data_8A9U # _entry.id 8A9U # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8A9U pdb_00008a9u 10.2210/pdb8a9u/pdb WWPDB D_1292123781 ? ? EMDB EMD-15286 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-09-21 2 'Structure model' 1 1 2022-11-23 3 'Structure model' 1 2 2024-11-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Refinement description' 4 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' em_3d_fitting_list 6 3 'Structure model' em_admin 7 3 'Structure model' pdbx_entry_details 8 3 'Structure model' pdbx_initial_refinement_model 9 3 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.title' 5 2 'Structure model' '_citation_author.name' 6 3 'Structure model' '_em_3d_fitting_list.accession_code' 7 3 'Structure model' '_em_3d_fitting_list.initial_refinement_model_id' 8 3 'Structure model' '_em_3d_fitting_list.source_name' 9 3 'Structure model' '_em_3d_fitting_list.type' 10 3 'Structure model' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8A9U _pdbx_database_status.recvd_initial_deposition_date 2022-06-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Full AAV3B-VP1KO virion' _pdbx_database_related.db_id EMD-15286 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 3 _pdbx_contact_author.email nabrescia@cicbiogune.es _pdbx_contact_author.name_first Nicola _pdbx_contact_author.name_last Abrescia _pdbx_contact_author.name_mi GA _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-5559-1918 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Arriaga, I.' 1 0000-0003-4369-8990 'Abrescia, N.G.A.' 2 0000-0001-5559-1918 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Hum Gene Ther' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1557-7422 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 33 _citation.language ? _citation.page_first 1142 _citation.page_last 1156 _citation.title 'Cellular and Structural Characterization of VP1 and VP2 Knockout Mutants of AAV3B Serotype and Implications for AAV Manufacturing.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1089/hum.2022.119 _citation.pdbx_database_id_PubMed 36082996 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Arriaga, I.' 1 ? primary 'Navarro, A.' 2 ? primary 'Etxabe, A.' 3 ? primary 'Trigueros, C.' 4 ? primary 'Samulski, R.J.' 5 ? primary 'Moullier, P.' 6 ? primary 'Francois, A.' 7 ? primary 'Abrescia, N.G.A.' 8 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Capsid protein VP1' _entity.formula_weight 66728.281 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ;For pXR3b-VP1KO, the ATG start codon of VP1 was changed to TGA, and the GAT codon of Asp4 was changed to GAC to remove an alternative ATG. Thus this sample only has VP2 and VP3. ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;TAPGKKRPVDQSPQEPDSSSGVGKSGKQPARKRLNFGQTGDSESVPDPQPLGEPPAAPTSLGSNTMASGGGAPMADNNEG ADGVGNSSGNWHCDSQWLGDRVITTSTRTWALPTYNNHLYKQISSQSGASNDNHYFGYSTPWGYFDFNRFHCHFSPRDWQ RLINNNWGFRPKKLSFKLFNIQVKEVTQNDGTTTIANNLTSTVQVFTDSEYQLPYVLGSAHQGCLPPFPADVFMVPQYGY LTLNNGSQAVGRSSFYCLEYFPSQMLRTGNNFQFSYTFEDVPFHSSYAHSQSLDRLMNPLIDQYLYYLNRTQGTTSGTTN QSRLLFSQAGPQSMSLQARNWLPGPCYRQQRLSKTANDNNNSNFPWTAASKYHLNGRDSLVNPGPAMASHKDDEEKFFPM HGNLIFGKEGTTASNAELDNVMITDEEEIRTTNPVATEQYGTVANNLQSSNTAPTTRTVNDQGALPGMVWQDRDVYLQGP IWAKIPHTDGHFHPSPLMGGFGLKHPPPQIMIKNTPVPANPPTTFSPAKFASFITQYSTGQVSVEIEWELQKENSKRWNP EIQYTSNYNKSVNVDFTVDTNGVYSEPRPIGTRYLTRNL ; _entity_poly.pdbx_seq_one_letter_code_can ;TAPGKKRPVDQSPQEPDSSSGVGKSGKQPARKRLNFGQTGDSESVPDPQPLGEPPAAPTSLGSNTMASGGGAPMADNNEG ADGVGNSSGNWHCDSQWLGDRVITTSTRTWALPTYNNHLYKQISSQSGASNDNHYFGYSTPWGYFDFNRFHCHFSPRDWQ RLINNNWGFRPKKLSFKLFNIQVKEVTQNDGTTTIANNLTSTVQVFTDSEYQLPYVLGSAHQGCLPPFPADVFMVPQYGY LTLNNGSQAVGRSSFYCLEYFPSQMLRTGNNFQFSYTFEDVPFHSSYAHSQSLDRLMNPLIDQYLYYLNRTQGTTSGTTN QSRLLFSQAGPQSMSLQARNWLPGPCYRQQRLSKTANDNNNSNFPWTAASKYHLNGRDSLVNPGPAMASHKDDEEKFFPM HGNLIFGKEGTTASNAELDNVMITDEEEIRTTNPVATEQYGTVANNLQSSNTAPTTRTVNDQGALPGMVWQDRDVYLQGP IWAKIPHTDGHFHPSPLMGGFGLKHPPPQIMIKNTPVPANPPTTFSPAKFASFITQYSTGQVSVEIEWELQKENSKRWNP EIQYTSNYNKSVNVDFTVDTNGVYSEPRPIGTRYLTRNL ; _entity_poly.pdbx_strand_id 0 _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 ALA n 1 3 PRO n 1 4 GLY n 1 5 LYS n 1 6 LYS n 1 7 ARG n 1 8 PRO n 1 9 VAL n 1 10 ASP n 1 11 GLN n 1 12 SER n 1 13 PRO n 1 14 GLN n 1 15 GLU n 1 16 PRO n 1 17 ASP n 1 18 SER n 1 19 SER n 1 20 SER n 1 21 GLY n 1 22 VAL n 1 23 GLY n 1 24 LYS n 1 25 SER n 1 26 GLY n 1 27 LYS n 1 28 GLN n 1 29 PRO n 1 30 ALA n 1 31 ARG n 1 32 LYS n 1 33 ARG n 1 34 LEU n 1 35 ASN n 1 36 PHE n 1 37 GLY n 1 38 GLN n 1 39 THR n 1 40 GLY n 1 41 ASP n 1 42 SER n 1 43 GLU n 1 44 SER n 1 45 VAL n 1 46 PRO n 1 47 ASP n 1 48 PRO n 1 49 GLN n 1 50 PRO n 1 51 LEU n 1 52 GLY n 1 53 GLU n 1 54 PRO n 1 55 PRO n 1 56 ALA n 1 57 ALA n 1 58 PRO n 1 59 THR n 1 60 SER n 1 61 LEU n 1 62 GLY n 1 63 SER n 1 64 ASN n 1 65 THR n 1 66 MET n 1 67 ALA n 1 68 SER n 1 69 GLY n 1 70 GLY n 1 71 GLY n 1 72 ALA n 1 73 PRO n 1 74 MET n 1 75 ALA n 1 76 ASP n 1 77 ASN n 1 78 ASN n 1 79 GLU n 1 80 GLY n 1 81 ALA n 1 82 ASP n 1 83 GLY n 1 84 VAL n 1 85 GLY n 1 86 ASN n 1 87 SER n 1 88 SER n 1 89 GLY n 1 90 ASN n 1 91 TRP n 1 92 HIS n 1 93 CYS n 1 94 ASP n 1 95 SER n 1 96 GLN n 1 97 TRP n 1 98 LEU n 1 99 GLY n 1 100 ASP n 1 101 ARG n 1 102 VAL n 1 103 ILE n 1 104 THR n 1 105 THR n 1 106 SER n 1 107 THR n 1 108 ARG n 1 109 THR n 1 110 TRP n 1 111 ALA n 1 112 LEU n 1 113 PRO n 1 114 THR n 1 115 TYR n 1 116 ASN n 1 117 ASN n 1 118 HIS n 1 119 LEU n 1 120 TYR n 1 121 LYS n 1 122 GLN n 1 123 ILE n 1 124 SER n 1 125 SER n 1 126 GLN n 1 127 SER n 1 128 GLY n 1 129 ALA n 1 130 SER n 1 131 ASN n 1 132 ASP n 1 133 ASN n 1 134 HIS n 1 135 TYR n 1 136 PHE n 1 137 GLY n 1 138 TYR n 1 139 SER n 1 140 THR n 1 141 PRO n 1 142 TRP n 1 143 GLY n 1 144 TYR n 1 145 PHE n 1 146 ASP n 1 147 PHE n 1 148 ASN n 1 149 ARG n 1 150 PHE n 1 151 HIS n 1 152 CYS n 1 153 HIS n 1 154 PHE n 1 155 SER n 1 156 PRO n 1 157 ARG n 1 158 ASP n 1 159 TRP n 1 160 GLN n 1 161 ARG n 1 162 LEU n 1 163 ILE n 1 164 ASN n 1 165 ASN n 1 166 ASN n 1 167 TRP n 1 168 GLY n 1 169 PHE n 1 170 ARG n 1 171 PRO n 1 172 LYS n 1 173 LYS n 1 174 LEU n 1 175 SER n 1 176 PHE n 1 177 LYS n 1 178 LEU n 1 179 PHE n 1 180 ASN n 1 181 ILE n 1 182 GLN n 1 183 VAL n 1 184 LYS n 1 185 GLU n 1 186 VAL n 1 187 THR n 1 188 GLN n 1 189 ASN n 1 190 ASP n 1 191 GLY n 1 192 THR n 1 193 THR n 1 194 THR n 1 195 ILE n 1 196 ALA n 1 197 ASN n 1 198 ASN n 1 199 LEU n 1 200 THR n 1 201 SER n 1 202 THR n 1 203 VAL n 1 204 GLN n 1 205 VAL n 1 206 PHE n 1 207 THR n 1 208 ASP n 1 209 SER n 1 210 GLU n 1 211 TYR n 1 212 GLN n 1 213 LEU n 1 214 PRO n 1 215 TYR n 1 216 VAL n 1 217 LEU n 1 218 GLY n 1 219 SER n 1 220 ALA n 1 221 HIS n 1 222 GLN n 1 223 GLY n 1 224 CYS n 1 225 LEU n 1 226 PRO n 1 227 PRO n 1 228 PHE n 1 229 PRO n 1 230 ALA n 1 231 ASP n 1 232 VAL n 1 233 PHE n 1 234 MET n 1 235 VAL n 1 236 PRO n 1 237 GLN n 1 238 TYR n 1 239 GLY n 1 240 TYR n 1 241 LEU n 1 242 THR n 1 243 LEU n 1 244 ASN n 1 245 ASN n 1 246 GLY n 1 247 SER n 1 248 GLN n 1 249 ALA n 1 250 VAL n 1 251 GLY n 1 252 ARG n 1 253 SER n 1 254 SER n 1 255 PHE n 1 256 TYR n 1 257 CYS n 1 258 LEU n 1 259 GLU n 1 260 TYR n 1 261 PHE n 1 262 PRO n 1 263 SER n 1 264 GLN n 1 265 MET n 1 266 LEU