HEADER MEMBRANE PROTEIN 22-JUN-22 8A8C TITLE T5 PHAGE RECEPTOR-BINDING PROTEIN PB5 BOUND TO FERRICHROME TRANSPORTER TITLE 2 FHUA COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERRICHROME OUTER MEMBRANE TRANSPORTER/PHAGE RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FERRIC HYDROXAMATE RECEPTOR,FERRIC HYDROXAMATE UPTAKE, COMPND 5 FERRICHROME-IRON RECEPTOR; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RECEPTOR-BINDING PROTEIN PB5; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: RBP-PB5,TAIL PROTEIN PB5; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: FHUA, TONA, B0150, JW0146; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: ESCHERICHIA PHAGE T5; SOURCE 10 ORGANISM_TAXID: 2695836; SOURCE 11 GENE: OAD, T5.157, T5P153; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BACTERIOPHAGE, RECEPTOR, TONB-DEPENDENT TRANSPORTER, OUTER MEMBRANE, KEYWDS 2 MEMBRANE PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR A.SILALE,B.VAN DEN BERG REVDAT 4 16-NOV-22 8A8C 1 JRNL REVDAT 3 09-NOV-22 8A8C 1 JRNL REVDAT 2 02-NOV-22 8A8C 1 JRNL REVDAT 1 05-OCT-22 8A8C 0 JRNL AUTH B.VAN DEN BERG,A.SILALE,A.BASLE,A.F.BRANDNER,S.L.MADER, JRNL AUTH 2 S.KHALID JRNL TITL STRUCTURAL BASIS FOR HOST RECOGNITION AND SUPERINFECTION JRNL TITL 2 EXCLUSION BY BACTERIOPHAGE T5. JRNL REF PROC.NATL.ACAD.SCI.USA V. 119 72119 2022 JRNL REFN ESSN 1091-6490 JRNL PMID 36215462 JRNL DOI 10.1073/PNAS.2211672119 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : EPU, CRYOSPARC, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.100 REMARK 3 NUMBER OF PARTICLES : 71476 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8A8C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-JUL-22. REMARK 100 THE DEPOSITION ID IS D_1292123688. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : T5 PHAGE RECEPTOR-BINDING REMARK 245 PROTEIN PB5 BOUND TO REMARK 245 FERRICHROME TRANSPORTER FHUA REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 8.00 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 8387 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 165000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 VAL A 2 REMARK 465 GLU A 3 REMARK 465 PRO A 4 REMARK 465 LYS A 5 REMARK 465 GLU A 6 REMARK 465 ASP A 7 REMARK 465 THR A 8 REMARK 465 ILE A 9 REMARK 465 THR A 10 REMARK 465 VAL A 11 REMARK 465 THR A 12 REMARK 465 ALA A 13 REMARK 465 ALA A 14 REMARK 465 PRO A 15 REMARK 