HEADER OXIDOREDUCTASE 24-JUN-22 8A8T
TITLE MALONYL-COA REDUCTASE FROM CHLOROFLEXUS AURANTIACUS - C-TERMINAL NADP
TITLE 2 AND MALONATE BOUND
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR;
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: CHLOROFLEXUS AURANTIACUS J-10-FL;
SOURCE 3 ORGANISM_TAXID: 324602;
SOURCE 4 GENE: CAUR_2614;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS MALONYL-COA, CHLOROFLEXUS AURANTIACUS, REDUCTASE, 3-
KEYWDS 2 HYDROXYPROPIONATE, 3-HP CYCLE, BI-FUNCTIONAL ENZYME, CARBON
KEYWDS 3 FIXATION, OXIDOREDUCTASE
EXPDTA X-RAY DIFFRACTION
AUTHOR B.V.KABASAKAL,J.W.MURRAY
REVDAT 4 07-FEB-24 8A8T 1 REMARK
REVDAT 3 06-DEC-23 8A8T 1 JRNL
REVDAT 2 22-NOV-23 8A8T 1 JRNL
REVDAT 1 05-APR-23 8A8T 0
JRNL AUTH B.V.KABASAKAL,C.A.R.COTTON,J.W.MURRAY
JRNL TITL DYNAMIC LID DOMAIN OF CHLOROFLEXUS AURANTIACUS MALONYL-COA
JRNL TITL 2 REDUCTASE CONTROLS THE REACTION.
JRNL REF BIOCHIMIE V. 219 12 2023
JRNL REFN ISSN 0300-9084
JRNL PMID 37952891
JRNL DOI 10.1016/J.BIOCHI.2023.11.003
REMARK 1
REMARK 1 REFERENCE 1
REMARK 1 AUTH B.V.KABASAKAL,C.A.R.COTTON,J.W.MURRAY
REMARK 1 TITL DYNAMIC LID DOMAIN OF CHLOROFLEXUS AURANTIACUS
REMARK 1 TITL 2 MALONYL-COA REDUCTASE CONTROLS THE REACTION
REMARK 1 REF BIORXIV 2023
REMARK 1 REFN ISSN 2692-8205
REMARK 1 DOI 10.1101/2023.03.21.533589
REMARK 2
REMARK 2 RESOLUTION. 2.11 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX (1.20.1_4487: ???)
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : ML
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.11
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 63.15
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.020
REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0
REMARK 3 NUMBER OF REFLECTIONS : 100168
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.183
REMARK 3 R VALUE (WORKING SET) : 0.182
REMARK 3 FREE R VALUE : 0.218
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960
REMARK 3 FREE R VALUE TEST SET COUNT : 4964
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 10.0000 - 6.5500 0.97 3163 146 0.1231 0.1741
REMARK 3 2 6.5500 - 5.2000 0.94 3045 166 0.1502 0.1743
REMARK 3 3 5.2000 - 4.5500 0.94 3004 170 0.1301 0.1637
REMARK 3 4 4.5400 - 4.1300 0.93 3025 170 0.1303 0.1542
REMARK 3 5 4.1300 - 3.8300 0.94 3000 154 0.1500 0.1681
REMARK 3 6 3.8300 - 3.6100 0.93 3026 159 0.1575 0.1903
REMARK 3 7 3.6100 - 3.4300 0.94 3085 145 0.1645 0.2185
REMARK 3 8 3.4300 - 3.2800 0.96 3123 151 0.1797 0.2259
REMARK 3 9 3.2800 - 3.1500 0.96 3081 145 0.2100 0.2466
REMARK 3 10 3.1500 - 3.0400 0.98 3182 177 0.2154 0.2912
REMARK 3 11 3.0400 - 2.9500 0.99 3254 146 0.2044 0.2505
REMARK 3 12 2.9500 - 2.8600 0.99 3162 146 0.2065 0.2426
REMARK 3 13 2.8600 - 2.7900 1.00 3246 180 0.1981 0.2301
REMARK 3 14 2.7900 - 2.7200 1.00 3233 184 0.1985 0.2527
REMARK 3 15 2.7200 - 2.6600 1.00 3240 150 0.2039 0.2099
