 HELIX 38 AE2 GLN D 118 VAL D 129 1 12 HELIX 39 AE3 HIS D 140 PHE D 145 1 6 HELIX 40 AE4 THR D 175 ASN D 179 5 5 HELIX 41 AE5 ASN D 207 ILE D 211 5 5 SHEET 1 AA1 3 VAL A 5 ASP A 6 0 SHEET 2 AA1 3 HIS A 163 PHE A 172 -1 O TYR A 170 N VAL A 5 SHEET 3 AA1 3 ILE A 132 ILE A 136 -1 N ILE A 132 O VAL A 167 SHEET 1 AA2 5 VAL A 5 ASP A 6 0 SHEET 2 AA2 5 HIS A 163 PHE A 172 -1 O TYR A 170 N VAL A 5 SHEET 3 AA2 5 LYS A 181 LYS A 186 -1 O LYS A 186 N LEU A 166 SHEET 4 AA2 5 TYR A 198 ALA A 202 -1 O MET A 201 N TRP A 183 SHEET 5 AA2 5 ILE A 150 TYR A 151 1 N TYR A 151 O LYS A 200 SHEET 1 AA3 2 LEU A 83 ASP A 84 0 SHEET 2 AA3 2 SER A 105 ALA A 107 -1 O VAL A 106 N LEU A 83 SHEET 1 AA4 2 PHE A 112 ASP A 114 0 SHEET 2 AA4 2 SER A 216 PRO A 218 -1 O TYR A 217 N VAL A 113 SHEET 1 AA5 3 VAL B 5 ASP B 6 0 SHEET 2 AA5 3 HIS B 163 GLY B 171 -1 O TYR B 170 N VAL B 5 SHEET 3 AA5 3 ILE B 132 ILE B 136 -1 N ILE B 132 O VAL B 167 SHEET 1 AA6 5 VAL B 5 ASP B 6 0 SHEET 2 AA6 5 HIS B 163 GLY B 171 -1 O TYR B 170 N VAL B 5 SHEET 3 AA6 5 TYR B 182 LYS B 186 -1 O LYS B 186 N LEU B 166 SHEET 4 AA6 5 TYR B 198 ALA B 202 -1 O MET B 201 N TRP B 183 SHEET 5 AA6 5 ILE B 150 TYR B 151 1 N TYR B 151 O LYS B 200 SHEET 1 AA7 2 LEU B 83 ASP B 84 0 SHEET 2 AA7 2 SER B 105 ALA B 107 -1 O VAL B 106 N LEU B 83 SHEET 1 AA8 2 PHE B 112 ASP B 114 0 SHEET 2 AA8 2 SER B 216 PRO B 218 -1 O TYR B 217 N VAL B 113 SHEET 1 AA9 3 VAL C 5 ASP C 6 0 SHEET 2 AA9 3 HIS C 163 GLY C 171 -1 O TYR C 170 N VAL C 5 SHEET 3 AA9 3 ILE C 132 ILE C 136 -1 N ILE C 132 O VAL C 167 SHEET 1 AB1 5 VAL C 5 ASP C 6 0 SHEET 2 AB1 5 HIS C 163 GLY C 171 -1 O TYR C 170 N VAL C 5 SHEET 3 AB1 5 TYR C 182 LYS C 186 -1 O LYS C 186 N LEU C 166 SHEET 4 AB1 5 TYR C 198 ALA C 202 -1 O MET C 201 N TRP C 183 SHEET 5 AB1 5 ILE C 150 TYR C 151 1 N TYR C 151 O LYS C 200 SHEET 1 AB2 2 LEU C 83 ASP C 84 0 SHEET 2 AB2 2 SER C 105 ALA C 107 -1 O VAL C 106 N LEU C 83 SHEET 1 AB3 2 PHE C 112 ASP C 114 0 SHEET 2 AB3 2 SER C 216 PRO C 218 -1 O TYR C 217 N VAL C 113 SHEET 1 AB4 3 VAL D 5 ASP D 6 0 SHEET 2 AB4 3 HIS D 163 PHE D 172 -1 O TYR D 170 N VAL D 5 SHEET 3 AB4 3 ILE D 132 ILE D 136 -1 N VAL D 134 O VAL D 165 SHEET 1 AB5 5 VAL D 5 ASP D 6 0 SHEET 2 AB5 5 HIS D 163 PHE D 172 -1 O TYR D 170 N VAL D 5 SHEET 3 AB5 5 LYS D 181 LYS D 186 -1 O LYS D 186 N LEU D 166 SHEET 4 AB5 5 TYR D 198 ALA D 202 -1 O MET D 201 N TRP D 183 SHEET 5 AB5 5 ILE D 150 TYR D 151 1 N TYR D 151 O LYS D 200 SHEET 1 AB6 2 LEU D 83 ASP D 84 0 SHEET 2 AB6 2 SER D 105 ALA D 107 -1 O VAL D 106 N LEU D 83 SHEET 1 AB7 2 PHE D 112 ASP D 114 0 SHEET 2 AB7 2 SER D 216 PRO D 218 -1 O TYR D 217 N VAL D 113 SSBOND 1 CYS A 22 CYS A 65 1555 1555 2.02 SSBOND 2 CYS A 56 CYS A 98 1555 1555 2.03 SSBOND 3 CYS A 156 CYS A 209 1555 1555 2.04 SSBOND 4 CYS B 22 CYS B 65 1555 1555 2.02 SSBOND 5 CYS B 56 CYS B 98 1555 1555 2.01 SSBOND 6 CYS B 156 CYS B 209 1555 1555 2.03 SSBOND 7 CYS C 22 CYS C 65 1555 1555 2.08 SSBOND 8 CYS C 56 CYS C 98 1555 1555 2.03 SSBOND 9 CYS C 156 CYS C 209 1555 1555 2.07 SSBOND 10 CYS D 22 CYS D 65 1555 1555 2.03 SSBOND 11 CYS D 56 CYS D 98 1555 1555 2.06 SSBOND 12 CYS D 156 CYS D 209 1555 1555 2.01 LINK SG CYS A 25 C2 E64 A 301 1555 1555 1.84 LINK SG CYS B 25 C2 E64 B 301 1555 1555 1.91 LINK SG CYS C 25 C2 E64 C 301 1555 1555 1.82 LINK SG CYS D 25 C2 E64 D 301 1555 1555 1.91 CRYST1 57.350 62.750 68.350 105.63 93.32 115.45 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017437 0.008300 0.003935 0.00000 SCALE2 0.000000 0.017649 0.006094 0.00000 SCALE3 0.000000 0.000000 0.015504 0.00000