465 ALA A 16 REMARK 465 PRO A 17 REMARK 465 GLN A 18 REMARK 465 GLU A 19 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 PHE B 3 REMARK 465 PHE B 4 REMARK 465 ALA B 5 REMARK 465 GLY B 6 REMARK 465 LYS B 7 REMARK 465 LEU B 8 REMARK 465 ASN B 9 REMARK 465 ASN B 10 REMARK 465 LYS B 11 REMARK 465 SER B 12 REMARK 465 ILE B 13 REMARK 465 LEU B 14 REMARK 465 SER B 15 REMARK 465 LEU B 16 REMARK 465 ARG B 17 REMARK 465 ARG B 18 REMARK 465 GLY B 19 REMARK 465 SER B 20 REMARK 465 GLY B 21 REMARK 465 GLY B 22 REMARK 465 ASP B 23 REMARK 465 THR B 24 REMARK 465 ASN B 25 REMARK 465 GLN B 26 REMARK 465 HIS B 27 REMARK 465 ILE B 28 REMARK 465 ASN B 29 REMARK 465 PRO B 30 REMARK 465 ASP B 31 REMARK 465 SER B 32 REMARK 465 GLN B 33 REMARK 465 THR B 34 REMARK 465 ILE B 35 REMARK 465 PHE B 36 REMARK 465 HIS B 37 REMARK 465 SER B 38 REMARK 465 ASP B 39 REMARK 465 MET B 40 REMARK 465 GLY B 329 REMARK 465 GLY B 330 REMARK 465 LEU B 331 REMARK 465 PHE B 332 REMARK 465 ASN B 333 REMARK 465 GLY B 334 REMARK 465 ASN B 335 REMARK 465 ASP B 336 REMARK 465 ILE B 337 REMARK 465 LYS B 338 REMARK 465 LEU B 339 REMARK 465 SER B 340 REMARK 465 PRO B 341 REMARK 465 ARG B 342 REMARK 465 GLU B 343 REMARK 465 PHE B 344 REMARK 465 ILE B 345 REMARK 465 ILE B 346 REMARK 465 LYS B 347 REMARK 465 GLY B 348 REMARK 465 VAL B 349 REMARK 465 ASN B 350 REMARK 465 VAL B 351 REMARK 465 ASN B 352 REMARK 465 ASN B 353 REMARK 465 THR B 354 REMARK 465 ILE B 362 REMARK 465 GLU B 363 REMARK 465 LYS B 364 REMARK 465 ASN B 365 REMARK 465 PHE B 366 REMARK 465 ASN B 367 REMARK 465 VAL B 368 REMARK 465 GLY B 369 REMARK 465 ASN B 370 REMARK 465 ARG B 371 REMARK 465 ALA B 372 REMARK 465 ASP B 373 REMARK 465 LEU B 428 REMARK 465 PRO B 429 REMARK 465 SER B 430 REMARK 465 ALA B 431 REMARK 465 SER B 432 REMARK 465 TRP B 433 REMARK 465 TYR B 434 REMARK 465 VAL B 435 REMARK 465 SER B 436 REMARK 465 SER B 437 REMARK 465 ASN B 438 REMARK 465 PRO B 439 REMARK 465 PRO B 440 REMARK 465 LYS B 441 REMARK 465 ILE B 442 REMARK 465 GLY B 443 REMARK 465 ASN B 444 REMARK 465 ASN B 445 REMARK 465 TYR B 446 REMARK 465 GLY B 447 REMARK 465 ASP B 448 REMARK 465 VAL B 449 REMARK 465 TRP B 450 REMARK 465 SER B 451 REMARK 465 GLU B 452 REMARK 465 ASN B 453 REMARK 465 LEU B 454 REMARK 465 LEU B 455 REMARK 465 ASP B 488 REMARK 465 LEU B 489 REMARK 465 ASN B 490 REMARK 465 SER B 491 REMARK 465 SER B 492 REMARK 465 ARG B 493 REMARK 465 HIS B 642 REMARK 