HEADER LYASE 04-JUL-22 8ABV TITLE CRYSTAL STRUCTURE OF SPLDPA IN COMPLEX WITH ERYTHRO-DGPD COMPND MOL_ID: 1; COMPND 2 MOLECULE: SNOAL-LIKE DOMAIN-CONTAINING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SPHINGOMONAS PAUCIMOBILIS; SOURCE 3 ORGANISM_TAXID: 13689; SOURCE 4 STRAIN: NBRC 103272 / SYK-6; SOURCE 5 GENE: SLG_12650; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS LIGNIN, LYASE, DEHYDRATASE EXPDTA X-RAY DIFFRACTION AUTHOR M.ZAHN,E.KUATSJAH,G.T.BECKHAM,J.E.MCGEEHAN REVDAT 2 01-MAY-24 8ABV 1 REMARK REVDAT 1 01-FEB-23 8ABV 0 JRNL AUTH E.KUATSJAH,M.ZAHN,X.CHEN,R.KATO,D.J.HINCHEN,M.O.KONEV, JRNL AUTH 2 R.KATAHIRA,C.ORR,A.WAGNER,Y.ZOU,S.J.HAUGEN,K.J.RAMIREZ, JRNL AUTH 3 J.K.MICHENER,A.R.PICKFORD,N.KAMIMURA,E.MASAI,K.N.HOUK, JRNL AUTH 4 J.E.MCGEEHAN,G.T.BECKHAM JRNL TITL BIOCHEMICAL AND STRUCTURAL CHARACTERIZATION OF A JRNL TITL 2 SPHINGOMONAD DIARYLPROPANE LYASE FOR COFACTORLESS JRNL TITL 3 DEFORMYLATION. JRNL REF PROC.NATL.ACAD.SCI.USA V. 120 46120 2023 JRNL REFN ESSN 1091-6490 JRNL PMID 36652470 JRNL DOI 10.1073/PNAS.2212246120 REMARK 2 REMARK 2 RESOLUTION. 1.68 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.68 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 86.92 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 78.4 REMARK 3 NUMBER OF REFLECTIONS : 23170 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.148 REMARK 3 FREE R VALUE : 0.177 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.950 REMARK 3 FREE R VALUE TEST SET COUNT : 1147 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.68 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.73 REMARK 3 REFLECTION IN BIN (WORKING SET) : 155 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 7.66 REMARK 3 BIN R VALUE (WORKING SET) : 0.2980 REMARK 3 BIN FREE R VALUE SET COUNT : 10 REMARK 3 BIN FREE R VALUE : 0.3260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2005 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 63 REMARK 3 SOLVENT ATOMS : 233 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.04600 REMARK 3 B22 (A**2) : 0.04600 REMARK 3 B33 (A**2) : -0.15000 REMARK 3 B12 (A**2) : 0.02300 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.117 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.106 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.071 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.618 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.966 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2137 ; 0.015 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1945 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2897 ; 1.879 ; 1.649 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4469 ; 1.489 ; 1.582 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 245 ; 7.172 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 126 ;31.540 ;22.063 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 343 ;13.182 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;11.400 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 243 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2413 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 525 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 434 ; 0.212 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 121 ; 0.201 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 985 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 180 ; 0.188 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 