n 1 267 ARG n 1 268 THR n 1 269 GLY n 1 270 ASN n 1 271 ASN n 1 272 PHE n 1 273 GLN n 1 274 PHE n 1 275 SER n 1 276 TYR n 1 277 THR n 1 278 PHE n 1 279 GLU n 1 280 ASP n 1 281 VAL n 1 282 PRO n 1 283 PHE n 1 284 HIS n 1 285 SER n 1 286 SER n 1 287 TYR n 1 288 ALA n 1 289 HIS n 1 290 SER n 1 291 GLN n 1 292 SER n 1 293 LEU n 1 294 ASP n 1 295 ARG n 1 296 LEU n 1 297 MET n 1 298 ASN n 1 299 PRO n 1 300 LEU n 1 301 ILE n 1 302 ASP n 1 303 GLN n 1 304 TYR n 1 305 LEU n 1 306 TYR n 1 307 TYR n 1 308 LEU n 1 309 ASN n 1 310 ARG n 1 311 THR n 1 312 GLN n 1 313 GLY n 1 314 THR n 1 315 THR n 1 316 SER n 1 317 GLY n 1 318 THR n 1 319 THR n 1 320 ASN n 1 321 GLN n 1 322 SER n 1 323 ARG n 1 324 LEU n 1 325 LEU n 1 326 PHE n 1 327 SER n 1 328 GLN n 1 329 ALA n 1 330 GLY n 1 331 PRO n 1 332 GLN n 1 333 SER n 1 334 MET n 1 335 SER n 1 336 LEU n 1 337 GLN n 1 338 ALA n 1 339 ARG n 1 340 ASN n 1 341 TRP n 1 342 LEU n 1 343 PRO n 1 344 GLY n 1 345 PRO n 1 346 CYS n 1 347 TYR n 1 348 ARG n 1 349 GLN n 1 350 GLN n 1 351 ARG n 1 352 LEU n 1 353 SER n 1 354 LYS n 1 355 THR n 1 356 ALA n 1 357 ASN n 1 358 ASP n 1 359 ASN n 1 360 ASN n 1 361 ASN n 1 362 SER n 1 363 ASN n 1 364 PHE n 1 365 PRO n 1 366 TRP n 1 367 THR n 1 368 ALA n 1 369 ALA n 1 370 SER n 1 371 LYS n 1 372 TYR n 1 373 HIS n 1 374 LEU n 1 375 ASN n 1 376 GLY n 1 377 ARG n 1 378 ASP n 1 379 SER n 1 380 LEU n 1 381 VAL n 1 382 ASN n 1 383 PRO n 1 384 GLY n 1 385 PRO n 1 386 ALA n 1 387 MET n 1 388 ALA n 1 389 SER n 1 390 HIS n 1 391 LYS n 1 392 ASP n 1 393 ASP n 1 394 GLU n 1 395 GLU n 1 396 LYS n 1 397 PHE n 1 398 PHE n 1 399 PRO n 1 400 MET n 1 401 HIS n 1 402 GLY n 1 403 ASN n 1 404 LEU n 1 405 ILE n 1 406 PHE n 1 407 GLY n 1 408 LYS n 1 409 GLU n 1 410 GLY n 1 411 THR n 1 412 THR n 1 413 ALA n 1 414 SER n 1 415 ASN n 1 416 ALA n 1 417 GLU n 1 418 LEU n 1 419 ASP n 1 420 ASN n 1 421 VAL n 1 422 MET n 1 423 ILE n 1 424 THR n 1 425 ASP n 1 426 GLU n 1 427 GLU n 1 428 GLU n 1 429 ILE n 1 430 ARG n 1 431 THR n 1 432 THR n 1 433 ASN n 1 434 PRO n 1 435 VAL n 1 436 ALA n 1 437 THR n 1 438 GLU n 1 439 GLN n 1 440 TYR n 1 441 GLY n 1 442 THR n 1 443 VAL n 1 444 ALA n 1 445 ASN n 1 446 ASN n 1 447 LEU n 1 448 GLN n 1 449 SER n 1 450 SER n 1 451 ASN n 1 452 THR n 1 453 ALA n 1 454 PRO n 1 455 THR n 1 456 THR n 1 457 ARG n 1 458 THR n 1 459 VAL n 1 460 ASN n 1 461 ASP n 1 462 GLN n 1 463 GLY n 1 464 ALA n 1 465 LEU n 1 466 PRO n 1 467 GLY n 1 468 MET n 1 469 VAL n 1 470 TRP n 1 471 GLN n 1 472 ASP n 1 473 ARG n 1 474 ASP n 1 475 VAL n 1 476 TYR n 1 477 LEU n 1 478 GLN n 1 479 GLY n 1 480 PRO n 1 481 ILE n 1 482 TRP n 1 483 ALA n 1 484 LYS n 1 485 ILE n 1 486 PRO n 1 487 HIS n 1 488 THR n 1 489 ASP n 1 490 GLY n 1 491 HIS n 1 492 PHE n 1 493 HIS n 1 494 PRO n 1 495 SER n 1 496 PRO n 1 497 LEU n 1 498 MET n 1 499 GLY n 1 500 GLY n 1 501 PHE n 1 502 GLY n 1 503 LEU n 1 504 LYS n 1 505 HIS n 1 506 PRO n 1 507 PRO n 1 508 PRO n 1 509 GLN n 1 510 ILE n 1 511 MET n 1 512 ILE n 1 513 LYS n 1 514 ASN n 1 515 THR n 1 516 PRO n 1 517 VAL n 1 518 PRO n 1 519 ALA n 1 520 ASN n 1 521 PRO n 1 522 PRO n 1 523 THR n 1 524 THR n 1 525 PHE n 1 526 SER n 1 527 PRO n 1 528 ALA n 1 529 LYS n 1 530 PHE n 1 531 ALA n 1 532 SER n 1 533 PHE n 1 534 ILE n 1 535 THR n 1 536 GLN n 1 537 TYR n 1 538 SER n 1 539 THR n 1 540 GLY n 1 541 GLN n 1 542 VAL n 1 543 SER n 1 544 VAL n 1 545 GLU n 1 546 ILE n 1 547 GLU n 1 548 TRP n 1 549 GLU n 1 550 LEU n 1 551 GLN n 1 552 LYS n 1 553 GLU n 1 554 ASN n 1 555 SER n 1 556 LYS n 1 557 ARG n 1 558 TRP n 1 559 ASN n 1 560 PRO n 1 561 GLU n 1 562 ILE n 1 563 GLN n 1 564 TYR n 1 565 THR n 1 566 SER n 1 567 ASN n 1 568 TYR n 1 569 ASN n 1 570 LYS n 1 571 SER n 1 572 VAL n 1 573 ASN n 1 574 VAL n 1 575 ASP n 1 576 PHE n 1 577 THR n 1 578 VAL n 1 579 ASP n 1 580 THR n 1 581 ASN n 1 582 GLY n 1 583 VAL n 1 584 TYR n 1 585 SER n 1 586 GLU n 1 587 PRO n 1 588 ARG n 1 589 PRO n 1 590 ILE n 1 591 GLY n 1 592 THR n 1 593 ARG n 1 594 TYR n 1 595 LEU n 1 596 THR n 1 597 ARG n 1 598 ASN n 1 599 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 599 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line Pro10TM _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details 'AAV2 rep and AAV3B cap genes' _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pXR3b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 138 ? ? ? 0 . n A 1 2 ALA 2 139 ? ? ? 0 . n A 1 3 PRO 3 140 ? ? ? 0 . n A 1 4 GLY 4 141 ? ? ? 0 . n A 1 5 LYS 5 142 ? ? ? 0 . n A 1 6 LYS 6 143 ? ? ? 0 . n A 1 7 ARG 7 144 ? ? ? 0 . n A 1 8 PRO 8 145 ? ? ? 0 . n A 1 9 VAL 9 146 ? ? ? 0 . n A 1 10 ASP 10 147 ? ? ? 0 . n A 1 11 GLN 11 148 ? ? ? 0 . n A 1 12 SER 12 149 ? ? ? 0 . n A 1 13 PRO 13 150 ? ? ? 0 . n A 1 14 GLN 14 151 ? ? ? 0 . n A 1 15 GLU 15 152 ? ? ? 0 . n A 1 16 PRO 16 153 ? ? ? 0 . n A 1 17 ASP 17 154 ? ? ? 0 . n A 1 18 SER 18 155 ? ? ? 0 . n A 1 19 SER 19 156 ? ? ? 0 . n A 1 20 SER 20 157 ? ? ? 0 . n A 1 21 GLY 21 158 ? ? ? 0 . n A 1 22 VAL 22 159 ? ? ? 0 . n A 1 23 GLY 23 160 ? ? ? 0 . n A 1 24 LYS 24 161 ? ? ? 0 . n A 1 25 SER 25 162 ? ? ? 0 . n A 1 26 GLY 26 163 ? ? ? 0 . n A 1 27 LYS 27 164 ? ? ? 0 . n A 1 28 GLN 28 165 ? ? ? 0 . n A 1 29 PRO 29 166 ? ? ? 0 . n A 1 30 ALA 30 167 ? ? ? 0 . n A 1 31 ARG 31 168 ? ? ? 0 . n A 1 32 LYS 32 169 ? ? ? 0 . n A 1 33 ARG 33 170 ? ? ? 0 . n A 1 34 LEU 34 171 ? ? ? 0 . n A 1 35 ASN 35 172 ? ? ? 0 . n A 1 36 PHE 36 173 ? ? ? 0 . n A 1 37 GLY 37 174 ? ? ? 0 . n A 1 38 GLN 38 175 ? ? ? 0 . n A 1 39 THR 39 176 ? ? ? 0 . n A 1 40 GLY 40 177 ? ? ? 0 . n A 1 41 ASP 41 178 ? ? ? 0 . n A 1 42 SER 42 179 ? ? ? 0 . n A 1 43 GLU 43 180 ? ? ? 0 . n A 1 44 SER 44 181 ? ? ? 0 . n A 1 45 VAL 45 182 ? ? ? 0 . n A 1 46 PRO 46 183 ? ? ? 0 . n A 1 47 ASP 47 184 ? ? ? 0 . n A 1 48 PRO 48 185 ? ? ? 0 . n A 1 49 GLN 49 186 ? ? ? 0 . n A 1 50 PRO 50 187 ? ? ? 0 . n A 1 51 LEU 51 188 ? ? ? 0 . n A 1 52 GLY 52 189 ? ? ? 0 . n A 1 53 GLU 53 190 ? ? ? 0 . n A 1 54 PRO 54 191 ? ? ? 0 . n A 1 55 PRO 55 192 ? ? ? 0 . n A 1 56 ALA 56 193 ? ? ? 0 . n A 1 57 ALA 57 194 ? ? ? 0 . n A 1 58 PRO 58 195 ? ? ? 0 . n A 1 59 THR 59 196 ? ? ? 0 . n A 1 60 SER 60 197 ? ? ? 0 . n A 1 61 LEU 61 198 ? ? ? 0 . n A 1 62 GLY 62 199 ? ? ? 0 . n A 1 63 SER 63 200 ? ? ? 0 . n A 1 64 ASN 64 201 ? ? ? 0 . n A 1 65 THR 65 202 ? ? ? 0 . n A 1 66 MET 66 203 ? ? ? 0 . n A 1 67 ALA 67 204 ? ? ? 0 . n A 1 68 SER 68 205 ? ? ? 0 . n A 1 69 GLY 69 206 ? ? ? 0 . n A 1 70 GLY 70 207 ? ? ? 0 . n A 1 71 GLY 71 208 ? ? ? 0 . n A 1 72 ALA 72 209 ? ? ? 0 . n A 1 73 PRO 73 210 ? ? ? 0 . n A 1 74 MET 74 211 ? ? ? 0 . n A 1 75 ALA 75 212 ? ? ? 0 . n A 1 76 ASP 76 213 ? ? ? 0 . n A 1 77 ASN 77 214 ? ? ? 0 . n A 1 78 ASN 78 215 ? ? ? 0 . n A 1 79 GLU 79 216 ? ? ? 0 . n A 1 80 GLY 80 217 ? ? ? 