HEADER HYDROLASE 27-JUL-22 8AIR TITLE CRYSTAL STRUCTURE OF CUTINASE RGCUTII FROM RHIZOBACTER GUMMIPHILUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RGCUTII; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHIZOBACTER GUMMIPHILUS; SOURCE 3 ORGANISM_TAXID: 946333; SOURCE 4 GENE: A4W93_03190; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PET, CUTINASE, ESTER BOND, CLEAVAGE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.ZAHN,M.D.ALLEN,A.R.PICKFORD,J.E.MCGEEHAN REVDAT 5 07-FEB-24 8AIR 1 JRNL REVDAT 4 03-MAY-23 8AIR 1 JRNL REVDAT 3 22-MAR-23 8AIR 1 JRNL REVDAT 2 15-MAR-23 8AIR 1 JRNL REVDAT 1 08-MAR-23 8AIR 0 JRNL AUTH L.AVILAN,B.R.LICHTENSTEIN,G.KONIG,M.ZAHN,M.D.ALLEN, JRNL AUTH 2 L.OLIVEIRA,M.CLARK,V.BEMMER,R.GRAHAM,H.P.AUSTIN,G.DOMINICK, JRNL AUTH 3 C.W.JOHNSON,G.T.BECKHAM,J.E.MCGEEHAN,A.R.PICKFORD JRNL TITL CONCENTRATION-DEPENDENT INHIBITION OF MESOPHILIC PETASES ON JRNL TITL 2 POLY(ETHYLENE TEREPHTHALATE) CAN BE ELIMINATED BY ENZYME JRNL TITL 3 ENGINEERING. JRNL REF CHEMSUSCHEM V. 16 02277 2023 JRNL REFN ESSN 1864-564X JRNL PMID 36811288 JRNL DOI 10.1002/CSSC.202202277 REMARK 2 REMARK 2 RESOLUTION. 1.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0352 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 92.2 REMARK 3 NUMBER OF REFLECTIONS : 104451 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.041 REMARK 3 FREE R VALUE TEST SET COUNT : 5265 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.08 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.11 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6904 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.31 REMARK 3 BIN R VALUE (WORKING SET) : 0.4140 REMARK 3 BIN FREE R VALUE SET COUNT : 366 REMARK 3 BIN FREE R VALUE : 0.4140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1920 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 334 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.46600 REMARK 3 B22 (A**2) : 0.46600 REMARK 3 B33 (A**2) : -1.51100 REMARK 3 B12 (A**2) : 0.23300 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.036 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.037 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.033 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.519 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.970 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2019 ; 0.011 ; 0.011 REMARK 3 BOND LENGTHS OTHERS (A): 1786 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2764 ; 1.841 ; 1.638 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4177 ; 0.638 ; 1.544 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 271 ; 6.252 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 13 ;10.686 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 300 ;13.146 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 306 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2354 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 418 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 393 ; 0.238 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 62 ; 0.164 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1021 ; 0.185 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 236 ; 0.207 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1041 ; 0.842 ; 0.741 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1039 ; 0.836 ; 0.739 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1301 ; 1.321 ; 1.108 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1302 ; 1.322 ; 1.112 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 978 ; 1.376 ; 0.896 