465 HIS B 643 REMARK 465 HIS B 644 REMARK 465 HIS B 645 REMARK 465 HIS B 646 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 386 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 38 8.70 58.95 REMARK 500 PRO A 47 42.40 -84.94 REMARK 500 TYR A 72 34.06 -99.37 REMARK 500 LEU A 106 -70.92 -95.15 REMARK 500 ASN A 107 61.24 -105.57 REMARK 500 GLN A 112 98.62 -69.08 REMARK 500 PHE A 115 -132.32 61.16 REMARK 500 ASP A 265 35.88 -99.67 REMARK 500 TYR A 325 -63.44 -95.89 REMARK 500 SER A 326 70.15 44.33 REMARK 500 ASP A 443 -97.57 53.27 REMARK 500 ARG A 713 59.16 -90.85 REMARK 500 GLN B 158 97.96 -69.69 REMARK 500 TRP B 187 148.53 -176.69 REMARK 500 SER B 188 -37.86 -130.50 REMARK 500 SER B 403 48.65 -82.30 REMARK 500 ASN B 404 15.11 -144.09 REMARK 500 ASN B 405 60.78 60.48 REMARK 500 ILE B 514 97.75 60.60 REMARK 500 ASN B 518 84.61 -173.55 REMARK 500 PRO B 519 51.91 -66.28 REMARK 500 GLN B 525 32.08 -97.36 REMARK 500 ARG B 535 60.54 60.25 REMARK 500 PHE B 560 115.78 -162.86 REMARK 500 LYS B 571 -71.08 55.51 REMARK 500 GLN B 573 52.40 -91.40 REMARK 500 PRO B 630 43.78 -83.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-15229 RELATED DB: EMDB REMARK 900 T5 PHAGE RECEPTOR-BINDING PROTEIN PB5 BOUND TO FERRICHROME REMARK 900 TRANSPORTER FHUA DBREF 8A8C A 1 714 UNP P06971 FHUA_ECOLI 34 747 DBREF 8A8C B 1 640 UNP P23207 RBP5_BPT5 1 640 SEQADV 8A8C HIS B 641 UNP P23207 EXPRESSION TAG SEQADV 8A8C HIS B 642 UNP P23207 EXPRESSION TAG SEQADV 8A8C HIS B 643 UNP P23207 EXPRESSION TAG SEQADV 8A8C HIS B 644 UNP P23207 EXPRESSION TAG SEQADV 8A8C HIS B 645 UNP P23207 EXPRESSION TAG SEQADV 8A8C HIS B 646 UNP P23207 EXPRESSION TAG SEQRES 1 A 714 ALA VAL GLU PRO LYS GLU ASP THR ILE THR VAL THR ALA SEQRES 2 A 714 ALA PRO ALA PRO GLN GLU SER ALA TRP GLY PRO ALA ALA SEQRES 3 A 714 THR ILE ALA ALA ARG GLN SER ALA THR GLY THR LYS THR SEQRES 4 A 714 ASP THR PRO ILE GLN LYS VAL PRO GLN SER ILE SER VAL SEQRES 5 A 714 VAL THR ALA GLU GLU MET ALA LEU HIS GLN PRO LYS SER SEQRES 6 A 714 VAL LYS GLU ALA LEU SER TYR THR PRO GLY VAL SER VAL SEQRES 7 A 714 GLY THR ARG GLY ALA SER ASN THR TYR ASP HIS LEU ILE SEQRES 8 A 714 ILE ARG GLY PHE ALA ALA GLU GLY GLN SER GLN ASN ASN SEQRES 9 A 714 TYR LEU ASN GLY LEU LYS LEU GLN GLY ASN PHE TYR ASN SEQRES 10 A 714 ASP ALA VAL ILE ASP PRO TYR MET LEU GLU ARG ALA GLU SEQRES 11 A 714 ILE MET ARG GLY PRO VAL SER VAL LEU TYR GLY LYS SER SEQRES 12 A 714 SER PRO