REMARK 3 16 2.6600 - 2.6000 1.00 3220 164 0.2073 0.2116
REMARK 3 17 2.6000 - 2.5500 1.00 3267 177 0.2119 0.2796
REMARK 3 18 2.5500 - 2.5000 1.00 3154 215 0.2167 0.2744
REMARK 3 19 2.5000 - 2.4600 1.00 3194 159 0.2205 0.2740
REMARK 3 20 2.4600 - 2.4200 1.00 3227 177 0.2265 0.2379
REMARK 3 21 2.4200 - 2.3800 1.00 3230 174 0.2256 0.2325
REMARK 3 22 2.3800 - 2.3400 1.00 3233 188 0.2458 0.2977
REMARK 3 23 2.3400 - 2.3100 1.00 3166 178 0.2493 0.3104
REMARK 3 24 2.3100 - 2.2700 1.00 3238 187 0.2951 0.3244
REMARK 3 25 2.2700 - 2.2400 0.98 3142 167 0.4075 0.4562
REMARK 3 26 2.2400 - 2.2100 0.99 3304 174 0.3515 0.3515
REMARK 3 27 2.2100 - 2.1900 1.00 3071 154 0.3051 0.3188
REMARK 3 28 2.1900 - 2.1600 1.00 3378 148 0.3035 0.3190
REMARK 3 29 2.1600 - 2.1300 1.00 3219 188 0.3040 0.3656
REMARK 3 30 2.1300 - 2.1100 1.00 3292 125 0.3214 0.3561
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.620
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 42.78
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.007 5092
REMARK 3 ANGLE : 0.890 6926
REMARK 3 CHIRALITY : 0.049 789
REMARK 3 PLANARITY : 0.008 910
REMARK 3 DIHEDRAL : 15.596 1900
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 4
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 560 THROUGH 755 )
REMARK 3 ORIGIN FOR THE GROUP (A): -7.1661 5.1761 16.9324
REMARK 3 T TENSOR
REMARK 3 T11: 0.2846 T22: 0.3340
REMARK 3 T33: 0.2988 T12: 0.0289
REMARK 3 T13: 0.0092 T23: 0.0720
REMARK 3 L TENSOR
REMARK 3 L11: 1.5465 L22: 3.2054
REMARK 3 L33: 1.7576 L12: -0.6874
REMARK 3 L13: 0.0208 L23: 0.5067
REMARK 3 S TENSOR
REMARK 3 S11: -0.0631 S12: -0.1524 S13: -0.3583
REMARK 3 S21: 0.3466 S22: 0.0856 S23: 0.1567
REMARK 3 S31: 0.2697 S32: 0.0514 S33: -0.0211
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 756 THROUGH 937 )
REMARK 3 ORIGIN FOR THE GROUP (A): -30.6504 24.0042 9.6005
REMARK 3 T TENSOR
REMARK 3 T11: 0.3402 T22: 0.3972
REMARK 3 T33: 0.5438 T12: 0.0408
REMARK 3 T13: 0.0109 T23: 0.0223
REMARK 3 L TENSOR
REMARK 3 L11: 2.7226 L22: 3.1669
REMARK 3 L33: 0.4832 L12: -2.6926
REMARK 3 L13: -0.5764 L23: 0.8174
REMARK 3 S TENSOR
REMARK 3 S11: -0.1019 S12: 0.1192 S13: -0.5490
REMARK 3 S21: 0.0861 S22: -0.1625 S23: 0.8119
REMARK 3 S31: -0.0725 S32: -0.1936 S33: 0.2812
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 938 THROUGH 1154 )
REMARK 3 ORIGIN FOR THE GROUP (A): -4.4298 36.2463 18.4608
REMARK 3 T TENSOR
REMARK 3 T11: 0.3951 T22: 0.3312
REMARK 3 T33: 0.2468 T12: -0.0405
REMARK 3 T13: 0.0324 T23: 0.0371
REMARK 3 L TENSOR
REMARK 3 L11: 1.0889 L22: 2.7860
REMARK 3 L33: 1.8987 L12: -0.6511
REMARK 3 L13: -0.2877 L23: 1.1508
REMARK 3 S TENSOR
REMARK 3 S11: 0.0103 S12: -0.0237 S13: 0.1659
REMARK 3 S21: -0.0944 S22: 0.1015 S23: -0.1687
REMARK 3 S31: -0.5316 S32: 0.1411 S33: -0.0926