0 . n A 1 81 ALA 81 218 218 ALA ALA 0 . n A 1 82 ASP 82 219 219 ASP ASP 0 . n A 1 83 GLY 83 220 220 GLY GLY 0 . n A 1 84 VAL 84 221 221 VAL VAL 0 . n A 1 85 GLY 85 222 222 GLY GLY 0 . n A 1 86 ASN 86 223 223 ASN ASN 0 . n A 1 87 SER 87 224 224 SER SER 0 . n A 1 88 SER 88 225 225 SER SER 0 . n A 1 89 GLY 89 226 226 GLY GLY 0 . n A 1 90 ASN 90 227 227 ASN ASN 0 . n A 1 91 TRP 91 228 228 TRP TRP 0 . n A 1 92 HIS 92 229 229 HIS HIS 0 . n A 1 93 CYS 93 230 230 CYS CYS 0 . n A 1 94 ASP 94 231 231 ASP ASP 0 . n A 1 95 SER 95 232 232 SER SER 0 . n A 1 96 GLN 96 233 233 GLN GLN 0 . n A 1 97 TRP 97 234 234 TRP TRP 0 . n A 1 98 LEU 98 235 235 LEU LEU 0 . n A 1 99 GLY 99 236 236 GLY GLY 0 . n A 1 100 ASP 100 237 237 ASP ASP 0 . n A 1 101 ARG 101 238 238 ARG ARG 0 . n A 1 102 VAL 102 239 239 VAL VAL 0 . n A 1 103 ILE 103 240 240 ILE ILE 0 . n A 1 104 THR 104 241 241 THR THR 0 . n A 1 105 THR 105 242 242 THR THR 0 . n A 1 106 SER 106 243 243 SER SER 0 . n A 1 107 THR 107 244 244 THR THR 0 . n A 1 108 ARG 108 245 245 ARG ARG 0 . n A 1 109 THR 109 246 246 THR THR 0 . n A 1 110 TRP 110 247 247 TRP TRP 0 . n A 1 111 ALA 111 248 248 ALA ALA 0 . n A 1 112 LEU 112 249 249 LEU LEU 0 . n A 1 113 PRO 113 250 250 PRO PRO 0 . n A 1 114 THR 114 251 251 THR THR 0 . n A 1 115 TYR 115 252 252 TYR TYR 0 . n A 1 116 ASN 116 253 253 ASN ASN 0 . n A 1 117 ASN 117 254 254 ASN ASN 0 . n A 1 118 HIS 118 255 255 HIS HIS 0 . n A 1 119 LEU 119 256 256 LEU LEU 0 . n A 1 120 TYR 120 257 257 TYR TYR 0 . n A 1 121 LYS 121 258 258 LYS LYS 0 . n A 1 122 GLN 122 259 259 GLN GLN 0 . n A 1 123 ILE 123 260 260 ILE ILE 0 . n A 1 124 SER 124 261 261 SER SER 0 . n A 1 125 SER 125 262 262 SER SER 0 . n A 1 126 GLN 126 263 263 GLN GLN 0 . n A 1 127 SER 127 264 264 SER SER 0 . n A 1 128 GLY 128 265 265 GLY GLY 0 . n A 1 129 ALA 129 266 266 ALA ALA 0 . n A 1 130 SER 130 267 267 SER SER 0 . n A 1 131 ASN 131 268 268 ASN ASN 0 . n A 1 132 ASP 132 269 269 ASP ASP 0 . n A 1 133 ASN 133 270 270 ASN ASN 0 . n A 1 134 HIS 134 271 271 HIS HIS 0 . n A 1 135 TYR 135 272 272 TYR TYR 0 . n A 1 136 PHE 136 273 273 PHE PHE 0 . n A 1 137 GLY 137 274 274 GLY GLY 0 . n A 1 138 TYR 138 275 275 TYR TYR 0 . n A 1 139 SER 139 276 276 SER SER 0 . n A 1 140 THR 140 277 277 THR THR 0 . n A 1 141 PRO 141 278 278 PRO PRO 0 . n A 1 142 TRP 142 279 279 TRP TRP 0 . n A 1 143 GLY 143 280 280 GLY GLY 0 . n A 1 144 TYR 144 281 281 TYR TYR 0 . n A 1 145 PHE 145 282 282 PHE PHE 0 . n A 1 146 ASP 146 283 283 ASP ASP 0 . n A 1 147 PHE 147 284 284 PHE PHE 0 . n A 1 148 ASN 148 285 285 ASN ASN 0 . n A 1 149 ARG 149 286 286 ARG ARG 0 . n A 1 150 PHE 150 287 287 PHE PHE 0 . n A 1 151 HIS 151 288 288 HIS HIS 0 . n A 1 152 CYS 152 289 289 CYS CYS 0 . n A 1 153 HIS 153 290 290 HIS HIS 0 . n A 1 154 PHE 154 291 291 PHE PHE 0 . n A 1 155 SER 155 292 292 SER SER 0 . n A 1 156 PRO 156 293 293 PRO PRO 0 . n A 1 157 ARG 157 294 294 ARG ARG 0 . n A 1 158 ASP 158 295 295 ASP ASP 0 . n A 1 159 TRP 159 296 296 TRP TRP 0 . n A 1 160 GLN 160 297 297 GLN GLN 0 . n A 1 161 ARG 161 298 298 ARG ARG 0 . n A 1 162 LEU 162 299 299 LEU LEU 0 . n A 1 163 ILE 163 300 300 ILE ILE 0 . n A 1 164 ASN 164 301 301 ASN ASN 0 . n A 1 165 ASN 165 302 302 ASN ASN 0 . n A 1 166 ASN 166 303 303 ASN ASN 0 . n A 1 167 TRP 167 304 304 TRP TRP 0 . n A 1 168 GLY 168 305 305 GLY GLY 0 . n A 1 169 PHE 169 306 306 PHE PHE 0 . n A 1 170 ARG 170 307 307 ARG ARG 0 . n A 1 171 PRO 171 308 308 PRO PRO 0 . n A 1 172 LYS 172 309 309 LYS LYS 0 . n A 1 173 LYS 173 310 310 LYS LYS 0 . n A 1 174 LEU 174 311 311 LEU LEU 0 . n A 1 175 SER 175 312 312 SER SER 0 . n A 1 176 PHE 176 313 313 PHE PHE 0 . n A 1 177 LYS 177 314 314 LYS LYS 0 . n A 1 178 LEU 178 315 315 LEU LEU 0 . n A 1 179 PHE 179 316 316 PHE PHE 0 . n A 1 180 ASN 180 317 317 ASN ASN 0 . n A 1 181 ILE 181 318 318 ILE ILE 0 . n A 1 182 GLN 182 319 319 GLN GLN 0 . n A 1 183 VAL 183 320 320 VAL VAL 0 . n A 1 184 LYS 184 321 321 LYS LYS 0 . n A 1 185 GLU 185 322 322 GLU GLU 0 . n A 1 186 VAL 186 323 323 VAL VAL 0 . n A 1 187 THR 187 324 324 THR THR 0 . n A 1 188 GLN 188 325 325 GLN GLN 0 . n A 1 189 ASN 189 326 326 ASN ASN 0 . n A 1 190 ASP 190 327 327 ASP ASP 0 . n A 1 191 GLY 191 328 328 GLY GLY 0 . n A 1 192 THR 192 329 329 THR THR 0 . n A 1 193 THR 193 330 330 THR THR 0 . n A 1 194 THR 194 331 331 THR THR 0 . n A 1 195 ILE 195 332 332 ILE ILE 0 . n A 1 196 ALA 196 333 333 ALA ALA 0 . n A 1 197 ASN 197 334 334 ASN ASN 0 . n A 1 198 ASN 198 335 335 ASN ASN 0 . n A 1 199 LEU 199 336 336 LEU LEU 0 . n A 1 200 THR 200 337 337 THR THR 0 . n A 1 201 SER 201 338 338 SER SER 0 . n A 1 202 THR 202 339 339 THR THR 0 . n A 1 203 VAL 203 340 340 VAL VAL 0 . n A 1 204 GLN 204 341 341 GLN GLN 0 . n A 1 205 VAL 205 342 342 VAL VAL 0 . n A 1 206 PHE 206 343 343 PHE PHE 0 . n A 1 207 THR 207 344 344 THR THR 0 . n A 1 208 ASP 208 345 345 ASP ASP 0 . n A 1 209 SER 209 346 346 SER SER 0 . n A 1 210 GLU 210 347 347 GLU GLU 0 . n A 1 211 TYR 211 348 348 TYR TYR 0 . n A 1 212 GLN 212 349 349 GLN GLN 0 . n A 1 213 LEU 213 350 350 LEU LEU 0 . n A 1 214 PRO 214 351 351 PRO PRO 0 . n A 1 215 TYR 215 352 352 TYR TYR 0 . n A 1 216 VAL 216 353 353 VAL VAL 0 . n A 1 217 LEU 217 354 354 LEU LEU 0 . n A 1 218 GLY 218 355 355 GLY GLY 0 . n A 1 219 SER 219 356 356 SER SER 0 . n A 1 220 ALA 220 357 357 ALA ALA 0 . n A 1 221 HIS 221 358 358 HIS HIS 0 . n A 1 222 GLN 222 359 359 GLN GLN 0 . n A 1 223 GLY 223 360 360 GLY GLY 0 . n A 1 224 CYS 224 361 361 CYS CYS 0 . n A 1 225 LEU 225 362 362 LEU LEU 0 . n A 1 226 PRO 226 363 363 PRO PRO 0 . n A 1 227 PRO 227 364 364 PRO PRO 0 . n A 1 228 PHE 228 365 365 PHE PHE 0 . n A 1 229 PRO 229 366 366 PRO PRO 0 . n A 1 230 ALA 230 367 367 ALA ALA 0 . n A 1 231 ASP 231 368 368 ASP ASP 0 . n A 1 232 VAL 232 369 369 VAL VAL 0 . n A 1 233 PHE 233 370 370 PHE PHE 0 . n A 1 234 MET 234 371 371 MET MET 0 . n A 1 235 VAL 235 372 372 VAL VAL 0 . n A 1 236 PRO 236 373 373 PRO PRO 0 . n A 1 237 GLN 237 374 374 GLN GLN 0 . n A 1 238 TYR 238 375 375 TYR TYR 0 . n A 1 239 GLY 239 376 376 GLY GLY 0 . n A 1 240 TYR 240 377 377 TYR TYR 0 . n A 1 241 LEU 241 378 378 LEU LEU 0 . n A 1 242 THR 242 379 379 THR THR 0 . n A 1 243 LEU 243 380 380 LEU LEU 0 . n A 1 244 ASN 244 381 381 ASN ASN 0 . n A 1 245 ASN 245 382 382 ASN ASN 0 . n A 1 246 GLY 246 383 383 GLY GLY 0 . n A 1 247 SER 247 384 384 SER SER 0 . n A 1 248 GLN 248 385 385 GLN GLN 0 . n A 1 249 ALA 249 386 386 ALA ALA 0 . n A 1 250 VAL 250 387 387 VAL VAL 0 . n A 1 251 GLY 251 388 388 GLY GLY 0 . n A 1 252 ARG 252 389 389 ARG ARG 0 . n A 1 253 SER 253 390 390 SER SER 0 . n A 1 254 SER 254 391 391 SER SER 0 . n A 1 255 PHE 255 392 392 PHE PHE 0 . n A 1 256 TYR 256 393 393 TYR TYR 0 . n A 1 257 CYS 257 394 394 CYS CYS 0 . n A 1 258 LEU 258 395 395 LEU LEU 0 . n A 1 259 GLU 259 396 396 GLU GLU 0 . n A 1 260 TYR 260 397 397 TYR TYR 0 . n A 1 261 PHE 261 398 398 PHE PHE 0 . n A 1 262 PRO 262 399 399 PRO PRO 0 . n A 1 263 SER 263 400 400 SER SER 0 . n A 1 264 GLN 264 401 401 GLN GLN 0 . n A 1 265 MET 265 402 402 MET MET 0 . n A 1 266 LEU 266 403 403 LEU LEU 0 . n A 1 267 ARG 267 404 404 ARG ARG 0 . n A 1 268 THR 268 405 405 THR THR 0 . n A 1 269 GLY 269 406 406 GLY GLY 0 . n A 1 270 ASN 270 407 407 ASN ASN 0 . n A 1 271 ASN 271 408 408 ASN ASN 0 . n A 1 272 PHE 272 409 409 PHE PHE 0 . n A 1 273 GLN 273 410 410 GLN GLN 0 . n A 1 274 PHE 274 411 411 PHE PHE 0 . n A 1 275 SER 275 412 412 SER SER 0 . n A 1 276 TYR 276 413 413 TYR TYR 0 . n A 1 277 THR 277 414 414 THR THR 0 . n A 1 278 PHE 278 415 415 PHE PHE 0 . n A 1 279 GLU 279 416 416 GLU GLU 0 . n A 1 280 ASP 280 417 417 ASP ASP 0 . n A 1 281 VAL 281 418 418 VAL VAL 0 . n A 1 282 PRO 282 419 419 PRO PRO 0 . n