GLY GLY LEU LEU ASN MET VAL SER LYS ARG PRO SEQRES 13 A 714 THR THR GLU PRO LEU LYS GLU VAL GLN PHE LYS ALA GLY SEQRES 14 A 714 THR ASP SER LEU PHE GLN THR GLY PHE ASP PHE SER ASP SEQRES 15 A 714 SER LEU ASP ASP ASP GLY VAL TYR SER TYR ARG LEU THR SEQRES 16 A 714 GLY LEU ALA ARG SER ALA ASN ALA GLN GLN LYS GLY SER SEQRES 17 A 714 GLU GLU GLN ARG TYR ALA ILE ALA PRO ALA PHE THR TRP SEQRES 18 A 714 ARG PRO ASP ASP LYS THR ASN PHE THR PHE LEU SER TYR SEQRES 19 A 714 PHE GLN ASN GLU PRO GLU THR GLY TYR TYR GLY TRP LEU SEQRES 20 A 714 PRO LYS GLU GLY THR VAL GLU PRO LEU PRO ASN GLY LYS SEQRES 21 A 714 ARG LEU PRO THR ASP PHE ASN GLU GLY ALA LYS ASN ASN SEQRES 22 A 714 THR TYR SER ARG ASN GLU LYS MET VAL GLY TYR SER PHE SEQRES 23 A 714 ASP HIS GLU PHE ASN ASP THR PHE THR VAL ARG GLN ASN SEQRES 24 A 714 LEU ARG PHE ALA GLU ASN LYS THR SER GLN ASN SER VAL SEQRES 25 A 714 TYR GLY TYR GLY VAL CYS SER ASP PRO ALA ASN ALA TYR SEQRES 26 A 714 SER LYS GLN CYS ALA ALA LEU ALA PRO ALA ASP LYS GLY SEQRES 27 A 714 HIS TYR LEU ALA ARG LYS TYR VAL VAL ASP ASP GLU LYS SEQRES 28 A 714 LEU GLN ASN PHE SER VAL ASP THR GLN LEU GLN SER LYS SEQRES 29 A 714 PHE ALA THR GLY ASP ILE ASP HIS THR LEU LEU THR GLY SEQRES 30 A 714 VAL ASP PHE MET ARG MET ARG ASN ASP ILE ASN ALA TRP SEQRES 31 A 714 PHE GLY TYR ASP ASP SER VAL PRO LEU LEU ASN LEU TYR SEQRES 32 A 714 ASN PRO VAL ASN THR ASP PHE ASP PHE ASN ALA LYS ASP SEQRES 33 A 714 PRO ALA ASN SER GLY PRO TYR ARG ILE LEU ASN LYS GLN SEQRES 34 A 714 LYS GLN THR GLY VAL TYR VAL GLN ASP GLN ALA GLN TRP SEQRES 35 A 714 ASP LYS VAL LEU VAL THR LEU GLY GLY ARG TYR ASP TRP SEQRES 36 A 714 ALA ASP GLN GLU SER LEU ASN ARG VAL ALA GLY THR THR SEQRES 37 A 714 ASP LYS ARG ASP ASP LYS GLN PHE THR TRP ARG GLY GLY SEQRES 38 A 714 VAL ASN TYR LEU PHE ASP ASN GLY VAL THR PRO TYR PHE SEQRES 39 A 714 SER TYR SER GLU SER PHE GLU PRO SER SER GLN VAL GLY SEQRES 40 A 714 LYS ASP GLY ASN ILE PHE ALA PRO SER LYS GLY LYS GLN SEQRES 41 A 714 TYR GLU VAL GLY VAL LYS TYR VAL PRO GLU ASP ARG PRO SEQRES 42 A 714 ILE VAL VAL THR GLY ALA VAL TYR ASN LEU THR LYS THR SEQRES 43 A 714 ASN ASN LEU MET ALA ASP PRO GLU GLY SER PHE PHE SER SEQRES 44 A 714 VAL GLU GLY GLY GLU ILE ARG ALA ARG GLY VAL GLU ILE SEQRES 45 A 714 GLU ALA LYS ALA ALA LEU SER ALA SER VAL ASN VAL VAL SEQRES 46 A 714 GLY SER TYR THR TYR THR ASP ALA GLU TYR THR THR ASP SEQRES 47 A 714 THR THR TYR LYS GLY ASN THR PRO ALA GLN