data_8B0N
#
_entry.id 8B0N
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.373
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 8B0N pdb_00008b0n 10.2210/pdb8b0n/pdb
WWPDB D_1292125449 ? ?
EMDB EMD-15789 ? ?
#
_pdbx_database_related.db_name EMDB
_pdbx_database_related.details
'Cryo-EM structure of apolipoprotein N-acyltransferase Lnt from E. coli in complex with Lyso-PE'
_pdbx_database_related.db_id EMD-15789
_pdbx_database_related.content_type 'associated EM volume'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 8B0N
_pdbx_database_status.recvd_initial_deposition_date 2022-09-07
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site PDBE
_pdbx_database_status.process_site PDBE
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Degtjarik, O.' 1 ?
'Smithers, L.' 2 ?
'Boland, C.' 3 ?
'Caffrey, M.' 4 ?
'Shalev Benami, M.' 5 ?
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country US
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev 'Sci Adv'
_citation.journal_id_ASTM ?
_citation.journal_id_CSD ?
_citation.journal_id_ISSN 2375-2548
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 9
_citation.language ?
_citation.page_first eadf5799
_citation.page_last eadf5799
_citation.title
'Structure snapshots reveal the mechanism of a bacterial membrane lipoprotein N -acyltransferase.'
_citation.year 2023
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.1126/sciadv.adf5799
_citation.pdbx_database_id_PubMed 37390210
_citation.pdbx_database_id_patent ?
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Smithers, L.' 1 0000-0002-4512-9401
primary 'Degtjarik, O.' 2 0000-0002-1492-9481
primary 'Weichert, D.' 3 0000-0002-0694-7671
primary 'Huang, C.Y.' 4 0000-0002-7676-0239
primary 'Boland, C.' 5 0000-0001-6763-3767
primary 'Bowen, K.' 6 0000-0001-9609-4942
primary 'Oluwole, A.' 7 0000-0001-8647-4781
primary 'Lutomski, C.' 8 0000-0001-7509-103X
primary 'Robinson, C.V.' 9 0000-0001-7829-5505
primary 'Scanlan, E.M.' 10 0000-0001-5176-2310
primary 'Wang, M.' 11 0000-0002-5340-3036
primary 'Olieric, V.' 12 0000-0002-0533-7222
primary 'Shalev-Benami, M.' 13 0000-0001-6902-1924
primary 'Caffrey, M.' 14 0000-0002-2931-4551
#
_cell.angle_alpha 90.00
_cell.angle_alpha_esd ?
_cell.angle_beta 90.00
_cell.angle_beta_esd ?
_cell.angle_gamma 90.00
_cell.angle_gamma_esd ?
_cell.entry_id 8B0N
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 1.00
_cell.length_a_esd ?
_cell.length_b 1.00
_cell.length_b_esd ?
_cell.length_c 1.00
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB ?
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
_cell.pdbx_esd_method ?
#
_symmetry.entry_id 8B0N
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 1
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'P 1'
_symmetry.pdbx_full_space_group_name_H-M ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man 'Apolipoprotein N-acyltransferase' 59519.180 1
2.3.1.269 ? ? ?
2 non-polymer syn '[(2~{S})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-oxidanyl-propan-2-yl] (~{Z})-octadec-9-enoate' 479.588 1
? ? ? ?
#
_entity_name_com.entity_id 1
_entity_name_com.name 'ALP N-acyltransferase,Copper homeostasis protein CutE'
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer yes
_entity_poly.pdbx_seq_one_letter_code
;MGSSHHHHHHSSGLVPRGSHMAFASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLMGLQALTFNRRPLQSAAIG
FCWGFGLFGSGINWVYVSIATFGGMPGPVNIFLVVLLAAYLSLYTGLFAGVLSRLWPKTTWLRVAIAAPALWQVTEFLRG
WVLTGFPWLQFGYSQIDGPLKGLAPIMGVEAINFLLMMVSGLLALALVKRNWRPLVVAVVLFALPFPLRYIQWFTPQPEK
TIQVSMVQGDIPQSLKWDEGQLLNTLKIYYNATAPLMGKSSLIIWPESAITDLEINQQPFLKALDGELRDKGSSLVTGIV
DARLNKQNRYDTYNTIITLGKGAPYSYESADRYNKNHLVPFGEFVPLESILRPLAPFFDLPMSSFSRGPYIQPPLSANGI
ELTAAI(P1L)YEIILGEQVRDNFRPDTDYLLTISNDAWFGKSIGPWQHFQMARMRALELARPLLRSTNNGITAVIGPQG
EIQAMIPQFTREVLTTNVTPTTGLTPYARTGNWPLWVLTALFGFAAVLMSLRQRRK
;
_entity_poly.pdbx_seq_one_letter_code_can
;MGSSHHHHHHSSGLVPRGSHMAFASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLMGLQALTFNRRPLQSAAIG
FCWGFGLFGSGINWVYVSIATFGGMPGPVNIFLVVLLAAYLSLYTGLFAGVLSRLWPKTTWLRVAIAAPALWQVTEFLRG
WVLTGFPWLQFGYSQIDGPLKGLAPIMGVEAINFLLMMVSGLLALALVKRNWRPLVVAVVLFALPFPLRYIQWFTPQPEK
TIQVSMVQGDIPQSLKWDEGQLLNTLKIYYNATAPLMGKSSLIIWPESAITDLEINQQPFLKALDGELRDKGSSLVTGIV
DARLNKQNRYDTYNTIITLGKGAPYSYESADRYNKNHLVPFGEFVPLESILRPLAPFFDLPMSSFSRGPYIQPPLSANGI
ELTAAICYEIILGEQVRDNFRPDTDYLLTISNDAWFGKSIGPWQHFQMARMRALELARPLLRSTNNGITAVIGPQGEIQA
MIPQFTREVLTTNVTPTTGLTPYARTGNWPLWVLTALFGFAAVLMSLRQRRK
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET n
1 2 GLY n
1 3 SER n
1 4 SER n
1 5 HIS n
1 6 HIS n
1 7 HIS n
1 8 HIS n
1 9 HIS n
1 10 HIS n
1 11 SER n
1 12 SER n
1 13 GLY n
1 14 LEU n
1 15 VAL n
1 16 PRO n
1 17 ARG n
1 18 GLY n
1 19 SER n
1 20 HIS n
1 21 MET n
1 22 ALA n
1 23 PHE n
1 24 ALA n
1 25 SER n
1 26 LEU n
1 27 ILE n
1 28 GLU n
1 29 ARG n
1 30 GLN n
1 31 ARG n
1 32 ILE n
1 33 ARG n
1 34 LEU n
1 35 LEU n
1 36 LEU n
1 37 ALA n
1 38 LEU n
1 39 LEU n
1 40 PHE n
1 41 GLY n
1 42 ALA n
1 43 CYS n
1 44 GLY n
1 45 THR n
1 46 LEU n
1 47 ALA n
1 48 PHE n
1 49 SER n
1 50 PRO n
1 51 TYR n
1 52 ASP n
1 53 VAL n
1 54 TRP n
1 55 PRO n
1 56 ALA n
1 57 ALA n
1 58 ILE n
1 59 ILE n
1 60 SER n
1 61 LEU n
1 62 MET n
1 63 GLY n
1 64 LEU n
1 65 GLN n
1 66 ALA n
1 67 LEU n
1 68 THR n
1 69 PHE n
1 70 ASN n
1 71 ARG n
1 72 ARG n
1 73 PRO n
1 74 LEU n
1 75 GLN n
1 76 SER n
1 77 ALA n
1 78 ALA n
1 79 ILE n
1 80 GLY n
1 81 PHE n
1 82 CYS n
1 83 TRP n
1 84 GLY n
1 85 PHE n
1 86 GLY n
1 87 LEU n
1 88 PHE n
1 89 GLY n
1 90 SER n
1 91 GLY n
1 92 ILE n
1 93 ASN n
1 94 TRP n
1 95 VAL n
1 96 TYR n
1 97 VAL n
1 98 SER n
1 99 ILE n
1 100 ALA n
1 101 THR n
1 102 PHE n
1 103 GLY n
1 104 GLY n
1 105 MET n
1 106 PRO n
1 107 GLY n
1 108 PRO n
1 109 VAL n
1 110 ASN n
1 111 ILE n
1 112 PHE n
1 113 LEU n
1 114 VAL n
1 115 VAL n
1 116 LEU n
1 117 LEU n
1 118 ALA n
1 119 ALA n
1 120 TYR n
1 121 LEU n
1 122 SER n
1 123 LEU n
1 124 TYR n
1 125 THR n
1 126 GLY n
1 127 LEU n
1 128 PHE n
1 129 ALA n
1 130 GLY n
1 131 VAL n
1 132 LEU n
1 133 SER n
1 134 ARG n
1 135 LEU n
1 136 TRP n
1 137 PRO n
1 138 LYS n
1 139 THR n
1 140 THR n
1 141 TRP n
1 142 LEU n
1 143 ARG n
1 144 VAL n
1 145 ALA n
1 146 ILE n
1 147 ALA n
1 148 ALA n
1 149 PRO n
1 150 ALA n
1 151 LEU n
1 152 TRP n
1 153 GLN n
1 154 VAL n
1 155 THR n
1 156 GLU n
1 157 PHE n
1 158 LEU n
1 159 ARG n
1 160 GLY n
1 161 TRP n
1 162 VAL n
1 163 LEU n
1 164 THR n
1 165 GLY n
1 166 PHE n
1 167 PRO n
1 168 TRP n
1 169 LEU n
1 170 GLN n
1 171 PHE n
1 172 GLY n
1 173 TYR n
1 174 SER n
1 175 GLN n
1 176 ILE n
1 177 ASP n
1 178 GLY n
1 179 PRO n
1 180 LEU n
1 181 LYS n
1 182 GLY n
1 183 LEU n
1 184 ALA n
1 185 PRO n
1 186 ILE n
1 187 MET n
1 188 GLY n
1 189 VAL n
1 190 GLU n
1 191 ALA n
1 192 ILE n
1 193 ASN n
1 194 PHE n
1 195 LEU n
1 196 LEU n
1 197 MET n
1 198 MET n
1 199 VAL n
1 200 SER n
1 201 GLY n
1 202 LEU n
1 203 LEU n
1 204 ALA n
1 205 LEU n
1 206 ALA n
1 207 LEU n
1 208 VAL n
1 209 LYS n
1 210 ARG n
1 211 ASN n
1 212 TRP n
1 213 ARG n
1 214 PRO n
1 215 LEU n
1 216 VAL n
1 217 VAL n
1 218 ALA n
1 219 VAL n
1 220 VAL n
1 221 LEU n
1 222 PHE n
1 223 ALA n
1 224 LEU n
1 225 PRO n
1 226 PHE n
1 227 PRO n
1 228 LEU n
1 229 ARG n
1 230 TYR n
1 231 ILE n
1 232 GLN n
1 233 TRP n
1 234 PHE n
1 235 THR n
1 236 PRO n
1 237 GLN n
1 238 PRO n
1 239 GLU n
1 240 LYS n
1 241 THR n
1 242 ILE n
1 243 GLN n
1 244 VAL n
1 245 SER n
1 246 MET n
1 247 VAL n
1 248 GLN n
1 249 GLY n
1 250 ASP n
1 251 ILE n
1 252 PRO n
1 253 GLN n
1 254 SER n
1 255 LEU n
1 256 LYS n
1 257 TRP n
