HEADER VIRAL PROTEIN 11-SEP-22 8B1O TITLE CRYSTAL STRUCTURE OF SUDV VP40 C314S MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: MATRIX PROTEIN VP40; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EBOLA VP40,EVP40,MEMBRANE-ASSOCIATED PROTEIN VP40; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SUDAN EBOLAVIRUS; SOURCE 3 ORGANISM_TAXID: 186540; SOURCE 4 GENE: VP40; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS EBOLA VIRUS, SUDV, VP40, MATRIX PROTEIN, DIMER, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.-D.WERNER,S.BECKER REVDAT 5 07-FEB-24 8B1O 1 REMARK REVDAT 4 20-SEP-23 8B1O 1 JRNL REVDAT 3 06-SEP-23 8B1O 1 COMPND SOURCE DBREF SEQADV REVDAT 2 12-JUL-23 8B1O 1 JRNL REVDAT 1 21-JUN-23 8B1O 0 JRNL AUTH A.D.WERNER,M.SCHAUFLINGER,M.J.NORRIS,M.KLUVER,A.TRODLER, JRNL AUTH 2 A.HERWIG,C.BRANDSTADTER,M.DILLENBERGER,G.KLEBE,A.HEINE, JRNL AUTH 3 E.O.SAPHIRE,K.BECKER,S.BECKER JRNL TITL THE C-TERMINUS OF SUDAN EBOLAVIRUS VP40 CONTAINS A JRNL TITL 2 FUNCTIONALLY IMPORTANT CX N C MOTIF, A TARGET FOR REDOX JRNL TITL 3 MODIFICATIONS. JRNL REF STRUCTURE V. 31 1038 2023 JRNL REFN ISSN 0969-2126 JRNL PMID 37392738 JRNL DOI 10.1016/J.STR.2023.06.004 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.16 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 27542 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 1342 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.1600 - 3.7700 0.98 2641 143 0.1641 0.1856 REMARK 3 2 3.7700 - 2.9900 0.99 2675 119 0.1861 0.2028 REMARK 3 3 2.9900 - 2.6100 1.00 2657 134 0.2055 0.2493 REMARK 3 4 2.6100 - 2.3800 0.98 2559 151 0.1977 0.2524 REMARK 3 5 2.3800 - 2.2000 0.96 2562 131 0.1894 0.2087 REMARK 3 6 2.2000 - 2.0700 0.98 2608 147 0.1848 0.2242 REMARK 3 7 2.0700 - 1.9700 0.99 2611 131 0.1827 0.2252 REMARK 3 8 1.9700 - 1.8900 0.99 2622 123 0.1922 0.2352 REMARK 3 9 1.8900 - 1.8100 1.00 2633 123 0.2217 0.2226 REMARK 3 10 1.8100 - 1.7500 0.99 2632 140 0.2759 0.3051 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.195 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.248 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1843 REMARK 3 ANGLE : 0.793 2521 REMARK 3 CHIRALITY : 0.055 306 REMARK 3 PLANARITY : 0.006 321 REMARK 3 DIHEDRAL : 13.383 674 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 44 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.5858 -17.5067 18.5206 REMARK 3 T TENSOR REMARK 3 T11: 0.2024 T22: 0.1770 REMARK 3 T33: 0.0999 T12: 0.0100 REMARK 3 T13: -0.0157 T23: -0.0579 REMARK 3 L TENSOR REMARK 3 L11: 5.1318 L22: 4.7870 REMARK 3 L33: 4.3456 L12: 1.6814 REMARK 3 L13: -1.5761 L23: -1.9618 REMARK 3 S TENSOR REMARK 3 S11: -0.1415 S12: 0.1466 S13: 0.0115 REMARK 3 S21: -0.2324 S22: -0.0073 S23: 0.0044 REMARK 3 S31: -0.1574 S32: -0.0052 S33: 0.1934 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 71 