HEADER RNA 03-AUG-22 8AMG TITLE CRYSTAL STRUCTURE OF AUGUGGCAU DUPLEX WITH BARIUM IONS (MODEL 1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA (5'-R(*AP*UP*GP*UP*GP*GP*CP*AP*U)-3'); COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS UG WOBBLE, BA IONS, RNA, UGG REPEATS EXPDTA X-RAY DIFFRACTION AUTHOR A.KILISZEK,W.RYPNIEWSKI REVDAT 3 19-JUN-24 8AMG 1 REMARK REVDAT 2 01-FEB-23 8AMG 1 JRNL REVDAT 1 23-NOV-22 8AMG 0 JRNL AUTH A.KILISZEK,M.PLUTA,M.BEJGER,W.RYPNIEWSKI JRNL TITL STRUCTURE AND THERMODYNAMICS OF A UGG MOTIF INTERACTING WITH JRNL TITL 2 BA2+ AND OTHER METAL IONS: ACCOMMODATING CHANGES IN THE RNA JRNL TITL 3 STRUCTURE AND THE PRESENCE OF A G(SYN)-G(SYN) PAIR. JRNL REF RNA V. 29 44 2022 JRNL REFN ESSN 1469-9001 JRNL PMID 36319090 JRNL DOI 10.1261/RNA.079414.122 REMARK 2 REMARK 2 RESOLUTION. 2.26 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.26 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.01 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 25591 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1274 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.0100 - 4.7000 0.98 2673 144 0.1152 0.1276 REMARK 3 2 4.7000 - 3.7300 1.00 2708 140 0.1425 0.2575 REMARK 3 3 3.7300 - 3.2600 1.00 2708 133 0.2149 0.2492 REMARK 3 4 3.2600 - 2.9600 1.00 2710 147 0.2108 0.2552 REMARK 3 5 2.9600 - 2.7500 1.00 2698 145 0.2569 0.2647 REMARK 3 6 2.7500 - 2.5900 1.00 2726 135 0.2760 0.3546 REMARK 3 7 2.5900 - 2.4600 1.00 2688 143 0.2843 0.3304 REMARK 3 8 2.4600 - 2.3500 1.00 2709 146 0.2828 0.3690 REMARK 3 9 2.3500 - 2.2600 1.00 2697 141 0.2946 0.3221 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.263 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.236 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2598 REMARK 3 ANGLE : 1.062 4038 REMARK 3 CHIRALITY : 0.041 538 REMARK 3 PLANARITY : 0.006 110 REMARK 3 DIHEDRAL : 10.559 1278 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8AMG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1292123878. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.895 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : M REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25605 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.260 REMARK 200 RESOLUTION RANGE LOW (A) : 42.010 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.26 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.70200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.930 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTO-RICKSHAW REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.08 M NACL 0.02 M BACL2 0.04 M REMARK 280 CACODYLATE SODIUM 45% MPD 0.012 M SPERMINE, PH 6.