1 258 ASP n
1 259 GLU n
1 260 GLY n
1 261 GLN n
1 262 LEU n
1 263 LEU n
1 264 ASN n
1 265 THR n
1 266 LEU n
1 267 LYS n
1 268 ILE n
1 269 TYR n
1 270 TYR n
1 271 ASN n
1 272 ALA n
1 273 THR n
1 274 ALA n
1 275 PRO n
1 276 LEU n
1 277 MET n
1 278 GLY n
1 279 LYS n
1 280 SER n
1 281 SER n
1 282 LEU n
1 283 ILE n
1 284 ILE n
1 285 TRP n
1 286 PRO n
1 287 GLU n
1 288 SER n
1 289 ALA n
1 290 ILE n
1 291 THR n
1 292 ASP n
1 293 LEU n
1 294 GLU n
1 295 ILE n
1 296 ASN n
1 297 GLN n
1 298 GLN n
1 299 PRO n
1 300 PHE n
1 301 LEU n
1 302 LYS n
1 303 ALA n
1 304 LEU n
1 305 ASP n
1 306 GLY n
1 307 GLU n
1 308 LEU n
1 309 ARG n
1 310 ASP n
1 311 LYS n
1 312 GLY n
1 313 SER n
1 314 SER n
1 315 LEU n
1 316 VAL n
1 317 THR n
1 318 GLY n
1 319 ILE n
1 320 VAL n
1 321 ASP n
1 322 ALA n
1 323 ARG n
1 324 LEU n
1 325 ASN n
1 326 LYS n
1 327 GLN n
1 328 ASN n
1 329 ARG n
1 330 TYR n
1 331 ASP n
1 332 THR n
1 333 TYR n
1 334 ASN n
1 335 THR n
1 336 ILE n
1 337 ILE n
1 338 THR n
1 339 LEU n
1 340 GLY n
1 341 LYS n
1 342 GLY n
1 343 ALA n
1 344 PRO n
1 345 TYR n
1 346 SER n
1 347 TYR n
1 348 GLU n
1 349 SER n
1 350 ALA n
1 351 ASP n
1 352 ARG n
1 353 TYR n
1 354 ASN n
1 355 LYS n
1 356 ASN n
1 357 HIS n
1 358 LEU n
1 359 VAL n
1 360 PRO n
1 361 PHE n
1 362 GLY n
1 363 GLU n
1 364 PHE n
1 365 VAL n
1 366 PRO n
1 367 LEU n
1 368 GLU n
1 369 SER n
1 370 ILE n
1 371 LEU n
1 372 ARG n
1 373 PRO n
1 374 LEU n
1 375 ALA n
1 376 PRO n
1 377 PHE n
1 378 PHE n
1 379 ASP n
1 380 LEU n
1 381 PRO n
1 382 MET n
1 383 SER n
1 384 SER n
1 385 PHE n
1 386 SER n
1 387 ARG n
1 388 GLY n
1 389 PRO n
1 390 TYR n
1 391 ILE n
1 392 GLN n
1 393 PRO n
1 394 PRO n
1 395 LEU n
1 396 SER n
1 397 ALA n
1 398 ASN n
1 399 GLY n
1 400 ILE n
1 401 GLU n
1 402 LEU n
1 403 THR n
1 404 ALA n
1 405 ALA n
1 406 ILE n
1 407 P1L n
1 408 TYR n
1 409 GLU n
1 410 ILE n
1 411 ILE n
1 412 LEU n
1 413 GLY n
1 414 GLU n
1 415 GLN n
1 416 VAL n
1 417 ARG n
1 418 ASP n
1 419 ASN n
1 420 PHE n
1 421 ARG n
1 422 PRO n
1 423 ASP n
1 424 THR n
1 425 ASP n
1 426 TYR n
1 427 LEU n
1 428 LEU n
1 429 THR n
1 430 ILE n
1 431 SER n
1 432 ASN n
1 433 ASP n
1 434 ALA n
1 435 TRP n
1 436 PHE n
1 437 GLY n
1 438 LYS n
1 439 SER n
1 440 ILE n
1 441 GLY n
1 442 PRO n
1 443 TRP n
1 444 GLN n
1 445 HIS n
1 446 PHE n
1 447 GLN n
1 448 MET n
1 449 ALA n
1 450 ARG n
1 451 MET n
1 452 ARG n
1 453 ALA n
1 454 LEU n
1 455 GLU n
1 456 LEU n
1 457 ALA n
1 458 ARG n
1 459 PRO n
1 460 LEU n
1 461 LEU n
1 462 ARG n
1 463 SER n
1 464 THR n
1 465 ASN n
1 466 ASN n
1 467 GLY n
1 468 ILE n
1 469 THR n
1 470 ALA n
1 471 VAL n
1 472 ILE n
1 473 GLY n
1 474 PRO n
1 475 GLN n
1 476 GLY n
1 477 GLU n
1 478 ILE n
1 479 GLN n
1 480 ALA n
1 481 MET n
1 482 ILE n
1 483 PRO n
1 484 GLN n
1 485 PHE n
1 486 THR n
1 487 ARG n
1 488 GLU n
1 489 VAL n
1 490 LEU n
1 491 THR n
1 492 THR n
1 493 ASN n
1 494 VAL n
1 495 THR n
1 496 PRO n
1 497 THR n
1 498 THR n
1 499 GLY n
1 500 LEU n
1 501 THR n
1 502 PRO n
1 503 TYR n
1 504 ALA n
1 505 ARG n
1 506 THR n
1 507 GLY n
1 508 ASN n
1 509 TRP n
1 510 PRO n
1 511 LEU n
1 512 TRP n
1 513 VAL n
1 514 LEU n
1 515 THR n
1 516 ALA n
1 517 LEU n
1 518 PHE n
1 519 GLY n
1 520 PHE n
1 521 ALA n
1 522 ALA n
1 523 VAL n
1 524 LEU n
1 525 MET n
1 526 SER n
1 527 LEU n
1 528 ARG n
1 529 GLN n
1 530 ARG n
1 531 ARG n
1 532 LYS n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type 'Biological sequence'
_entity_src_gen.pdbx_beg_seq_num 1
_entity_src_gen.pdbx_end_seq_num 532
_entity_src_gen.gene_src_common_name ?
_entity_src_gen.gene_src_genus ?
_entity_src_gen.pdbx_gene_src_gene 'lnt, cutE, b0657, JW0654'
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain K12
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli K-12'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain ?
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type ?
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name ?
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code LNT_ECOLI
_struct_ref.pdbx_db_accession P23930
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code
;MAFASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLMGLQALTFNRRPLQSAAIGFCWGFGLFGSGINWVYVSIA
TFGGMPGPVNIFLVVLLAAYLSLYTGLFAGVLSRLWPKTTWLRVAIAAPALWQVTEFLRGWVLTGFPWLQFGYSQIDGPL
KGLAPIMGVEAINFLLMMVSGLLALALVKRNWRPLVVAVVLFALPFPLRYIQWFTPQPEKTIQVSMVQGDIPQSLKWDEG
QLLNTLKIYYNATAPLMGKSSLIIWPESAITDLEINQQPFLKALDGELRDKGSSLVTGIVDARLNKQNRYDTYNTIITLG
KGAPYSYESADRYNKNHLVPFGEFVPLESILRPLAPFFDLPMSSFSRGPYIQPPLSANGIELTAAICYEIILGEQVRDNF
RPDTDYLLTISNDAWFGKSIGPWQHFQMARMRALELARPLLRSTNNGITAVIGPQGEIQAMIPQFTREVLTTNVTPTTGL
TPYARTGNWPLWVLTALFGFAAVLMSLRQRRK
;
_struct_ref.pdbx_align_begin 1
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 8B0N
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 21
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 532
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession P23930
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 512
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 512
#
loop_
_struct_ref_seq_dif.align_id
_struct_ref_seq_dif.pdbx_pdb_id_code
_struct_ref_seq_dif.mon_id
_struct_ref_seq_dif.pdbx_pdb_strand_id
_struct_ref_seq_dif.seq_num
_struct_ref_seq_dif.pdbx_pdb_ins_code
_struct_ref_seq_dif.pdbx_seq_db_name
_struct_ref_seq_dif.pdbx_seq_db_accession_code
_struct_ref_seq_dif.db_mon_id
_struct_ref_seq_dif.pdbx_seq_db_seq_num
_struct_ref_seq_dif.details
_struct_ref_seq_dif.pdbx_auth_seq_num
_struct_ref_seq_dif.pdbx_ordinal
1 8B0N MET A 1 ? UNP P23930 ? ? 'initiating methionine' -19 1
1 8B0N GLY A 2 ? UNP P23930 ? ? 'expression tag' -18 2
1 8B0N SER A 3 ? UNP P23930 ? ? 'expression tag' -17 3
1 8B0N SER A 4 ? UNP P23930 ? ? 'expression tag' -16 4
1 8B0N HIS A 5 ? UNP P23930 ? ? 'expression tag' -15 5
1 8B0N HIS A 6 ? UNP P23930 ? ? 'expression tag' -14 6
1 8B0N HIS A 7 ? UNP P23930 ? ? 'expression tag' -13 7
1 8B0N HIS A 8 ? UNP P23930 ? ? 'expression tag' -12 8
1 8B0N HIS A 9 ? UNP P23930 ? ? 'expression tag' -11 9
1 8B0N HIS A 10 ? UNP P23930 ? ? 'expression tag' -10 10
1 8B0N SER A 11 ? UNP P23930 ? ? 'expression tag' -9 11
1 8B0N SER A 12 ? UNP P23930 ? ? 'expression tag' -8 12
1 8B0N GLY A 13 ? UNP P23930 ? ? 'expression tag' -7 13
1 8B0N LEU A 14 ? UNP P23930 ? ? 'expression tag' -6 14
1 8B0N VAL A 15 ? UNP P23930 ? ? 'expression tag' -5 15
1 8B0N PRO A 16 ? UNP P23930 ? ? 'expression tag' -4 16
1 8B0N ARG A 17 ? UNP P23930 ? ? 'expression tag' -3 17
1 8B0N GLY A 18 ? UNP P23930 ? ? 'expression tag' -2 18
1 8B0N SER A 19 ? UNP P23930 ? ? 'expression tag' -1 19
1 8B0N HIS A 20 ? UNP P23930 ? ? 'expression tag' 0 20
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ?
'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ?
'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ?
'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ?
'C4 H7 N O4' 133.103
CYS 'L-peptide linking' y CYSTEINE ?
'C3 H7 N O2 S' 121.158
GLN 'L-peptide linking' y GLUTAMINE ?
'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ?
'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ?
'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ?
'C6 H10 N3 O2 1' 156.162
ILE 'L-peptide linking' y ISOLEUCINE ?
'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ?
'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ?
'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ?
'C5 H11 N O2 S' 149.211
OU9 non-polymer . '[(2~{S})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-oxidanyl-propan-2-yl] (~{Z})-octadec-9-enoate' ?
