HEADER LIPID BINDING PROTEIN 02-SEP-22 8AYI TITLE SCALINDUA BRODAE AMXFABZ H48N MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-HYDROXYACYL-(ACYL-CARRIER-PROTEIN) DEHYDRATASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDATUS SCALINDUA BRODAE; SOURCE 3 ORGANISM_TAXID: 237368; SOURCE 4 GENE: SCABRO_02230; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FATTY ACID BIOSYNTHESIS, LIPID BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.DIETL,T.BARENDS REVDAT 4 07-FEB-24 8AYI 1 REMARK REVDAT 3 26-APR-23 8AYI 1 JRNL REVDAT 2 05-APR-23 8AYI 1 JRNL REVDAT 1 29-MAR-23 8AYI 0 JRNL AUTH A.DIETL,K.WELLACH,P.MAHADEVAN,N.MERTES,S.L.WINTER,T.KUTSCH, JRNL AUTH 2 C.WALZ,I.SCHLICHTING,S.FABRITZ,T.R.M.BARENDS JRNL TITL STRUCTURES OF AN UNUSUAL 3-HYDROXYACYL DEHYDRATASE (FABZ) JRNL TITL 2 FROM A LADDERANE-PRODUCING ORGANISM WITH AN UNEXPECTED JRNL TITL 3 SUBSTRATE PREFERENCE. JRNL REF J.BIOL.CHEM. V. 299 04602 2023 JRNL REFN ESSN 1083-351X JRNL PMID 36907440 JRNL DOI 10.1016/J.JBC.2023.104602 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.58 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 8663 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.249 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 866 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.5800 - 4.0000 0.97 1320 146 0.2200 0.2145 REMARK 3 2 4.0000 - 3.1700 0.99 1300 145 0.2494 0.2850 REMARK 3 3 3.1700 - 2.7700 1.00 1292 144 0.2881 0.3425 REMARK 3 4 2.7700 - 2.5200 1.00 1301 144 0.2959 0.2952 REMARK 3 5 2.5200 - 2.3400 1.00 1290 144 0.3141 0.3433 REMARK 3 6 2.3400 - 2.2000 1.00 1294 143 0.3060 0.2965 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.222 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.491 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 61.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 79.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1031 REMARK 3 ANGLE : 1.387 1393 REMARK 3 CHIRALITY : 0.061 168 REMARK 3 PLANARITY : 0.008 175 REMARK 3 DIHEDRAL : 18.759 379 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 1 THROUGH 141) REMARK 3 ORIGIN FOR THE GROUP (A): -2.0380 21.8901 5.4857 REMARK 3 T TENSOR REMARK 3 T11: 0.5278 T22: 0.6421 REMARK 3 T33: 0.5675 T12: 0.0488 REMARK 3 T13: 0.0791 T23: -0.0652 REMARK 3 L TENSOR REMARK 3 L11: 4.9164 L22: 2.2918 REMARK 3 L33: 0.7785 L12: -2.2585 REMARK 3 L13: -1.2367 L23: 0.2204 REMARK 3 S TENSOR REMARK 3 S11: -0.0502 S12: -0.7684 S13: 0.4622 REMARK 3 S21: -0.1510 S22: 0.4641 S23: -0.2260 REMARK 3 S31: -0.2378 S32: 0.0724 S33: 0.0943 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8AYI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1292125417. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-AUG-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000001 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11349 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.955 REMARK 200 RESOLUTION RANGE LOW (A) : 31.582 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.96 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : 43.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 1.43700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX 1.18.2_3874 REMARK 200 STARTING MODEL: 1U1Z REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0 M SODIUM FORMATE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 52.58000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 30.35708 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 26.46633 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 52.58000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 30.35708 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 26.46633 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 52.58000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 30.35708 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 26.46633 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 52.58000 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 30.35708 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 26.46633 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 52.58000 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 30.35708 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 26.46633 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 52.58000 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 30.35708 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 26.46633 