HEADER HYDROLASE 12-AUG-22 8AQF TITLE CRYSTAL STRUCTURE OF HUMAN MONOGLYCERIDE LIPASE WITH COMPOUND LEI-515 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MONOGLYCERIDE LIPASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MGL,HU-K5,LYSOPHOSPHOLIPASE HOMOLOG,LYSOPHOSPHOLIPASE-LIKE, COMPND 5 MONOACYLGLYCEROL LIPASE,MAGL; COMPND 6 EC: 3.1.1.23; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MGLL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MONOACYLGLYCEROL LIPASE, MAGL, INHIBITOR, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.JIANG,M.HUIZENGA,J.WIRT,J.PALOCZI,A.AMEDI,R.VAN DER BERG,J.BENZ, AUTHOR 2 L.COLLIN,H.DENG,W.DRIEVER,B.FLOREA,U.GRETHER,A.JANSSEN,L.HEITMAN, AUTHOR 3 T.W.LAM,F.MOHR,A.PAVLOVIC,I.RUF,H.RUTJES,F.STEVENS,D.VAN DER VLIET, AUTHOR 4 T.VAN DER WEL,M.WITTWER,C.BOECKEL,P.PACHER,A.HOHMANN,M.VAN DER STELT REVDAT 1 23-AUG-23 8AQF 0 JRNL AUTH M.JIANG,M.VAN DER STELT JRNL TITL DISCOVERY OF A PERIPHERAL RESTRICTED, REVERSIBLE JRNL TITL 2 MONOACYLGLYCEROL LIPASE INHIBITOR THAT REDUCES LIVER INJURY JRNL TITL 3 AND CHEMOTHERAPY-INDUCED NEUROPATHY JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 51370 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.178 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.812 REMARK 3 FREE R VALUE TEST SET COUNT : 2472 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3528 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.09 REMARK 3 BIN R VALUE (WORKING SET) : 0.3580 REMARK 3 BIN FREE R VALUE SET COUNT : 194 REMARK 3 BIN FREE R VALUE : 0.3620 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2238 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.71100 REMARK 3 B22 (A**2) : -2.04800 REMARK 3 B33 (A**2) : -0.66300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.064 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.065 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.062 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.972 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.979 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.975 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2403 ; 0.017 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2315 ; 0.001 ; 0.015 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3286 ; 2.019 ; 1.634 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5351 ; 1.530 ; 1.585 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 316 ; 6.378 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 110 ;30.594 ;21.727 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 407 ;14.443 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;17.641 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 306 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2707 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 531 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 521 ; 0.222 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 40 ; 0.169 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1178 ; 0.176 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 235 ; 0.198 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1186 ; 1.875 ; 2.162 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1185 ; 1.872 ; 2.160 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1489 ; 2.637 ; 3.234 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1490 ; 2.638 ; 3.236 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1217 ; 2.786 ; 2.457 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1218 ; 2.785 ; 2.458 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1784 ; 4.304 ; 3.573 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1785 ; 4.303 ; 3.573 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 295 REMARK 3 ORIGIN FOR THE GROUP (A): 120.3284 19.9573 -0.7198 REMARK 3 T TENSOR REMARK 3 T11: 0.0036 T22: 0.0601 REMARK 3 T33: 0.0783 T12: 0.0028 REMARK 3 T13: 0.0057 T23: 0.0078 REMARK 3 L TENSOR REMARK 3 L11: 0.1798 L22: 1.3934 REMARK 3 L33: 1.0209 L12: -0.1824 REMARK 3 L13: 0.0036 L23: -0.0210 REMARK 3 S TENSOR REMARK 3 S11: -0.0142 S12: -0.0072 S13: 0.0111 REMARK 3 S21: 0.0005 S22: -0.0340 S23: -0.0560 REMARK 3 S31: 0.0466 S32: 0.0594 S33: 0.0482 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8AQF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1292124933. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-FEB-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00009 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SADABS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51415 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 45.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.620 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06310 REMARK 200 FOR THE DATA SET : 11.6900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.65 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.78850 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3PE6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES PH 6.5, 6 TO 13% PEG MME5K, REMARK 280 12% ISOPROPANOL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.17900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 30.17900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 45.81250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 63.78400 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 45.81250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 63.78400 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 30.17900 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 45.81250 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 63.78400 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 30.17900 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 45.81250 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 63.78400 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 GLU A 3 REMARK 465 GLU A 4 REMARK 465 SER A 5 REMARK 465 SER A 6 REMARK 465 THR A 296 REMARK 465 ALA A 297 REMARK 465 GLY A 298 REMARK 465 THR A 299 REMARK 465 ALA A 300 REMARK 465 SER A 301 REMARK 465 PRO A 302 REMARK 465 PRO A 303 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 122 C18 NUX A 401 1.61 REMARK 500 O HOH A 708 O HOH A 802 1.86 REMARK 500 O HOH A 720 O HOH A 752 2.09 REMARK 500 O HOH A 738 O HOH A 817 2.19 REMARK 500 O HOH A 630 O HOH A 751 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PHE A 31 C PHE A 31 O 0.127 REMARK 500 GLU A 59 CD GLU A 59 OE2 -0.077 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 7 N - CA - CB ANGL. DEV. = 7.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 13 4.27 88.90 REMARK 500 GLU A 53 -156.37 -103.15 REMARK 500 ASP A 69 32.09 70.87 REMARK 500 SER A 122 -128.99 58.56 REMARK 500 PRO A 178 152.86 -46.93 REMARK 500 ALA A 203 164.00 -46.51 REMARK 500 TYR A 268 -156.90 -88.23 REMARK 500 LYS A 273 44.79 -143.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 819 DISTANCE = 6.67 ANGSTROMS REMARK 525 HOH A 820 DISTANCE = 6.77 ANGSTROMS DBREF 8AQF A 1 303 UNP Q99685 MGLL_HUMAN 1 303 SEQADV 8AQF MET A -19 UNP Q99685 INITIATING METHIONINE SEQADV 8AQF GLY A -18 UNP Q99685 EXPRESSION TAG SEQADV 8AQF SER A -17 UNP Q99685 EXPRESSION TAG SEQADV 8AQF SER A -16 UNP Q99685 EXPRESSION TAG SEQADV 8AQF HIS A -15 UNP Q99685 EXPRESSION TAG SEQADV 8AQF HIS A -14 UNP Q99685 EXPRESSION TAG SEQADV 8AQF HIS A -13 UNP Q99685 EXPRESSION TAG SEQADV 8AQF HIS A -12 UNP Q99685 EXPRESSION TAG SEQADV 8AQF HIS A -11 UNP Q99685 EXPRESSION TAG SEQADV 8AQF HIS A -10 UNP Q99685 EXPRESSION TAG SEQADV 8AQF SER A -9 UNP Q99685 EXPRESSION TAG SEQADV 8AQF SER A -8 UNP Q99685 EXPRESSION TAG SEQADV 