'C23 H46 N O7 P' 479.588
P1L 'L-peptide linking' n S-PALMITOYL-L-CYSTEINE ?
'C19 H37 N O3 S' 359.567
PHE 'L-peptide linking' y PHENYLALANINE ?
'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ?
'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ?
'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ?
'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ?
'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ?
'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ?
'C5 H11 N O2' 117.146
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 8B0N
_exptl.crystals_number ?
_exptl.details ?
_exptl.method 'ELECTRON MICROSCOPY'
_exptl.method_details ?
#
_refine.aniso_B[1][1] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[2][3] ?
_refine.aniso_B[3][3] ?
_refine.B_iso_max ?
_refine.B_iso_mean 74.95
_refine.B_iso_min ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.details ?
_refine.diff_density_max ?
_refine.diff_density_max_esd ?
_refine.diff_density_min ?
_refine.diff_density_min_esd ?
_refine.diff_density_rms ?
_refine.diff_density_rms_esd ?
_refine.entry_id 8B0N
_refine.pdbx_refine_id 'ELECTRON MICROSCOPY'
_refine.ls_abs_structure_details ?
_refine.ls_abs_structure_Flack ?
_refine.ls_abs_structure_Flack_esd ?
_refine.ls_abs_structure_Rogers ?
_refine.ls_abs_structure_Rogers_esd ?
_refine.ls_d_res_high .
_refine.ls_d_res_low ?
_refine.ls_extinction_coef ?
_refine.ls_extinction_coef_esd ?
_refine.ls_extinction_expression ?
_refine.ls_extinction_method ?
_refine.ls_goodness_of_fit_all ?
_refine.ls_goodness_of_fit_all_esd ?
_refine.ls_goodness_of_fit_obs ?
_refine.ls_goodness_of_fit_obs_esd ?
_refine.ls_hydrogen_treatment ?
_refine.ls_matrix_type ?
_refine.ls_number_constraints ?
_refine.ls_number_parameters ?
_refine.ls_number_reflns_all ?
_refine.ls_number_reflns_obs ?
_refine.ls_number_reflns_R_free ?
_refine.ls_number_reflns_R_work ?
_refine.ls_number_restraints ?
_refine.ls_percent_reflns_obs ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_R_factor_all ?
_refine.ls_R_factor_obs ?
_refine.ls_R_factor_R_free ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_R_factor_R_work ?
_refine.ls_R_Fsqd_factor_obs ?
_refine.ls_R_I_factor_obs ?
_refine.ls_redundancy_reflns_all ?
_refine.ls_redundancy_reflns_obs ?
_refine.ls_restrained_S_all ?
_refine.ls_restrained_S_obs ?
_refine.ls_shift_over_esd_max ?
_refine.ls_shift_over_esd_mean ?
_refine.ls_structure_factor_coef ?
_refine.ls_weighting_details ?
_refine.ls_weighting_scheme ?
_refine.ls_wR_factor_all ?
_refine.ls_wR_factor_obs ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.occupancy_max ?
_refine.occupancy_min ?
_refine.solvent_model_details ?
_refine.solvent_model_param_bsol ?
_refine.solvent_model_param_ksol ?
_refine.pdbx_R_complete ?
_refine.ls_R_factor_gt ?
_refine.ls_goodness_of_fit_gt ?
_refine.ls_goodness_of_fit_ref ?
_refine.ls_shift_over_su_max ?
_refine.ls_shift_over_su_max_lt ?
_refine.ls_shift_over_su_mean ?
_refine.ls_shift_over_su_mean_lt ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_ls_sigma_Fsqd ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_ls_cross_valid_method NONE
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_starting_model ?
_refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2'
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_real_space_R ?
_refine.pdbx_density_correlation ?
_refine.pdbx_pd_number_of_powder_patterns ?
_refine.pdbx_pd_number_of_points ?
_refine.pdbx_pd_meas_number_of_points ?
_refine.pdbx_pd_proc_ls_prof_R_factor ?
_refine.pdbx_pd_proc_ls_prof_wR_factor ?
_refine.pdbx_pd_Marquardt_correlation_coeff ?
_refine.pdbx_pd_Fsqrd_R_factor ?
_refine.pdbx_pd_ls_matrix_band_width ?
_refine.pdbx_overall_phase_error ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_diffrn_id ?
_refine.overall_SU_B ?
_refine.overall_SU_ML ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_average_fsc_overall ?
_refine.pdbx_average_fsc_work ?
_refine.pdbx_average_fsc_free ?
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'ELECTRON MICROSCOPY' ? 0.003 ? 4116 ? f_bond_d ? ?
'ELECTRON MICROSCOPY' ? 0.477 ? 5617 ? f_angle_d ? ?
'ELECTRON MICROSCOPY' ? 9.449 ? 1483 ? f_dihedral_angle_d ? ?
'ELECTRON MICROSCOPY' ? 0.042 ? 632 ? f_chiral_restr ? ?
'ELECTRON MICROSCOPY' ? 0.004 ? 706 ? f_plane_restr ? ?
#
_struct.entry_id 8B0N
_struct.title
'Cryo-EM structure of apolipoprotein N-acyltransferase Lnt from E. coli in complex with Lyso-PE'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 8B0N
_struct_keywords.text 'Lnt, apolipoprotein N-acyltransferase, bacterial lipoprotein, transferase, cryo-EM'
_struct_keywords.pdbx_keywords TRANSFERASE
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 AA1 ALA A 22 ? ILE A 27 ? ALA A 2 ILE A 7 1 ? 6
HELX_P HELX_P2 AA2 ARG A 29 ? GLY A 44 ? ARG A 9 GLY A 24 1 ? 16
HELX_P HELX_P3 AA3 THR A 45 ? PHE A 48 ? THR A 25 PHE A 28 5 ? 4
HELX_P HELX_P4 AA4 TRP A 54 ? LEU A 67 ? TRP A 34 LEU A 47 1 ? 14
HELX_P HELX_P5 AA5 ARG A 72 ? ILE A 92 ? ARG A 52 ILE A 72 1 ? 21
HELX_P HELX_P6 AA6 TRP A 94 ? THR A 101 ? TRP A 74 THR A 81 1 ? 8
HELX_P HELX_P7 AA7 PRO A 106 ? TRP A 136 ? PRO A 86 TRP A 116 1 ? 31
HELX_P HELX_P8 AA8 THR A 140 ? ILE A 146 ? THR A 120 ILE A 126 1 ? 7
HELX_P HELX_P9 AA9 ILE A 146 ? GLY A 160 ? ILE A 126 GLY A 140 1 ? 15
HELX_P HELX_P10 AB1 TRP A 161 ? GLY A 165 ? TRP A 141 GLY A 145 5 ? 5
HELX_P HELX_P11 AB2 GLN A 170 ? ASP A 177 ? GLN A 150 ASP A 157 5 ? 8
HELX_P HELX_P12 AB3 LEU A 180 ? GLY A 182 ? LEU A 160 GLY A 162 5 ? 3
HELX_P HELX_P13 AB4 LEU A 183 ? GLY A 188 ? LEU A 163 GLY A 168 1 ? 6
HELX_P HELX_P14 AB5 GLY A 188 ? LYS A 209 ? GLY A 168 LYS A 189 1 ? 22
HELX_P HELX_P15 AB6 ASN A 211 ? LEU A 224 ? ASN A 191 LEU A 204 1 ? 14
HELX_P HELX_P16 AB7 PHE A 226 ? ILE A 231 ? PHE A 206 ILE A 211 5 ? 6
HELX_P HELX_P17 AB8 PRO A 238 ? THR A 241 ? PRO A 218 THR A 221 5 ? 4
HELX_P HELX_P18 AB9 PRO A 252 ? TRP A 257 ? PRO A 232 TRP A 237 1 ? 6
HELX_P HELX_P19 AC1 ASP A 258 ? ALA A 274 ? ASP A 238 ALA A 254 1 ? 17
HELX_P HELX_P20 AC2 GLN A 297 ? LYS A 311 ? GLN A 277 LYS A 291 1 ? 15
HELX_P HELX_P21 AC3 VAL A 365 ? SER A 369 ? VAL A 345 SER A 349 5 ? 5
HELX_P HELX_P22 AC4 TYR A 408 ? ILE A 411 ? TYR A 388 ILE A 391 5 ? 4
HELX_P HELX_P23 AC5 LEU A 412 ? PHE A 420 ? LEU A 392 PHE A 400 1 ? 9
HELX_P HELX_P24 AC6 SER A 439 ? ALA A 457 ? SER A 419 ALA A 437 1 ? 19
HELX_P HELX_P25 AC7 THR A 501 ? THR A 506 ? THR A 481 THR A 486 1 ? 6
HELX_P HELX_P26 AC8 ASN A 508 ? GLN A 529 ? ASN A 488 GLN A 509 1 ? 22
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? A ILE 406 C ? ? ? 1_555 A P1L 407 N ? ? A ILE 386 A P1L 387 1_555 ? ? ? ? ? ? ? 1.331 ? ?
covale2 covale both ? A P1L 407 C ? ? ? 1_555 A TYR 408 N ? ? A P1L 387 A TYR 388 1_555 ? ? ? ? ? ? ? 1.329 ? ?
#
_struct_conn_type.id covale
_struct_conn_type.criteria ?
_struct_conn_type.reference ?
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
AA1 ? 2 ?
AA2 ? 4 ?
AA3 ? 5 ?
