HEADER METAL BINDING PROTEIN 22-JUL-22 8AHS TITLE CRYSTAL STRUCTURE OF HUMAN CA2+/CALMODULIN IN COMPLEX WITH MELITTIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALMODULIN-1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: MELITTIN; COMPND 7 CHAIN: C; COMPND 8 SYNONYM: MEL,MLT,ALLERGEN API M 3,ALLERGEN API M III; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CALM1, CALM, CAM, CAM1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: APIS MELLIFERA; SOURCE 11 ORGANISM_COMMON: HONEY BEE; SOURCE 12 ORGANISM_TAXID: 7460 KEYWDS HUB PROTEIN, LINEAR RECOGNITION MOTIF, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Z.DURVANGER,V.HARMAT REVDAT 3 07-FEB-24 8AHS 1 REMARK REVDAT 2 26-APR-23 8AHS 1 JRNL REVDAT 1 22-MAR-23 8AHS 0 JRNL AUTH Z.DURVANGER,T.JUHASZ,K.LILIOM,V.HARMAT JRNL TITL STRUCTURES OF CALMODULIN-MELITTIN COMPLEXES SHOW MULTIPLE JRNL TITL 2 BINDING MODES LACKING CLASSICAL ANCHORING INTERACTIONS. JRNL REF J.BIOL.CHEM. V. 299 04596 2023 JRNL REFN ESSN 1083-351X JRNL PMID 36906144 JRNL DOI 10.1016/J.JBC.2023.104596 REMARK 2 REMARK 2 RESOLUTION. 2.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.010 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 6652 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.267 REMARK 3 R VALUE (WORKING SET) : 0.267 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.660 REMARK 3 FREE R VALUE TEST SET COUNT : 310 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.3100 - 3.1200 1.00 3479 167 0.2550 0.2515 REMARK 3 2 3.1200 - 2.4800 0.89 2863 143 0.3739 0.4334 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.365 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 41.568 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 90.09 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 116.4 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 1160 REMARK 3 ANGLE : 0.723 1577 REMARK 3 CHIRALITY : 0.046 184 REMARK 3 PLANARITY : 0.006 215 REMARK 3 DIHEDRAL : 14.510 383 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.3913 -26.4918 -17.7440 REMARK 3 T TENSOR REMARK 3 T11: 0.9646 T22: 0.7516 REMARK 3 T33: 0.6155 T12: 0.2851 REMARK 3 T13: 0.1782 T23: 0.1491 REMARK 3 L TENSOR REMARK 3 L11: 8.5783 L22: 5.1121 REMARK 3 L33: 6.9386 L12: -1.8709 REMARK 3 L13: 2.4670 L23: -0.0469 REMARK 3 S TENSOR REMARK 3 S11: 0.6460 S12: 0.3894 S13: 0.4280 REMARK 3 S21: -0.2018 S22: -0.2150 S23: 0.4214 REMARK 3 S31: -0.6040 S32: -1.2130 S33: -0.3661 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 76 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.8205 -10.8473 -5.7885 REMARK 3 T TENSOR REMARK 3 T11: 0.6983 T22: 0.3706 REMARK 3 T33: 0.8431 T12: -0.1020 REMARK 3 T13: 0.0358 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 9.1448 L22: 4.8345 REMARK 3 L33: 8.9920 L12: -6.2311 REMARK 3 L13: -1.9518 L23: -0.2350 REMARK 3 S TENSOR REMARK 3 S11: -0.3327 S12: -0.3799 S13: -0.3658 REMARK 3 S21: 0.9548 S22: 0.1782 S23: -1.0788 REMARK 3 S31: 0.1992 S32: 0.3752 S33: 0.1287 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 129 