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.6909 -21.3075 17.4006 REMARK 3 T TENSOR REMARK 3 T11: 0.2411 T22: 0.2326 REMARK 3 T33: 0.2872 T12: 0.0085 REMARK 3 T13: 0.0007 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 1.3255 L22: 4.4298 REMARK 3 L33: 1.1660 L12: 1.0804 REMARK 3 L13: 0.2538 L23: 0.1517 REMARK 3 S TENSOR REMARK 3 S11: -0.0845 S12: 0.0142 S13: 0.0695 REMARK 3 S21: -0.2619 S22: 0.0063 S23: 0.5463 REMARK 3 S31: 0.0010 S32: -0.1327 S33: 0.0857 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 186 THROUGH 205 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.9926 -1.0403 6.1559 REMARK 3 T TENSOR REMARK 3 T11: 0.6310 T22: 0.4854 REMARK 3 T33: 0.3931 T12: 0.0620 REMARK 3 T13: -0.0998 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 5.9140 L22: 2.6180 REMARK 3 L33: 1.1582 L12: -2.7803 REMARK 3 L13: 0.3146 L23: 0.5251 REMARK 3 S TENSOR REMARK 3 S11: -0.6318 S12: -1.1095 S13: 0.8631 REMARK 3 S21: 0.3853 S22: 0.3146 S23: -0.0204 REMARK 3 S31: -0.3359 S32: -0.4222 S33: 0.2648 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 206 THROUGH 218 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.3508 -11.4529 2.5616 REMARK 3 T TENSOR REMARK 3 T11: 0.6503 T22: 0.4397 REMARK 3 T33: 0.7082 T12: 0.0618 REMARK 3 T13: -0.2295 T23: 0.0982 REMARK 3 L TENSOR REMARK 3 L11: 7.8408 L22: 5.2086 REMARK 3 L33: 1.5248 L12: 6.1384 REMARK 3 L13: 0.8134 L23: 1.3831 REMARK 3 S TENSOR REMARK 3 S11: 0.8799 S12: 0.2778 S13: -0.6367 REMARK 3 S21: -0.9502 S22: -0.3673 S23: 0.5821 REMARK 3 S31: 0.1837 S32: -0.1684 S33: -0.4630 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 219 THROUGH 246 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.9956 1.6043 -5.4243 REMARK 3 T TENSOR REMARK 3 T11: 0.5163 T22: 0.4595 REMARK 3 T33: 0.6077 T12: -0.1069 REMARK 3 T13: -0.2304 T23: 0.1276 REMARK 3 L TENSOR REMARK 3 L11: 7.2709 L22: 6.8572 REMARK 3 L33: 7.2980 L12: -1.1114 REMARK 3 L13: -4.4046 L23: -1.9419 REMARK 3 S TENSOR REMARK 3 S11: 0.1364 S12: 0.7436 S13: 0.8116 REMARK 3 S21: -0.6175 S22: -0.1415 S23: 0.4517 REMARK 3 S31: -0.4370 S32: -0.6768 S33: 0.0231 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 247 THROUGH 307 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.4880 -7.3706 -1.2698 REMARK 3 T TENSOR REMARK 3 T11: 0.5720 T22: 0.3140 REMARK 3 T33: 0.3114 T12: -0.0499 REMARK 3 T13: -0.0785 T23: 0.0316 REMARK 3 L TENSOR REMARK 3 L11: 1.6227 L22: 6.0045 REMARK 3 L33: 3.2467 L12: -3.0113 REMARK 3 L13: 0.9702 L23: -2.7490 REMARK 3 S TENSOR REMARK 3 S11: 0.0692 S12: 0.1609 S13: 0.0737 REMARK 3 S21: -0.9908 S22: -0.0466 S23: -0.0581 REMARK 3 S31: 0.2607 S32: 0.0529 S33: -0.0327 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8B1O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1292125564. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-APR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.999998 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29723 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 48.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4LD8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MORPHEUS A7 30% (W/V) GOL_P4K REMARK 280 (GLYCEROL AND PEG4000) 0.1 M MORPHEUS BUFFER 2 (HEPES AND MOPS) REMARK 280 60 MM MORPHEUS DIVALENTS (MGCL2, CACL2), VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 32.12350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.50250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 32.12350 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 45.50250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -5.11307 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 48.16235 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 30 REMARK 465 ALA A 31 REMARK 465 HIS A 32 REMARK 465 HIS A 33 REMARK 465 HIS A 34 REMARK 465 HIS A 35 REMARK 465 HIS A 36 REMARK 465 HIS A 37 REMARK 465 VAL A 38 REMARK 465 ASP A 39 REMARK 465 ASP A 40 REMARK 465 ASP A 41 REMARK 465 ASP A 42 REMARK 465 LYS A 43 REMARK 465 PRO A 196 REMARK 465 SER A 197 REMARK 465 ASN A 198 REMARK 465 LEU A 199 REMARK 465 SER A 200 REMARK 465 GLY A 201 REMARK 465 ALA A 202 REMARK 465 LEU A 203 REMARK 465 THR A 222 REMARK 465 GLY A 223 REMARK 465 LYS A 224 REMARK 465 LYS A 225 REMARK 465 GLY A 226 REMARK 465 HIS A 227 REMARK 465 VAL A 228 REMARK 465 SER A 229 REMARK 465 ASP A 230 REMARK 465 LEU A 231 REMARK 465 THR A 232 REMARK 465 ALA A 233 REMARK 465 PRO A 234 REMARK 465 ASP A 235 REMARK 465 SER A 277 REMARK 465 GLN A 278 REMARK 465 LEU A 295 REMARK 465 ASP A 296 REMARK 465 PRO A 297 REMARK 465 PRO A 309 REMARK 465 ASP A 310 REMARK 465 TYR A 311 REMARK 465 ASP A 312 REMARK 465 ASP A 313 REMARK 465 SER A 314 REMARK 465 HIS A 315 REMARK 465 SER A 316 REMARK 465 PRO A 317 REMARK 465 ALA A 318 REMARK 465 SER A 319 REMARK 465 CYS A 320 REMARK 465 SER A 321 REMARK 465 TYR A 322 REMARK 465 LEU A 323 REMARK 465 SER A 324 REMARK 465 GLU A 325 REMARK 465 LYS A 326 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 86 CE NZ REMARK 470 LYS A 104 CE NZ REMARK 470 ARG A 204 NH1 NH2 REMARK 470 LYS A 212 CE NZ REMARK 470 ARG A 214 NE CZ NH1 NH2 REMARK 470 VAL A 216 CG1 CG2 REMARK 470 LYS A 221 CG CD CE NZ REMARK 470 LYS A 236 CE NZ REMARK 470 LYS A 270 CG CD CE NZ REMARK 470 LYS A 274 CG CD CE NZ REMARK 470 LYS A 275 CG CD CE NZ REMARK 470 LYS A 279 CE NZ REMARK 470 ILE A 293 CD1 REMARK 470 ASP A 302 CG OD1 OD2 REMARK 470 THR A 304 OG1 CG2 REMARK 470 VAL A 306 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 45 48.05 -96.80 REMARK 500 LEU A 117 49.53 -92.54 REMARK 500 ASP A 144 19.79 57.56 REMARK 500 TYR A 292 51.16 -114.57 REMARK 500 REMARK 500 REMARK: NULL DBREF 8B1O A 44 326 UNP Q5XX06 VP40_EBOSU 44 326 SEQADV 8B1O MET A 30 UNP Q5XX06 