977 ; 1.679 ; 2.033 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 976 ; 1.680 ; 2.032 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1220 ; 2.502 ; 3.037 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1221 ; 2.501 ; 3.038 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1159 ; 2.790 ; 2.360 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1160 ; 2.789 ; 2.360 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1676 ; 4.344 ; 3.421 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1677 ; 4.343 ; 3.421 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 5 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -1 A 242 REMARK 3 RESIDUE RANGE : A 301 A 301 REMARK 3 RESIDUE RANGE : A 401 A 401 REMARK 3 RESIDUE RANGE : A 501 A 501 REMARK 3 RESIDUE RANGE : A 502 A 502 REMARK 3 ORIGIN FOR THE GROUP (A): 25.1264 11.3346 17.4785 REMARK 3 T TENSOR REMARK 3 T11: 0.0057 T22: 0.0086 REMARK 3 T33: 0.0122 T12: -0.0070 REMARK 3 T13: 0.0051 T23: -0.0058 REMARK 3 L TENSOR REMARK 3 L11: 0.1143 L22: 0.1084 REMARK 3 L33: 0.1038 L12: 0.0215 REMARK 3 L13: -0.0179 L23: 0.0042 REMARK 3 S TENSOR REMARK 3 S11: -0.0043 S12: 0.0034 S13: -0.0214 REMARK 3 S21: 0.0083 S22: -0.0098 S23: 0.0238 REMARK 3 S31: 0.0232 S32: -0.0287 S33: 0.0140 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8ABV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-JUL-22. REMARK 100 THE DEPOSITION ID IS D_1292120828. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-FEB-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23171 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.683 REMARK 200 RESOLUTION RANGE LOW (A) : 86.922 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.5 REMARK 200 DATA REDUNDANCY : 19.90 REMARK 200 R MERGE (I) : 0.19400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.68 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 58.7 REMARK 200 DATA REDUNDANCY IN SHELL : 19.00 REMARK 200 R MERGE FOR SHELL (I) : 2.50600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NALDPA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 4000, 0.2 M LITHIUM SULFATE, REMARK 280 0.1 M TRIS PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -154.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 71.28100 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 35.64050 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 61.73116 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 303 LIES ON A SPECIAL POSITION. REMARK 375 O2 SO4 A 303 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 624 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 629 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 462 O HOH A 477 2.03 REMARK 500 O HOH A 479 O HOH A 616 2.11 REMARK 500 OE2 GLU A 170 O HOH A 401 2.16 REMARK 500 O HOH A 567 O HOH A 587 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 577 O HOH A 577 4556 1.84 REMARK 500 REMARK 500 REMARK: NULL DBREF 8ABV A 1 242 UNP G2IQR8 G2IQR8_SPHSK 1 242 SEQADV 8ABV MET A -20 UNP G2IQR8 INITIATING METHIONINE SEQADV 8ABV GLY A -19 UNP G2IQR8 EXPRESSION TAG SEQADV 8ABV SER A -18 UNP G2IQR8 EXPRESSION TAG SEQADV 8ABV SER A -17 UNP G2IQR8 EXPRESSION TAG SEQADV 8ABV HIS A -16 UNP G2IQR8 EXPRESSION TAG SEQADV 8ABV HIS A -15 UNP G2IQR8 EXPRESSION TAG SEQADV 8ABV HIS A -14 UNP G2IQR8 EXPRESSION TAG SEQADV 8ABV HIS A -13 UNP G2IQR8 EXPRESSION TAG SEQADV 8ABV HIS A -12 UNP G2IQR8 EXPRESSION TAG SEQADV 8ABV