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.9295 -6.9876 -8.1411 REMARK 3 T TENSOR REMARK 3 T11: 0.8618 T22: 0.2451 REMARK 3 T33: 0.7044 T12: 0.0262 REMARK 3 T13: -0.0354 T23: 0.0091 REMARK 3 L TENSOR REMARK 3 L11: 8.4915 L22: 1.1013 REMARK 3 L33: 8.4138 L12: 0.5219 REMARK 3 L13: -3.4494 L23: -0.6242 REMARK 3 S TENSOR REMARK 3 S11: 0.0578 S12: 0.5688 S13: -0.2438 REMARK 3 S21: 0.5267 S22: -1.0094 S23: 1.0826 REMARK 3 S31: -0.3580 S32: -1.5595 S33: 0.2937 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 2 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.7186 -20.9477 -12.4888 REMARK 3 T TENSOR REMARK 3 T11: 2.0244 T22: 0.6924 REMARK 3 T33: 1.2657 T12: 0.6147 REMARK 3 T13: 1.1058 T23: -0.2537 REMARK 3 L TENSOR REMARK 3 L11: 9.6239 L22: 3.7072 REMARK 3 L33: 3.9114 L12: -5.3032 REMARK 3 L13: -0.5611 L23: 1.1063 REMARK 3 S TENSOR REMARK 3 S11: 0.5010 S12: 1.1958 S13: -1.6931 REMARK 3 S21: -0.3716 S22: -0.6795 S23: 0.8169 REMARK 3 S31: 0.0888 S32: -0.8070 S33: 1.9053 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 13 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.5018 -7.4498 -18.8374 REMARK 3 T TENSOR REMARK 3 T11: 2.4362 T22: 1.4663 REMARK 3 T33: 1.2661 T12: 0.4279 REMARK 3 T13: 0.6441 T23: 0.7693 REMARK 3 L TENSOR REMARK 3 L11: 4.0726 L22: 3.8924 REMARK 3 L33: 1.5248 L12: 1.0034 REMARK 3 L13: 2.4755 L23: 0.5541 REMARK 3 S TENSOR REMARK 3 S11: -2.1952 S12: 2.5302 S13: 2.3175 REMARK 3 S21: -1.0473 S22: 1.8764 S23: 1.0415 REMARK 3 S31: -0.2616 S32: -0.4759 S33: 0.0538 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8AHS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-JUL-22. REMARK 100 THE DEPOSITION ID IS D_1292124506. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97242 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7039 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 35.310 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 10.07 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.4600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.140 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3SUI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NACL, 22W/V% PEG3350, 0.1M BIS REMARK 280 -TRIS, PH 5.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 116.93333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 233.86667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 175.40000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 292.33333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 58.46667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 116.93333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 233.86667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 292.33333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 175.40000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 58.46667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 ALA A 1 REMARK 465 ASP A 2 REMARK 465 GLN A 3 REMARK 465 THR A 79 REMARK 465 ASP A 80 REMARK 465 ALA A 147 REMARK 465 LYS A 148 REMARK 465 GLY C 1 REMARK 465 GLN C 25 REMARK 465 GLN C 26 