VAL PRO LYS SEQRES 48 A 714 HIS MET ALA SER LEU TRP ALA ASP TYR THR PHE PHE ASP SEQRES 49 A 714 GLY PRO LEU SER GLY LEU THR LEU GLY THR GLY GLY ARG SEQRES 50 A 714 TYR THR GLY SER SER TYR GLY ASP PRO ALA ASN SER PHE SEQRES 51 A 714 LYS VAL GLY SER TYR THR VAL VAL ASP ALA LEU VAL ARG SEQRES 52 A 714 TYR ASP LEU ALA ARG VAL GLY MET ALA GLY SER ASN VAL SEQRES 53 A 714 ALA LEU HIS VAL ASN ASN LEU PHE ASP ARG GLU TYR VAL SEQRES 54 A 714 ALA SER CYS PHE ASN THR TYR GLY CYS PHE TRP GLY ALA SEQRES 55 A 714 GLU ARG GLN VAL VAL ALA THR ALA THR PHE ARG PHE SEQRES 1 B 646 MET SER PHE PHE ALA GLY LYS LEU ASN ASN LYS SER ILE SEQRES 2 B 646 LEU SER LEU ARG ARG GLY SER GLY GLY ASP THR ASN GLN SEQRES 3 B 646 HIS ILE ASN PRO ASP SER GLN THR ILE PHE HIS SER ASP SEQRES 4 B 646 MET SER HIS VAL ILE ILE THR GLU THR HIS SER THR GLY SEQRES 5 B 646 LEU ARG LEU ASP GLN GLY ALA GLY ASP TYR TYR TRP SER SEQRES 6 B 646 GLU MET PRO SER ARG VAL THR GLN LEU HIS ASN ASN ASP SEQRES 7 B 646 PRO ASN ARG VAL VAL LEU THR GLU ILE GLU PHE SER ASP SEQRES 8 B 646 GLY SER ARG HIS MET LEU SER GLY MET SER MET GLY VAL SEQRES 9 B 646 GLY ALA LYS ALA TYR GLY ILE ILE ASN PRO GLN ILE MET SEQRES 10 B 646 SER GLN GLY GLY LEU LYS THR GLN ILE THR ALA SER ALA SEQRES 11 B 646 ASP LEU SER LEU ASP VAL GLY TYR PHE ASN THR GLY THR SEQRES 12 B 646 SER GLY THR ILE PRO GLN LYS LEU ARG ASP GLY THR GLY SEQRES 13 B 646 CYS GLN HIS MET PHE GLY ALA PHE SER GLY ARG ARG GLY SEQRES 14 B 646 PHE ALA SER SER ALA MET TYR LEU GLY GLY ALA ALA LEU SEQRES 15 B 646 TYR LYS SER ALA TRP SER GLY SER GLY TYR VAL VAL ALA SEQRES 16 B 646 ASP ALA GLY THR LEU THR ILE PRO SER ASP TYR VAL ARG SEQRES 17 B 646 HIS PRO GLY ALA ARG ASN PHE GLY PHE ASN ALA ILE TYR SEQRES 18 B 646 VAL ARG GLY ARG SER CYS ASN ARG VAL LEU TYR GLY MET SEQRES 19 B 646 GLU GLY PRO ASN TYR THR THR GLY GLY ALA VAL GLN GLY SEQRES 20 B 646 ALA SER SER SER GLY ALA LEU ASN PHE THR TYR ASN PRO SEQRES 21 B 646 SER ASN PRO GLU SER PRO LYS TYR SER VAL GLY PHE ALA SEQRES 22 B 646 ARG ALA ASP PRO THR ASN TYR ALA TYR TRP GLU SER MET SEQRES 23 B 646 GLY ASP PRO ASN ASP SER ALA ASN GLY PRO ILE GLY ILE SEQRES 24 B 646 TYR SER GLU HIS LEU GLY ILE TYR PRO SER LYS ILE THR SEQRES 25 B 646 TRP TYR VAL THR ASN LEU VAL TYR ASN GLY SER GLY TYR SEQRES 26 B 646 ASN ILE ASP GLY GLY LEU PHE ASN GLY ASN ASP ILE LYS SEQRES 27 B 646 LEU SER PRO ARG GLU PHE ILE ILE LYS GLY VAL ASN VAL SEQRES 28 B 646 ASN ASN THR SER