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 92.64400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.32200 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 69.48300 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 23.16100 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 115.80500 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 92.64400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 46.32200 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 23.16100 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 69.48300 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 115.80500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O2' G H 5 O2' U L 9 12554 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 G F 5 O4' - C1' - N9 ANGL. DEV. = 4.4 DEGREES REMARK 500 G L 5 O4' - C1' - N9 ANGL. DEV. = 4.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BA A 101 BA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G A 3 O6 REMARK 620 2 U A 4 O4 71.9 REMARK 620 3 HOH A 203 O 66.0 128.4 REMARK 620 4 HOH A 206 O 75.7 65.0 76.5 REMARK 620 5 G B 5 O6 138.3 96.2 135.3 136.2 REMARK 620 6 G B 6 O6 65.8 83.1 104.6 136.1 73.3 REMARK 620 7 HOH B 202 O 99.6 154.4 63.8 137.7 73.9 71.5 REMARK 620 8 HOH B 204 O 131.9 64.2 131.2 68.9 67.4 124.2 128.5 REMARK 620 9 HOH B 207 O 135.3 141.0 69.3 92.2 78.5 130.0 61.3 78.5 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BA B 101 BA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G A 5 O6 REMARK 620 2 G A 6 O6 79.6 REMARK 620 3 HOH A 201 O 64.6 70.9 REMARK 620 4 HOH A 205 O 72.0 145.5 79.4 REMARK 620 5 G B 3 O6 144.7 66.0 95.4 135.6 REMARK 620 6 U B 4 O4 112.0 78.5 149.4 130.1 70.0 REMARK 620 7 G B 5 O6 56.8 68.5 112.5 109.2 113.4 55.3 REMARK 620 8 HOH B 203 O 126.3 108.1 68.4 75.4 62.0 121.6 175.4 REMARK 620 9 HOH B 204 O 79.8 124.6 138.4 69.3 126.1 63.1 57.2 125.4 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BA C 101 BA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G C 3 O6 REMARK 620 2 U C 4 O4 72.4 REMARK 620 3 HOH C 203 O 66.6 60.5 REMARK 620 4 G D 5 O6 129.7 110.5 160.5 REMARK 620 5 G D 6 O6 54.2 80.5 116.4 76.2 REMARK 620 6 HOH D 101 O 87.3 150.4 130.7 66.2 70.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BA C 102 BA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G C 5 O6 REMARK 620 2 G C 6 O6 81.8 REMARK 620 3 HOH C 202 O 67.9 70.6 REMARK 620 4 HOH C 204 O 79.6 142.5 129.3 REMARK 620 5 HOH C 205 O 64.9 132.7 66.4 64.9 REMARK 620 6 G D 3 O6 145.1 63.5 95.4 130.7 137.9 REMARK 620 7 U D 4 O4 102.5 80.4 150.3 72.4 136.9 76.6 REMARK 620 8 HOH D 102 O 60.0 100.4 127.9 42.2 91.2 127.3 50.9 REMARK 620 9 HOH D 104 O 123.8 121.4 73.5 96.0 62.9 75.8 129.7 138.1 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BA E 102 BA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G E 3 O6 REMARK 620 2 U E 4 O4 75.4 REMARK 620 3 HOH E 202 O 63.3 124.7 REMARK 620 4 HOH E 203 O 76.2 61.8 73.5 REMARK 620 5 G F 5 O6 137.6 106.9 128.3 143.4 REMARK 620 6 G F 6 O6 65.6 83.9 108.3 134.1 72.5 REMARK 620 7 HOH F 101 O 127.2 152.0 66.4 104.1 69.0 118.9 REMARK 620 8 HOH F 103 O 134.0 68.5 117.5 62.2 81.3 134.2 83.6 REMARK 620 9 HOH F 105 O 87.6 155.1 58.9 131.9 73.8 72.5 52.3 134.6 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BA E 101 BA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G E 5 O6 REMARK 620 2 G E 6 O6 79.1 REMARK 620 3 HOH E 201 O 74.1 67.4 REMARK 620 4 HOH E 206 O 73.5 146.3 86.3 