A 1 283 PHE 283 420 420 PHE PHE 0 . n A 1 284 HIS 284 421 421 HIS HIS 0 . n A 1 285 SER 285 422 422 SER SER 0 . n A 1 286 SER 286 423 423 SER SER 0 . n A 1 287 TYR 287 424 424 TYR TYR 0 . n A 1 288 ALA 288 425 425 ALA ALA 0 . n A 1 289 HIS 289 426 426 HIS HIS 0 . n A 1 290 SER 290 427 427 SER SER 0 . n A 1 291 GLN 291 428 428 GLN GLN 0 . n A 1 292 SER 292 429 429 SER SER 0 . n A 1 293 LEU 293 430 430 LEU LEU 0 . n A 1 294 ASP 294 431 431 ASP ASP 0 . n A 1 295 ARG 295 432 432 ARG ARG 0 . n A 1 296 LEU 296 433 433 LEU LEU 0 . n A 1 297 MET 297 434 434 MET MET 0 . n A 1 298 ASN 298 435 435 ASN ASN 0 . n A 1 299 PRO 299 436 436 PRO PRO 0 . n A 1 300 LEU 300 437 437 LEU LEU 0 . n A 1 301 ILE 301 438 438 ILE ILE 0 . n A 1 302 ASP 302 439 439 ASP ASP 0 . n A 1 303 GLN 303 440 440 GLN GLN 0 . n A 1 304 TYR 304 441 441 TYR TYR 0 . n A 1 305 LEU 305 442 442 LEU LEU 0 . n A 1 306 TYR 306 443 443 TYR TYR 0 . n A 1 307 TYR 307 444 444 TYR TYR 0 . n A 1 308 LEU 308 445 445 LEU LEU 0 . n A 1 309 ASN 309 446 446 ASN ASN 0 . n A 1 310 ARG 310 447 447 ARG ARG 0 . n A 1 311 THR 311 448 448 THR THR 0 . n A 1 312 GLN 312 449 449 GLN GLN 0 . n A 1 313 GLY 313 450 450 GLY GLY 0 . n A 1 314 THR 314 451 451 THR THR 0 . n A 1 315 THR 315 452 452 THR THR 0 . n A 1 316 SER 316 453 453 SER SER 0 . n A 1 317 GLY 317 454 454 GLY GLY 0 . n A 1 318 THR 318 455 455 THR THR 0 . n A 1 319 THR 319 456 456 THR THR 0 . n A 1 320 ASN 320 457 457 ASN ASN 0 . n A 1 321 GLN 321 458 458 GLN GLN 0 . n A 1 322 SER 322 459 459 SER SER 0 . n A 1 323 ARG 323 460 460 ARG ARG 0 . n A 1 324 LEU 324 461 461 LEU LEU 0 . n A 1 325 LEU 325 462 462 LEU LEU 0 . n A 1 326 PHE 326 463 463 PHE PHE 0 . n A 1 327 SER 327 464 464 SER SER 0 . n A 1 328 GLN 328 465 465 GLN GLN 0 . n A 1 329 ALA 329 466 466 ALA ALA 0 . n A 1 330 GLY 330 467 467 GLY GLY 0 . n A 1 331 PRO 331 468 468 PRO PRO 0 . n A 1 332 GLN 332 469 469 GLN GLN 0 . n A 1 333 SER 333 470 470 SER SER 0 . n A 1 334 MET 334 471 471 MET MET 0 . n A 1 335 SER 335 472 472 SER SER 0 . n A 1 336 LEU 336 473 473 LEU LEU 0 . n A 1 337 GLN 337 474 474 GLN GLN 0 . n A 1 338 ALA 338 475 475 ALA ALA 0 . n A 1 339 ARG 339 476 476 ARG ARG 0 . n A 1 340 ASN 340 477 477 ASN ASN 0 . n A 1 341 TRP 341 478 478 TRP TRP 0 . n A 1 342 LEU 342 479 479 LEU LEU 0 . n A 1 343 PRO 343 480 480 PRO PRO 0 . n A 1 344 GLY 344 481 481 GLY GLY 0 . n A 1 345 PRO 345 482 482 PRO PRO 0 . n A 1 346 CYS 346 483 483 CYS CYS 0 . n A 1 347 TYR 347 484 484 TYR TYR 0 . n A 1 348 ARG 348 485 485 ARG ARG 0 . n A 1 349 GLN 349 486 486 GLN GLN 0 . n A 1 350 GLN 350 487 487 GLN GLN 0 . n A 1 351 ARG 351 488 488 ARG ARG 0 . n A 1 352 LEU 352 489 489 LEU LEU 0 . n A 1 353 SER 353 490 490 SER SER 0 . n A 1 354 LYS 354 491 491 LYS LYS 0 . n A 1 355 THR 355 492 492 THR THR 0 . n A 1 356 ALA 356 493 493 ALA ALA 0 . n A 1 357 ASN 357 494 494 ASN ASN 0 . n A 1 358 ASP 358 495 495 ASP ASP 0 . n A 1 359 ASN 359 496 496 ASN ASN 0 . n A 1 360 ASN 360 497 497 ASN ASN 0 . n A 1 361 ASN 361 498 498 ASN ASN 0 . n A 1 362 SER 362 499 499 SER SER 0 . n A 1 363 ASN 363 500 500 ASN ASN 0 . n A 1 364 PHE 364 501 501 PHE PHE 0 . n A 1 365 PRO 365 502 502 PRO PRO 0 . n A 1 366 TRP 366 503 503 TRP TRP 0 . n A 1 367 THR 367 504 504 THR THR 0 . n A 1 368 ALA 368 505 505 ALA ALA 0 . n A 1 369 ALA 369 506 506 ALA ALA 0 . n A 1 370 SER 370 507 507 SER SER 0 . n A 1 371 LYS 371 508 508 LYS LYS 0 . n A 1 372 TYR 372 509 509 TYR TYR 0 . n A 1 373 HIS 373 510 510 HIS HIS 0 . n A 1 374 LEU 374 511 511 LEU LEU 0 . n A 1 375 ASN 375 512 512 ASN ASN 0 . n A 1 376 GLY 376 513 513 GLY GLY 0 . n A 1 377 ARG 377 514 514 ARG ARG 0 . n A 1 378 ASP 378 515 515 ASP ASP 0 . n A 1 379 SER 379 516 516 SER SER 0 . n A 1 380 LEU 380 517 517 LEU LEU 0 . n A 1 381 VAL 381 518 518 VAL VAL 0 . n A 1 382 ASN 382 519 519 ASN ASN 0 . n A 1 383 PRO 383 520 520 PRO PRO 0 . n A 1 384 GLY 384 521 521 GLY GLY 0 . n A 1 385 PRO 385 522 522 PRO PRO 0 . n A 1 386 ALA 386 523 523 ALA ALA 0 . n A 1 387 MET 387 524 524 MET MET 0 . n A 1 388 ALA 388 525 525 ALA ALA 0 . n A 1 389 SER 389 526 526 SER SER 0 . n A 1 390 HIS 390 527 527 HIS HIS 0 . n A 1 391 LYS 391 528 528 LYS LYS 0 . n A 1 392 ASP 392 529 529 ASP ASP 0 . n A 1 393 ASP 393 530 530 ASP ASP 0 . n A 1 394 GLU 394 531 531 GLU GLU 0 . n A 1 395 GLU 395 532 532 GLU GLU 0 . n A 1 396 LYS 396 533 533 LYS LYS 0 . n A 1 397 PHE 397 534 534 PHE PHE 0 . n A 1 398 PHE 398 535 535 PHE PHE 0 . n A 1 399 PRO 399 536 536 PRO PRO 0 . n A 1 400 MET 400 537 537 MET MET 0 . n A 1 401 HIS 401 538 538 HIS HIS 0 . n A 1 402 GLY 402 539 539 GLY GLY 0 . n A 1 403 ASN 403 540 540 ASN ASN 0 . n A 1 404 LEU 404 541 541 LEU LEU 0 . n A 1 405 ILE 405 542 542 ILE ILE 0 . n A 1 406 PHE 406 543 543 PHE PHE 0 . n A 1 407 GLY 407 544 544 GLY GLY 0 . n A 1 408 LYS 408 545 545 LYS LYS 0 . n A 1 409 GLU 409 546 546 GLU GLU 0 . n A 1 410 GLY 410 547 547 GLY GLY 0 . n A 1 411 THR 411 548 548 THR THR 0 . n A 1 412 THR 412 549 549 THR THR 0 . n A 1 413 ALA 413 550 550 ALA ALA 0 . n A 1 414 SER 414 551 551 SER SER 0 . n A 1 415 ASN 415 552 552 ASN ASN 0 . n A 1 416 ALA 416 553 553 ALA ALA 0 . n A 1 417 GLU 417 554 554 GLU GLU 0 . n A 1 418 LEU 418 555 555 LEU LEU 0 . n A 1 419 ASP 419 556 556 ASP ASP 0 . n A 1 420 ASN 420 557 557 ASN ASN 0 . n A 1 421 VAL 421 558 558 VAL VAL 0 . n A 1 422 MET 422 559 559 MET MET 0 . n A 1 423 ILE 423 560 560 ILE ILE 0 . n A 1 424 THR 424 561 561 THR THR 0 . n A 1 425 ASP 425 562 562 ASP ASP 0 . n A 1 426 GLU 426 563 563 GLU GLU 0 . n A 1 427 GLU 427 564 564 GLU GLU 0 . n A 1 428 GLU 428 565 565 GLU GLU 0 . n A 1 429 ILE 429 566 566 ILE ILE 0 . n A 1 430 ARG 430 567 567 ARG ARG 0 . n A 1 431 THR 431 568 568 THR THR 0 . n A 1 432 THR 432 569 569 THR THR 0 . n A 1 433 ASN 433 570 570 ASN ASN 0 . n A 1 434 PRO 434 571 571 PRO PRO 0 . n A 1 435 VAL 435 572 572 VAL VAL 0 . n A 1 436 ALA 436 573 573 ALA ALA 0 . n A 1 437 THR 437 574 574 THR THR 0 . n A 1 438 GLU 438 575 575 GLU GLU 0 . n A 1 439 GLN 439 576 576 GLN GLN 0 . n A 1 440 TYR 440 577 577 TYR TYR 0 . n A 1 441 GLY 441 578 578 GLY GLY 0 . n A 1 442 THR 442 579 579 THR THR 0 . n A 1 443 VAL 443 580 580 VAL VAL 0 . n A 1 444 ALA 444 581 581 ALA ALA 0 . n A 1 445 ASN 445 582 582 ASN ASN 0 . n A 1 446 ASN 446 583 583 ASN ASN 0 . n A 1 447 LEU 447 584 584 LEU LEU 0 . n A 1 448 GLN 448 585 585 GLN GLN 0 . n A 1 449 SER 449 586 586 SER SER 0 . n A 1 450 SER 450 587 587 SER SER 0 . n A 1 451 ASN 451 588 588 ASN ASN 0 . n A 1 452 THR 452 589 589 THR THR 0 . n A 1 453 ALA 453 590 590 ALA ALA 0 . n A 1 454 PRO 454 591 591 PRO PRO 0 . n A 1 455 THR 455 592 592 THR THR 0 . n A 1 456 THR 456 593 593 THR THR 0 . n A 1 457 ARG 457 594 594 ARG ARG 0 . n A 1 458 THR 458 595 595 THR THR 0 . n A 1 459 VAL 459 596 596 VAL VAL 0 . n A 1 460 ASN 460 597 597 ASN ASN 0 . n A 1 461 ASP 461 598 598 ASP ASP 0 . n A 1 462 GLN 462 599 599 GLN GLN 0 . n A 1 463 GLY 463 600 600 GLY GLY 0 . n A 1 464 ALA 464 601 601 ALA ALA 0 . n A 1 465 LEU 465 602 602 LEU LEU 0 . n A 1 466 PRO 466 603 603 PRO PRO 0 . n A 1 467 GLY 467 604 604 GLY GLY 0 . n A 1 468 MET 468 605 605 MET MET 0 . n A 1 469 VAL 469 606 606 VAL VAL 0 . n A 1 470 TRP 470 607 607 TRP TRP 0 . n A 1 471 GLN 471 608 