AA4 ? 6 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
AA1 1 2 ? anti-parallel
AA2 1 2 ? parallel
AA2 2 3 ? anti-parallel
AA2 3 4 ? anti-parallel
AA3 1 2 ? parallel
AA3 2 3 ? parallel
AA3 3 4 ? parallel
AA3 4 5 ? anti-parallel
AA4 1 2 ? anti-parallel
AA4 2 3 ? parallel
AA4 3 4 ? parallel
AA4 4 5 ? anti-parallel
AA4 5 6 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
AA1 1 THR A 235 ? PRO A 236 ? THR A 215 PRO A 216
AA1 2 THR A 497 ? THR A 498 ? THR A 477 THR A 478
AA2 1 ILE A 290 ? LEU A 293 ? ILE A 270 LEU A 273
AA2 2 SER A 314 ? LEU A 324 ? SER A 294 LEU A 304
AA2 3 TYR A 330 ? GLY A 340 ? TYR A 310 GLY A 320
AA2 4 ARG A 352 ? ASN A 354 ? ARG A 332 ASN A 334
AA3 1 ILE A 290 ? LEU A 293 ? ILE A 270 LEU A 273
AA3 2 SER A 314 ? LEU A 324 ? SER A 294 LEU A 304
AA3 3 LEU A 282 ? ILE A 284 ? LEU A 262 ILE A 264
AA3 4 ILE A 242 ? GLN A 248 ? ILE A 222 GLN A 228
AA3 5 GLU A 488 ? VAL A 494 ? GLU A 468 VAL A 474
AA4 1 LEU A 395 ? SER A 396 ? LEU A 375 SER A 376
AA4 2 GLU A 401 ? ILE A 406 ? GLU A 381 ILE A 386
AA4 3 TYR A 426 ? SER A 431 ? TYR A 406 SER A 411
AA4 4 LEU A 460 ? THR A 464 ? LEU A 440 THR A 444
AA4 5 ALA A 470 ? ILE A 472 ? ALA A 450 ILE A 452
AA4 6 ILE A 478 ? MET A 481 ? ILE A 458 MET A 461
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
AA1 1 2 N THR A 235 ? N THR A 215 O THR A 498 ? O THR A 478
AA2 1 2 N ILE A 290 ? N ILE A 270 O GLY A 318 ? O GLY A 298
AA2 2 3 N ASP A 321 ? N ASP A 301 O TYR A 333 ? O TYR A 313
AA2 3 4 N ILE A 336 ? N ILE A 316 O TYR A 353 ? O TYR A 333
AA3 1 2 N ILE A 290 ? N ILE A 270 O GLY A 318 ? O GLY A 298
AA3 2 3 O VAL A 316 ? O VAL A 296 N ILE A 283 ? N ILE A 263
AA3 3 4 O ILE A 284 ? O ILE A 264 N SER A 245 ? N SER A 225
AA3 4 5 N MET A 246 ? N MET A 226 O LEU A 490 ? O LEU A 470
AA4 1 2 N LEU A 395 ? N LEU A 375 O LEU A 402 ? O LEU A 382
AA4 2 3 N THR A 403 ? N THR A 383 O LEU A 428 ? O LEU A 408
AA4 3 4 N LEU A 427 ? N LEU A 407 O LEU A 461 ? O LEU A 441
AA4 4 5 N LEU A 460 ? N LEU A 440 O ILE A 472 ? O ILE A 452
AA4 5 6 N VAL A 471 ? N VAL A 451 O ALA A 480 ? O ALA A 460
#
_atom_sites.entry_id 8B0N
_atom_sites.Cartn_transf_matrix[1][1] ?
_atom_sites.Cartn_transf_matrix[1][2] ?
_atom_sites.Cartn_transf_matrix[1][3] ?
_atom_sites.Cartn_transf_matrix[2][1] ?
_atom_sites.Cartn_transf_matrix[2][2] ?
_atom_sites.Cartn_transf_matrix[2][3] ?
_atom_sites.Cartn_transf_matrix[3][1] ?
_atom_sites.Cartn_transf_matrix[3][2] ?
_atom_sites.Cartn_transf_matrix[3][3] ?
_atom_sites.Cartn_transf_vector[1] ?
_atom_sites.Cartn_transf_vector[2] ?
_atom_sites.Cartn_transf_vector[3] ?
_atom_sites.fract_transf_matrix[1][1] 1.000000
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 1.000000
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 1.000000
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
_atom_sites.solution_primary ?
_atom_sites.solution_secondary ?
_atom_sites.solution_hydrogens ?
_atom_sites.special_details ?
#
loop_
_atom_type.symbol
C
N
O
P
S
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 MET 1 -19 ? ? ? A . n
A 1 2 GLY 2 -18 ? ? ? A . n
A 1 3 SER 3 -17 ? ? ? A . n
A 1 4 SER 4 -16 ? ? ? A . n
A 1 5 HIS 5 -15 ? ? ? A . n
A 1 6 HIS 6 -14 ? ? ? A . n
A 1 7 HIS 7 -13 ? ? ? A . n
A 1 8 HIS 8 -12 ? ? ? A . n
A 1 9 HIS 9 -11 ? ? ? A . n
A 1 10 HIS 10 -10 ? ? ? A . n
A 1 11 SER 11 -9 ? ? ? A . n
A 1 12 SER 12 -8 ? ? ? A . n
A 1 13 GLY 13 -7 ? ? ? A . n
A 1 14 LEU 14 -6 ? ? ? A . n
A 1 15 VAL 15 -5 ? ? ? A . n
A 1 16 PRO 16 -4 ? ? ? A . n
A 1 17 ARG 17 -3 ? ? ? A . n
A 1 18 GLY 18 -2 ? ? ? A . n
A 1 19 SER 19 -1 ? ? ? A . n
A 1 20 HIS 20 0 ? ? ? A . n
A 1 21 MET 21 1 1 MET MET A . n
A 1 22 ALA 22 2 2 ALA ALA A . n
A 1 23 PHE 23 3 3 PHE PHE A . n
A 1 24 ALA 24 4 4 ALA ALA A . n
A 1 25 SER 25 5 5 SER SER A . n
A 1 26 LEU 26 6 6 LEU LEU A . n
A 1 27 ILE 27 7 7 ILE ILE A . n
A 1 28 GLU 28 8 8 GLU GLU A . n
A 1 29 ARG 29 9 9 ARG ARG A . n
A 1 30 GLN 30 10 10 GLN GLN A . n
A 1 31 ARG 31 11 11 ARG ARG A . n
A 1 32 ILE 32 12 12 ILE ILE A . n
A 1 33 ARG 33 13 13 ARG ARG A . n
A 1 34 LEU 34 14 14 LEU LEU A . n
A 1 35 LEU 35 15 15 LEU LEU A . n
A 1 36 LEU 36 16 16 LEU LEU A . n
A 1 37 ALA 37 17 17 ALA ALA A . n
A 1 38 LEU 38 18 18 LEU LEU A . n
A 1 39 LEU 39 19 19 LEU LEU A . n
A 1 40 PHE 40 20 20 PHE PHE A . n
A 1 41 GLY 41 21 21 GLY GLY A . n
A 1 42 ALA 42 22 22 ALA ALA A . n
A 1 43 CYS 43 23 23 CYS CYS A . n
A 1 44 GLY 44 24 24 GLY GLY A . n
A 1 45 THR 45 25 25 THR THR A . n
A 1 46 LEU 46 26 26 LEU LEU A . n
A 1 47 ALA 47 27 27 ALA ALA A . n
A 1 48 PHE 48 28 28 PHE PHE A . n
A 1 49 SER 49 29 29 SER SER A . n
A 1 50 PRO 50 30 30 PRO PRO A . n
A 1 51 TYR 51 31 31 TYR TYR A . n
A 1 52 ASP 52 32 32 ASP ASP A . n
A 1 53 VAL 53 33 33 VAL VAL A . n
A 1 54 TRP 54 34 34 TRP TRP A . n
A 1 55 PRO 55 35 35 PRO PRO A . n
A 1 56 ALA 56 36 36 ALA ALA A . n
A 1 57 ALA 57 37 37 ALA ALA A . n
A 1 58 ILE 58 38 38 ILE ILE A . n
A 1 59 ILE 59 39 39 ILE ILE A . n
A 1 60 SER 60 40 40 SER SER A . n
A 1 61 LEU 61 41 41 LEU LEU A . n
A 1 62 MET 62 42 42 MET MET A . n
A 1 63 GLY 63 43 43 GLY GLY A . n
A 1 64 LEU 64 44 44 LEU LEU A . n
A 1 65 GLN 65 45 45 GLN GLN A . n
A 1 66 ALA 66 46 46 ALA ALA A . n
A 1 67 LEU 67 47 47 LEU LEU A . n
A 1 68 THR 68 48 48 THR THR A . n
A 1 69 PHE 69 49 49 PHE PHE A . n
A 1 70 ASN 70 50 50 ASN ASN A . n
A 1 71 ARG 71 51 51 ARG ARG A . n
A 1 72 ARG 72 52 52 ARG ARG A . n
A 1 73 PRO 73 53 53 PRO PRO A . n
A 1 74 LEU 74 54 54 LEU LEU A . n
A 1 75 GLN 75 55 55 GLN GLN A . n
A 1 76 SER 76 56 56 SER SER A . n
A 1 77 ALA 77 57 57 ALA ALA A . n
A 1 78 ALA 78 58 58 ALA ALA A . n
A 1 79 ILE 79 59 59 ILE ILE A . n
A 1 80 GLY 80 60 60 GLY GLY A . n
A 1 81 PHE 81 61 61 PHE PHE A . n
A 1 82 CYS 82 62 62 CYS CYS A . n
A 1 83 TRP 83 63 63 TRP TRP A . n
A 1 84 GLY 84 64 64 GLY GLY A . n
A 1 85 PHE 85 65 65 PHE PHE A . n
A 1 86 GLY 86 66 66 GLY GLY A . n
A 1 87 LEU 87 67 67 LEU LEU A . n
A 1 88 PHE 88 68 68 PHE PHE A . n
A 1 89 GLY 89 69 69 GLY GLY A . n
A 1 90 SER 90 70 70 SER SER A . n
A 1 91 GLY 91 71 71 GLY GLY A . n
A 1 92 ILE 92 72 72 ILE ILE A . n
A 1 93 ASN 93 73 73 ASN ASN A . n
A 1 94 TRP 94 74 74 TRP TRP A . n
A 1 95 VAL 95 75 75 VAL VAL A . n
A 1 96 TYR 96 76 76 TYR TYR A . n
A 1 97 VAL 97 77 77 VAL VAL A . n
A 1 98 SER 98 78 78 SER SER A . n
A 1 99 ILE 99 79 79 ILE ILE A . n
A 1 100 ALA 100 80 80 ALA ALA A . n
A 1 101 THR 101 81 81 THR THR A . n
A 1 102 PHE 102 82 82 PHE PHE A . n
A 1 103 GLY 103 83 83 GLY GLY A . n
A 1 104 GLY 104 84 84 GLY GLY A . n
A 1 105 MET 105 85 85 MET MET A . n
A 1 106 PRO 106 86 86 PRO PRO A . n
A 1 107 GLY 107 87 87 GLY GLY A . n
A 1 108 PRO 108 88 88 PRO PRO A . n
A 1 109 VAL 109 89 89 VAL VAL A . n
A 1 110 ASN 110 90 90 ASN ASN A . n
A 1 111 ILE 111 91 91 ILE ILE A . n
A 1 112 PHE 112 92 92 PHE PHE A . n
A 1 113 LEU 113 93 93 LEU LEU A . n
A 1 114 VAL 114 94 94 VAL VAL A . n
A 1 115 VAL 115 95 95 VAL VAL A . n
A 1 116 LEU 116 96 96 LEU LEU A . n
A 1 117 LEU 117 97 97 LEU LEU A . n
A 1 118 ALA 118 98 98 ALA ALA A . n
A 1 119 ALA 119 99 99 ALA ALA A . n
A 1 120 TYR 120 100 100 TYR TYR A . n
A 1 121 LEU 121 101 101 LEU LEU A . n
A 1 122 SER 122 102 102 SER SER A . n
A 1 123 LEU 123 103 103 LEU LEU A . n
A 1 124 TYR 124 104 104 TYR TYR A . n
A 1 125 THR 125 105 105 THR THR A . n
A 1 126 GLY 126 106 106 GLY GLY A . n
A 1 127 LEU 127 107 107 LEU LEU A . n
A 1 128 PHE 128 108 108 PHE PHE A . n
A 1 129 ALA 129 109 109 ALA ALA A . n
A 1 130 GLY 130 110 110 GLY GLY A . n
A 1 131 VAL 131 111 111 VAL VAL A . n
A 1 132 LEU 132 112 112 LEU LEU A . n
A 1 133 SER 133 113 113 SER SER A . n
A 1 134 ARG 134 114 114 ARG ARG A . n
A 1 135 LEU 135 115 115 LEU LEU A . n
A 1 136 TRP 136 116 116 TRP TRP A . n