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 979 ; 1.376 ; 0.897 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1455 ; 2.046 ; 1.290 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1456 ; 2.046 ; 1.291 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 25 A 280 REMARK 3 ORIGIN FOR THE GROUP (A): 21.5331 -15.6011 1.0352 REMARK 3 T TENSOR REMARK 3 T11: 0.0143 T22: 0.0042 REMARK 3 T33: 0.0616 T12: 0.0054 REMARK 3 T13: -0.0069 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 0.8408 L22: 0.8759 REMARK 3 L33: 1.0906 L12: 0.1578 REMARK 3 L13: 0.0635 L23: 0.3490 REMARK 3 S TENSOR REMARK 3 S11: 0.0114 S12: -0.0317 S13: -0.0196 REMARK 3 S21: 0.0436 S22: 0.0081 S23: -0.0081 REMARK 3 S31: 0.0389 S32: 0.0348 S33: -0.0195 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8AIR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-JUL-22. REMARK 100 THE DEPOSITION ID IS D_1292124336. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91587 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 112681 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.080 REMARK 200 RESOLUTION RANGE LOW (A) : 49.080 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 8.700 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.08 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.77400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4CG1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5, 1 M SODIUM REMARK 280 ACETATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.24867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 148.49733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 111.37300 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 185.62167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 37.12433 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 74.24867 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 148.49733 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 185.62167 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 111.37300 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 37.12433 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 645 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 658 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 LEU A 3 REMARK 465 ASN A 4 REMARK 465 ARG A 5 REMARK 465 LEU A 6 REMARK 465 PHE A 7 REMARK 465 GLN A 8 REMARK 465 VAL A 9 REMARK 465 ALA A 10 REMARK 465 CYS A 11 REMARK 465 LEU A 12 REMARK 465 ALA A 13 REMARK 465 ALA A 14 REMARK 465 THR A 15 REMARK 465 LEU A 16 REMARK 465 VAL A 17 REMARK 465 THR A 18 REMARK 465 ALA A 19 REMARK 465 THR A 20 REMARK 465 ALA A 21 REMARK 465 ALA A 22 REMARK 465 SER A 23 REMARK 465 ALA A 24 REMARK 465 GLU A 281 REMARK 465 HIS A 282 REMARK 465 HIS A 283 REMARK 465 HIS A 284 REMARK 465 HIS A 285 REMARK 465 HIS A 286 REMARK 465 HIS A 287 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 259 O HOH A 401 1.77 REMARK 500 O HOH A 402 O HOH A 602 1.92 REMARK 500 OXT ACT A 302 O HOH A 402 2.05 REMARK 500 O HOH A 626 O HOH A 691 2.07 REMARK 500 O HOH A 700 O HOH A 726 2.13 REMARK 500 O HOH A 413 O HOH A 601 2.13 REMARK 500 O HOH A 409 O HOH A 651 2.14 REMARK 500 O HOH A 460 O HOH A 586 2.15 REMARK 500 O HOH A 413 O HOH A 649 2.16 REMARK 500 O HOH A 578 O HOH A 644 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 408 O HOH A 568 6555 2.02 REMARK 500 O HOH A 410 O HOH A 419 8555 2.05 REMARK 500 O HOH A 403 O HOH A 618 6555 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 40 NE - CZ - NH2 ANGL. DEV. = -5.0 DEGREES REMARK 500 ARG A 145 CG - CD - NE ANGL. DEV. = 16.4 DEGREES REMARK 500 ARG A 224 NE - CZ - NH2 ANGL. DEV. = -6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 53 87.03 -151.39 REMARK 500 ASN A 65 36.75 -140.22 REMARK 500 SER A 152 -125.71 68.39 REMARK 500 HIS A 206 -87.37 -122.