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 60.71415 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 52.93267 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 60.71415 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 52.93267 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 60.71415 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 52.93267 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 60.71415 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 52.93267 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 60.71415 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 52.93267 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 60.71415 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 52.93267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -68.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 74 REMARK 465 PHE A 75 REMARK 465 SER A 76 REMARK 465 THR A 77 REMARK 465 GLU A 78 REMARK 465 GLN A 79 REMARK 465 HIS A 80 REMARK 465 LYS A 81 REMARK 465 ASP A 82 REMARK 465 LYS A 83 REMARK 465 ASN A 142 REMARK 465 LYS A 143 REMARK 465 ASP A 144 REMARK 465 SER A 145 REMARK 465 LEU A 146 REMARK 465 THR A 147 REMARK 465 GLY A 148 REMARK 465 LEU A 149 REMARK 465 GLU A 150 REMARK 465 HIS A 151 REMARK 465 HIS A 152 REMARK 465 HIS A 153 REMARK 465 HIS A 154 REMARK 465 HIS A 155 REMARK 465 HIS A 156 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 29 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 29 C ARG A 30 N -0.175 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER A 29 CA - C - N ANGL. DEV. = 20.6 DEGREES REMARK 500 SER A 29 O - C - N ANGL. DEV. = -18.4 DEGREES REMARK 500 ARG A 30 C - N - CA ANGL. DEV. = 26.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 16 34.74 -94.72 REMARK 500 SER A 29 -69.61 -130.58 REMARK 500 PHE A 48 78.65 57.11 REMARK 500 LYS A 112 156.16 179.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ARG A 30 12.36 REMARK 500 REMARK 500 REMARK: NULL DBREF1 8AYI A 2 141 UNP A0A0B0EHL2_9BACT DBREF2 8AYI A A0A0B0EHL2 3 142 SEQADV 8AYI VAL A 1 UNP A0A0B0EHL EXPRESSION TAG SEQADV 8AYI ASN A 47 UNP A0A0B0EHL HIS 48 ENGINEERED MUTATION SEQADV 8AYI ASN A 142 UNP A0A0B0EHL EXPRESSION TAG SEQADV 8AYI LYS A 143 UNP A0A0B0EHL EXPRESSION TAG SEQADV 8AYI ASP A 144 UNP A0A0B0EHL EXPRESSION TAG SEQADV 8AYI SER A 145 UNP A0A0B0EHL EXPRESSION TAG SEQADV 8AYI LEU A 146 UNP A0A0B0EHL EXPRESSION TAG SEQADV 8AYI THR A 147 UNP A0A0B0EHL EXPRESSION TAG SEQADV 8AYI GLY A 148 UNP A0A0B0EHL EXPRESSION TAG SEQADV 8AYI LEU A 149 UNP A0A0B0EHL EXPRESSION TAG SEQADV 8AYI GLU A 150 UNP A0A0B0EHL EXPRESSION TAG SEQADV 8AYI HIS A 151 UNP A0A0B0EHL EXPRESSION TAG SEQADV 8AYI HIS A 152 UNP A0A0B0EHL EXPRESSION TAG SEQADV 8AYI HIS A 153 UNP A0A0B0EHL EXPRESSION TAG SEQADV 8AYI HIS A 154 UNP A0A0B0EHL EXPRESSION TAG SEQADV 8AYI HIS A 155 UNP A0A0B0EHL EXPRESSION TAG SEQADV 8AYI HIS A 156 UNP A0A0B0EHL EXPRESSION TAG SEQRES 1 A 156 VAL ASN PHE GLU GLU VAL ARG GLU LEU VAL PRO GLN LYS SEQRES 2 A 156 TYR PRO PHE LEU PHE ILE ASP LYS VAL ILE GLU LEU GLN SEQRES 3 A 156 LYS GLU SER ARG ILE VAL CYS LEU LYS ASN ILE SER GLY SEQRES 4 A 156 ASN GLU PRO PHE PHE ALA GLY ASN PHE PRO ASP PHE ALA SEQRES 5 A 156 ILE MET PRO GLY VAL LEU ILE VAL GLU ALA LEU ALA GLN SEQRES 6 A 156 ALA SER ILE ILE LEU PHE LYS LYS SER PHE SER THR GLU SEQRES 7 A 156 GLN HIS LYS ASP LYS VAL PHE LEU LEU ALA SER ALA ASN SEQRES 8 A 156 VAL ARG PHE SER LYS PRO VAL PHE PRO GLY ASP GLN LEU SEQRES 9 A 156 ILE LEU GLU ILE ASP ILE GLU LYS VAL ILE SER SER ALA SEQRES 10 A 156 ALA ILE VAL LYS GLY VAL ALA LYS VAL GLY ASP LYS VAL SEQRES 11 A 156 VAL THR LYS ALA THR LEU SER PHE GLY VAL ALA ASN LYS SEQRES 12 A 156 ASP SER LEU THR GLY LEU GLU HIS HIS HIS HIS HIS HIS FORMUL 2 HOH *6(H2 O) HELIX 1 AA1 ASN A 2 VAL A 10 1 9 HELIX 2 AA2 GLU A 41 ASN A 47 1 7 HELIX 3 AA3 PRO A 55 LYS A 72 1 18 SHEET 1 AA1 6 LYS A 21 GLN A 26 0 SHEET 2 AA1 6 ARG A 30 ASN A 36 -1 O VAL A 32 N GLU A 24 SHEET 3 AA1 6 GLN A 103 VAL A 113 -1 O LEU A 106 N CYS A 33 SHEET 4 AA1 6 ALA A 118 VAL A 126 -1 O LYS A 125 N ILE A 105 SHEET 5 AA1 6 LYS A 129 VAL A 140 -1 O ALA A 134 N GLY A 122 SHEET 6 AA1 6 PHE A 85 PHE A 94 -1 N LEU A 86 O GLY A 139 CISPEP 1 TYR A 14 PRO A 16 0 1.10 CRYST1 105.160 105.160 79.399 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009509 0.005490 0.000000 0.00000 SCALE2 0.000000 0.010980 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012595 0.00000