608 GLN GLN 0 . n A 1 472 ASP 472 609 609 ASP ASP 0 . n A 1 473 ARG 473 610 610 ARG ARG 0 . n A 1 474 ASP 474 611 611 ASP ASP 0 . n A 1 475 VAL 475 612 612 VAL VAL 0 . n A 1 476 TYR 476 613 613 TYR TYR 0 . n A 1 477 LEU 477 614 614 LEU LEU 0 . n A 1 478 GLN 478 615 615 GLN GLN 0 . n A 1 479 GLY 479 616 616 GLY GLY 0 . n A 1 480 PRO 480 617 617 PRO PRO 0 . n A 1 481 ILE 481 618 618 ILE ILE 0 . n A 1 482 TRP 482 619 619 TRP TRP 0 . n A 1 483 ALA 483 620 620 ALA ALA 0 . n A 1 484 LYS 484 621 621 LYS LYS 0 . n A 1 485 ILE 485 622 622 ILE ILE 0 . n A 1 486 PRO 486 623 623 PRO PRO 0 . n A 1 487 HIS 487 624 624 HIS HIS 0 . n A 1 488 THR 488 625 625 THR THR 0 . n A 1 489 ASP 489 626 626 ASP ASP 0 . n A 1 490 GLY 490 627 627 GLY GLY 0 . n A 1 491 HIS 491 628 628 HIS HIS 0 . n A 1 492 PHE 492 629 629 PHE PHE 0 . n A 1 493 HIS 493 630 630 HIS HIS 0 . n A 1 494 PRO 494 631 631 PRO PRO 0 . n A 1 495 SER 495 632 632 SER SER 0 . n A 1 496 PRO 496 633 633 PRO PRO 0 . n A 1 497 LEU 497 634 634 LEU LEU 0 . n A 1 498 MET 498 635 635 MET MET 0 . n A 1 499 GLY 499 636 636 GLY GLY 0 . n A 1 500 GLY 500 637 637 GLY GLY 0 . n A 1 501 PHE 501 638 638 PHE PHE 0 . n A 1 502 GLY 502 639 639 GLY GLY 0 . n A 1 503 LEU 503 640 640 LEU LEU 0 . n A 1 504 LYS 504 641 641 LYS LYS 0 . n A 1 505 HIS 505 642 642 HIS HIS 0 . n A 1 506 PRO 506 643 643 PRO PRO 0 . n A 1 507 PRO 507 644 644 PRO PRO 0 . n A 1 508 PRO 508 645 645 PRO PRO 0 . n A 1 509 GLN 509 646 646 GLN GLN 0 . n A 1 510 ILE 510 647 647 ILE ILE 0 . n A 1 511 MET 511 648 648 MET MET 0 . n A 1 512 ILE 512 649 649 ILE ILE 0 . n A 1 513 LYS 513 650 650 LYS LYS 0 . n A 1 514 ASN 514 651 651 ASN ASN 0 . n A 1 515 THR 515 652 652 THR THR 0 . n A 1 516 PRO 516 653 653 PRO PRO 0 . n A 1 517 VAL 517 654 654 VAL VAL 0 . n A 1 518 PRO 518 655 655 PRO PRO 0 . n A 1 519 ALA 519 656 656 ALA ALA 0 . n A 1 520 ASN 520 657 657 ASN ASN 0 . n A 1 521 PRO 521 658 658 PRO PRO 0 . n A 1 522 PRO 522 659 659 PRO PRO 0 . n A 1 523 THR 523 660 660 THR THR 0 . n A 1 524 THR 524 661 661 THR THR 0 . n A 1 525 PHE 525 662 662 PHE PHE 0 . n A 1 526 SER 526 663 663 SER SER 0 . n A 1 527 PRO 527 664 664 PRO PRO 0 . n A 1 528 ALA 528 665 665 ALA ALA 0 . n A 1 529 LYS 529 666 666 LYS LYS 0 . n A 1 530 PHE 530 667 667 PHE PHE 0 . n A 1 531 ALA 531 668 668 ALA ALA 0 . n A 1 532 SER 532 669 669 SER SER 0 . n A 1 533 PHE 533 670 670 PHE PHE 0 . n A 1 534 ILE 534 671 671 ILE ILE 0 . n A 1 535 THR 535 672 672 THR THR 0 . n A 1 536 GLN 536 673 673 GLN GLN 0 . n A 1 537 TYR 537 674 674 TYR TYR 0 . n A 1 538 SER 538 675 675 SER SER 0 . n A 1 539 THR 539 676 676 THR THR 0 . n A 1 540 GLY 540 677 677 GLY GLY 0 . n A 1 541 GLN 541 678 678 GLN GLN 0 . n A 1 542 VAL 542 679 679 VAL VAL 0 . n A 1 543 SER 543 680 680 SER SER 0 . n A 1 544 VAL 544 681 681 VAL VAL 0 . n A 1 545 GLU 545 682 682 GLU GLU 0 . n A 1 546 ILE 546 683 683 ILE ILE 0 . n A 1 547 GLU 547 684 684 GLU GLU 0 . n A 1 548 TRP 548 685 685 TRP TRP 0 . n A 1 549 GLU 549 686 686 GLU GLU 0 . n A 1 550 LEU 550 687 687 LEU LEU 0 . n A 1 551 GLN 551 688 688 GLN GLN 0 . n A 1 552 LYS 552 689 689 LYS LYS 0 . n A 1 553 GLU 553 690 690 GLU GLU 0 . n A 1 554 ASN 554 691 691 ASN ASN 0 . n A 1 555 SER 555 692 692 SER SER 0 . n A 1 556 LYS 556 693 693 LYS LYS 0 . n A 1 557 ARG 557 694 694 ARG ARG 0 . n A 1 558 TRP 558 695 695 TRP TRP 0 . n A 1 559 ASN 559 696 696 ASN ASN 0 . n A 1 560 PRO 560 697 697 PRO PRO 0 . n A 1 561 GLU 561 698 698 GLU GLU 0 . n A 1 562 ILE 562 699 699 ILE ILE 0 . n A 1 563 GLN 563 700 700 GLN GLN 0 . n A 1 564 TYR 564 701 701 TYR TYR 0 . n A 1 565 THR 565 702 702 THR THR 0 . n A 1 566 SER 566 703 703 SER SER 0 . n A 1 567 ASN 567 704 704 ASN ASN 0 . n A 1 568 TYR 568 705 705 TYR TYR 0 . n A 1 569 ASN 569 706 706 ASN ASN 0 . n A 1 570 LYS 570 707 707 LYS LYS 0 . n A 1 571 SER 571 708 708 SER SER 0 . n A 1 572 VAL 572 709 709 VAL VAL 0 . n A 1 573 ASN 573 710 710 ASN ASN 0 . n A 1 574 VAL 574 711 711 VAL VAL 0 . n A 1 575 ASP 575 712 712 ASP ASP 0 . n A 1 576 PHE 576 713 713 PHE PHE 0 . n A 1 577 THR 577 714 714 THR THR 0 . n A 1 578 VAL 578 715 715 VAL VAL 0 . n A 1 579 ASP 579 716 716 ASP ASP 0 . n A 1 580 THR 580 717 717 THR THR 0 . n A 1 581 ASN 581 718 718 ASN ASN 0 . n A 1 582 GLY 582 719 719 GLY GLY 0 . n A 1 583 VAL 583 720 720 VAL VAL 0 . n A 1 584 TYR 584 721 721 TYR TYR 0 . n A 1 585 SER 585 722 722 SER SER 0 . n A 1 586 GLU 586 723 723 GLU GLU 0 . n A 1 587 PRO 587 724 724 PRO PRO 0 . n A 1 588 ARG 588 725 725 ARG ARG 0 . n A 1 589 PRO 589 726 726 PRO PRO 0 . n A 1 590 ILE 590 727 727 ILE ILE 0 . n A 1 591 GLY 591 728 728 GLY GLY 0 . n A 1 592 THR 592 729 729 THR THR 0 . n A 1 593 ARG 593 730 730 ARG ARG 0 . n A 1 594 TYR 594 731 731 TYR TYR 0 . n A 1 595 LEU 595 732 732 LEU LEU 0 . n A 1 596 THR 596 733 733 THR THR 0 . n A 1 597 ARG 597 734 734 ARG ARG 0 . n A 1 598 ASN 598 735 735 ASN ASN 0 . n A 1 599 LEU 599 736 736 LEU LEU 0 . n # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version 1.20.1_4487: _software.pdbx_ordinal 1 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8A9U _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8A9U _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8A9U _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8A9U _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.10 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.003 ? 25668 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.529 ? 35040 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 4.651 ? 3396 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.040 ? 3642 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.004 ? 4668 ? f_plane_restr ? ? # _struct.entry_id 8A9U _struct.title 'Full AAV3B-VP1KO virion' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8A9U _struct_keywords.text 'Adeno-Associated Virus, AAV, AAV3B, AAV serotype 3B, Full, VP1KO, VIRUS' _struct_keywords.pdbx_keywords VIRUS # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O56139_9VIRU _struct_ref.pdbx_db_accession O56139 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TAPGKKRPVDQSPQEPDSSSGVGKSGKQPARKRLNFGQTGDSESVPDPQPLGEPPAAPTSLGSNTMASGGGAPMADNNEG ADGVGNSSGNWHCDSQWLGDRVITTSTRTWALPTYNNHLYKQISSQSGASNDNHYFGYSTPWGYFDFNRFHCHFSPRDWQ RLINNNWGFRPKKLSFKLFNIQVKEVTQNDGTTTIANNLTSTVQVFTDSEYQLPYVLGSAHQGCLPPFPADVFMVPQYGY LTLNNGSQAVGRSSFYCLEYFPSQMLRTGNNFQFSYTFEDVPFHSSYAHSQSLDRLMNPLIDQYLYYLNRTQGTTSGTTN QSRLLFSQAGPQSMSLQARNWLPGPCYRQQRLSKTANDNNNSNFPWTAASKYHLNGRDSLVNPGPAMASHKDDEEKFFPM HGNLIFGKEGTTASNAELDNVMITDEEEIRTTNPVATEQYGTVANNLQSSNTAPTTRTVNDQGALPGMVWQDRDVYLQGP IWAKIPHTDGHFHPSPLMGGFGLKHPPPQIMIKNTPVPANPPTTFSPAKFASFITQYSTGQVSVEIEWELQKENSKRWNP EIQYTSNYNKSVNVDFTVDTNGVYSEPRPIGTRYLTRNL ; _struct_ref.pdbx_align_begin 138 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8A9U _struct_ref_seq.pdbx_strand_id 0 _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 599 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O56139 _struct_ref_seq.db_align_beg 138 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 736 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 138 _struct_ref_seq.pdbx_auth_seq_align_end 736 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression ;1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60 ; _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.000000 0.000000 0.000000 0.00000 0.000000 1.000000 0.000000 0.00000 0.000000 0.000000 1.000000 0.00000 2 'point symmetry operation' ? ? 