REMARK 620 5 G F 3 O6 143.7 64.7 88.9 138.4 REMARK 620 6 U F 4 O4 101.3 81.9 149.3 122.1 77.2 REMARK 620 7 HOH F 102 O 135.1 109.6 69.8 78.4 61.3 123.3 REMARK 620 8 HOH F 103 O 74.9 121.9 144.8 69.0 126.3 54.6 125.5 REMARK 620 9 HOH F 106 O 136.6 139.8 130.1 73.3 78.7 74.2 61.8 67.5 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BA H 101 BA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G G 3 O6 REMARK 620 2 U G 4 O4 74.3 REMARK 620 3 HOH G 101 O 126.7 61.2 REMARK 620 4 HOH G 104 O 78.0 71.9 61.9 REMARK 620 5 HOH G 105 O 72.6 134.3 119.6 71.0 REMARK 620 6 G H 5 O6 146.6 101.0 73.8 132.9 123.9 REMARK 620 7 G H 5 O6 142.4 96.2 73.8 134.5 129.1 5.7 REMARK 620 8 G H 6 O6 64.5 75.8 124.4 135.7 115.6 82.2 77.9 REMARK 620 9 HOH H 201 O 86.1 150.2 145.8 126.4 55.3 83.0 85.6 75.5 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BA H 102 BA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G G 5 O6 REMARK 620 2 G G 6 O6 68.4 REMARK 620 3 HOH G 101 O 85.5 125.9 REMARK 620 4 HOH G 102 O 68.4 79.5 134.1 REMARK 620 5 HOH G 106 O 83.2 140.6 75.8 64.6 REMARK 620 6 G H 3 O6 129.5 62.0 131.7 93.1 132.0 REMARK 620 7 U H 4 O4 106.5 72.7 70.8 151.3 144.1 67.8 REMARK 620 8 G H 5 O6 51.8 69.0 57.8 118.9 114.0 114.0 56.9 REMARK 620 9 HOH H 203 O 161.8 124.8 76.4 123.4 90.0 66.8 70.0 117.6 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BA J 101 BA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G I 3 O6 REMARK 620 2 U I 4 O4 64.1 REMARK 620 3 HOH I 203 O 75.4 126.0 REMARK 620 4 G J 5 O6 147.0 110.9 122.3 REMARK 620 5 G J 5 O6 151.7 112.3 120.1 4.7 REMARK 620 6 G J 6 O6 73.8 75.0 126.6 73.5 78.2 REMARK 620 7 HOH J 201 O 97.6 143.5 72.8 66.6 68.4 69.4 REMARK 620 8 HOH J 203 O 126.9 65.2 126.4 68.0 65.6 107.0 133.4 REMARK 620 9 HOH J 205 O 133.0 128.2 61.6 77.3 72.9 148.2 87.8 72.6 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BA I 101 BA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G I 5 O6 REMARK 620 2 G I 6 O6 76.8 REMARK 620 3 HOH I 201 O 74.6 141.8 REMARK 620 4 G J 3 O6 138.9 63.2 134.0 REMARK 620 5 U J 4 O4 110.0 80.2 133.6 73.4 REMARK 620 6 G J 5 O6 56.6 71.4 111.4 114.1 53.4 REMARK 620 7 HOH J 202 O 142.7 130.5 87.0 76.3 61.2 103.6 REMARK 620 8 HOH J 203 O 67.3 124.8 64.6 144.9 74.8 54.1 75.6 REMARK 620 9 HOH J 204 O 123.9 116.0 63.3 70.7 125.6 172.5 71.5 118.6 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BA K 101 BA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G K 3 O6 REMARK 620 2 U K 4 O4 66.7 REMARK 620 3 G K 5 O6 108.4 47.7 REMARK 620 4 HOH K 203 O 129.0 66.6 47.0 REMARK 620 5 G L 5 O6 141.8 108.1 61.0 73.2 REMARK 620 6 G L 6 O6 64.9 82.6 79.9 126.6 77.0 REMARK 620 7 HOH L 103 O 89.3 152.4 138.8 140.4 81.9 74.6 REMARK 620 8 HOH L 104 O 115.7 121.7 120.7 74.3 99.4 154.7 80.1 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BA K 102 BA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G K 5 O6 REMARK 620 2 G K 6 O6 106.1 REMARK 620 3 HOH K 201 O 56.8 162.8 REMARK 620 4 HOH K 203 O 60.7 122.0 54.7 REMARK 620 5 HOH K 204 O 68.1 88.3 82.8 125.6 REMARK 620 6 G L 3 O6 