HEADER OXIDOREDUCTASE 17-AUG-22 8ARU TITLE CRYSTAL STRUCTURE OF HUMAN FORMYLGLYCINE GENERATING ENZYME COMPND MOL_ID: 1; COMPND 2 MOLECULE: FORMYLGLYCINE-GENERATING ENZYME; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FGE,C-ALPHA-FORMYLGLYCINE-GENERATING ENZYME 1,SULFATASE- COMPND 5 MODIFYING FACTOR 1; COMPND 6 EC: 1.8.3.7; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SUMF1, PSEC0152, UNQ3037/PRO9852; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HI5; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PACGP67B-HIS7 KEYWDS FORMYLGLYCINE, MULTIPLE SULFATASE DEFICIENCY, MSD MUTATION, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR P.NEUMANN,A.DICKMANNS,R.FICNER,M.G.RUDOLPH REVDAT 1 23-AUG-23 8ARU 0 JRNL AUTH J.KOWAL,P.NEUMANN,A.DICKMANNS,R.FICNER,L.SCHLOTAWA, JRNL AUTH 2 H.NIEMANN,L.SCHLOTAWA,M.G.RUDOLPH JRNL TITL CRYSTAL STRUCTURE OF HUMAN FORMYLGLYCINE GENERATING ENZYME JRNL TITL 2 E130A MUTANT JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.88 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 72.2 REMARK 3 NUMBER OF REFLECTIONS : 90860 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.142 REMARK 3 R VALUE (WORKING SET) : 0.140 REMARK 3 FREE R VALUE : 0.174 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 4571 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.8800 - 3.3600 0.98 4201 210 0.1303 0.1462 REMARK 3 2 3.3600 - 2.6700 0.99 4090 199 0.1339 0.1601 REMARK 3 3 2.6700 - 2.3300 1.00 4055 212 0.1355 0.1503 REMARK 3 4 2.3300 - 2.1200 1.00 4029 224 0.1210 0.1483 REMARK 3 5 2.1200 - 1.9700 1.00 4025 198 0.1148 0.1420 REMARK 3 6 1.9700 - 1.8500 1.00 3991 224 0.1177 0.1356 REMARK 3 7 1.8500 - 1.7600 1.00 3974 215 0.1203 0.1693 REMARK 3 8 1.7600 - 1.6800 1.00 4005 197 0.1214 0.1393 REMARK 3 9 1.6800 - 1.6200 1.00 3962 223 0.1199 0.1588 REMARK 3 10 1.6200 - 1.5600 1.00 4006 209 0.1204 0.1630 REMARK 3 11 1.5600 - 1.5100 1.00 3970 184 0.1240 0.1748 REMARK 3 12 1.5100 - 1.4700 1.00 3978 214 0.1327 0.1942 REMARK 3 13 1.4700 - 1.4300 1.00 3985 194 0.1474 0.1724 REMARK 3 14 1.4300 - 1.3900 1.00 3948 215 0.1671 0.2464 REMARK 3 15 1.3900 - 1.3600 1.00 3923 218 0.1759 0.2465 REMARK 3 16 1.3600 - 1.3300 0.96 3808 219 0.1841 0.2237 REMARK 3 17 1.3300 - 1.3100 0.87 3444 168 0.1862 0.2527 REMARK 3 18 1.3100 - 1.2800 0.82 3232 174 0.1896 0.2360 REMARK 3 19 1.2800 - 1.2600 0.78 3122 161 0.1965 0.2477 REMARK 3 20 1.2600 - 1.2400 0.72 2787 165 0.2055 0.2367 REMARK 3 21 1.2400 - 1.2200 0.59 2352 104 0.2065 0.2382 REMARK 3 22 1.2200 - 1.2000 0.47 1872 110 0.1935 0.2131 REMARK 3 23 1.2000 - 1.1800 0.39 1533 92 0.1999 0.2666 REMARK 3 24 1.1800 - 1.1700 0.33 1264 88 0.2275 0.2956 REMARK 3 25 1.1700 - 1.1500 0.24 944 56 0.2235 0.2412 REMARK 3 26 1.1500 - 1.1300 0.18 700 39 0.2280 0.2409 REMARK 3 27 1.1300 - 1.1200 0.13 505 31 0.2398 0.2160 REMARK 3 28 1.1200 - 1.1100 0.08 332 17 0.2529 0.2563 REMARK 3 29 1.1100 - 1.0900 0.05 200 9 0.2550 0.4477 REMARK 3 30 1.0900 - 1.0800 0.01 52 2 0.2398 0.6171 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 1.00 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.090 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.360 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 6.58 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8ARU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1292125025. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JAN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 114914 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.080 REMARK 200 RESOLUTION RANGE LOW (A) : 43.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 4.089 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.11 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 1.22100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.690 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1Z70 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 7-8 MG/ML PROTEIN IN 20MM TRIS/HCL REMARK 280 PH8.0 MIXED 1:1 WITH RESERVOIR 0.1M TRIS/HCL PH 8-9, 20-25% REMARK 280 PEG4000, 0.25M CACL2, PH 8.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.78100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.66500 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.78100 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 54.66500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 64 REMARK 465 ASP A 65 REMARK 465 LEU A 66 REMARK 465 GLY A 67 REMARK 465 SER A 68 REMARK 465 SER A 69 REMARK 465 MET A 70 REMARK 465 GLU A 71 REMARK 465 PHE A 72 REMARK 465 GLU A 73 REMARK 465 ALA A 74 REMARK 465 ASN A 75 REMARK 465 ALA A 76 REMARK 465 PRO A 77 REMARK 465 GLY A 78 REMARK 465 PRO A 79 REMARK 465 VAL A 80 REMARK 465 PRO A 81 REMARK 465 GLY A 82 REMARK 465 GLU A 83 REMARK 465 ARG A 84 REMARK 465 GLN A 85 REMARK 465 GLU A 164 REMARK 465 GLN A 165 REMARK 465 VAL A 166 REMARK 465 LYS A 167 REMARK 465 THR A 168 REMARK 465 ASN A 169 REMARK 465 ILE A 170 REMARK 465 GLN A 171 REMARK 465 GLN A 172 REMARK 465 ALA A 173 REMARK 465 VAL A 174 REMARK 465 SER A 375 REMARK 465 GLY A 376 REMARK 465 ARG A 377 REMARK 465 GLY A 378 REMARK 465 SER A 379 REMARK 465 HIS A 380 REMARK 465 HIS A 381 REMARK 465 HIS A 382 REMARK 465 HIS A 383 REMARK 465 HIS A 384 REMARK 465 HIS A 385 REMARK 465 HIS A 386 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 203 O HOH A 501 1.89 REMARK 500 O HOH A 785 O HOH A 796 2.11 REMARK 500 O HOH A 683 O HOH A 882 2.17 REMARK 500 O HOH A 509 O HOH A 773 2.18 REMARK 500 O HOH A 598 O HOH A 860 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 607 O HOH A 716 1455 1.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 336 CB CYS A 336 SG -0.102 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 203 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 260 -162.63 -126.76 REMARK 500 PHE A 284 165.32 73.37 REMARK 500 ASN A 297 -80.46 75.69 REMARK 500 CYS A 341 -76.46 -132.30 REMARK 500 CYS A 341 83.88 -165.28 REMARK 500 TYR A 342 52.03 -90.98 REMARK 500 TYR A 344 32.98 -90.