0.502083 -0.310276 -0.807243 377.09971 -0.308458 0.807783 -0.502335 234.43374 0.807940 0.501214 0.309867 -144.59132 3 'point symmetry operation' ? ? 0.503163 0.310885 0.806336 -144.70053 0.307690 0.807462 -0.503321 90.93928 -0.807561 0.501354 0.310629 232.26243 4 'point symmetry operation' ? ? 0.501448 0.311775 -0.807060 231.59990 0.305732 0.808779 0.502399 -144.17006 0.809369 -0.498671 0.310241 88.21095 5 'point symmetry operation' ? ? 0.496883 -0.310493 0.810371 0.68476 -0.312286 0.807274 0.500786 0.95028 -0.809682 -0.501899 0.304158 468.91534 6 'point symmetry operation' ? ? 0.810897 -0.496570 0.309619 87.39476 -0.498949 -0.310235 0.809199 233.53177 -0.305770 -0.810662 -0.499332 610.60523 7 'point symmetry operation' ? ? 0.306662 0.809939 -0.499958 89.36391 0.810939 -0.497335 -0.308279 231.93368 -0.498333 -0.310898 -0.809325 611.38189 8 'point symmetry operation' ? ? 0.000174 0.999992 -0.004104 1.29356 0.003944 -0.004105 -0.999984 467.32268 -0.999992 0.000158 -0.003945 467.97687 9 'point symmetry operation' ? ? 0.306142 0.807889 0.503579 -144.36309 -0.809214 0.499473 -0.309353 377.93063 -0.501447 -0.312797 0.806665 235.57745 10 'point symmetry operation' ? ? 0.807348 0.501163 0.311488 -145.07743 -0.502153 0.306301 0.808716 90.43460 0.309890 -0.809330 0.498952 233.60343 11 'point symmetry operation' ? ? 0.810251 -0.496968 0.310670 87.44416 0.501400 0.313312 -0.806494 231.17618 0.303465 0.809233 0.503041 -144.18612 12 'point symmetry operation' ? ? 0.002440 -0.002783 -0.999993 467.13307 0.999997 -0.000158 0.002441 -0.75597 -0.000164 -0.999996 0.002782 465.93052 13 'point symmetry operation' ? ? 0.311794 -0.805564 -0.503836 466.44756 0.806625 0.504655 -0.307701 -1.36597 0.502136 -0.310467 0.807137 0.59347 14 'point symmetry operation' ? ? 0.310155 -0.810692 0.496571 234.59818 0.807082 0.500572 0.313124 -145.28412 -0.502417 0.303656 0.809550 91.14680 15 'point symmetry operation' ? ? -0.000041 -0.999961 -0.008853 469.54105 0.003044 -0.008853 0.999956 2.04137 -0.999995 0.000014 0.003044 465.89418 16 'point symmetry operation' ? ? 0.315172 -0.804357 -0.503662 465.30475 -0.807387 -0.506185 0.303155 470.07327 -0.498791 0.311105 -0.808963 465.99616 17 'point symmetry operation' ? ? 0.496633 0.306309 0.812115 -143.69398 -0.310724 -0.810903 0.495869 379.67631 0.810436 -0.498609 -0.307544 232.08549 18 'point symmetry operation' ? ? 0.311384 0.806000 -0.503392 90.63230 -0.805822 0.504727 0.309680 231.20571 0.503678 0.309215 0.806656 -144.30714 19 'point symmetry operation' ? ? -0.308777 -0.809012 -0.500157 610.95225 0.808514 -0.500222 0.309973 88.89799 -0.500961 -0.308671 0.808554 233.64861 20 'point symmetry operation' ? ? -0.499542 -0.309715 -0.809033 611.18303 -0.305314 -0.811038 0.499000 377.87184 -0.810704 0.496281 0.310587 234.32831 21 'point symmetry operation' ? ? -0.003077 -0.000842 -0.999995 467.68761 -0.999993 -0.002298 0.003079 466.64248 -0.002301 0.999997 -0.000835 0.73710 22 'point symmetry operation' ? ? -0.305152 -0.808234 -0.503627 611.23139 -0.809220 0.498877 -0.310299 378.52114 0.502042 0.312857 -0.806272 230.94430 23 'point symmetry operation' ? ? 0.313408 -0.810536 0.494779 234.54875 -0.805219 -0.503023 -0.313992 612.70025 0.503387 -0.299998 -0.810310 374.65388 24 'point symmetry operation' ? ? 0.497287 -0.312506 0.809349 1.42418 0.315598 -0.803805 -0.504278 465.14774 0.808148 0.506200 -0.301095 -4.10855 25 'point symmetry operation' ? ? 0.000363 1.000000 -0.000056 -0.06090 -0.001734 0.000056 0.999998 0.42423 0.999998 -0.000363 0.001734 -0.42275 26 'point symmetry operation' ? ? 0.304244 0.807509 0.505337 -144.42630 0.810263 -0.498319 0.308466 88.58272 0.500908 0.315607 -0.805906 230.29271 27 'point symmetry operation' ? ? -0.310097 0.810045 0.497661 0.68867 0.809601 0.499416 -0.308432 -0.14191 -0.498384 0.307262 -0.810681 467.51437 28 'point symmetry operation' ? ? -0.501479 0.307049 -0.808851 467.65150 0.310821 -0.808548 -0.499640 466.16569 -0.807409 -0.501967 0.310032 466.78524 29 'point symmetry operation' ? ? 0.999994 -0.000461 0.003495 -0.90940 -0.000411 -0.999898 -0.014306 471.28566 0.003501 0.014304 -0.999892 461.82546 30 'point symmetry operation' ? ? 0.809280 -0.495009 -0.316277 234.09180 0.500774 0.299921 0.811956 -142.60130 -0.307068 -0.815483 0.490608 382.10917 31 'point symmetry operation' ? ? 0.495790 -0.313070 -0.810049 379.93686 0.313006 -0.805651 0.502945 230.78598 -0.810074 -0.502905 -0.301441 609.81675 32 'point symmetry operation' ? ? 0.502117 0.312279 -0.806449 231.34201 -0.305217 -0.808526 -0.503119 611.13963 -0.809149 0.498766 -0.310661 378.64575 33 'point symmetry operation' ? ? 0.808514 0.501779 -0.307446 -0.95177 -0.499384 0.308638 -0.809542 466.88523 -0.311322 0.808060 0.500118 0.78117 34 'point symmetry operation' ? ? 0.806554 0.502943 -0.310675 0.19970 0.503514 -0.309096 0.806804 0.04424 0.309748 -0.807160 -0.502542 466.87870 35 'point symmetry operation' ? ? 0.808277 0.501155 0.309084 -144.46884 0.500274 -0.307694 -0.809352 377.41470 -0.310507 0.808807 -0.499416 233.57789 36 'point symmetry operation' ? ? 0.813322 -0.491865 -0.310766 230.56837 -0.496274 -0.307704 -0.811807 610.70138 0.303676 0.814486 -0.494362 86.83767 37 'point symmetry operation' ? ? -0.309591 0.807401 -0.502252 234.74720 -0.805469 -0.503398 -0.312746 612.50830 -0.505344 0.307725 0.806184 91.35735 38 'point symmetry operation' ? ? -0.500124 0.305470 -0.810286 468.23743 -0.314536 0.807727 0.498643 1.91888 0.806811 0.504247 -0.307882 -1.08722 39 'point symmetry operation' ? ? -0.306858 0.807501 -0.503766 234.62679 0.809626 0.499727 0.307861 -143.94219 0.500343 -0.313392 -0.807120 378.29677 40 'point symmetry operation' ? ? -0.497794 -0.308782 -0.810466 610.95667 0.306755 0.811389 -0.497544 88.18556 0.811235 -0.496289 -0.309184 231.84934 41 'point symmetry operation' ? ? 0.004847 -0.999974 -0.005367 467.38778 0.003445 0.005384 -0.999980 464.52163 0.999982 0.004829 0.003471 -2.52386 42 'point symmetry operation' ? ? -0.005014 -0.008194 0.999954 3.38466 0.999974 0.005110 0.005055 -3.10174 -0.005151 0.999953 0.008168 -1.48403 43 'point symmetry operation' ? ? -0.501576 -0.316028 0.805325 236.95090 0.302897 0.807815 0.505657 -144.30465 -0.810355 0.497556 -0.309457 378.85667 44 'point symmetry operation' ? ? -0.309322 -0.811852 0.495193 379.90092 -0.811048 0.497105 0.308364 234.90070 -0.496509 -0.306242 -0.812216 610.60191 45 'point symmetry operation' ? ? -0.504847 0.310586 0.805398 90.77621 -0.307241 0.807274 -0.503896 234.74742 -0.806680 -0.501842 -0.312125 612.08673 46 'point symmetry operation' ? ? -0.002294 -0.007024 0.999973 2.57843 -0.999993 -0.002974 -0.002315 468.51624 0.002990 -0.999971 -0.007017 468.28837 47 'point symmetry operation' ? ? -0.807903 0.500423 -0.311238 378.06232 0.502660 0.309486 -0.807187 232.18738 -0.307611 -0.808576 -0.501578 611.08581 48 'point symmetry operation' ? ? -0.809117 0.499829 0.309033 233.49084 -0.498812 -0.306147 -0.810839 610.56304 -0.310671 -0.810213 0.497029 