A 1 137 PRO 137 117 117 PRO PRO A . n
A 1 138 LYS 138 118 118 LYS LYS A . n
A 1 139 THR 139 119 119 THR THR A . n
A 1 140 THR 140 120 120 THR THR A . n
A 1 141 TRP 141 121 121 TRP TRP A . n
A 1 142 LEU 142 122 122 LEU LEU A . n
A 1 143 ARG 143 123 123 ARG ARG A . n
A 1 144 VAL 144 124 124 VAL VAL A . n
A 1 145 ALA 145 125 125 ALA ALA A . n
A 1 146 ILE 146 126 126 ILE ILE A . n
A 1 147 ALA 147 127 127 ALA ALA A . n
A 1 148 ALA 148 128 128 ALA ALA A . n
A 1 149 PRO 149 129 129 PRO PRO A . n
A 1 150 ALA 150 130 130 ALA ALA A . n
A 1 151 LEU 151 131 131 LEU LEU A . n
A 1 152 TRP 152 132 132 TRP TRP A . n
A 1 153 GLN 153 133 133 GLN GLN A . n
A 1 154 VAL 154 134 134 VAL VAL A . n
A 1 155 THR 155 135 135 THR THR A . n
A 1 156 GLU 156 136 136 GLU GLU A . n
A 1 157 PHE 157 137 137 PHE PHE A . n
A 1 158 LEU 158 138 138 LEU LEU A . n
A 1 159 ARG 159 139 139 ARG ARG A . n
A 1 160 GLY 160 140 140 GLY GLY A . n
A 1 161 TRP 161 141 141 TRP TRP A . n
A 1 162 VAL 162 142 142 VAL VAL A . n
A 1 163 LEU 163 143 143 LEU LEU A . n
A 1 164 THR 164 144 144 THR THR A . n
A 1 165 GLY 165 145 145 GLY GLY A . n
A 1 166 PHE 166 146 146 PHE PHE A . n
A 1 167 PRO 167 147 147 PRO PRO A . n
A 1 168 TRP 168 148 148 TRP TRP A . n
A 1 169 LEU 169 149 149 LEU LEU A . n
A 1 170 GLN 170 150 150 GLN GLN A . n
A 1 171 PHE 171 151 151 PHE PHE A . n
A 1 172 GLY 172 152 152 GLY GLY A . n
A 1 173 TYR 173 153 153 TYR TYR A . n
A 1 174 SER 174 154 154 SER SER A . n
A 1 175 GLN 175 155 155 GLN GLN A . n
A 1 176 ILE 176 156 156 ILE ILE A . n
A 1 177 ASP 177 157 157 ASP ASP A . n
A 1 178 GLY 178 158 158 GLY GLY A . n
A 1 179 PRO 179 159 159 PRO PRO A . n
A 1 180 LEU 180 160 160 LEU LEU A . n
A 1 181 LYS 181 161 161 LYS LYS A . n
A 1 182 GLY 182 162 162 GLY GLY A . n
A 1 183 LEU 183 163 163 LEU LEU A . n
A 1 184 ALA 184 164 164 ALA ALA A . n
A 1 185 PRO 185 165 165 PRO PRO A . n
A 1 186 ILE 186 166 166 ILE ILE A . n
A 1 187 MET 187 167 167 MET MET A . n
A 1 188 GLY 188 168 168 GLY GLY A . n
A 1 189 VAL 189 169 169 VAL VAL A . n
A 1 190 GLU 190 170 170 GLU GLU A . n
A 1 191 ALA 191 171 171 ALA ALA A . n
A 1 192 ILE 192 172 172 ILE ILE A . n
A 1 193 ASN 193 173 173 ASN ASN A . n
A 1 194 PHE 194 174 174 PHE PHE A . n
A 1 195 LEU 195 175 175 LEU LEU A . n
A 1 196 LEU 196 176 176 LEU LEU A . n
A 1 197 MET 197 177 177 MET MET A . n
A 1 198 MET 198 178 178 MET MET A . n
A 1 199 VAL 199 179 179 VAL VAL A . n
A 1 200 SER 200 180 180 SER SER A . n
A 1 201 GLY 201 181 181 GLY GLY A . n
A 1 202 LEU 202 182 182 LEU LEU A . n
A 1 203 LEU 203 183 183 LEU LEU A . n
A 1 204 ALA 204 184 184 ALA ALA A . n
A 1 205 LEU 205 185 185 LEU LEU A . n
A 1 206 ALA 206 186 186 ALA ALA A . n
A 1 207 LEU 207 187 187 LEU LEU A . n
A 1 208 VAL 208 188 188 VAL VAL A . n
A 1 209 LYS 209 189 189 LYS LYS A . n
A 1 210 ARG 210 190 190 ARG ARG A . n
A 1 211 ASN 211 191 191 ASN ASN A . n
A 1 212 TRP 212 192 192 TRP TRP A . n
A 1 213 ARG 213 193 193 ARG ARG A . n
A 1 214 PRO 214 194 194 PRO PRO A . n
A 1 215 LEU 215 195 195 LEU LEU A . n
A 1 216 VAL 216 196 196 VAL VAL A . n
A 1 217 VAL 217 197 197 VAL VAL A . n
A 1 218 ALA 218 198 198 ALA ALA A . n
A 1 219 VAL 219 199 199 VAL VAL A . n
A 1 220 VAL 220 200 200 VAL VAL A . n
A 1 221 LEU 221 201 201 LEU LEU A . n
A 1 222 PHE 222 202 202 PHE PHE A . n
A 1 223 ALA 223 203 203 ALA ALA A . n
A 1 224 LEU 224 204 204 LEU LEU A . n
A 1 225 PRO 225 205 205 PRO PRO A . n
A 1 226 PHE 226 206 206 PHE PHE A . n
A 1 227 PRO 227 207 207 PRO PRO A . n
A 1 228 LEU 228 208 208 LEU LEU A . n
A 1 229 ARG 229 209 209 ARG ARG A . n
A 1 230 TYR 230 210 210 TYR TYR A . n
A 1 231 ILE 231 211 211 ILE ILE A . n
A 1 232 GLN 232 212 212 GLN GLN A . n
A 1 233 TRP 233 213 213 TRP TRP A . n
A 1 234 PHE 234 214 214 PHE PHE A . n
A 1 235 THR 235 215 215 THR THR A . n
A 1 236 PRO 236 216 216 PRO PRO A . n
A 1 237 GLN 237 217 217 GLN GLN A . n
A 1 238 PRO 238 218 218 PRO PRO A . n
A 1 239 GLU 239 219 219 GLU GLU A . n
A 1 240 LYS 240 220 220 LYS LYS A . n
A 1 241 THR 241 221 221 THR THR A . n
A 1 242 ILE 242 222 222 ILE ILE A . n
A 1 243 GLN 243 223 223 GLN GLN A . n
A 1 244 VAL 244 224 224 VAL VAL A . n
A 1 245 SER 245 225 225 SER SER A . n
A 1 246 MET 246 226 226 MET MET A . n
A 1 247 VAL 247 227 227 VAL VAL A . n
A 1 248 GLN 248 228 228 GLN GLN A . n
A 1 249 GLY 249 229 229 GLY GLY A . n
A 1 250 ASP 250 230 230 ASP ASP A . n
A 1 251 ILE 251 231 231 ILE ILE A . n
A 1 252 PRO 252 232 232 PRO PRO A . n
A 1 253 GLN 253 233 233 GLN GLN A . n
A 1 254 SER 254 234 234 SER SER A . n
A 1 255 LEU 255 235 235 LEU LEU A . n
A 1 256 LYS 256 236 236 LYS LYS A . n
A 1 257 TRP 257 237 237 TRP TRP A . n
A 1 258 ASP 258 238 238 ASP ASP A . n
A 1 259 GLU 259 239 239 GLU GLU A . n
A 1 260 GLY 260 240 240 GLY GLY A . n
A 1 261 GLN 261 241 241 GLN GLN A . n
A 1 262 LEU 262 242 242 LEU LEU A . n
A 1 263 LEU 263 243 243 LEU LEU A . n
A 1 264 ASN 264 244 244 ASN ASN A . n
A 1 265 THR 265 245 245 THR THR A . n
A 1 266 LEU 266 246 246 LEU LEU A . n
A 1 267 LYS 267 247 247 LYS LYS A . n
A 1 268 ILE 268 248 248 ILE ILE A . n
A 1 269 TYR 269 249 249 TYR TYR A . n
A 1 270 TYR 270 250 250 TYR TYR A . n
A 1 271 ASN 271 251 251 ASN ASN A . n
A 1 272 ALA 272 252 252 ALA ALA A . n
A 1 273 THR 273 253 253 THR THR A . n
A 1 274 ALA 274 254 254 ALA ALA A . n
A 1 275 PRO 275 255 255 PRO PRO A . n
A 1 276 LEU 276 256 256 LEU LEU A . n
A 1 277 MET 277 257 257 MET MET A . n
A 1 278 GLY 278 258 258 GLY GLY A . n
A 1 279 LYS 279 259 259 LYS LYS A . n
A 1 280 SER 280 260 260 SER SER A . n
A 1 281 SER 281 261 261 SER SER A . n
A 1 282 LEU 282 262 262 LEU LEU A . n
A 1 283 ILE 283 263 263 ILE ILE A . n
A 1 284 ILE 284 264 264 ILE ILE A . n
A 1 285 TRP 285 265 265 TRP TRP A . n
A 1 286 PRO 286 266 266 PRO PRO A . n
A 1 287 GLU 287 267 267 GLU GLU A . n
A 1 288 SER 288 268 268 SER SER A . n
A 1 289 ALA 289 269 269 ALA ALA A . n
A 1 290 ILE 290 270 270 ILE ILE A . n
A 1 291 THR 291 271 271 THR THR A . n
A 1 292 ASP 292 272 272 ASP ASP A . n
A 1 293 LEU 293 273 273 LEU LEU A . n
A 1 294 GLU 294 274 274 GLU GLU A . n
A 1 295 ILE 295 275 275 ILE ILE A . n
A 1 296 ASN 296 276 276 ASN ASN A . n
A 1 297 GLN 297 277 277 GLN GLN A . n
A 1 298 GLN 298 278 278 GLN GLN A . n
A 1 299 PRO 299 279 279 PRO PRO A . n
A 1 300 PHE 300 280 280 PHE PHE A . n
A 1 301 LEU 301 281 281 LEU LEU A . n
A 1 302 LYS 302 282 282 LYS LYS A . n
A 1 303 ALA 303 283 283 ALA ALA A . n
A 1 304 LEU 304 284 284 LEU LEU A . n
A 1 305 ASP 305 285 285 ASP ASP A . n
A 1 306 GLY 306 286 286 GLY GLY A . n
A 1 307 GLU 307 287 287 GLU GLU A . n
A 1 308 LEU 308 288 288 LEU LEU A . n
A 1 309 ARG 309 289 289 ARG ARG A . n
A 1 310 ASP 310 290 290 ASP ASP A . n
A 1 311 LYS 311 291 291 LYS LYS A . n
A 1 312 GLY 312 292 292 GLY GLY A . n
A 1 313 SER 313 293 293 SER SER A . n
A 1 314 SER 314 294 294 SER SER A . n
A 1 315 LEU 315 295 295 LEU LEU A . n
A 1 316 VAL 316 296 296 VAL VAL A . n
A 1 317 THR 317 297 297 THR THR A . n
A 1 318 GLY 318 298 298 GLY GLY A . n
A 1 319 ILE 319 299 299 ILE ILE A . n
A 1 320 VAL 320 300 300 VAL VAL A . n
A 1 321 ASP 321 301 301 ASP ASP A . n
A 1 322 ALA 322 302 302 ALA ALA A . n
A 1 323 ARG 323 303 303 ARG ARG A . n
A 1 324 LEU 324 304 304 LEU LEU A . n
A 1 325 ASN 325 305 305 ASN ASN A . n
A 1 326 LYS 326 306 306 LYS LYS A . n
A 1 327 GLN 327 307 307 GLN GLN A . n
A 1 328 ASN 328 308 308 ASN ASN A . n
A 1 329 ARG 329 309 309 ARG ARG A . n
A 1 330 TYR 330 310 310 TYR TYR A . n
A 1 331 ASP 331 311 311 ASP ASP A . n
A 1 332 THR 332 312 312 THR THR A . n
A 1 333 TYR 333 313 313 TYR TYR A . n
A 1 334 ASN 334 314 314 ASN ASN A . n
A 1 335 THR 335 315 315 THR THR A . n
A 1 336 ILE 336 316 316 ILE ILE A . n