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 915 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A 916 DISTANCE = 6.03 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 259 OD1 REMARK 620 2 ILE A 260 O 100.6 REMARK 620 3 ASP A 273 OD1 93.9 123.4 REMARK 620 4 ASP A 273 OD2 88.0 73.4 52.5 REMARK 620 5 PHE A 275 O 90.7 152.5 80.3 132.5 REMARK 620 6 HOH A 522 O 92.4 75.2 158.6 148.2 79.3 REMARK 620 7 HOH A 563 O 174.0 85.1 84.7 95.7 83.3 86.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 293 O REMARK 620 2 ILE A 294 O 75.7 REMARK 620 3 GLY A 296 O 87.7 112.3 REMARK 620 4 ALA A 298 O 146.3 138.0 79.2 REMARK 620 5 GLU A 300 OE2 77.0 89.1 149.9 99.3 REMARK 620 6 HOH A 633 O 80.4 142.9 94.5 70.0 57.8 REMARK 620 N 1 2 3 4 5 DBREF 8ARU A 73 374 UNP Q8NBK3 SUMF1_HUMAN 73 374 SEQADV 8ARU ALA A 64 UNP Q8NBK3 EXPRESSION TAG SEQADV 8ARU ASP A 65 UNP Q8NBK3 EXPRESSION TAG SEQADV 8ARU LEU A 66 UNP Q8NBK3 EXPRESSION TAG SEQADV 8ARU GLY A 67 UNP Q8NBK3 EXPRESSION TAG SEQADV 8ARU SER A 68 UNP Q8NBK3 EXPRESSION TAG SEQADV 8ARU SER A 69 UNP Q8NBK3 EXPRESSION TAG SEQADV 8ARU MET A 70 UNP Q8NBK3 EXPRESSION TAG SEQADV 8ARU GLU A 71 UNP Q8NBK3 EXPRESSION TAG SEQADV 8ARU PHE A 72 UNP Q8NBK3 EXPRESSION TAG SEQADV 8ARU ALA A 130 UNP Q8NBK3 GLU 130 CONFLICT SEQADV 8ARU SER A 375 UNP Q8NBK3 EXPRESSION TAG SEQADV 8ARU GLY A 376 UNP Q8NBK3 EXPRESSION TAG SEQADV 8ARU ARG A 377 UNP Q8NBK3 EXPRESSION TAG SEQADV 8ARU GLY A 378 UNP Q8NBK3 EXPRESSION TAG SEQADV 8ARU SER A 379 UNP Q8NBK3 EXPRESSION TAG SEQADV 8ARU HIS A 380 UNP Q8NBK3 EXPRESSION TAG SEQADV 8ARU HIS A 381 UNP Q8NBK3 EXPRESSION TAG SEQADV 8ARU HIS A 382 UNP Q8NBK3 EXPRESSION TAG SEQADV 8ARU HIS A 383 UNP Q8NBK3 EXPRESSION TAG SEQADV 8ARU HIS A 384 UNP Q8NBK3 EXPRESSION TAG SEQADV 8ARU HIS A 385 UNP Q8NBK3 EXPRESSION TAG SEQADV 8ARU HIS A 386 UNP Q8NBK3 EXPRESSION TAG SEQRES 1 A 323 ALA ASP LEU GLY SER SER MET GLU PHE GLU ALA ASN ALA SEQRES 2 A 323 PRO GLY PRO VAL PRO GLY GLU ARG GLN LEU ALA HIS SER SEQRES 3 A 323 LYS MET VAL PRO ILE PRO ALA GLY VAL PHE THR MET GLY SEQRES 4 A 323 THR ASP ASP PRO GLN ILE LYS GLN ASP GLY GLU ALA PRO SEQRES 5 A 323 ALA ARG ARG VAL THR ILE ASP ALA PHE TYR MET ASP ALA SEQRES 6 A 323 TYR ALA VAL SER ASN THR GLU PHE GLU LYS PHE VAL ASN SEQRES 7 A 323 SER THR GLY TYR LEU THR GLU ALA GLU LYS PHE GLY ASP SEQRES 8 A 323 SER PHE VAL PHE GLU GLY MET LEU SER GLU GLN VAL LYS SEQRES 9 A 323 THR ASN ILE GLN GLN ALA VAL ALA ALA ALA PRO TRP TRP SEQRES 10 A 323 LEU PRO VAL LYS GLY ALA ASN TRP ARG HIS PRO GLU GLY SEQRES 11 A 323 PRO ASP SER THR ILE LEU HIS ARG PRO ASP HIS PRO VAL SEQRES 12 A 323 LEU HIS VAL SER TRP ASN ASP ALA VAL ALA TYR CYS THR SEQRES 13 A 323 TRP ALA GLY LYS ARG LEU PRO THR GLU ALA GLU TRP GLU SEQRES 14 A 323 TYR SER CYS ARG GLY GLY LEU HIS ASN ARG LEU PHE PRO SEQRES 15 A 323 TRP GLY ASN LYS LEU GLN PRO LYS GLY GLN HIS TYR ALA SEQRES 16 A 323 