TRP LYS PHE ILE ASN PHE ILE GLU LYS SEQRES 29 B 646 ASN PHE ASN VAL GLY ASN ARG ALA ASP PHE ARG ASP VAL SEQRES 30 B 646 GLY CYS ASN LEU SER LYS ASP SER PRO SER THR GLY ILE SEQRES 31 B 646 SER GLY ILE ALA THR PHE GLY LEU PRO THR THR GLU SER SEQRES 32 B 646 ASN ASN ALA PRO SER ILE LYS GLY GLY ASN VAL GLY GLY SEQRES 33 B 646 LEU HIS ALA ASN VAL VAL SER ILE TYR ASN PHE LEU PRO SEQRES 34 B 646 SER ALA SER TRP TYR VAL SER SER ASN PRO PRO LYS ILE SEQRES 35 B 646 GLY ASN ASN TYR GLY ASP VAL TRP SER GLU ASN LEU LEU SEQRES 36 B 646 PRO LEU ARG LEU LEU GLY GLY SER GLY SER THR ILE LEU SEQRES 37 B 646 SER GLY ASN ILE VAL PHE GLN GLY ASN GLY SER VAL HIS SEQRES 38 B 646 VAL GLY THR VAL GLY LEU ASP LEU ASN SER SER ARG ASN SEQRES 39 B 646 GLY ALA ILE VAL CYS THR MET GLU PHE ILE ASP ASP THR SEQRES 40 B 646 TRP LEU SER ALA GLY GLY ILE GLY CYS PHE ASN PRO THR SEQRES 41 B 646 GLU MET LEU SER GLN GLY ALA GLU TYR GLY ASP SER ARG SEQRES 42 B 646 PHE ARG ILE GLY GLY ASN THR ILE ASN LYS LYS LEU HIS SEQRES 43 B 646 GLN ILE LEU SER LEU PRO ALA GLY GLU TYR VAL PRO PHE SEQRES 44 B 646 PHE THR ILE LYS GLY THR VAL VAL ASN ALA CYS LYS LEU SEQRES 45 B 646 GLN ALA ALA ALA TYR ASN PRO THR PRO TYR TRP VAL SER SEQRES 46 B 646 GLY LEU PRO GLY SER VAL GLY GLN THR GLY TYR TYR THR SEQRES 47 B 646 LEU THR TYR TYR MET ARG ASN ASP GLY ASN ASN ASN ILE SEQRES 48 B 646 SER ILE TRP LEU ASP SER SER MET SER ASN ILE ILE GLY SEQRES 49 B 646 MET LYS ALA CYS LEU PRO ASN ILE LYS LEU ILE ILE GLN SEQRES 50 B 646 ARG LEU THR HIS HIS HIS HIS HIS HIS HET LU9 A 801 136 HETNAM LU9 [(2R,3S,4R,5R,6R)-2-[[(2R,4R,5R,6R)-6-[(1R)-1,2- HETNAM 2 LU9 BIS(OXIDANYL)ETHYL]-4-[(2R,4R,5R,6R)-6-[(1R)-1,2- HETNAM 3 LU9 BIS(OXIDANYL)ETHYL]-2-CARBOXY-4,5-BIS(OXIDANYL)OXAN-2- HETNAM 4 LU9 YL]OXY-2-CARBOXY-5-OXIDANYL-OXAN-2-YL]OXYMETHYL]-5- HETNAM 5 LU9 [[(3R)-3-DODECANOYLOXYTETRADECANOYL]AMINO]-4-(3- HETNAM 6 LU9 NONANOYLOXYPROPANOYLOXY)-6-[[(2R,3S,4R,5R,6R)-3- HETNAM 7 LU9 OXIDANYL-4-[(3S)-3-OXIDANYLTETRADECANOYL]OXY-5-[[(3R)- HETNAM 8 LU9 3-OXIDANYLTRIDECANOYL]AMINO]-6-PHOSPHONATOOXY-OXAN-2- HETNAM 9 LU9 YL]METHOXY]OXAN-3-YL] PHOSPHATE HETSYN LU9 LIPOPOLYSACCHARIDE FORMUL 3 LU9 C93 H164 N2 O39 P2 4- HELIX 1 AA1 TRP A 22 THR A 27 1 6 HELIX 2 AA2 GLN A 44 VAL A 46 5 3 HELIX 3 AA3 ALA A 55 GLN A 62 1 8 HELIX 4 AA4 SER A 65 LEU A 70 1 6 HELIX 5 AA5 SER A 71 THR A 73 5 3 HELIX 6 AA6 ASP A 122 TYR A 124 5 3 HELIX 7 AA7 VAL A 136 GLY A 141 1 6 HELIX 8 