A 1 337 ILE 337 317 317 ILE ILE A . n
A 1 338 THR 338 318 318 THR THR A . n
A 1 339 LEU 339 319 319 LEU LEU A . n
A 1 340 GLY 340 320 320 GLY GLY A . n
A 1 341 LYS 341 321 321 LYS LYS A . n
A 1 342 GLY 342 322 322 GLY GLY A . n
A 1 343 ALA 343 323 323 ALA ALA A . n
A 1 344 PRO 344 324 324 PRO PRO A . n
A 1 345 TYR 345 325 325 TYR TYR A . n
A 1 346 SER 346 326 326 SER SER A . n
A 1 347 TYR 347 327 327 TYR TYR A . n
A 1 348 GLU 348 328 328 GLU GLU A . n
A 1 349 SER 349 329 329 SER SER A . n
A 1 350 ALA 350 330 330 ALA ALA A . n
A 1 351 ASP 351 331 331 ASP ASP A . n
A 1 352 ARG 352 332 332 ARG ARG A . n
A 1 353 TYR 353 333 333 TYR TYR A . n
A 1 354 ASN 354 334 334 ASN ASN A . n
A 1 355 LYS 355 335 335 LYS LYS A . n
A 1 356 ASN 356 336 336 ASN ASN A . n
A 1 357 HIS 357 337 337 HIS HIS A . n
A 1 358 LEU 358 338 338 LEU LEU A . n
A 1 359 VAL 359 339 339 VAL VAL A . n
A 1 360 PRO 360 340 340 PRO PRO A . n
A 1 361 PHE 361 341 341 PHE PHE A . n
A 1 362 GLY 362 342 342 GLY GLY A . n
A 1 363 GLU 363 343 343 GLU GLU A . n
A 1 364 PHE 364 344 344 PHE PHE A . n
A 1 365 VAL 365 345 345 VAL VAL A . n
A 1 366 PRO 366 346 346 PRO PRO A . n
A 1 367 LEU 367 347 347 LEU LEU A . n
A 1 368 GLU 368 348 348 GLU GLU A . n
A 1 369 SER 369 349 349 SER SER A . n
A 1 370 ILE 370 350 350 ILE ILE A . n
A 1 371 LEU 371 351 351 LEU LEU A . n
A 1 372 ARG 372 352 352 ARG ARG A . n
A 1 373 PRO 373 353 353 PRO PRO A . n
A 1 374 LEU 374 354 354 LEU LEU A . n
A 1 375 ALA 375 355 355 ALA ALA A . n
A 1 376 PRO 376 356 356 PRO PRO A . n
A 1 377 PHE 377 357 357 PHE PHE A . n
A 1 378 PHE 378 358 358 PHE PHE A . n
A 1 379 ASP 379 359 359 ASP ASP A . n
A 1 380 LEU 380 360 360 LEU LEU A . n
A 1 381 PRO 381 361 361 PRO PRO A . n
A 1 382 MET 382 362 362 MET MET A . n
A 1 383 SER 383 363 363 SER SER A . n
A 1 384 SER 384 364 364 SER SER A . n
A 1 385 PHE 385 365 365 PHE PHE A . n
A 1 386 SER 386 366 366 SER SER A . n
A 1 387 ARG 387 367 367 ARG ARG A . n
A 1 388 GLY 388 368 368 GLY GLY A . n
A 1 389 PRO 389 369 369 PRO PRO A . n
A 1 390 TYR 390 370 370 TYR TYR A . n
A 1 391 ILE 391 371 371 ILE ILE A . n
A 1 392 GLN 392 372 372 GLN GLN A . n
A 1 393 PRO 393 373 373 PRO PRO A . n
A 1 394 PRO 394 374 374 PRO PRO A . n
A 1 395 LEU 395 375 375 LEU LEU A . n
A 1 396 SER 396 376 376 SER SER A . n
A 1 397 ALA 397 377 377 ALA ALA A . n
A 1 398 ASN 398 378 378 ASN ASN A . n
A 1 399 GLY 399 379 379 GLY GLY A . n
A 1 400 ILE 400 380 380 ILE ILE A . n
A 1 401 GLU 401 381 381 GLU GLU A . n
A 1 402 LEU 402 382 382 LEU LEU A . n
A 1 403 THR 403 383 383 THR THR A . n
A 1 404 ALA 404 384 384 ALA ALA A . n
A 1 405 ALA 405 385 385 ALA ALA A . n
A 1 406 ILE 406 386 386 ILE ILE A . n
A 1 407 P1L 407 387 387 P1L CYP A . n
A 1 408 TYR 408 388 388 TYR TYR A . n
A 1 409 GLU 409 389 389 GLU GLU A . n
A 1 410 ILE 410 390 390 ILE ILE A . n
A 1 411 ILE 411 391 391 ILE ILE A . n
A 1 412 LEU 412 392 392 LEU LEU A . n
A 1 413 GLY 413 393 393 GLY GLY A . n
A 1 414 GLU 414 394 394 GLU GLU A . n
A 1 415 GLN 415 395 395 GLN GLN A . n
A 1 416 VAL 416 396 396 VAL VAL A . n
A 1 417 ARG 417 397 397 ARG ARG A . n
A 1 418 ASP 418 398 398 ASP ASP A . n
A 1 419 ASN 419 399 399 ASN ASN A . n
A 1 420 PHE 420 400 400 PHE PHE A . n
A 1 421 ARG 421 401 401 ARG ARG A . n
A 1 422 PRO 422 402 402 PRO PRO A . n
A 1 423 ASP 423 403 403 ASP ASP A . n
A 1 424 THR 424 404 404 THR THR A . n
A 1 425 ASP 425 405 405 ASP ASP A . n
A 1 426 TYR 426 406 406 TYR TYR A . n
A 1 427 LEU 427 407 407 LEU LEU A . n
A 1 428 LEU 428 408 408 LEU LEU A . n
A 1 429 THR 429 409 409 THR THR A . n
A 1 430 ILE 430 410 410 ILE ILE A . n
A 1 431 SER 431 411 411 SER SER A . n
A 1 432 ASN 432 412 412 ASN ASN A . n
A 1 433 ASP 433 413 413 ASP ASP A . n
A 1 434 ALA 434 414 414 ALA ALA A . n
A 1 435 TRP 435 415 415 TRP TRP A . n
A 1 436 PHE 436 416 416 PHE PHE A . n
A 1 437 GLY 437 417 417 GLY GLY A . n
A 1 438 LYS 438 418 418 LYS LYS A . n
A 1 439 SER 439 419 419 SER SER A . n
A 1 440 ILE 440 420 420 ILE ILE A . n
A 1 441 GLY 441 421 421 GLY GLY A . n
A 1 442 PRO 442 422 422 PRO PRO A . n
A 1 443 TRP 443 423 423 TRP TRP A . n
A 1 444 GLN 444 424 424 GLN GLN A . n
A 1 445 HIS 445 425 425 HIS HIS A . n
A 1 446 PHE 446 426 426 PHE PHE A . n
A 1 447 GLN 447 427 427 GLN GLN A . n
A 1 448 MET 448 428 428 MET MET A . n
A 1 449 ALA 449 429 429 ALA ALA A . n
A 1 450 ARG 450 430 430 ARG ARG A . n
A 1 451 MET 451 431 431 MET MET A . n
A 1 452 ARG 452 432 432 ARG ARG A . n
A 1 453 ALA 453 433 433 ALA ALA A . n
A 1 454 LEU 454 434 434 LEU LEU A . n
A 1 455 GLU 455 435 435 GLU GLU A . n
A 1 456 LEU 456 436 436 LEU LEU A . n
A 1 457 ALA 457 437 437 ALA ALA A . n
A 1 458 ARG 458 438 438 ARG ARG A . n
A 1 459 PRO 459 439 439 PRO PRO A . n
A 1 460 LEU 460 440 440 LEU LEU A . n
A 1 461 LEU 461 441 441 LEU LEU A . n
A 1 462 ARG 462 442 442 ARG ARG A . n
A 1 463 SER 463 443 443 SER SER A . n
A 1 464 THR 464 444 444 THR THR A . n
A 1 465 ASN 465 445 445 ASN ASN A . n
A 1 466 ASN 466 446 446 ASN ASN A . n
A 1 467 GLY 467 447 447 GLY GLY A . n
A 1 468 ILE 468 448 448 ILE ILE A . n
A 1 469 THR 469 449 449 THR THR A . n
A 1 470 ALA 470 450 450 ALA ALA A . n
A 1 471 VAL 471 451 451 VAL VAL A . n
A 1 472 ILE 472 452 452 ILE ILE A . n
A 1 473 GLY 473 453 453 GLY GLY A . n
A 1 474 PRO 474 454 454 PRO PRO A . n
A 1 475 GLN 475 455 455 GLN GLN A . n
A 1 476 GLY 476 456 456 GLY GLY A . n
A 1 477 GLU 477 457 457 GLU GLU A . n
A 1 478 ILE 478 458 458 ILE ILE A . n
A 1 479 GLN 479 459 459 GLN GLN A . n
A 1 480 ALA 480 460 460 ALA ALA A . n
A 1 481 MET 481 461 461 MET MET A . n
A 1 482 ILE 482 462 462 ILE ILE A . n
A 1 483 PRO 483 463 463 PRO PRO A . n
A 1 484 GLN 484 464 464 GLN GLN A . n
A 1 485 PHE 485 465 465 PHE PHE A . n
A 1 486 THR 486 466 466 THR THR A . n
A 1 487 ARG 487 467 467 ARG ARG A . n
A 1 488 GLU 488 468 468 GLU GLU A . n
A 1 489 VAL 489 469 469 VAL VAL A . n
A 1 490 LEU 490 470 470 LEU LEU A . n
A 1 491 THR 491 471 471 THR THR A . n
A 1 492 THR 492 472 472 THR THR A . n
A 1 493 ASN 493 473 473 ASN ASN A . n
A 1 494 VAL 494 474 474 VAL VAL A . n
A 1 495 THR 495 475 475 THR THR A . n
A 1 496 PRO 496 476 476 PRO PRO A . n
A 1 497 THR 497 477 477 THR THR A . n
A 1 498 THR 498 478 478 THR THR A . n
A 1 499 GLY 499 479 479 GLY GLY A . n
A 1 500 LEU 500 480 480 LEU LEU A . n
A 1 501 THR 501 481 481 THR THR A . n
A 1 502 PRO 502 482 482 PRO PRO A . n
A 1 503 TYR 503 483 483 TYR TYR A . n
A 1 504 ALA 504 484 484 ALA ALA A . n
A 1 505 ARG 505 485 485 ARG ARG A . n
A 1 506 THR 506 486 486 THR THR A . n
A 1 507 GLY 507 487 487 GLY GLY A . n
A 1 508 ASN 508 488 488 ASN ASN A . n
A 1 509 TRP 509 489 489 TRP TRP A . n
A 1 510 PRO 510 490 490 PRO PRO A . n
A 1 511 LEU 511 491 491 LEU LEU A . n
A 1 512 TRP 512 492 492 TRP TRP A . n
A 1 513 VAL 513 493 493 VAL VAL A . n
A 1 514 LEU 514 494 494 LEU LEU A . n
A 1 515 THR 515 495 495 THR THR A . n
A 1 516 ALA 516 496 496 ALA ALA A . n
A 1 517 LEU 517 497 497 LEU LEU A . n
A 1 518 PHE 518 498 498 PHE PHE A . n
A 1 519 GLY 519 499 499 GLY GLY A . n
A 1 520 PHE 520 500 500 PHE PHE A . n
A 1 521 ALA 521 501 501 ALA ALA A . n
A 1 522 ALA 522 502 502 ALA ALA A . n
A 1 523 VAL 523 503 503 VAL VAL A . n
A 1 524 LEU 524 504 504 LEU LEU A . n
A 1 525 MET 525 505 505 MET MET A . n
A 1 526 SER 526 506 506 SER SER A . n
A 1 527 LEU 527 507 507 LEU LEU A . n
A 1 528 ARG 528 508 508 ARG ARG A . n
A 1 529 GLN 529 509 509 GLN GLN A . n
A 1 530 ARG 530 510 510 ARG ARG A . n
A 1 531 ARG 531 511 ? ? ? A . n
A 1 532 LYS 532 512 ? ? ? A . n
#
_pdbx_contact_author.id 2
_pdbx_contact_author.email moransb@weizmann.ac.il
_pdbx_contact_author.name_first Moran
_pdbx_contact_author.name_last 'Shalev Benami'
_pdbx_contact_author.name_mi ?