166.2 62.1 134.4 130.6 103.0 REMARK 620 7 U L 4 O4 111.2 69.4 117.0 66.1 156.8 72.6 REMARK 620 8 HOH L 101 O 119.2 105.6 83.3 130.9 62.5 61.5 128.2 REMARK 620 9 HOH L 102 O 120.9 125.1 71.0 67.7 133.0 72.9 68.5 76.0 REMARK 620 N 1 2 3 4 5 6 7 8 DBREF 8AMG A 1 9 PDB 8AMG 8AMG 1 9 DBREF 8AMG B 1 9 PDB 8AMG 8AMG 1 9 DBREF 8AMG C 1 9 PDB 8AMG 8AMG 1 9 DBREF 8AMG D 1 9 PDB 8AMG 8AMG 1 9 DBREF 8AMG E 1 9 PDB 8AMG 8AMG 1 9 DBREF 8AMG F 1 9 PDB 8AMG 8AMG 1 9 DBREF 8AMG G 1 9 PDB 8AMG 8AMG 1 9 DBREF 8AMG H 1 9 PDB 8AMG 8AMG 1 9 DBREF 8AMG I 1 9 PDB 8AMG 8AMG 1 9 DBREF 8AMG J 1 9 PDB 8AMG 8AMG 1 9 DBREF 8AMG K 1 9 PDB 8AMG 8AMG 1 9 DBREF 8AMG L 1 9 PDB 8AMG 8AMG 1 9 SEQRES 1 A 9 A U G U G G C A U SEQRES 1 B 9 A U G U G G C A U SEQRES 1 C 9 A U G U G G C A U SEQRES 1 D 9 A U G U G G C A U SEQRES 1 E 9 A U G U G G C A U SEQRES 1 F 9 A U G U G G C A U SEQRES 1 G 9 A U G U G G C A U SEQRES 1 H 9 A U G U G G C A U SEQRES 1 I 9 A U G U G G C A U SEQRES 1 J 9 A U G U G G C A U SEQRES 1 K 9 A U G U G G C A U SEQRES 1 L 9 A U G U G G C A U HET BA A 101 1 HET BA B 101 1 HET BA C 101 1 HET BA C 102 1 HET BA E 101 1 HET BA E 102 1 HET BA H 101 1 HET BA H 102 1 HET BA I 101 1 HET BA J 101 1 HET BA K 101 1 HET BA K 102 1 HETNAM BA BARIUM ION FORMUL 13 BA 12(BA 2+) FORMUL 25 HOH *66(H2 O) LINK O6 G A 3 BA BA A 101 1555 1555 2.66 LINK O4 U A 4 BA BA A 101 1555 1555 3.00 LINK O6 G A 5 BA BA B 101 1555 1555 3.01 LINK O6 G A 6 BA BA B 101 1555 1555 2.78 LINK BA BA A 101 O HOH A 203 1555 1555 2.97 LINK BA BA A 101 O HOH A 206 1555 1555 2.72 LINK BA BA A 101 O6 G B 5 1555 1555 2.70 LINK BA BA A 101 O6 G B 6 1555 1555 2.69 LINK BA BA A 101 O HOH B 202 1555 1555 2.58 LINK BA BA A 101 O HOH B 204 1555 1555 2.63 LINK BA BA A 101 O HOH B 207 1555 1555 2.72 LINK O HOH A 201 BA BA B 101 1555 1555 2.70 LINK O HOH A 205 BA BA B 101 1555 1555 2.54 LINK O6 G B 3 BA BA B 101 1555 1555 2.87 LINK O4 U B 4 BA BA B 101 1555 1555 2.94 LINK O6 G B 5 BA BA B 101 1555 1555 3.30 LINK BA BA B 101 O HOH B 203 1555 1555 2.77 LINK BA BA B 101 O HOH B 204 1555 1555 2.81 LINK BA BA B 101 O HOH B 205 1555 1555 2.77 LINK O6 G C 3 BA BA C 101 1555 1555 3.13 LINK O4 U C 4 BA BA C 101 1555 1555 3.03 LINK O6 G C 5 BA BA C 102 1555 1555 2.63 LINK O6 G C 6 BA BA C 102 1555 1555 3.09 LINK BA BA C 101 O HOH C 203 1555 1555 2.63 LINK BA BA C 101 O6 G D 5 1555 1555 2.87 LINK BA BA C 101 O6 G D 6 1555 1555 3.08 LINK BA BA C 101 O HOH D 101 1555 1555 2.84 LINK BA BA C 102 O HOH C 202 1555 1555 2.94 LINK BA BA C 102 O HOH C 204 1555 1555 3.35 LINK BA BA C 102 O HOH C 205 1555 1555 3.00 LINK BA BA C 102 O6 G D 3 1555 1555 2.75 LINK BA BA C 102 O4 U D 4 1555 1555 2.84 LINK BA BA C 102 O HOH D 102 1555 1555 2.78 LINK BA BA C 102 O HOH D 104 1555 1555 2.98 LINK BA BA C 102 O HOH D 105 1555 1555 2.58 LINK O6 G E 3 BA BA E 102 1555 1555 2.67 LINK O4 U E 4 BA BA E 102 1555 1555 2.94 LINK O6 G E 5 BA BA E 101 1555 1555 2.60 LINK O6 G E 6 BA BA E 101 1555 1555 2.89 LINK BA BA E 101 O HOH E 201 1555 1555 2.84 LINK BA BA E 101 O HOH E 206 1555 1555 3.00 LINK BA BA E 101 O6 G F 3 1555 1555 