379.33545 49 'point symmetry operation' ? ? -0.309157 0.809517 0.499104 0.08856 -0.809372 -0.499525 0.308855 466.80805 0.499339 -0.308475 0.809632 -0.14859 50 'point symmetry operation' ? ? -0.808353 -0.501432 -0.308433 611.14429 0.499729 -0.307526 -0.809752 377.44774 0.311185 -0.808699 0.499170 233.18518 51 'point symmetry operation' ? ? -0.303759 -0.815895 0.491981 381.01230 0.815238 -0.489821 -0.308969 228.93978 0.493069 0.307230 0.813936 -143.80499 52 'point symmetry operation' ? ? -0.809916 -0.499652 0.307221 467.33719 0.498410 -0.310120 0.809576 0.45345 -0.309231 0.808810 0.500203 0.20955 53 'point symmetry operation' ? ? -0.808573 -0.501351 -0.307990 611.05482 -0.499556 0.308361 0.809541 89.17442 -0.310892 0.808431 -0.499785 233.90047 54 'point symmetry operation' ? ? -0.999997 -0.002178 0.001014 467.25782 0.002177 -0.999997 -0.001398 466.91649 0.001017 -0.001396 0.999999 0.14595 55 'point symmetry operation' ? ? -0.808586 0.499004 -0.311743 378.66943 -0.503431 -0.312515 0.805538 236.11326 0.304542 0.808288 0.503909 -144.37184 56 'point symmetry operation' ? ? -0.500814 0.306660 0.809410 89.97912 0.311263 -0.808769 0.499008 233.10582 0.807651 0.501849 0.309591 -144.65654 57 'point symmetry operation' ? ? -0.809889 0.500054 0.306636 234.31172 0.497464 0.308527 0.810766 -144.20149 0.310821 0.809171 -0.498631 88.36391 58 'point symmetry operation' ? ? -0.806441 -0.504717 0.308079 468.04011 -0.501363 0.307396 -0.808791 467.46722 0.313509 -0.806702 -0.500943 465.61283 59 'point symmetry operation' ? ? -0.501107 -0.311712 0.807296 235.00364 -0.305232 -0.809256 -0.501933 610.87208 0.809768 -0.497935 0.310379 87.83519 60 'point symmetry operation' ? ? -0.999995 -0.001212 -0.003054 468.16521 -0.001229 0.999984 0.005578 -1.41268 0.003047 0.005582 -0.999980 464.48953 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG A 149 ? HIS A 153 ? ARG 0 286 HIS 0 290 5 ? 5 HELX_P HELX_P2 AA2 SER A 155 ? ASN A 164 ? SER 0 292 ASN 0 301 1 ? 10 HELX_P HELX_P3 AA3 CYS A 257 ? PHE A 261 ? CYS 0 394 PHE 0 398 5 ? 5 HELX_P HELX_P4 AA4 THR A 355 ? ASN A 359 ? THR 0 492 ASN 0 496 5 ? 5 HELX_P HELX_P5 AA5 GLU A 417 ? ASP A 419 ? GLU 0 554 ASP 0 556 5 ? 3 HELX_P HELX_P6 AA6 GLU A 426 ? ARG A 430 ? GLU 0 563 ARG 0 567 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 152 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 224 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id 0 _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 289 _struct_conn.ptnr2_auth_asym_id 0 _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 361 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.041 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CYS _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 152 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 224 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id CYS _pdbx_modification_feature.auth_asym_id 0 _pdbx_modification_feature.auth_seq_id 289 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id 0 _pdbx_modification_feature.modified_residue_auth_seq_id 361 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom SG _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id . _pdbx_modification_feature.ref_pcm_id . _pdbx_modification_feature.ref_comp_id . _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 5 ? AA3 ? 3 ? AA4 ? 5 ? AA5 ? 2 ? AA6 ? 2 ? AA7 ? 2 ? AA8 ? 2 ? AA9 ? 2 ? AB1 ? 2 ? AB2 ? 2 ? AB3 ? 2 ? AB4 ? 2 ? AB5 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel AA5 1 2 ? anti-parallel AA6 1 2 ? parallel AA7 1 2 ? anti-parallel AA8 1 2 ? parallel AA9 1 2 ? anti-parallel AB1 1 2 ? anti-parallel AB2 1 2 ? anti-parallel AB3 1 2 ? anti-parallel AB4 1 2 ? anti-parallel AB5 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 95 ? TRP A 97 ? SER 0 232 TRP 0 234 AA1 2 ARG A 101 ? LEU A 112 ? ARG 0 238 LEU 0 249 AA1 3 GLN A 536 ? LYS A 552 ? GLN 0 673 LYS 0 689 AA1 4 ASN A 166 ? GLN A 188 ? ASN 0 303 GLN 0 325 AA1 5 VAL A 232 ? MET A 234 ? VAL 0 369 MET 0 371 AA2 1 THR A 193 ? ASN A 197 ? THR 0 330 ASN 0 334 AA2 2 ASN A 166 ? GLN A 188 ? ASN 0 303 GLN 0 325 AA2 3 GLN A 536 ? LYS A 552 ? GLN 0 673 LYS 0 689 AA2 4 ARG A 101 ? LEU A 112 ? ARG 0 238 LEU 0 249 AA2 5 PHE A 272 ? THR A 277 ? PHE 0 409 THR 0 414 AA3 1 LYS A 121 ? SER A 124 ? LYS 0 258 SER 0 261 AA3 2 PHE A 136 ? TYR A 144 ? PHE 0 273 TYR 0 281 AA3 3 GLN A 237 ? THR A 242 ? GLN 0 374 THR 0 379 AA4 1 LYS A 121 ? SER A 124 ? LYS 0 258 SER 0 261 AA4 2 PHE A 136 ? TYR A 144 ? PHE 0 273 TYR 0 281 AA4 3 ILE A 510 ? ASN A 514 ? ILE 0 647 ASN 0 651 AA4 4 VAL A 203 ? THR A 207 ? VAL 0 340 THR 0 344 AA4 5 GLN A 264 ? LEU A 266 ? GLN 0 401 LEU 0 403 AA5 1 ASN A 244 ? ASN A 245 ? ASN 0 381 ASN 0 382 AA5 2 GLN A 248 ? ALA A 249 ? GLN 0 385 ALA 0 386 AA6 1 TYR A 287 ? HIS A 289 ? TYR 0 424 HIS 0 426 AA6 2 LEU A 595 ? ARG A 597 ? LEU 0 732 ARG 0 734 AA7 1 TYR A 306 ? ARG A 310 ? TYR 0 443 ARG 0 447 AA7 2 LEU A 325 ? GLN A 328 ? LEU 0 462 GLN 0 465 AA8 1 LEU A 342 ? PRO A 343 ? LEU 0 479 PRO 0 480 AA8 2 MET A 468 ? VAL A 469 ? MET 0 605 VAL 0 606 AA9 1 CYS A 346 ? TYR A 347 ? CYS 0 483 TYR 0 484 AA9 2 ASP A 461 ? GLN A 462 ? ASP 0 598 GLN 0 599 AB1 1 ARG A 351 ? SER A 353 ? ARG 0 488 SER 0 490 AB1 2 PHE A 397 ? PRO A 399 ? PHE 0 534 PRO 0 536 AB2 1 LYS A 371 ? LEU A 374 ? LYS 0 508 LEU 0 511 AB2 2 ARG A 377 ? LEU A 380 ? ARG 0 514 LEU 0 517 AB3 1 ILE A 405 ? GLY A 407 ? ILE 0 542 GLY 0 544 AB3 2 VAL A 421 ? ILE A 423 ? VAL 0 558 ILE 0 560 AB4 1 GLY A 441 ? ALA A 444 ? GLY 0 578 ALA 0 581 AB4 2 THR A 456 ? VAL A 459 ? THR 0 593 VAL 0 596 AB5 1 TRP A 482 ? LYS A 484 ? TRP 0 619 LYS 0 621 AB5 2 PHE A 501 ? LEU A 503 ? PHE 0 638 LEU 0 640 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLN A 96 ? N GLN 0 233 O ILE A 103 ? O ILE 0 240 AA1 2 3 N VAL A 102 ? N VAL 0 239 O TRP A 548 ? O TRP 0 685 AA1 3 4 O GLU A 547 ? O GLU 0 684 N LYS A 172 ? N LYS 0 309 AA2 1 2 O THR A 194 ? O THR 0 331 N THR A 187 ? N THR 0 324 AA2 2 3 N LYS A 172 ? N LYS 0 309 O GLU A 547 ? O GLU 0 684 AA2 3 4 O TRP A 548 ? O TRP 0 685 N VAL A 102 ? N VAL 0 239 AA3 1 2 N ILE A 123 ? N ILE 0 260 O GLY A 137 ? O GLY 0 274 AA3 2 3 N TRP A 142 ? N TRP 0 279 O TYR A 238 ? O TYR 0 375 AA4 1 2 N ILE A 123 ? N ILE 0 260 O GLY A 137 ? O GLY 0 274 AA4 2 3 N GLY A 143 ? N GLY 0 280 O ILE A 512 ? O ILE 0 649 AA4 3 4 O MET A 511 ? O MET 0 648 N PHE A 206 ? N PHE 0 343 AA4 4 5 N VAL A 205 ? N VAL 0 342 O GLN A 264 ? O GLN 0 401 AA5 1 2 N ASN A 245 ? N ASN 0 382 O GLN A 248 ? O GLN 0 385 AA6 1 2 N ALA A 288 ? N ALA 0 425 O LEU A 595 ? O LEU 0 732 AA7 1 2 N TYR A 307 ? N TYR 0 444 O SER A 327 ? O SER 0 464 AA8 1 2 N LEU A 342 ? N LEU 0 479 O VAL A 469 ? O VAL 0 606 AA9 1 2 N CYS A 346 ? N CYS 0 483 O GLN A 462 ? O GLN 0 599 AB1 1 2 N LEU A 352 ? N LEU 0 489 O PHE A 398 ? O PHE 0 535 AB2 1 2 N LEU A 374 ? N LEU 0 511 O ARG A 377 ? O ARG 0 514 AB3 1 2 N PHE A 406 ? N PHE 0 543 O MET A 422 ? O MET 0 559 AB4 1 2 N GLY A 441 ? N GLY 0 578 O VAL A 459 ? O VAL 0 596 AB5 1 2 N ALA A 483 ? N ALA 0 620 O LEU A 503 ? O LEU 0 640 # _pdbx_entry_details.entry_id 8A9U _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE2 0 GLU 563 ? ? OH 0 TYR 613 ? ? 2.05 2 1 ND2 0 ASN 446 ? ? OG 0 SER 464 ? ? 