AA8 SER A 326 ALA A 331 1 6 HELIX 9 AA9 PRO B 68 ASN B 77 1 10 HELIX 10 AB1 THR B 146 LEU B 151 1 6 HELIX 11 AB2 ARG B 152 GLY B 154 5 3 HELIX 12 AB3 SER B 173 MET B 175 5 3 HELIX 13 AB4 TYR B 176 TYR B 183 1 8 HELIX 14 AB5 ASP B 205 VAL B 207 5 3 HELIX 15 AB6 ASP B 291 GLY B 295 5 5 HELIX 16 AB7 THR B 507 ALA B 511 5 5 HELIX 17 AB8 LEU B 587 VAL B 591 5 5 SHEET 1 AA1 2 GLN A 32 SER A 33 0 SHEET 2 AA1 2 THR A 41 PRO A 42 -1 O THR A 41 N SER A 33 SHEET 1 AA2 4 ILE A 50 THR A 54 0 SHEET 2 AA2 4 LEU A 126 ARG A 133 -1 O ILE A 131 N SER A 51 SHEET 3 AA2 4 GLY A 147 SER A 153 -1 O ASN A 150 N GLU A 130 SHEET 4 AA2 4 ASN A 104 TYR A 105 1 N TYR A 105 O LEU A 149 SHEET 1 AA3 2 VAL A 76 SER A 77 0 SHEET 2 AA3 2 ILE A 91 ILE A 92 -1 O ILE A 91 N SER A 77 SHEET 1 AA412 LEU A 400 ASN A 401 0 SHEET 2 AA412 TYR A 340 THR A 367 -1 N LEU A 341 O LEU A 400 SHEET 3 AA412 PHE A 294 VAL A 317 -1 N ASN A 305 O LEU A 352 SHEET 4 AA412 THR A 274 ASN A 291 -1 N PHE A 286 O GLN A 298 SHEET 5 AA412 THR A 227 GLU A 238 -1 N GLU A 238 O ARG A 277 SHEET 6 AA412 GLU A 209 TRP A 221 -1 N PHE A 219 O PHE A 231 SHEET 7 AA412 TYR A 190 ASN A 202 -1 N ALA A 201 O GLU A 210 SHEET 8 AA412 LEU A 173 SER A 183 -1 N PHE A 178 O GLY A 196 SHEET 9 AA412 LEU A 161 GLY A 169 -1 N LYS A 167 O GLN A 175 SHEET 10 AA412 GLN A 705 PHE A 712 -1 O PHE A 712 N VAL A 164 SHEET 11 AA412 ASN A 675 ASN A 681 -1 N ALA A 677 O THR A 709 SHEET 12 AA412 TYR A 664 ASP A 665 -1 N TYR A 664 O VAL A 676 SHEET 1 AA516 LEU A 400 ASN A 401 0 SHEET 2 AA516 TYR A 340 THR A 367 -1 N LEU A 341 O LEU A 400 SHEET 3 AA516 ILE A 370 GLY A 392 -1 O ARG A 382 N PHE A 355 SHEET 4 AA516 SER A 420 TRP A 442 -1 O TYR A 423 N ALA A 389 SHEET 5 AA516 VAL A 445 ASN A 462 -1 O ASP A 457 N LYS A 430 SHEET 6 AA516 THR A 468 TYR A 484 -1 O ASP A 473 N ALA A 456 SHEET 7 AA516 VAL A 490 SER A 499 -1 O PHE A 494 N VAL A 482 SHEET 8 AA516 GLY A 518 TYR A 527 -1 O GLY A 524 N TYR A 493 SHEET 9 AA516 VAL A 536 ALA A 551 -1 O VAL A 540 N VAL A 523 SHEET 10 AA516 SER A 559 ALA A 576 -1 O ALA A 567 N LEU A 543 SHEET 11 AA516 ASN A 583 THR A 597 -1 O GLY A 586 N ALA A 574 SHEET 12 AA516 HIS A 612 THR A 621 -1 O MET A 613 N THR A 589 SHEET 13 AA516 THR A 631 THR A 639 -1 O TYR A 638 N ALA A 614 SHEET 14 AA516 TYR A 655 LEU A 661 -1 O ASP A 659 N GLY A 635 SHEET 15 AA516 ASN A 675 ASN A 681 -1 O VAL A 680 N ALA A 660 SHEET 16 AA516 TYR A 664 ASP A 665 -1 N TYR A 664 