_pdbx_contact_author.role 'principal investigator/group leader'
_pdbx_contact_author.identifier_ORCID 0000-0001-6902-1924
#
_pdbx_nonpoly_scheme.asym_id B
_pdbx_nonpoly_scheme.entity_id 2
_pdbx_nonpoly_scheme.mon_id OU9
_pdbx_nonpoly_scheme.ndb_seq_num 1
_pdbx_nonpoly_scheme.pdb_seq_num 601
_pdbx_nonpoly_scheme.auth_seq_num 601
_pdbx_nonpoly_scheme.pdb_mon_id OU9
_pdbx_nonpoly_scheme.auth_mon_id POE
_pdbx_nonpoly_scheme.pdb_strand_id A
_pdbx_nonpoly_scheme.pdb_ins_code .
#
_pdbx_struct_mod_residue.id 1
_pdbx_struct_mod_residue.label_asym_id A
_pdbx_struct_mod_residue.label_comp_id P1L
_pdbx_struct_mod_residue.label_seq_id 407
_pdbx_struct_mod_residue.auth_asym_id A
_pdbx_struct_mod_residue.auth_comp_id P1L
_pdbx_struct_mod_residue.auth_seq_id 387
_pdbx_struct_mod_residue.PDB_ins_code ?
_pdbx_struct_mod_residue.parent_comp_id CYS
_pdbx_struct_mod_residue.details 'modified residue'
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 0 ?
1 MORE 0 ?
1 'SSA (A^2)' 19810 ?
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation ?
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_pdbx_audit_revision_history.ordinal 1
_pdbx_audit_revision_history.data_content_type 'Structure model'
_pdbx_audit_revision_history.major_revision 1
_pdbx_audit_revision_history.minor_revision 0
_pdbx_audit_revision_history.revision_date 2023-07-12
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
_space_group_symop.id 1
_space_group_symop.operation_xyz x,y,z
#
_software.citation_id ?
_software.classification refinement
_software.compiler_name ?
_software.compiler_version ?
_software.contact_author ?
_software.contact_author_email ?
_software.date ?
_software.description ?
_software.dependencies ?
_software.hardware ?
_software.language ?
_software.location ?
_software.mods ?
_software.name PHENIX
_software.os ?
_software.os_version ?
_software.type ?
_software.version 1.20.1_4487:
_software.pdbx_ordinal 1
#
_pdbx_entry_details.entry_id 8B0N
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.has_ligand_of_interest Y
#
_em_3d_fitting.entry_id 8B0N
_em_3d_fitting.id 1
_em_3d_fitting.details ?
_em_3d_fitting.overall_b_value ?
_em_3d_fitting.ref_protocol ?
_em_3d_fitting.ref_space ?
_em_3d_fitting.target_criteria ?
_em_3d_fitting.method ?
#
_em_3d_reconstruction.entry_id 8B0N
_em_3d_reconstruction.id 1
_em_3d_reconstruction.algorithm ?
_em_3d_reconstruction.details ?
_em_3d_reconstruction.refinement_type ?
_em_3d_reconstruction.image_processing_id 1
_em_3d_reconstruction.num_class_averages ?
_em_3d_reconstruction.num_particles 155970
_em_3d_reconstruction.resolution 2.67
_em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF'
_em_3d_reconstruction.symmetry_type POINT
_em_3d_reconstruction.method ?
_em_3d_reconstruction.nominal_pixel_size ?
_em_3d_reconstruction.actual_pixel_size ?
_em_3d_reconstruction.magnification_calibration ?
#
_em_buffer.id 1
_em_buffer.details ?
_em_buffer.pH 6.0
_em_buffer.specimen_id 1
_em_buffer.name ?
#
_em_entity_assembly.id 1
_em_entity_assembly.parent_id 0
_em_entity_assembly.details ?
_em_entity_assembly.name 'Apolipoprotein N-acyltransferase'
_em_entity_assembly.source RECOMBINANT
_em_entity_assembly.type 'ORGANELLE OR CELLULAR COMPONENT'
_em_entity_assembly.entity_id_list 1
_em_entity_assembly.synonym ?
_em_entity_assembly.oligomeric_details ?
#
_em_imaging.id 1
_em_imaging.entry_id 8B0N
_em_imaging.accelerating_voltage 300
_em_imaging.alignment_procedure ?
_em_imaging.c2_aperture_diameter ?
_em_imaging.calibrated_defocus_max ?
_em_imaging.calibrated_defocus_min ?
_em_imaging.calibrated_magnification ?
_em_imaging.cryogen ?
_em_imaging.details ?
_em_imaging.electron_source 'FIELD EMISSION GUN'
_em_imaging.illumination_mode 'FLOOD BEAM'
_em_imaging.microscope_model 'FEI TITAN KRIOS'
_em_imaging.mode 'BRIGHT FIELD'
_em_imaging.nominal_cs ?
_em_imaging.nominal_defocus_max 2400
_em_imaging.nominal_defocus_min 800
_em_imaging.nominal_magnification ?
_em_imaging.recording_temperature_maximum ?
_em_imaging.recording_temperature_minimum ?
_em_imaging.residual_tilt ?
_em_imaging.specimen_holder_model ?
_em_imaging.specimen_id 1
_em_imaging.citation_id ?
_em_imaging.date ?
_em_imaging.temperature ?
_em_imaging.tilt_angle_min ?
_em_imaging.tilt_angle_max ?
_em_imaging.astigmatism ?
_em_imaging.detector_distance ?
_em_imaging.electron_beam_tilt_params ?
_em_imaging.specimen_holder_type ?
#
_em_vitrification.id 1
_em_vitrification.specimen_id 1
_em_vitrification.chamber_temperature 295
_em_vitrification.cryogen_name ETHANE
_em_vitrification.details ?
_em_vitrification.humidity 100
_em_vitrification.instrument 'FEI VITROBOT MARK IV'
_em_vitrification.entry_id 8B0N
_em_vitrification.citation_id ?
_em_vitrification.method ?
_em_vitrification.temp ?
_em_vitrification.time_resolved_state ?