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1155 THROUGH 1201 )
REMARK 3 ORIGIN FOR THE GROUP (A): -0.5216 42.0923 9.9822
REMARK 3 T TENSOR
REMARK 3 T11: 0.7015 T22: 0.4775
REMARK 3 T33: 0.3446 T12: -0.0871
REMARK 3 T13: 0.1062 T23: 0.0666
REMARK 3 L TENSOR
REMARK 3 L11: 9.0809 L22: 8.3131
REMARK 3 L33: 6.1468 L12: 1.2457
REMARK 3 L13: -0.5514 L23: 0.4804
REMARK 3 S TENSOR
REMARK 3 S11: 0.1833 S12: 0.6340 S13: 0.2990
REMARK 3 S21: -0.5188 S22: -0.1312 S23: -0.9564
REMARK 3 S31: -0.6452 S32: 0.6499 S33: -0.0178
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 8A8T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-JUN-22.
REMARK 100 THE DEPOSITION ID IS D_1292123910.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 29-FEB-16
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.0
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : DIAMOND
REMARK 200 BEAMLINE : I04
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS
REMARK 200 DATA SCALING SOFTWARE : DIALS
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 100168
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.110
REMARK 200 RESOLUTION RANGE LOW (A) : 63.150
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2
REMARK 200 DATA REDUNDANCY : 1.900
REMARK 200 R MERGE (I) : 0.03785
REMARK 200 R SYM (I) : NULL
REMARK 200 FOR THE DATA SET : 11.1400
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.11
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.19
REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9
REMARK 200 DATA REDUNDANCY IN SHELL : 2.00
REMARK 200 R MERGE FOR SHELL (I) : 0.53480
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 FOR SHELL : 1.440
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: 8A30
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 60.62
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.12
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.8 M SUCCINIC ACID, PH 7.0, 0.5 MM
REMARK 280 NADPH CO-CRYSTALLISED, VAPOR DIFFUSION, HANGING DROP,
REMARK 280 TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y,-Z
REMARK 290 3555 X+1/2,Y+1/2,Z
REMARK 290 4555 -X+1/2,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 50.48000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 63.14500
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 50.48000
REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 63.14500
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 7470 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 47780 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 375
REMARK 375 SPECIAL POSITION
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL
REMARK 375 POSITIONS.
REMARK 375
REMARK 375 ATOM RES CSSEQI
REMARK 375 HOH A1535 LIES ON A SPECIAL POSITION.
REMARK 375 HOH A1666 LIES ON A SPECIAL POSITION.
REMARK 375 HOH A1677 LIES ON A SPECIAL POSITION.