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 4 CG CD1 CD2 REMARK 470 THR A 5 OG1 CG2 REMARK 470 GLU A 7 CG CD OE1 OE2 REMARK 470 ILE A 9 CG1 CG2 CD1 REMARK 470 GLU A 11 CG CD OE1 OE2 REMARK 470 LYS A 13 CG CD CE NZ REMARK 470 SER A 17 OG REMARK 470 LYS A 21 CE NZ REMARK 470 GLU A 45 OE1 OE2 REMARK 470 GLU A 54 CG CD OE1 OE2 REMARK 470 VAL A 55 CG1 CG2 REMARK 470 ILE A 63 CD1 REMARK 470 LEU A 69 CG CD1 CD2 REMARK 470 ARG A 74 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 75 CE NZ REMARK 470 MET A 76 CG SD CE REMARK 470 LYS A 77 CG CD CE NZ REMARK 470 ASP A 78 CG OD1 OD2 REMARK 470 GLU A 82 CG CD OE1 OE2 REMARK 470 GLU A 83 CG CD OE1 OE2 REMARK 470 GLU A 84 CG CD OE1 OE2 REMARK 470 ILE A 85 CD1 REMARK 470 GLU A 87 CG CD OE1 OE2 REMARK 470 LYS A 94 CG CD CE NZ REMARK 470 ARG A 106 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 114 CD OE1 OE2 REMARK 470 LYS A 115 CG CD CE NZ REMARK 470 LEU A 116 CG CD1 CD2 REMARK 470 THR A 117 OG1 CG2 REMARK 470 GLU A 119 CG CD OE1 OE2 REMARK 470 GLU A 123 CG CD OE1 OE2 REMARK 470 ARG A 126 CG CD NE CZ NH1 NH2 REMARK 470 THR A 146 OG1 CG2 REMARK 470 ILE C 2 CG1 CG2 CD1 REMARK 470 VAL C 5 CG1 CG2 REMARK 470 LEU C 6 CG CD1 CD2 REMARK 470 LYS C 7 CG CD CE NZ REMARK 470 VAL C 8 CG1 CG2 REMARK 470 LEU C 9 CG CD1 CD2 REMARK 470 THR C 11 OG1 CG2 REMARK 470 SER C 18 OG REMARK 470 ILE C 20 CG1 CG2 CD1 REMARK 470 LYS C 21 CG CD CE NZ REMARK 470 ARG C 22 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 23 CG CD CE NZ REMARK 470 ARG C 24 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 82 -34.66 -146.82 REMARK 500 THR C 11 -63.42 -128.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 20 OD1 REMARK 620 2 ASP A 22 OD1 66.0 REMARK 620 3 ASP A 24 OD1 73.7 75.4 REMARK 620 4 THR A 26 O 79.6 140.2 76.3 REMARK 620 5 GLU A 31 OE1 109.4 126.3 157.9 82.7 REMARK 620 6 GLU A 31 OE2 86.7 70.4 145.2 128.8 56.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 56 OD1 REMARK 620 2 ASP A 58 OD1 79.0 REMARK 620 3 ASN A 60 OD1 84.6 80.0 REMARK 620 4 THR A 62 O 99.1 147.4 67.4 REMARK 620 5 GLU A 67 OE1 122.6 126.5 142.7 82.2 REMARK 620 6 GLU A 67 OE2 100.7 73.9 151.8 137.3 55.2 REMARK 620 7 HOH A 303 O 156.4 99.3 72.1 69.5 77.5 101.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 203 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 93 OD1 REMARK 620 2 ASP A 95 OD1 75.3 REMARK 620 3 ASN A 97 OD1 80.9 82.2 REMARK 620 4 TYR A 99 O 98.2 155.8 73.7 REMARK 620 5 GLU A 104 OE1 109.7 129.1 148.2 75.1 REMARK 620 6 GLU A 104 OE2 102.2 77.7 158.1 126.4 51.4 REMARK 620 7 HOH A 302 O 157.4 86.3 83.7 93.2 92.0 86.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 204 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 129 OD1 REMARK 620 2 ASP A 131 OD1 81.0 REMARK 620 3 ASP A 131 OD2 119.9 44.0 REMARK 620 4 ASP A 133 OD1 94.9 78.3 95.1 REMARK 620 5 GLN A 135 O 83.6 153.3 156.5 81.5 REMARK 620 6 GLU A 140 OE1 95.9 126.9 100.0 153.9 76.2 REMARK 620 7 GLU A 140 OE2 75.8 79.6 72.7 157.0 117.4 49.1 REMARK 620 8 HOH A 301 O 170.2 92.6 57.4 76.5 99.4 93.8 110.5 REMARK 620 N 