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS 0 229 ? ? -96.32 -63.92 2 1 CYS 0 230 ? ? 47.33 -155.35 3 1 ASP 0 231 ? ? 67.60 177.32 4 1 GLN 0 263 ? ? 177.65 169.93 5 1 PHE 0 284 ? ? -141.64 33.09 6 1 ASN 0 285 ? ? -91.01 53.16 7 1 ASP 0 327 ? ? -162.27 -165.46 8 1 LEU 0 362 ? ? -57.15 108.34 9 1 PRO 0 363 ? ? -47.45 151.31 10 1 SER 0 423 ? ? -92.20 54.33 11 1 ARG 0 460 ? ? -161.79 115.73 12 1 TRP 0 503 ? ? 74.46 -7.66 13 1 GLU 0 531 ? ? -93.63 -64.60 14 1 GLU 0 532 ? ? 55.08 9.22 15 1 PRO 0 631 ? ? -69.38 6.86 # _em_3d_fitting.entry_id 8A9U _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol 'RIGID BODY FIT' _em_3d_fitting.ref_space REAL _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.id 1 _em_3d_fitting_list.details ? _em_3d_fitting_list.pdb_chain_id ? _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.pdb_entry_id 3KIC _em_3d_fitting_list.initial_refinement_model_id 1 _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code 3KIC # _em_3d_reconstruction.entry_id 8A9U _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 340947 _em_3d_reconstruction.resolution 3.1 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7.4 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details 'For the recombinant production of the VP1KO virion, we used the Pro10TM cell line.' _em_entity_assembly.name 'Adeno-associated virus - 3' _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type VIRUS _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_imaging.id 1 _em_imaging.entry_id 8A9U _em_imaging.accelerating_voltage 200 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'TFS GLACIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max 2500 _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_magnification 92000 _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.method ? _em_sample_support.film_material ? # _em_virus_entity.entity_assembly_id 1 _em_virus_entity.empty YES _em_virus_entity.enveloped NO _em_virus_entity.virus_isolate SEROTYPE _em_virus_entity.virus_type VIRION _em_virus_entity.id 1 _em_virus_entity.virus_host_category ? _em_virus_entity.details ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 283 _em_vitrification.cryogen_name ETHANE _em_vitrification.details ;Parameters: 2 seconds of blot time, -2 offset value, after 45 seconds of incubation. Quantifoil Cu 300-mesh R1.2/1.3 holey-carbon grids with an extra layer of carbon on top added in-house. ; _em_vitrification.humidity 85 _em_vitrification.instrument 'FEI VITROBOT MARK III' _em_vitrification.entry_id 8A9U _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 8A9U _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8A9U _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry I # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 0 THR 138 ? A THR 1 2 1 Y 1 0 ALA 139 ? A ALA 2 3 1 Y 1 0 PRO 140 ? A PRO 3 4 1 Y 1 0 GLY 141 ? A GLY 4 5 1 Y 1 0 LYS 142 ? A LYS 5 6 1 Y 1 0 LYS 143 ? A LYS 6 7 1 Y 1 0 ARG 144 ? A ARG 7 8 1 Y 1 0 PRO 145 ? A PRO 8 9 1 Y 1 0 VAL 146 ? A VAL 9 10 1 Y 1 0 ASP 147 ? A ASP 10 11 1 Y 1 0 GLN 148 ? A GLN 11 12 1 Y 1 0 SER 149 ? A SER 12 13 1 Y 1 0 PRO 150 ? A PRO 13 14 1 Y 1 0 GLN 151 ? A GLN 14 15 1 Y 1 0 GLU 152 ? A GLU 15 16 1 Y 1 0 PRO 153 ? A PRO 16 17 1 Y 1 0 ASP 154 ? A ASP 17 18 1 Y 1 0 SER 155 ? A SER 18 19 1 Y 1 0 SER 156 ? A SER 19 20 1 Y 1 0 SER 157 ? A SER 20 21 1 Y 1 0 GLY 158 ? A GLY 21 22 1 Y 1 0 VAL 159 ? A VAL 22 23 1 Y 1 0 GLY 160 ? A GLY 23 24 1 Y 1 0 LYS 161 ? A LYS 24 25 1 Y 1 0 SER 162 ? A SER 25 26 1 Y 1 0 GLY 163 ? A GLY 26 27 1 Y 1 0 LYS 164 ? A LYS 27 28 1 Y 1 0 GLN 165 ? A GLN 28 29 1 Y 1 0 PRO 166 ? A PRO 29 30 1 Y 1 0 ALA 167 ? A ALA 30 31 1 Y 1 0 ARG 168 ? A ARG 31 32 1 Y 1 0 LYS 169 ? A LYS 32 33 1 Y 1 0 ARG 170 ? A ARG 33 34 1 Y 1 0 LEU 171 ? A LEU 34 35 1 Y 1 0 ASN 172 ? A ASN 35 36 1 Y 1 0 PHE 173 ? A PHE 36 37 1 Y 1 0 GLY 174 ? A GLY 37 38 1 Y 1 0 GLN 175 ? A GLN 38 39 1 Y 1 0 THR 176 ? A THR 39 40 1 Y 1 0 GLY 177 ? A GLY 40 41 1 Y 1 0 ASP 178 ? A ASP 41 42 1 Y 1 0 SER 179 ? A SER 42 43 1 Y 1 0 GLU 180 ? A GLU 43 44 1 Y 1 0 SER 181 ? A SER 44 45 1 Y 1 0 VAL 182 ? A VAL 45 46 1 Y 1 0 PRO 183 ? A PRO 46 47 1 Y 1 0 ASP 184 ? A ASP 47 48 1 Y 1 0 PRO 185 ? A PRO 48 49 1 Y 1 0 GLN 186 ? A GLN 49 50 1 Y 1 0 PRO 187 ? A PRO 50 51 1 Y 1 0 LEU 188 ? A LEU 51 52 1 Y 1 0 GLY 189 ? A GLY 52 53 1 Y 1 0 GLU 190 ? A GLU 53 54 1 Y 1 0 PRO 191 ? A PRO 54 55 1 Y 1 0 PRO 192 ? A PRO 55 56 1 Y 1 0 ALA 193 ? A ALA 56 57 1 Y 1 0 ALA 194 ? A ALA 57 58 1 Y 1 0 PRO 195 ? A PRO 58 59 1 Y 1 0 THR 196 ? A THR 59 60 1 Y 1 0 SER 197 ? A SER 60 61 1 Y 1 0 LEU 198 ? A LEU 61 62 1 Y 1 0 GLY 199 ? A GLY 62 63 1 Y 1 0 SER 200 ? A SER 63 64 1 Y 1 0 ASN 201 ? A ASN 64 65 1 Y 1 0 THR 202 ? A THR 65 66 1 Y 1 0 MET 203 ? A MET 66 67 1 Y 1 0 ALA 204 ? A ALA 67 68 1 Y 1 0 SER 205 ? A SER 68 69 1 Y 1 0 GLY 206 ? A GLY 69 70 1 Y 1 0 GLY 207 ? A GLY 70 71 1 Y 1 0 GLY 208 ? A GLY 71 72 1 Y 1 0 ALA 209 ? A ALA 72 73 1 Y 1 0 PRO 210 ? A PRO 73 74 1 Y 1 0 MET 211 ? A MET 74 75 1 Y 1 0 ALA 212 ? A ALA 75 76 1 Y 1 0 ASP 213 ? A ASP 76 77 1 Y 1 0 ASN 214 ? A ASN 77 78 1 Y 1 0 ASN 215 ? A ASN 78 79 1 Y 1 0 GLU 216 ? A GLU 79 80 1 Y 1 0 GLY 217 ? A GLY 80 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_admin.entry_id 8A9U _em_admin.current_status REL _em_admin.deposition_date 2022-06-29 _em_admin.deposition_site PDBE _em_admin.last_update 2024-11-13 _em_admin.map_release_date 2022-09-21 _em_admin.title 'Full AAV3B-VP1KO virion' # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 46350 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Adeno-associated virus - 3' _em_entity_assembly_naturalsource.strain 3B _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON III (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images 2384 _em_image_recording.avg_electron_dose_per_subtomogram ? # _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.details ? _em_particle_selection.method ? _em_particle_selection.num_particles_selected 401717 _em_particle_selection.reference_model ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'CRYSTALLOGRAPHY MERGING' ? ? ? 1 1 1 2 'PARTICLE SELECTION' ? RELION 3.1 1 ? ? 3 'IMAGE ACQUISITION' ? ? ? ? ? 1 4 MASKING ? ? ? ? ? ? 5 'CTF CORRECTION' ? CTFFIND 4.1.13 1 ? ? 6 'LAYERLINE INDEXING' ? ? ? ? ? ? 7 'DIFFRACTION INDEXING' ? ? ? ? ? ? 8 'MODEL FITTING' ? PHENIX ? ? 1 ? 9 OTHER ? ? ? ? ? ? 10 'MODEL REFINEMENT' ? PHENIX ? ? 1 ? 11 'INITIAL EULER ASSIGNMENT' ? RELION 3.1 1 ? ? 12 'FINAL EULER ASSIGNMENT' ? RELION 3.1 1 ? ? 13 CLASSIFICATION ? ? ? 1 ? ? 14 RECONSTRUCTION ? RELION 3.1 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details 'VP1KO 4.23E+13 vg/ml' _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _em_virus_natural_host.id 1 _em_virus_natural_host.entity_assembly_id 1 _em_virus_natural_host.ncbi_tax_id 9606 _em_virus_natural_host.organism 'Homo sapiens' _em_virus_natural_host.strain ? # _em_virus_shell.id 1 _em_virus_shell.entity_assembly_id 1 _em_virus_shell.diameter 260 _em_virus_shell.name ? _em_virus_shell.triangulation 1 # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3KIC # _atom_sites.entry_id 8A9U _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_