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 SER A 550
REMARK 465 ALA A 551
REMARK 465 THR A 552
REMARK 465 THR A 553
REMARK 465 GLY A 554
REMARK 465 ALA A 555
REMARK 465 ARG A 556
REMARK 465 SER A 557
REMARK 465 ALA A 558
REMARK 465 SER A 559
REMARK 465 ALA A 1172
REMARK 465 GLU A 1173
REMARK 465 GLU A 1174
REMARK 465 GLU A 1202
REMARK 465 ALA A 1203
REMARK 465 ASP A 1204
REMARK 465 THR A 1205
REMARK 465 ARG A 1206
REMARK 465 TYR A 1207
REMARK 465 ALA A 1208
REMARK 465 GLY A 1209
REMARK 465 ARG A 1210
REMARK 465 ILE A 1211
REMARK 465 HIS A 1212
REMARK 465 ARG A 1213
REMARK 465 GLY A 1214
REMARK 465 ARG A 1215
REMARK 465 ALA A 1216
REMARK 465 ILE A 1217
REMARK 465 THR A 1218
REMARK 465 VAL A 1219
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 ARG A1158 CG CD NE CZ NH1 NH2
REMARK 470 ARG A1169 CG CD NE CZ NH1 NH2
REMARK 470 ARG A1176 CG CD NE CZ NH1 NH2
REMARK 470 ASP A1177 CG OD1 OD2
REMARK 470 HIS A1179 CG ND1 CD2 CE1 NE2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ALA A 603 -179.09 -174.53
REMARK 500 LEU A 692 -55.07 -128.63
REMARK 500 SER A 718 -147.82 -95.86
REMARK 500 GLU A 985 -52.45 -149.98
REMARK 500 GLU A 985 -50.43 -149.98
REMARK 500 THR A1069 52.10 -115.95
REMARK 500 LEU A1097 -58.30 -127.26
REMARK 500 THR A1123 -161.75 -116.43
REMARK 500 ASP A1177 152.57 69.38
REMARK 500
REMARK 500 REMARK: NULL
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 8A30 RELATED DB: PDB
REMARK 900 SAME PROTEIN WITH NADP AND MALONATE BOUND
REMARK 900 RELATED ID: 8A7S RELATED DB: PDB
REMARK 900 SAME PROTEIN WITH MALONATE BOUND
DBREF 8A8T A 550 1219 UNP A9WIU3 A9WIU3_CHLAA 550 1219
SEQRES 1 A 670 SER ALA THR THR GLY ALA ARG SER ALA SER VAL GLY TRP
SEQRES 2 A 670 ALA GLU SER LEU ILE GLY LEU HIS LEU GLY LYS VAL ALA
SEQRES 3 A 670 LEU ILE THR GLY GLY SER ALA GLY ILE GLY GLY GLN ILE
SEQRES 4 A 670 GLY ARG LEU LEU ALA LEU SER GLY ALA ARG VAL MET LEU
SEQRES 5 A 670 ALA ALA ARG ASP ARG HIS LYS LEU GLU GLN MET GLN ALA
SEQRES 6 A 670 MET ILE GLN SER GLU LEU ALA GLU VAL GLY TYR THR ASP
SEQRES 7 A 670 VAL GLU ASP ARG VAL HIS ILE ALA PRO GLY CYS ASP VAL
SEQRES 8 A 670 SER SER GLU ALA GLN LEU ALA ASP LEU VAL GLU ARG THR
SEQRES 9 A 670 LEU SER ALA PHE GLY THR VAL ASP TYR LEU ILE ASN ASN
SEQRES 10 A 670 ALA GLY ILE ALA GLY VAL GLU GLU MET VAL ILE ASP MET
SEQRES 11 A 670 PRO VAL GLU GLY TRP ARG HIS THR LEU PHE ALA ASN LEU
SEQRES 12 A 670 ILE SER ASN TYR SER LEU MET ARG LYS LEU ALA PRO LEU
SEQRES 13 A 670 MET LYS LYS GLN GLY SER GLY TYR ILE LEU ASN VAL SER