1 2 3 4 5 6 7 DBREF 8AHS A 0 148 UNP P0DP23 CALM1_HUMAN 1 149 DBREF 8AHS C 1 26 UNP P01501 MEL_APIME 44 69 SEQRES 1 A 149 MET ALA ASP GLN LEU THR GLU GLU GLN ILE ALA GLU PHE SEQRES 2 A 149 LYS GLU ALA PHE SER LEU PHE ASP LYS ASP GLY ASP GLY SEQRES 3 A 149 THR ILE THR THR LYS GLU LEU GLY THR VAL MET ARG SER SEQRES 4 A 149 LEU GLY GLN ASN PRO THR GLU ALA GLU LEU GLN ASP MET SEQRES 5 A 149 ILE ASN GLU VAL ASP ALA ASP GLY ASN GLY THR ILE ASP SEQRES 6 A 149 PHE PRO GLU PHE LEU THR MET MET ALA ARG LYS MET LYS SEQRES 7 A 149 ASP THR ASP SER GLU GLU GLU ILE ARG GLU ALA PHE ARG SEQRES 8 A 149 VAL PHE ASP LYS ASP GLY ASN GLY TYR ILE SER ALA ALA SEQRES 9 A 149 GLU LEU ARG HIS VAL MET THR ASN LEU GLY GLU LYS LEU SEQRES 10 A 149 THR ASP GLU GLU VAL ASP GLU MET ILE ARG GLU ALA ASP SEQRES 11 A 149 ILE ASP GLY ASP GLY GLN VAL ASN TYR GLU GLU PHE VAL SEQRES 12 A 149 GLN MET MET THR ALA LYS SEQRES 1 C 26 GLY ILE GLY ALA VAL LEU LYS VAL LEU THR THR GLY LEU SEQRES 2 C 26 PRO ALA LEU ILE SER TRP ILE LYS ARG LYS ARG GLN GLN HET CA A 201 1 HET CA A 202 1 HET CA A 203 1 HET CA A 204 1 HETNAM CA CALCIUM ION FORMUL 3 CA 4(CA 2+) FORMUL 7 HOH *3(H2 O) HELIX 1 AA1 THR A 5 ASP A 20 1 16 HELIX 2 AA2 THR A 28 LEU A 39 1 12 HELIX 3 AA3 THR A 44 GLU A 54 1 11 HELIX 4 AA4 ASP A 64 ASP A 78 1 15 HELIX 5 AA5 GLU A 82 ASP A 93 1 12 HELIX 6 AA6 SER A 101 GLY A 113 1 13 HELIX 7 AA7 THR A 117 ASP A 129 1 13 HELIX 8 AA8 TYR A 138 THR A 146 1 9 HELIX 9 AA9 GLY C 3 THR C 11 1 9 HELIX 10 AB1 GLY C 12 ARG C 22 1 11 SHEET 1 AA1 2 TYR A 99 ILE A 100 0 SHEET 2 AA1 2 VAL A 136 ASN A 137 -1 O VAL A 136 N ILE A 100 LINK OD1 ASP A 20 CA CA A 201 1555 1555 2.48 LINK OD1 ASP A 22 CA CA A 201 1555 1555 2.43 LINK OD1 ASP A 24 CA CA A 201 1555 1555 2.32 LINK O THR A 26 CA CA A 201 1555 1555 2.35 LINK OE1 GLU A 31 CA CA A 201 1555 1555 2.35 LINK OE2 GLU A 31 CA CA A 201 1555 1555 2.32 LINK OD1 ASP A 56 CA CA A 202 1555 1555 2.34 LINK OD1 ASP A 58 CA CA A 202 1555 1555 2.22 LINK OD1 ASN A 60 CA CA A 202 1555 1555 2.49 LINK O THR A 62 CA CA A 202 1555 1555 2.56 LINK OE1 GLU A 67 CA CA A 202 1555 1555 2.30 LINK OE2 GLU A 67 CA CA A 202 1555 1555 2.44 LINK OD1 ASP A 93 CA CA A 203 1555 1555 2.31 LINK OD1 ASP A 95 CA CA A 203 1555 1555 2.38 LINK OD1 ASN A 97 CA CA A 203 1555 1555 2.52 LINK O TYR A 99 CA CA A 203 1555 1555 2.42 LINK OE1 GLU A 104 CA CA A 203 1555 1555 2.64 LINK OE2 GLU A 104 CA CA A 203 1555 1555 2.39 LINK OD1 ASP A 129 CA CA A 204 1555 1555 2.33 LINK OD1 ASP A 131 CA CA A 204 1555 1555 2.24 LINK OD2 ASP A 131 CA CA A 204 1555 1555 3.14 LINK OD1 ASP A 133 CA CA A 204 1555 1555 2.25 LINK O GLN A 135 CA CA A 204 1555 1555 2.35 LINK OE1 GLU A 140 CA CA A 204 1555 1555 2.54 LINK OE2 GLU A 140 CA CA A 204 1555 1555 2.73 LINK CA CA A 202 O HOH A 303 1555 1555 2.74 LINK CA CA A 203 O HOH A 302 1555 1555 2.33 LINK CA CA A 204 O HOH A 301 1555 1555 2.55 CRYST1 40.770 40.770 350.800 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024528 0.014161 0.000000 0.00000 SCALE2 0.000000 0.028322 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002851 0.00000