#
_em_experiment.entry_id 8B0N
_em_experiment.id 1
_em_experiment.aggregation_state PARTICLE
_em_experiment.reconstruction_method 'SINGLE PARTICLE'
_em_experiment.entity_assembly_id 1
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 THR A 144 ? ? 68.38 -5.04
2 1 PHE A 146 ? ? -157.59 74.42
3 1 ARG A 190 ? ? -69.11 97.78
4 1 PRO A 266 ? ? -67.46 -179.62
5 1 GLN A 307 ? ? -92.18 49.93
6 1 ALA A 323 ? ? -161.48 76.75
7 1 PHE A 341 ? ? 66.01 -1.42
8 1 LEU A 347 ? ? 71.82 -8.41
9 1 ALA A 385 ? ? -160.73 115.25
10 1 P1L A 387 ? ? 60.04 -110.54
11 1 SER A 419 ? ? -146.81 -159.58
12 1 ILE A 420 ? ? -59.36 -9.93
13 1 THR A 486 ? ? -94.91 -60.03
#
loop_
_pdbx_unobs_or_zero_occ_atoms.id
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_atoms.polymer_flag
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id
_pdbx_unobs_or_zero_occ_atoms.label_alt_id
_pdbx_unobs_or_zero_occ_atoms.label_asym_id
_pdbx_unobs_or_zero_occ_atoms.label_comp_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_atom_id
1 1 Y 1 A MET 1 ? CG ? A MET 21 CG
2 1 Y 1 A MET 1 ? SD ? A MET 21 SD
3 1 Y 1 A MET 1 ? CE ? A MET 21 CE
4 1 Y 1 A GLU 239 ? CG ? A GLU 259 CG
5 1 Y 1 A GLU 239 ? CD ? A GLU 259 CD
6 1 Y 1 A GLU 239 ? OE1 ? A GLU 259 OE1
7 1 Y 1 A GLU 239 ? OE2 ? A GLU 259 OE2
8 1 Y 1 A LYS 306 ? CG ? A LYS 326 CG
9 1 Y 1 A LYS 306 ? CD ? A LYS 326 CD
10 1 Y 1 A LYS 306 ? CE ? A LYS 326 CE
11 1 Y 1 A LYS 306 ? NZ ? A LYS 326 NZ
12 1 Y 1 A ASN 308 ? CG ? A ASN 328 CG
13 1 Y 1 A ASN 308 ? OD1 ? A ASN 328 OD1
14 1 Y 1 A ASN 308 ? ND2 ? A ASN 328 ND2
15 1 Y 1 A LEU 347 ? CG ? A LEU 367 CG
16 1 Y 1 A LEU 347 ? CD1 ? A LEU 367 CD1
17 1 Y 1 A LEU 347 ? CD2 ? A LEU 367 CD2
18 1 Y 1 A GLU 348 ? CG ? A GLU 368 CG
19 1 Y 1 A GLU 348 ? CD ? A GLU 368 CD
20 1 Y 1 A GLU 348 ? OE1 ? A GLU 368 OE1
21 1 Y 1 A GLU 348 ? OE2 ? A GLU 368 OE2
22 1 Y 1 A SER 349 ? OG ? A SER 369 OG
23 1 Y 1 A ILE 350 ? CG1 ? A ILE 370 CG1
24 1 Y 1 A ILE 350 ? CG2 ? A ILE 370 CG2
25 1 Y 1 A ILE 350 ? CD1 ? A ILE 370 CD1
26 1 Y 1 A LEU 351 ? CG ? A LEU 371 CG
27 1 Y 1 A LEU 351 ? CD1 ? A LEU 371 CD1
28 1 Y 1 A LEU 351 ? CD2 ? A LEU 371 CD2
29 1 Y 1 A ARG 352 ? CG ? A ARG 372 CG
30 1 Y 1 A ARG 352 ? CD ? A ARG 372 CD
31 1 Y 1 A ARG 352 ? NE ? A ARG 372 NE
32 1 Y 1 A ARG 352 ? CZ ? A ARG 372 CZ
33 1 Y 1 A ARG 352 ? NH1 ? A ARG 372 NH1
34 1 Y 1 A ARG 352 ? NH2 ? A ARG 372 NH2
35 1 Y 1 A LEU 354 ? CG ? A LEU 374 CG
36 1 Y 1 A LEU 354 ? CD1 ? A LEU 374 CD1
37 1 Y 1 A LEU 354 ? CD2 ? A LEU 374 CD2
38 1 Y 1 A PHE 357 ? CG ? A PHE 377 CG
39 1 Y 1 A PHE 357 ? CD1 ? A PHE 377 CD1
40 1 Y 1 A PHE 357 ? CD2 ? A PHE 377 CD2
41 1 Y 1 A PHE 357 ? CE1 ? A PHE 377 CE1
42 1 Y 1 A PHE 357 ? CE2 ? A PHE 377 CE2
43 1 Y 1 A PHE 357 ? CZ ? A PHE 377 CZ
44 1 Y 1 A PHE 358 ? CG ? A PHE 378 CG
45 1 Y 1 A PHE 358 ? CD1 ? A PHE 378 CD1
46 1 Y 1 A PHE 358 ? CD2 ? A PHE 378 CD2
47 1 Y 1 A PHE 358 ? CE1 ? A PHE 378 CE1
48 1 Y 1 A PHE 358 ? CE2 ? A PHE 378 CE2
49 1 Y 1 A PHE 358 ? CZ ? A PHE 378 CZ
50 1 Y 1 A ASP 359 ? CG ? A ASP 379 CG
51 1 Y 1 A ASP 359 ? OD1 ? A ASP 379 OD1
52 1 Y 1 A ASP 359 ? OD2 ? A ASP 379 OD2
53 1 Y 1 A LEU 360 ? CG ? A LEU 380 CG
54 1 Y 1 A LEU 360 ? CD1 ? A LEU 380 CD1
55 1 Y 1 A LEU 360 ? CD2 ? A LEU 380 CD2
56 1 Y 1 A ARG 510 ? CG ? A ARG 530 CG
57 1 Y 1 A ARG 510 ? CD ? A ARG 530 CD
58 1 Y 1 A ARG 510 ? NE ? A ARG 530 NE
59 1 Y 1 A ARG 510 ? CZ ? A ARG 530 CZ
60 1 Y 1 A ARG 510 ? NH1 ? A ARG 530 NH1
61 1 Y 1 A ARG 510 ? NH2 ? A ARG 530 NH2
#
loop_
_pdbx_unobs_or_zero_occ_residues.id
_pdbx_unobs_or_zero_occ_residues.PDB_model_num
_pdbx_unobs_or_zero_occ_residues.polymer_flag
_pdbx_unobs_or_zero_occ_residues.occupancy_flag
_pdbx_unobs_or_zero_occ_residues.auth_asym_id
_pdbx_unobs_or_zero_occ_residues.auth_comp_id
_pdbx_unobs_or_zero_occ_residues.auth_seq_id
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code
_pdbx_unobs_or_zero_occ_residues.label_asym_id
_pdbx_unobs_or_zero_occ_residues.label_comp_id
_pdbx_unobs_or_zero_occ_residues.label_seq_id
1 1 Y 1 A MET -19 ? A MET 1
2 1 Y 1 A GLY -18 ? A GLY 2
3 1 Y 1 A SER -17 ? A SER 3
4 1 Y 1 A SER -16 ? A SER 4
5 1 Y 1 A HIS -15 ? A HIS 5
6 1 Y 1 A HIS -14 ? A HIS 6
7 1 Y 1 A HIS -13 ? A HIS 7
8 1 Y 1 A HIS -12 ? A HIS 8
9 1 Y 1 A HIS -11 ? A HIS 9
10 1 Y 1 A HIS -10 ? A HIS 10
11 1 Y 1 A SER -9 ? A SER 11
12 1 Y 1 A SER -8 ? A SER 12
13 1 Y 1 A GLY -7 ? A GLY 13
14 1 Y 1 A LEU -6 ? A LEU 14
15 1 Y 1 A VAL -5 ? A VAL 15
16 1 Y 1 A PRO -4 ? A PRO 16
17 1 Y 1 A ARG -3 ? A ARG 17
18 1 Y 1 A GLY -2 ? A GLY 18
19 1 Y 1 A SER -1 ? A SER 19
20 1 Y 1 A HIS 0 ? A HIS 20
21 1 Y 1 A ARG 511 ? A ARG 531
22 1 Y 1 A LYS 512 ? A LYS 532
#
loop_
_em_buffer_component.buffer_id
_em_buffer_component.id
_em_buffer_component.concentration
_em_buffer_component.concentration_units
_em_buffer_component.formula
_em_buffer_component.name
1 1 20 mM ? 'Sodium citrate'
1 2 250 mM ? 'Sodium chloride'
1 3 0.001 % ? 'Lauryl Maltose Neopentyl Glycol (LMNG)'
#
_em_ctf_correction.id 1
_em_ctf_correction.em_image_processing_id 1
_em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION'
_em_ctf_correction.details ?
#
_em_entity_assembly_naturalsource.id 2
_em_entity_assembly_naturalsource.entity_assembly_id 1
_em_entity_assembly_naturalsource.cell ?
_em_entity_assembly_naturalsource.cellular_location ?
_em_entity_assembly_naturalsource.ncbi_tax_id 83333
_em_entity_assembly_naturalsource.organ ?
_em_entity_assembly_naturalsource.organelle ?
_em_entity_assembly_naturalsource.organism 'Escherichia coli K-12'
_em_entity_assembly_naturalsource.strain ?
_em_entity_assembly_naturalsource.tissue ?
#
_em_entity_assembly_recombinant.id 2
_em_entity_assembly_recombinant.entity_assembly_id 1
_em_entity_assembly_recombinant.cell ?
_em_entity_assembly_recombinant.ncbi_tax_id 562
_em_entity_assembly_recombinant.organism 'Escherichia coli'
_em_entity_assembly_recombinant.plasmid ?
_em_entity_assembly_recombinant.strain ?
#
_em_image_processing.id 1
_em_image_processing.image_recording_id 1
_em_image_processing.details ?
#
_em_image_recording.id 1
_em_image_recording.imaging_id 1
_em_image_recording.avg_electron_dose_per_image 33
_em_image_recording.average_exposure_time ?
_em_image_recording.details ?
_em_image_recording.detector_mode ?
_em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)'
_em_image_recording.num_diffraction_images ?
_em_image_recording.num_grids_imaged ?
_em_image_recording.num_real_images ?
_em_image_recording.avg_electron_dose_per_subtomogram ?
#
loop_
_em_software.id
_em_software.category
_em_software.details
_em_software.name
_em_software.version
_em_software.image_processing_id
_em_software.fitting_id
_em_software.imaging_id
1 'CRYSTALLOGRAPHY MERGING' ? ? ? 1 ? 1
2 'IMAGE ACQUISITION' ? ? ? ? ? 1
3 MASKING ? ? ? ? ? ?
4 'CTF CORRECTION' ? ? ? 1 ? ?
5 'LAYERLINE INDEXING' ? ? ? ? ? ?
6 'DIFFRACTION INDEXING' ? ? ? ? ? ?
7 'MODEL FITTING' ? ? ? ? ? ?
8 'MODEL REFINEMENT' ? ? ? ? ? ?
9 OTHER ? ? ? ? ? ?
10 'INITIAL EULER ASSIGNMENT' ? ? ? 1 ? ?
11 'FINAL EULER ASSIGNMENT' ? ? ? 1 ? ?
12 CLASSIFICATION ? ? ? 1 ? ?
13 RECONSTRUCTION ? ? ? 1 ? ?
#
_em_specimen.id 1
_em_specimen.experiment_id 1
_em_specimen.concentration 14
_em_specimen.details ?
_em_specimen.embedding_applied NO
_em_specimen.shadowing_applied NO
_em_specimen.staining_applied NO
_em_specimen.vitrification_applied YES
#
loop_
_pdbx_audit_support.funding_organization
_pdbx_audit_support.country
_pdbx_audit_support.grant_number
_pdbx_audit_support.ordinal
'Science Foundation Ireland' Ireland 16/IA/4435 1
'Irish Research Council' Ireland GOIPD/2021/40 2
#
loop_
_pdbx_entity_instance_feature.ordinal
_pdbx_entity_instance_feature.comp_id
_pdbx_entity_instance_feature.asym_id
_pdbx_entity_instance_feature.seq_num
_pdbx_entity_instance_feature.auth_comp_id
_pdbx_entity_instance_feature.auth_asym_id
_pdbx_entity_instance_feature.auth_seq_num
_pdbx_entity_instance_feature.feature_type
_pdbx_entity_instance_feature.details
1 P1L ? ? P1L ? ? 'SUBJECT OF INVESTIGATION' ?
2 OU9 ? ? OU9 ? ? 'SUBJECT OF INVESTIGATION' ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name
'[(2~{S})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-oxidanyl-propan-2-yl] (~{Z})-octadec-9-enoate'
_pdbx_entity_nonpoly.comp_id OU9
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration'
_pdbx_struct_assembly_auth_evidence.details ?
#
_space_group.crystal_system triclinic
_space_group.name_H-M_alt 'P 1'
_space_group.IT_number 1
_space_group.name_Hall 'P 1'
_space_group.id 1
#