ASN ILE TRP GLN GLY GLU PHE PRO VAL THR ASN THR GLY SEQRES 17 A 323 GLU ASP GLY PHE GLN GLY THR ALA PRO VAL ASP ALA PHE SEQRES 18 A 323 PRO PRO ASN GLY TYR GLY LEU TYR ASN ILE VAL GLY ASN SEQRES 19 A 323 ALA TRP GLU TRP THR SER ASP TRP TRP THR VAL HIS HIS SEQRES 20 A 323 SER VAL GLU GLU THR LEU ASN PRO LYS GLY PRO PRO SER SEQRES 21 A 323 GLY LYS ASP ARG VAL LYS LYS GLY GLY SER TYR MET CYS SEQRES 22 A 323 HIS ARG SER TYR CYS TYR ARG TYR ARG CYS ALA ALA ARG SEQRES 23 A 323 SER GLN ASN THR PRO ASP SER SER ALA SER ASN LEU GLY SEQRES 24 A 323 PHE ARG CYS ALA ALA ASP ARG LEU PRO THR MET ASP SER SEQRES 25 A 323 GLY ARG GLY SER HIS HIS HIS HIS HIS HIS HIS HET NAG B 1 14 HET NAG B 2 14 HET CA A 401 1 HET CA A 402 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CA CALCIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 3 CA 2(CA 2+) FORMUL 5 HOH *416(H2 O) HELIX 1 AA1 ILE A 108 GLY A 112 5 5 HELIX 2 AA2 SER A 132 GLY A 144 1 13 HELIX 3 AA3 THR A 147 GLY A 153 1 7 HELIX 4 AA4 GLY A 160 LEU A 162 5 3 HELIX 5 AA5 SER A 210 ALA A 221 1 12 HELIX 6 AA6 THR A 227 GLY A 237 1 11 HELIX 7 AA7 GLN A 251 GLN A 255 5 5 SHEET 1 AA1 3 MET A 91 ILE A 94 0 SHEET 2 AA1 3 PHE A 124 ASP A 127 -1 O PHE A 124 N ILE A 94 SHEET 3 AA1 3 ALA A 366 ALA A 367 -1 O ALA A 367 N TYR A 125 SHEET 1 AA2 3 GLY A 97 MET A 101 0 SHEET 2 AA2 3 ARG A 117 ILE A 121 -1 O ILE A 121 N GLY A 97 SHEET 3 AA2 3 THR A 315 LEU A 316 1 O THR A 315 N THR A 120 SHEET 1 AA3 2 ASP A 154 PHE A 158 0 SHEET 2 AA3 2 TRP A 180 LYS A 184 -1 O VAL A 183 N SER A 155 SHEET 1 AA4 2 GLY A 263 GLU A 264 0 SHEET 2 AA4 2 THR A 268 ASN A 269 -1 O THR A 268 N GLU A 264 SHEET 1 AA5 4 SER A 350 ASN A 352 0 SHEET 2 AA5 4 ARG A 327 LYS A 330 -1 N ARG A 327 O ASN A 352 SHEET 3 AA5 4 TRP A 299 TRP A 305 -1 N ASP A 304 O VAL A 328 SHEET 4 AA5 4 LEU A 361 GLY A 362 1 O GLY A 362 N TRP A 299 SSBOND 1 CYS A 218 CYS A 365 1555 1555 2.11 SSBOND 2 CYS A 235 CYS A 346 1555 1555 2.06 SSBOND 3 CYS A 336 CYS A 341 1555 1555 2.03 LINK ND2 ASN A 141 C1 NAG B 1 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK OD1 ASN A 259 CA CA A 402 1555 1555 2.29 LINK O ILE A 260 CA CA A 402 1555 1555 2.34 LINK OD1 ASP A 273 CA CA A 402 1555 1555 2.46 LINK OD2 ASP A 273 CA CA A 402 1555 1555 2.49 LINK O PHE A 275 CA CA A 402 1555 1555 2.35 LINK O ASN A 293 CA CA A 401 1555 1555 2.60 LINK O ILE A 294 CA CA A 401 1555 1555 2.93 LINK O GLY A 296 CA CA A 401 1555 1555 2.66 LINK O ALA A 298 CA CA A 401 1555 1555 2.68 LINK OE2 GLU A 300 CA CA A 401 1555 1555 2.88 LINK CA CA A 401 O HOH A 633 1555 1555 2.86 LINK CA CA A 402 O HOH A 522 1555 1555 2.39 LINK CA CA A 402 O HOH A 563 1555 1555 2.38 CISPEP 1 ALA A 114 PRO A 115 0 -2.93 CISPEP 2 PHE A 265 PRO A 266 0 3.73 CRYST1 43.497 61.562 109.330 90.00 90.00 90.00 P 2 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022990 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016244 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009147 0.00000