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 115 0.12 SIDE CHAIN REMARK 500 ARG A 145 0.12 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 734 DISTANCE = 6.30 ANGSTROMS DBREF1 8AIR A 1 279 UNP A0A1W6L438_9BURK DBREF2 8AIR A A0A1W6L438 1 279 SEQADV 8AIR LEU A 280 UNP A0A1W6L43 EXPRESSION TAG SEQADV 8AIR GLU A 281 UNP A0A1W6L43 EXPRESSION TAG SEQADV 8AIR HIS A 282 UNP A0A1W6L43 EXPRESSION TAG SEQADV 8AIR HIS A 283 UNP A0A1W6L43 EXPRESSION TAG SEQADV 8AIR HIS A 284 UNP A0A1W6L43 EXPRESSION TAG SEQADV 8AIR HIS A 285 UNP A0A1W6L43 EXPRESSION TAG SEQADV 8AIR HIS A 286 UNP A0A1W6L43 EXPRESSION TAG SEQADV 8AIR HIS A 287 UNP A0A1W6L43 EXPRESSION TAG SEQRES 1 A 287 MET LYS LEU ASN ARG LEU PHE GLN VAL ALA CYS LEU ALA SEQRES 2 A 287 ALA THR LEU VAL THR ALA THR ALA ALA SER ALA VAL GLN SEQRES 3 A 287 ILE GLY PRO ALA PRO THR LYS ALA SER LEU GLU ALA SER SEQRES 4 A 287 ARG GLY PRO PHE THR VAL ALA THR THR ARG LEU SER ALA SEQRES 5 A 287 ASN GLY HIS GLY GLY GLY THR ILE TYR TYR PRO THR ASN SEQRES 6 A 287 ALA GLY ALA LYS VAL GLY VAL ILE ALA ILE VAL PRO GLY SEQRES 7 A 287 TYR LEU SER TYR GLN SER SER ILE GLU TRP TRP GLY PRO SEQRES 8 A 287 ARG LEU ALA SER HIS GLY PHE ALA VAL VAL THR ILE ASP SEQRES 9 A 287 THR LEU THR ILE TYR ASP GLN PRO SER SER ARG SER SER SEQRES 10 A 287 GLN GLN LEU ARG ALA LEU ASP GLN VAL VAL ALA LEU GLY SEQRES 11 A 287 SER LYS SER THR SER PRO LEU TYR ASN LYS VAL ASP GLY SEQRES 12 A 287 SER ARG THR GLY VAL MET GLY TRP SER MET GLY GLY GLY SEQRES 13 A 287 GLY SER LEU ILE SER ALA GLN ASN ARG PRO SER ILE LYS SEQRES 14 A 287 ALA ALA ALA PRO GLN ALA PRO TRP ASN THR THR SER ASN SEQRES 15 A 287 PHE SER SER LEU THR VAL PRO THR LEU ILE PHE ALA CYS SEQRES 16 A 287 GLN ALA ASP VAL VAL ALA PRO ILE LEU SER HIS ALA VAL SEQRES 17 A 287 PRO PHE TYR ASN SER MET SER ARG ASN PRO LYS GLN TYR SEQRES 18 A 287 LEU GLU ARG THR ALA GLY ASP HIS PHE CYS PHE ASN ASN SEQRES 19 A 287 ALA ASN PRO THR VAL GLY LEU LYS GLY VAL ALA TRP MET SEQRES 20 A 287 LYS ARG PHE ILE ASP GLY ASP THR ARG TYR THR SER PHE SEQRES 21 A 287 ALA CYS SER ASN PRO ASN ALA LEU GLY PHE SER SER PHE SEQRES 22 A 287 ARG THR GLU ARG CYS SER LEU GLU HIS HIS HIS HIS HIS SEQRES 23 A 287 HIS HET ACT A 301 4 HET ACT A 302 4 HETNAM ACT ACETATE ION FORMUL 2 ACT 2(C2 H3 O2 1-) FORMUL 4 HOH *334(H2 O) HELIX 1 AA1 THR A 32 ALA A 38 1 7 HELIX 2 AA2 TYR A 82 GLU A 87 5 6 HELIX 3 AA3 TRP A 88 SER A 95 1 8 HELIX 4 AA4 GLN A 111 GLY A 130 1 20 HELIX 5 AA5 SER A 152 ARG A 165 1 14 HELIX 6 AA6 HIS A 206 MET A 214 1 9 HELIX 7 AA7 ASN A 236 ASP A 252 1 17 HELIX 8 AA8 ASP A 254 ARG A 256 5 3 HELIX 9 AA9 TYR A 257 SER A 263 1 7 SHEET 1 AA1 6 VAL A 45 LEU A 50 0 SHEET 2 AA1 6 GLY A 58 PRO A 63 -1 O ILE A 60 N THR A 48 SHEET 3 AA1 6 PHE A 98 ILE A 103 -1 O VAL A 100 N TYR A 61 SHEET 4 AA1 6 VAL A 70 VAL A 76 1 N ILE A 75 O VAL A 101 SHEET 5 AA1 6 VAL A 141 GLY A 150 1 O ASP A 142 N VAL A 70 SHEET 6 AA1 6 ALA A 170 ALA A 171 1 O ALA A 170 N VAL A 148 SHEET 1 AA2 3 THR A 190 CYS A 195 0 SHEET 2 AA2 3 LYS A 219 ARG A 224 1 O GLN A 220 N ILE A 192 SHEET 3 AA2 3 PHE A 270 GLU A 276 -1 O ARG A 274 N TYR A 221 SSBOND 1 CYS A 195 CYS A 231 1555 1555 2.11 SSBOND 2 CYS A 262 CYS A 278 1555 1555 2.08 CRYST1 63.127 63.127 222.746 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015841 0.009146 0.000000 0.00000 SCALE2 0.000000 0.018292 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004489 0.00000