HEADER CELL CYCLE 16-AUG-22 8ARF TITLE CRYSTAL STRUCTURE OF THE N-TERMINAL PARALLEL DIMERIC COILED-COIL TITLE 2 REGION OF THE HUMAN KINETOCHORE ASSOCIATED PROTEIN SPINDLY COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN SPINDLY; COMPND 3 CHAIN: B, A; COMPND 4 SYNONYM: HSPINDLY,ARSENITE-RELATED GENE 1 PROTEIN,COILED-COIL DOMAIN- COMPND 5 CONTAINING PROTEIN 99,RHABDOMYOSARCOMA ANTIGEN MU-RMS-40.4A,SPINDLE COMPND 6 APPARATUS COILED-COIL DOMAIN-CONTAINING PROTEIN 1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SPDL1, CCDC99; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINETOCHORE, DYNEIN, DYNACTIN, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR A.PERRAKIS,M.U.AHMAD REVDAT 2 28-SEP-22 8ARF 1 JRNL REVDAT 1 07-SEP-22 8ARF 0 JRNL AUTH E.A.D'AMICO,M.UD DIN AHMAD,V.CMENTOWSKI,M.GIRBIG,F.MULLER, JRNL AUTH 2 S.WOHLGEMUTH,A.BROCKMEYER,S.MAFFINI,P.JANNING,I.R.VETTER, JRNL AUTH 3 A.P.CARTER,A.PERRAKIS,A.MUSACCHIO JRNL TITL CONFORMATIONAL TRANSITIONS OF THE SPINDLY ADAPTOR UNDERLIE JRNL TITL 2 ITS INTERACTION WITH DYNEIN AND DYNACTIN. JRNL REF J.CELL BIOL. V. 221 2022 JRNL REFN ESSN 1540-8140 JRNL PMID 36107127 JRNL DOI 10.1083/JCB.202206131 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.72 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 9068 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.249 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.764 REMARK 3 FREE R VALUE TEST SET COUNT : 432 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 646 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.85 REMARK 3 BIN R VALUE (WORKING SET) : 0.3640 REMARK 3 BIN FREE R VALUE SET COUNT : 22 REMARK 3 BIN FREE R VALUE : 0.3460 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1598 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 92.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.13200 REMARK 3 B22 (A**2) : -3.13200 REMARK 3 B33 (A**2) : 10.15900 REMARK 3 B12 (A**2) : -1.56600 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.600 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.356 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.338 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 42.122 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1606 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1561 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2139 ; 1.887 ; 1.936 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3617 ; 1.381 ; 2.938 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 191 ; 5.471 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 92 ;47.421 ;26.522 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 366 ;28.291 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;24.672 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 236 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1805 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 339 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 397 ; 0.396 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 89 ; 0.259 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 769 ; 0.188 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 21 ; 0.126 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 770 ; 5.383 ; 6.424 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 769 ; 5.334 ; 6.424 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 959 ; 7.724 ; 9.667 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 960 ; 7.730 ; 9.671 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 835 ; 8.894 ; 7.955 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 836 ; 8.889 ; 7.956 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1179 ;14.160 ;11.417 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1180 ;14.154 ;11.418 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 97 REMARK 3 RESIDUE RANGE : B 2 B 98 REMARK 3 ORIGIN FOR THE GROUP (A): -40.0900 36.0440 -11.7890 REMARK 3 T TENSOR REMARK 3 T11: 0.2556 T22: 0.0188 REMARK 3 T33: 0.0334 T12: 0.0271 REMARK 3 T13: 0.0317 T23: 0.0130 REMARK 3 L TENSOR REMARK 3 L11: 0.3263 L22: 12.7628 REMARK 3 L33: 0.1972 L12: 0.2077 REMARK 3 L13: 0.0070 L23: -0.7488 REMARK 3 S TENSOR REMARK 3 S11: 0.0235 S12: -0.0285 S13: 0.0368 REMARK 3 S21: 0.3316 S22: -0.0813 S23: -0.4239 REMARK 3 S31: -0.0293 S32: 0.0446 S33: 0.0577 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8ARF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1292124996. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.966000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9079 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 48.720 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.55800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: CRANK2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BIS-TRIS PROPANE PH 6.5; 19% PEG3350; REMARK 280 0.2M KSCN, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.09467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 16.54733 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 16.54733 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 33.09467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B -1 REMARK 465 PRO B 0 REMARK 465 MET B 1 REMARK 465 SER B 99 REMARK 465 ARG B 100 REMARK 465 GLY A -1 REMARK 465 PRO A 0 REMARK 465 MET A 1 REMARK 465 LEU A 98 REMARK 465 SER A 99 REMARK 465 ARG A 100 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HA GLN A 85 HZ1 LYS A 88 0.75 REMARK 500 C LYS A 84 HE2 LYS A 88 0.76 REMARK 500 C LYS A 84 CE LYS A 88 0.93 REMARK 500 O LYS A 84 CE LYS A 88 1.06 REMARK 500 C LYS A 84 HE3 LYS A 88 1.14 REMARK 500 CA GLN A 85 NZ LYS A 88 1.17 REMARK 500 N GLN A 85 HZ2 LYS A 88 1.17 REMARK 500 O LYS A 84 HE2 LYS A 88 1.20 REMARK 500 O LYS A 84 CD LYS A 88 1.25 REMARK 500 CA GLN A 85 HZ2 LYS A 88 1.25 REMARK 500 HA GLN A 85 NZ LYS A 88 1.26 REMARK 500 N GLN A 85 NZ LYS A 88 1.29 REMARK 500 CA GLN A 85 HZ1 LYS A 88 1.30 REMARK 500 H GLN A 85 HZ2 LYS A 88 1.30 REMARK 500 N GLN A 85 CE LYS A 88 1.36 REMARK 500 O LYS A 84 HE3 LYS A 88 1.38 REMARK 500 O LYS A 84 HD3 LYS A 88 1.38 REMARK 500 N GLN A 85 HE3 LYS A 88 1.46 REMARK 500 CA GLN A 85 CE LYS A 88 2.00 REMARK 500 CB GLN A 85 NZ LYS A 88 2.08 REMARK 500 C LYS A 84 NZ LYS A 88 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS B 93 CD - CE - NZ ANGL. DEV. = 14.7 DEGREES REMARK 500 ARG A 71 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG A 71 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 2 ALA A 3 144.99 REMARK 500 REMARK 500 REMARK: NULL DBREF 8ARF B 1 100 UNP Q96EA4 SPDLY_HUMAN 1 100 DBREF 8ARF A 1 100 UNP Q96EA4 SPDLY_HUMAN 1 100 SEQADV 8ARF GLY B -1 UNP Q96EA4 EXPRESSION TAG SEQADV 8ARF PRO B 0 UNP Q96EA4 EXPRESSION TAG SEQADV 8ARF GLY A -1 UNP Q96EA4 EXPRESSION TAG SEQADV 8ARF PRO A 0 UNP Q96EA4 EXPRESSION TAG SEQRES 1 B 102 GLY PRO MET GLU ALA ASP ILE ILE THR ASN LEU ARG CYS SEQRES 2 B 102 ARG LEU LYS GLU ALA GLU GLU GLU ARG LEU LYS ALA ALA SEQRES 3 B 102 GLN TYR GLY LEU GLN LEU VAL GLU SER GLN ASN GLU LEU SEQRES 4 B 102 GLN ASN GLN LEU ASP LYS CYS ARG ASN GLU MET MET THR SEQRES 5 B 102 MET THR GLU SER TYR GLU GLN GLU LYS TYR THR LEU GLN SEQRES 6 B 102 ARG GLU VAL GLU LEU LYS SER ARG MET LEU GLU SER LEU SEQRES 7 B 102 SER CYS GLU CYS GLU ALA ILE LYS GLN GLN GLN LYS MET SEQRES 8 B 102 HIS LEU GLU LYS LEU GLU GLU GLN LEU SER ARG SEQRES 1 A 102 GLY PRO MET GLU ALA ASP ILE ILE THR ASN LEU ARG CYS SEQRES 2 A 102 ARG LEU LYS GLU ALA GLU GLU GLU ARG LEU LYS ALA ALA SEQRES 3 A 102 GLN TYR GLY LEU GLN LEU VAL GLU SER GLN ASN GLU LEU SEQRES 4 A 102 GLN ASN GLN LEU ASP LYS CYS ARG ASN GLU MET MET THR SEQRES 5 A 102 MET THR GLU SER TYR GLU GLN GLU LYS TYR THR LEU GLN SEQRES 6 A 102 ARG GLU VAL GLU LEU LYS SER ARG MET LEU GLU SER LEU SEQRES 7 A 102 SER CYS GLU CYS GLU ALA ILE LYS GLN GLN GLN LYS MET SEQRES 8 A 102 HIS LEU GLU LYS LEU GLU GLU GLN LEU SER ARG HELIX 1 AA1 GLU B 2 LEU B 98 1 97 HELIX 2 AA2 ASP A 4 GLN A 97 1 94 SSBOND 1 CYS B 44 CYS A 44 1555 1555 2.10 SSBOND 2 CYS B 80 CYS A 80 1555 1555 2.21 CRYST1 112.507 112.507 49.642 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008888 0.005132 0.000000 0.00000 SCALE2 0.000000 0.010263 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020144 0.00000