O VAL A 676 SHEET 1 AA6 2 SER A 642 TYR A 643 0 SHEET 2 AA6 2 LYS A 651 VAL A 652 -1 O VAL A 652 N SER A 642 SHEET 1 AA7 2 VAL A 689 CYS A 692 0 SHEET 2 AA7 2 CYS A 698 TRP A 700 -1 O PHE A 699 N ALA A 690 SHEET 1 AA8 9 TYR B 325 ILE B 327 0 SHEET 2 AA8 9 PRO B 308 TYR B 320 -1 N VAL B 319 O ASN B 326 SHEET 3 AA8 9 ARG B 81 PHE B 89 -1 N GLU B 88 O LYS B 310 SHEET 4 AA8 9 ARG B 94 MET B 96 -1 O HIS B 95 N ILE B 87 SHEET 5 AA8 9 ARG B 375 SER B 382 1 O GLY B 378 N MET B 96 SHEET 6 AA8 9 HIS B 418 ASN B 426 -1 O ASN B 420 N CYS B 379 SHEET 7 AA8 9 LYS B 357 PHE B 361 -1 N ASN B 360 O SER B 423 SHEET 8 AA8 9 ILE B 44 GLY B 52 -1 N ILE B 45 O LYS B 357 SHEET 9 AA8 9 PRO B 308 TYR B 320 -1 O VAL B 315 N GLU B 47 SHEET 1 AA9 3 TYR B 63 GLU B 66 0 SHEET 2 AA9 3 ALA B 219 ARG B 223 -1 O VAL B 222 N TYR B 63 SHEET 3 AA9 3 ASP B 135 PHE B 139 -1 N GLY B 137 O TYR B 221 SHEET 1 AB1 7 ILE B 112 ASN B 113 0 SHEET 2 AB1 7 MET B 117 SER B 129 -1 O MET B 117 N ASN B 113 SHEET 3 AB1 7 MET B 100 GLY B 103 -1 N GLY B 103 O THR B 127 SHEET 4 AB1 7 TYR B 556 THR B 561 1 O PHE B 559 N MET B 100 SHEET 5 AB1 7 THR B 600 ASN B 605 -1 O MET B 603 N VAL B 557 SHEET 6 AB1 7 ILE B 611 SER B 617 -1 O TRP B 614 N TYR B 602 SHEET 7 AB1 7 GLY B 478 GLY B 483 -1 N GLY B 483 O ILE B 613 SHEET 1 AB2 7 SER B 251 TYR B 258 0 SHEET 2 AB2 7 LYS B 267 ALA B 275 -1 O ARG B 274 N SER B 251 SHEET 3 AB2 7 GLN B 158 ARG B 167 -1 N GLY B 162 O GLY B 271 SHEET 4 AB2 7 MET B 117 SER B 129 -1 N ILE B 126 O HIS B 159 SHEET 5 AB2 7 LYS B 107 TYR B 109 -1 N LYS B 107 O LYS B 123 SHEET 6 AB2 7 GLY B 564 ASN B 568 1 O VAL B 567 N ALA B 108 SHEET 7 AB2 7 GLN B 593 TYR B 597 -1 O GLY B 595 N VAL B 566 SHEET 1 AB3 2 ILE B 202 PRO B 203 0 SHEET 2 AB3 2 ILE B 536 GLY B 537 1 O GLY B 537 N ILE B 202 SHEET 1 AB4 2 ARG B 229 LEU B 231 0 SHEET 2 AB4 2 GLY B 298 TYR B 300 -1 O TYR B 300 N ARG B 229 SHEET 1 AB5 2 VAL B 245 GLN B 246 0 SHEET 2 AB5 2 TYR B 282 TRP B 283 -1 O TYR B 282 N GLN B 246 SHEET 1 AB6 4 LEU B 459 LEU B 468 0 SHEET 2 AB6 4 ILE B 632 LEU B 639 -1 O ILE B 636 N GLY B 464 SHEET 3 AB6 4 ALA B 496 PHE B 503 -1 N GLU B 502 O LYS B 633 SHEET 4 AB6 4 HIS B 546 SER B 550 -1 O GLN B 547 N CYS B 499 SHEET 1 AB7 2 ASN B 471 PHE B 474 0 SHEET 2 AB7 2 MET B 625 CYS B 628 -1 O MET B 625 N PHE B 474 SSBOND 1 CYS A 318 CYS A 329 1555 1555 2.03 SSBOND 2 CYS A 692 CYS A 698 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000