HIS A -11 UNP G2IQR8 EXPRESSION TAG SEQADV 8ABV SER A -10 UNP G2IQR8 EXPRESSION TAG SEQADV 8ABV SER A -9 UNP G2IQR8 EXPRESSION TAG SEQADV 8ABV GLY A -8 UNP G2IQR8 EXPRESSION TAG SEQADV 8ABV LEU A -7 UNP G2IQR8 EXPRESSION TAG SEQADV 8ABV VAL A -6 UNP G2IQR8 EXPRESSION TAG SEQADV 8ABV PRO A -5 UNP G2IQR8 EXPRESSION TAG SEQADV 8ABV ARG A -4 UNP G2IQR8 EXPRESSION TAG SEQADV 8ABV GLY A -3 UNP G2IQR8 EXPRESSION TAG SEQADV 8ABV SER A -2 UNP G2IQR8 EXPRESSION TAG SEQADV 8ABV HIS A -1 UNP G2IQR8 EXPRESSION TAG SEQADV 8ABV MET A 0 UNP G2IQR8 EXPRESSION TAG SEQRES 1 A 263 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 263 LEU VAL PRO ARG GLY SER HIS MET MET ALA ASP VAL GLU SEQRES 3 A 263 THR ARG LEU ALA GLU LEU GLU LYS LYS VAL GLN GLN LEU SEQRES 4 A 263 GLU ASP VAL ASN ALA ILE ARG ARG LEU GLN TRP ALA TYR SEQRES 5 A 263 GLY TYR TYR ILE ASP TYR ASN ARG PRO GLU GLU VAL ALA SEQRES 6 A 263 GLY LEU PHE ALA LYS ASP GLY VAL VAL VAL PHE LEU SER SEQRES 7 A 263 GLY GLU TYR VAL GLY TYR GLU GLY VAL MET ARG LEU TYR SEQRES 8 A 263 GLY THR TRP PHE GLN ASN ARG PHE THR GLY GLY ARG ARG SEQRES 9 A 263 GLY PRO VAL HIS GLY LEU LEU LEU ASP HIS PHE GLN LEU SEQRES 10 A 263 GLN ASP ILE ILE THR VAL ALA GLU ASP GLY GLN THR ALA SEQRES 11 A 263 LYS GLY ARG PHE ARG GLY ILE LEU ALA GLY GLY TRP HIS SEQRES 12 A 263 ASP GLU VAL LEU HIS GLU LYS PRO ASP GLU VAL PRO GLN SEQRES 13 A 263 GLN PHE TRP GLU SER GLY LEU TYR GLU ASN ASP TYR VAL SEQRES 14 A 263 LYS GLU ASP GLY VAL TRP LYS ILE LYS ARG LEU ASP TYR SEQRES 15 A 263 MET MET GLN TRP GLN GLY ASP TYR GLU THR GLY TRP ALA SEQRES 16 A 263 HIS THR VAL ALA HIS LEU GLN PRO ALA LEU VAL CYS TYR SEQRES 17 A 263 PRO GLU ASN PRO ASP GLY PRO ASP ARG ILE LEU PRO GLN SEQRES 18 A 263 LYS ASP VAL ARG GLN THR TRP PRO HIS ARG TYR GLU VAL SEQRES 19 A 263 PRO MET SER PHE ALA HIS PRO VAL LEU GLY LYS ALA PHE SEQRES 20 A 263 MET VAL GLU ASN PHE THR PRO MET MET MET LYS LYS GLU SEQRES 21 A 263 LYS PRO ALA HET GOL A 301 6 HET GOL A 302 6 HET SO4 A 303 5 HET LJU A 304 23 HET LJL A 305 23 HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM LJU (1S,2R)-1,2-BIS(3-METHOXY-4-OXIDANYL-PHENYL)PROPANE-1, HETNAM 2 LJU 3-DIOL HETNAM LJL (1R,2S)-1,2-BIS(3-METHOXY-4-OXIDANYL-PHENYL)PROPANE-1, HETNAM 2 LJL 3-DIOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 2(C3 H8 O3) FORMUL 4 SO4 O4 S 2- FORMUL 5 LJU C17 H20 O6 FORMUL 6 LJL C17 H20 O6 FORMUL 7 HOH *233(H2 O) HELIX 1 AA1 HIS A -1 TYR A 37 1 39 HELIX 2 AA2 ARG A 39 GLY A 45 1 7 HELIX 3 AA3 GLY A 62 GLY A 71 1 10 HELIX 4 AA4 TRP A 73 GLY A 80 1 8 HELIX 5 AA5 ASP A 123 LYS A 129 5 7 HELIX 6 AA6 GLY A 172 THR A 176 5 5 HELIX 7 AA7 PRO A 199 VAL A 203 5 5 HELIX 8 AA8 LEU A 222 PHE A 226 5 5 HELIX 9 AA9 MET A 227 MET A 235 5 9 SHEET 1 AA1 7 LEU A 89 VAL A 102 0 SHEET 2 AA1 7 THR A 108 TRP A 121 -1 O LYS A 110 N THR A 101 SHEET 3 AA1 7 GLN A 136 GLU A 150 -1 O GLU A 139 N LEU A 117 SHEET 4 AA1 7 VAL A 153 ASP A 168 -1 O MET A 162 N LEU A 142 SHEET 5 AA1 7 PHE A 47 PHE A 55 1 N VAL A 54 O LEU A 159 SHEET 6 AA1 7 GLY A 58 VAL A 61 -1 O TYR A 60 N VAL A 53 SHEET 7 AA1 7 ARG A 196 ILE A 197 -1 O ARG A 196 N GLU A 59 CISPEP 1 GLY A 84 PRO A 85 0 2.78 CISPEP 2 TYR A 187 PRO A 188 0 5.15 CISPEP 3 TRP A 207 PRO A 208 0 7.78 CRYST1 71.281 71.281 86.922 90.00 90.00 120.00 P 3 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014029 0.008100 0.000000 0.00000 SCALE2 0.000000 0.016199 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011505 0.00000