8AQF GLY A -7 UNP Q99685 EXPRESSION TAG SEQADV 8AQF GLU A -6 UNP Q99685 EXPRESSION TAG SEQADV 8AQF ASN A -5 UNP Q99685 EXPRESSION TAG SEQADV 8AQF LEU A -4 UNP Q99685 EXPRESSION TAG SEQADV 8AQF TYR A -3 UNP Q99685 EXPRESSION TAG SEQADV 8AQF PHE A -2 UNP Q99685 EXPRESSION TAG SEQADV 8AQF GLN A -1 UNP Q99685 EXPRESSION TAG SEQADV 8AQF GLY A 0 UNP Q99685 EXPRESSION TAG SEQADV 8AQF ALA A 36 UNP Q99685 LYS 36 ENGINEERED MUTATION SEQADV 8AQF SER A 169 UNP Q99685 LEU 169 ENGINEERED MUTATION SEQADV 8AQF SER A 176 UNP Q99685 LEU 176 ENGINEERED MUTATION SEQRES 1 A 323 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 323 GLU ASN LEU TYR PHE GLN GLY MET PRO GLU GLU SER SER SEQRES 3 A 323 PRO ARG ARG THR PRO GLN SER ILE PRO TYR GLN ASP LEU SEQRES 4 A 323 PRO HIS LEU VAL ASN ALA ASP GLY GLN TYR LEU PHE CYS SEQRES 5 A 323 ARG TYR TRP ALA PRO THR GLY THR PRO LYS ALA LEU ILE SEQRES 6 A 323 PHE VAL SER HIS GLY ALA GLY GLU HIS SER GLY ARG TYR SEQRES 7 A 323 GLU GLU LEU ALA ARG MET LEU MET GLY LEU ASP LEU LEU SEQRES 8 A 323 VAL PHE ALA HIS ASP HIS VAL GLY HIS GLY GLN SER GLU SEQRES 9 A 323 GLY GLU ARG MET VAL VAL SER ASP PHE HIS VAL PHE VAL SEQRES 10 A 323 ARG ASP VAL LEU GLN HIS VAL ASP SER MET GLN LYS ASP SEQRES 11 A 323 TYR PRO GLY LEU PRO VAL PHE LEU LEU GLY HIS SER MET SEQRES 12 A 323 GLY GLY ALA ILE ALA ILE LEU THR ALA ALA GLU ARG PRO SEQRES 13 A 323 GLY HIS PHE ALA GLY MET VAL LEU ILE SER PRO LEU VAL SEQRES 14 A 323 LEU ALA ASN PRO GLU SER ALA THR THR PHE LYS VAL LEU SEQRES 15 A 323 ALA ALA LYS VAL LEU ASN SER VAL LEU PRO ASN LEU SER SEQRES 16 A 323 SER GLY PRO ILE ASP SER SER VAL LEU SER ARG ASN LYS SEQRES 17 A 323 THR GLU VAL ASP ILE TYR ASN SER ASP PRO LEU ILE CYS SEQRES 18 A 323 ARG ALA GLY LEU LYS VAL CYS PHE GLY ILE GLN LEU LEU SEQRES 19 A 323 ASN ALA VAL SER ARG VAL GLU ARG ALA LEU PRO LYS LEU SEQRES 20 A 323 THR VAL PRO PHE LEU LEU LEU GLN GLY SER ALA ASP ARG SEQRES 21 A 323 LEU CYS ASP SER LYS GLY ALA TYR LEU LEU MET GLU LEU SEQRES 22 A 323 ALA LYS SER GLN ASP LYS THR LEU LYS ILE TYR GLU GLY SEQRES 23 A 323 ALA TYR HIS VAL LEU HIS LYS GLU LEU PRO GLU VAL THR SEQRES 24 A 323 ASN SER VAL PHE HIS GLU ILE ASN MET TRP VAL SER GLN SEQRES 25 A 323 ARG THR ALA THR ALA GLY THR ALA SER PRO PRO HET NUX A 401 34 HETNAM NUX 1-[(~{R})-[2-CHLORANYL-4-[(2~{S},3~{S})-4-(3- HETNAM 2 NUX CHLOROPHENYL)-2,3-DIMETHYL-PIPERAZIN-1-YL]CARBONYL- HETNAM 3 NUX PHENYL]SULFINYL]-3,3-BIS(FLUORANYL)PENTAN-2-ONE HETSYN NUX 1-[2-CHLORANYL-4-[(2~{S},3~{S})-4-(3-CHLOROPHENYL)-2,3- HETSYN 2 NUX DIMETHYL-PIPERAZIN-1-YL]CARBONYL-PHENYL]SULFINYL-3,3- HETSYN 3 NUX BIS(FLUORANYL)PENTAN-2-ONE FORMUL 2 NUX C24 H26 CL2 F2 N2 O3 S FORMUL 3 HOH *320(H2 O) HELIX 1 AA1 PRO A 15 LEU A 19 5 5 HELIX 2 AA2 HIS A 54 ARG A 57 5 4 HELIX 3 AA3 TYR A 58 LEU A 68 1 11 HELIX 4 AA4 PHE A 93 TYR A 111 1 19 HELIX 5 AA5 MET A 123 ARG A 135 1 13 HELIX 6 AA6 THR A 157 SER A 169 1 13 HELIX 7 AA7 ASP A 180 LEU A 184 5 5 HELIX 8 AA8 ASN A 187 ASP A 197 1 11 HELIX 9 AA9 LYS A 206 LEU A 224 1 19 HELIX 10 AB1 PRO A 225 LEU A 227 5 3 HELIX 11 AB2 ASP A 243 ALA A 254 1 12 HELIX 12 AB3 VAL A 270 GLU A 274 5 5 HELIX 13 AB4 LEU A 275 ALA A 295 1 21 SHEET 1 AA1 8 HIS A 21 VAL A 23 0 SHEET 2 AA1 8 TYR A 29 TRP A 35 -1 O LEU A 30 N LEU A 22 SHEET 3 AA1 8 LEU A 70 HIS A 75 -1 O VAL A 72 N TRP A 35 SHEET 4 AA1 8 ALA A 43 SER A 48 1 N ALA A 43 O LEU A 71 SHEET 5 AA1 8 VAL A 116 SER A 122 1 O LEU A 119 N SER A 48 SHEET 6 AA1 8 GLY A 141 PRO A 147 1 O VAL A 143 N GLY A 120 SHEET 7 AA1 8 PHE A 231 GLY A 236 1 O LEU A 234 N SER A 146 SHEET 8 AA1 8 LYS A 259 TYR A 264 1 O THR A 260 N LEU A 233 CRYST1 91.625 127.568 60.358 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010914 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007839 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016568 0.00000