SEQRES 14 A 670 SER TYR PHE GLY GLY GLU LYS ASP ALA ALA ILE PRO TYR
SEQRES 15 A 670 PRO ASN ARG ALA ASP TYR ALA VAL SER LYS ALA GLY GLN
SEQRES 16 A 670 ARG ALA MET ALA GLU VAL PHE ALA ARG PHE LEU GLY PRO
SEQRES 17 A 670 GLU ILE GLN ILE ASN ALA ILE ALA PRO GLY PRO VAL GLU
SEQRES 18 A 670 GLY ASP ARG LEU ARG GLY THR GLY GLU ARG PRO GLY LEU
SEQRES 19 A 670 PHE ALA ARG ARG ALA ARG LEU ILE LEU GLU ASN LYS ARG
SEQRES 20 A 670 LEU ASN GLU LEU HIS ALA ALA LEU ILE ALA ALA ALA ARG
SEQRES 21 A 670 THR ASP GLU ARG SER MET HIS GLU LEU VAL GLU LEU LEU
SEQRES 22 A 670 LEU PRO ASN ASP VAL ALA ALA LEU GLU GLN ASN PRO ALA
SEQRES 23 A 670 ALA PRO THR ALA LEU ARG GLU LEU ALA ARG ARG PHE ARG
SEQRES 24 A 670 SER GLU GLY ASP PRO ALA ALA SER SER SER SER ALA LEU
SEQRES 25 A 670 LEU ASN ARG SER ILE ALA ALA LYS LEU LEU ALA ARG LEU
SEQRES 26 A 670 HIS ASN GLY GLY TYR VAL LEU PRO ALA ASP ILE PHE ALA
SEQRES 27 A 670 ASN LEU PRO ASN PRO PRO ASP PRO PHE PHE THR ARG ALA
SEQRES 28 A 670 GLN ILE ASP ARG GLU ALA ARG LYS VAL ARG ASP GLY ILE
SEQRES 29 A 670 MET GLY MET LEU TYR LEU GLN ARG MET PRO THR GLU PHE
SEQRES 30 A 670 ASP VAL ALA MET ALA THR VAL TYR TYR LEU ALA ASP ARG
SEQRES 31 A 670 ASN VAL SER GLY GLU THR PHE HIS PRO SER GLY GLY LEU
SEQRES 32 A 670 ARG TYR GLU ARG THR PRO THR GLY GLY GLU LEU PHE GLY
SEQRES 33 A 670 LEU PRO SER PRO GLU ARG LEU ALA GLU LEU VAL GLY SER
SEQRES 34 A 670 THR VAL TYR LEU ILE GLY GLU HIS LEU THR GLU HIS LEU
SEQRES 35 A 670 ASN LEU LEU ALA ARG ALA TYR LEU GLU ARG TYR GLY ALA
SEQRES 36 A 670 ARG GLN VAL VAL MET ILE VAL GLU THR GLU THR GLY ALA
SEQRES 37 A 670 GLU THR MET ARG ARG LEU LEU HIS ASP HIS VAL GLU ALA
SEQRES 38 A 670 GLY ARG LEU MET THR ILE VAL ALA GLY ASP GLN ILE GLU
SEQRES 39 A 670 ALA ALA ILE ASP GLN ALA ILE THR ARG TYR GLY ARG PRO
SEQRES 40 A 670 GLY PRO VAL VAL CYS THR PRO PHE ARG PRO LEU PRO THR
SEQRES 41 A 670 VAL PRO LEU VAL GLY ARG LYS ASP SER ASP TRP SER THR
SEQRES 42 A 670 VAL LEU SER GLU ALA GLU PHE ALA GLU LEU CYS GLU HIS
SEQRES 43 A 670 GLN LEU THR HIS HIS PHE ARG VAL ALA ARG LYS ILE ALA
SEQRES 44 A 670 LEU SER ASP GLY ALA SER LEU ALA LEU VAL THR PRO GLU
SEQRES 45 A 670 THR THR ALA THR SER THR THR GLU GLN PHE ALA LEU ALA
SEQRES 46 A 670 ASN PHE ILE LYS THR THR LEU HIS ALA PHE THR ALA THR
SEQRES 47 A 670 ILE GLY VAL GLU SER GLU ARG THR ALA GLN ARG ILE LEU
SEQRES 48 A 670 ILE ASN GLN VAL ASP LEU THR ARG ARG ALA ARG ALA GLU
SEQRES 49 A 670 GLU PRO ARG ASP PRO HIS GLU ARG GLN GLN GLU LEU GLU
SEQRES 50 A 670 ARG PHE ILE GLU ALA VAL LEU LEU VAL THR ALA PRO LEU