2.64 LINK BA BA E 101 O4 U F 4 1555 1555 2.75 LINK BA BA E 101 O HOH F 102 1555 1555 2.70 LINK BA BA E 101 O HOH F 103 1555 1555 3.05 LINK BA BA E 101 O HOH F 106 1555 1555 2.63 LINK BA BA E 102 O HOH E 202 1555 1555 2.97 LINK BA BA E 102 O HOH E 203 1555 1555 2.80 LINK BA BA E 102 O6 G F 5 1555 1555 2.90 LINK BA BA E 102 O6 G F 6 1555 1555 2.70 LINK BA BA E 102 O HOH F 101 1555 1555 2.77 LINK BA BA E 102 O HOH F 103 1555 1555 2.86 LINK BA BA E 102 O HOH F 105 1555 1555 2.51 LINK O6 G G 3 BA BA H 101 1555 1555 2.74 LINK O4 U G 4 BA BA H 101 1555 1555 2.71 LINK O6 G G 5 BA BA H 102 1555 1555 3.13 LINK O6 G G 6 BA BA H 102 1555 1555 3.11 LINK O HOH G 101 BA BA H 101 1555 1555 2.68 LINK O HOH G 101 BA BA H 102 1555 1555 2.95 LINK O HOH G 102 BA BA H 102 1555 1555 2.73 LINK O HOH G 104 BA BA H 101 1555 1555 2.64 LINK O HOH G 105 BA BA H 101 1555 1555 2.97 LINK O HOH G 106 BA BA H 102 1555 1555 3.09 LINK O6 G H 3 BA BA H 102 1555 1555 2.91 LINK O4 U H 4 BA BA H 102 1555 1555 2.67 LINK O6 A G H 5 BA BA H 101 1555 1555 2.89 LINK O6 B G H 5 BA BA H 101 1555 1555 2.56 LINK O6 B G H 5 BA BA H 102 1555 1555 3.49 LINK O6 G H 6 BA BA H 101 1555 1555 2.95 LINK BA BA H 101 O HOH H 201 1555 1555 2.99 LINK BA BA H 101 O HOH H 202 1555 1555 2.73 LINK BA BA H 102 O HOH H 203 1555 1555 2.65 LINK BA BA H 102 O HOH H 204 1555 1555 2.80 LINK O6 G I 3 BA BA J 101 1555 1555 2.60 LINK O4 U I 4 BA BA J 101 1555 1555 2.79 LINK O6 G I 5 BA BA I 101 1555 1555 2.55 LINK O6 G I 6 BA BA I 101 1555 1555 2.83 LINK BA BA I 101 O HOH I 201 1555 1555 2.92 LINK BA BA I 101 O6 G J 3 1555 1555 2.87 LINK BA BA I 101 O4 U J 4 1555 1555 2.80 LINK BA BA I 101 O6 B G J 5 1555 1555 3.49 LINK BA BA I 101 O HOH J 202 1555 1555 2.75 LINK BA BA I 101 O HOH J 203 1555 1555 2.67 LINK BA BA I 101 O HOH J 204 1555 1555 2.60 LINK O HOH I 203 BA BA J 101 1555 1555 2.73 LINK O6 A G J 5 BA BA J 101 1555 1555 3.17 LINK O6 B G J 5 BA BA J 101 1555 1555 2.73 LINK O6 G J 6 BA BA J 101 1555 1555 2.82 LINK BA BA J 101 O HOH J 201 1555 1555 2.73 LINK BA BA J 101 O HOH J 203 1555 1555 2.61 LINK BA BA J 101 O HOH J 205 1555 1555 2.93 LINK O6 G K 3 BA BA K 101 1555 1555 2.93 LINK O4 U K 4 BA BA K 101 1555 1555 2.81 LINK O6 G K 5 BA BA K 101 1555 1555 3.49 LINK O6 G K 5 BA BA K 102 1555 1555 2.62 LINK O6 G K 6 BA BA K 102 1555 1555 2.70 LINK BA BA K 101 O HOH K 203 1555 1555 2.85 LINK BA BA K 101 O6 G L 5 1555 1555 2.71 LINK BA BA K 101 O6 G L 6 1555 1555 2.80 LINK BA BA K 101 O HOH L 103 1555 1555 2.55 LINK BA BA K 101 O HOH L 104 1555 1555 3.04 LINK BA BA K 102 O HOH K 201 1555 1555 2.59 LINK BA BA K 102 O HOH K 203 1555 1555 2.51 LINK BA BA K 102 O HOH K 204 1555 1555 2.71 LINK BA BA K 102 O6 G L 3 1555 1555 2.63 LINK BA BA K 102 O4 U L 4 1555 1555 2.87 LINK BA BA K 102 O HOH L 101 1555 1555 2.88 LINK BA BA K 102 O HOH L 102 1555 1555 3.10 CRYST1 84.014 84.014 138.966 90.00 90.00 120.00 P 65 2 2 144 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011903 0.006872 0.000000 0.00000 SCALE2 0.000000 0.013744 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007196 0.00000