SEQRES 51 A 670 PRO PRO GLU ALA ASP THR ARG TYR ALA GLY ARG ILE HIS
SEQRES 52 A 670 ARG GLY ARG ALA ILE THR VAL
HET NAP A1301 48
HET MLI A1302 7
HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
HETNAM MLI MALONATE ION
HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
FORMUL 2 NAP C21 H28 N7 O17 P3
FORMUL 3 MLI C3 H2 O4 2-
FORMUL 4 HOH *282(H2 O)
HELIX 1 AA1 GLY A 561 LEU A 566 5 6
HELIX 2 AA2 ALA A 582 SER A 595 1 14
HELIX 3 AA3 ASP A 605 GLY A 624 1 20
HELIX 4 AA4 ASP A 627 ASP A 630 5 4
HELIX 5 AA5 SER A 642 GLY A 658 1 17
HELIX 6 AA6 MET A 675 MET A 679 5 5
HELIX 7 AA7 PRO A 680 LEU A 692 1 13
HELIX 8 AA8 LEU A 692 GLY A 710 1 19
HELIX 9 AA9 SER A 719 GLY A 723 5 5
HELIX 10 AB1 ARG A 734 GLY A 756 1 23
HELIX 11 AB2 GLY A 771 GLY A 776 1 6
HELIX 12 AB3 GLY A 782 THR A 810 1 29
HELIX 13 AB4 SER A 814 LEU A 821 1 8
HELIX 14 AB5 ASP A 826 GLN A 832 1 7
HELIX 15 AB6 PRO A 837 GLY A 851 1 15
HELIX 16 AB7 ALA A 855 SER A 859 5 5
HELIX 17 AB8 ASN A 863 GLY A 877 1 15
HELIX 18 AB9 THR A 898 LEU A 917 1 20
HELIX 19 AC1 THR A 924 ALA A 937 1 14
HELIX 20 AC2 SER A 968 GLU A 974 1 7
HELIX 21 AC3 LEU A 987 ARG A 1001 1 15
HELIX 22 AC4 THR A 1013 LEU A 1024 1 12
HELIX 23 AC5 LEU A 1024 ALA A 1030 1 7
HELIX 24 AC6 GLN A 1041 GLY A 1054 1 14
HELIX 25 AC7 SER A 1085 LEU A 1097 1 13
HELIX 26 AC8 LEU A 1097 ALA A 1108 1 12
HELIX 27 AC9 THR A 1127 THR A 1155 1 29
HELIX 28 AD1 ARG A 1176 ALA A 1197 1 22
SHEET 1 AA1 7 VAL A 632 ALA A 635 0
SHEET 2 AA1 7 ARG A 598 ALA A 602 1 N VAL A 599 O HIS A 633
SHEET 3 AA1 7 VAL A 574 THR A 578 1 N ALA A 575 O ARG A 598
SHEET 4 AA1 7 TYR A 662 ASN A 665 1 O ILE A 664 N LEU A 576
SHEET 5 AA1 7 GLY A 712 VAL A 717 1 O LEU A 715 N LEU A 663
SHEET 6 AA1 7 ILE A 759 ILE A 764 1 O GLN A 760 N ILE A 714
SHEET 7 AA1 7 THR A 945 PHE A 946 1 O PHE A 946 N ALA A 763
SHEET 1 AA2 2 ALA A 727 ALA A 728 0
SHEET 2 AA2 2 THR A 957 PRO A 958 -1 O THR A 957 N ALA A 728
SHEET 1 AA3 6 LEU A1033 VAL A1037 0
SHEET 2 AA3 6 GLN A1006 VAL A1011 1 N MET A1009 O MET A1034
SHEET 3 AA3 6 THR A 979 ILE A 983 1 N LEU A 982 O ILE A1010
SHEET 4 AA3 6 PRO A1058 CYS A1061 1 O VAL A1060 N ILE A 983
SHEET 5 AA3 6 SER A1114 VAL A1118 1 O ALA A1116 N CYS A1061
SHEET 6 AA3 6 LEU A1160 VAL A1164 1 O LEU A1160 N LEU A1115
CISPEP 1 GLY A 756 PRO A 757 0 3.96
CISPEP 2 ASP A 894 PRO A 895 0 -0.11
CRYST1 100.960 126.290 74.330 90.00 104.84 90.00 C 1 2 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.009905 0.000000 0.002624 0.00000
SCALE2 0.000000 0.007918 0.000000 0.00000
SCALE3 0.000000 0.000000 0.013918 0.00000