INITIATING METHIONINE SEQADV 8B1O ALA A 31 UNP Q5XX06 EXPRESSION TAG SEQADV 8B1O HIS A 32 UNP Q5XX06 EXPRESSION TAG SEQADV 8B1O HIS A 33 UNP Q5XX06 EXPRESSION TAG SEQADV 8B1O HIS A 34 UNP Q5XX06 EXPRESSION TAG SEQADV 8B1O HIS A 35 UNP Q5XX06 EXPRESSION TAG SEQADV 8B1O HIS A 36 UNP Q5XX06 EXPRESSION TAG SEQADV 8B1O HIS A 37 UNP Q5XX06 EXPRESSION TAG SEQADV 8B1O VAL A 38 UNP Q5XX06 EXPRESSION TAG SEQADV 8B1O ASP A 39 UNP Q5XX06 EXPRESSION TAG SEQADV 8B1O ASP A 40 UNP Q5XX06 EXPRESSION TAG SEQADV 8B1O ASP A 41 UNP Q5XX06 EXPRESSION TAG SEQADV 8B1O ASP A 42 UNP Q5XX06 EXPRESSION TAG SEQADV 8B1O LYS A 43 UNP Q5XX06 EXPRESSION TAG SEQADV 8B1O ASP A 67 UNP Q5XX06 ASN 67 ENGINEERED MUTATION SEQADV 8B1O SER A 314 UNP Q5XX06 CYS 314 ENGINEERED MUTATION SEQRES 1 A 297 MET ALA HIS HIS HIS HIS HIS HIS VAL ASP ASP ASP ASP SEQRES 2 A 297 LYS MET ASP THR PRO SER ASN SER MET ARG PRO VAL ALA SEQRES 3 A 297 ASP ASP ASN ILE ASP HIS THR SER HIS THR PRO ASP GLY SEQRES 4 A 297 VAL ALA SER ALA PHE ILE LEU GLU ALA THR VAL ASN VAL SEQRES 5 A 297 ILE SER GLY PRO LYS VAL LEU MET LYS GLN ILE PRO ILE SEQRES 6 A 297 TRP LEU PRO LEU GLY ILE ALA ASP GLN LYS THR TYR SER SEQRES 7 A 297 PHE ASP SER THR THR ALA ALA ILE MET LEU ALA SER TYR SEQRES 8 A 297 THR ILE THR HIS PHE GLY LYS ALA ASN ASN PRO LEU VAL SEQRES 9 A 297 ARG VAL ASN ARG LEU GLY GLN GLY ILE PRO ASP HIS PRO SEQRES 10 A 297 LEU ARG LEU LEU ARG MET GLY ASN GLN ALA PHE LEU GLN SEQRES 11 A 297 GLU PHE VAL LEU PRO PRO VAL GLN LEU PRO GLN TYR PHE SEQRES 12 A 297 THR PHE ASP LEU THR ALA LEU LYS LEU VAL THR GLN PRO SEQRES 13 A 297 LEU PRO ALA ALA THR TRP THR ASP GLU THR PRO SER ASN SEQRES 14 A 297 LEU SER GLY ALA LEU ARG PRO GLY LEU SER PHE HIS PRO SEQRES 15 A 297 LYS LEU ARG PRO VAL LEU LEU PRO GLY LYS THR GLY LYS SEQRES 16 A 297 LYS GLY HIS VAL SER ASP LEU THR ALA PRO ASP LYS ILE SEQRES 17 A 297 GLN THR ILE VAL ASN LEU MET GLN ASP PHE LYS ILE VAL SEQRES 18 A 297 PRO ILE ASP PRO ALA LYS SER ILE ILE GLY ILE GLU VAL SEQRES 19 A 297 PRO GLU LEU LEU VAL HIS LYS LEU THR GLY LYS LYS MET SEQRES 20 A 297 SER GLN LYS ASN GLY GLN PRO ILE ILE PRO VAL LEU LEU SEQRES 21 A 297 PRO LYS TYR ILE GLY LEU ASP PRO ILE SER PRO GLY ASP SEQRES 22 A 297 LEU THR MET VAL ILE THR PRO ASP TYR ASP ASP SER HIS SEQRES 23 A 297 SER PRO ALA SER CYS SER TYR LEU SER GLU LYS FORMUL 2 HOH *119(H2 O) HELIX 1 AA1 ASP A 60 THR A 65 1 6 HELIX 2 AA2 SER A 107 LEU A 117 1 11 HELIX 3 AA3 LEU A 147 GLY A 153 1 7 HELIX 4 AA4 GLN A 159 LEU A 163 1 5 HELIX 5 AA5 ILE A 237 MET A 244 1 8 HELIX 6 AA6 GLN A 245 PHE A 247 5 3 HELIX 7 AA7 PRO A 254 LYS A 256 5 3 HELIX 8 AA8 PRO A 264 GLY A 273 1 10 HELIX 9 AA9 SER A 299 LEU A 303 5 5 SHEET 1 AA1 4 VAL A 54 ALA A 55 0 SHEET 2 AA1 4 THR A 173 PRO A 185 1 O LEU A 181 N VAL A 54 SHEET 3 AA1 4 SER A 71 SER A 83 -1 N ILE A 74 O VAL A 182 SHEET 4 AA1 4 LYS A 86 ALA A 101 -1 O ILE A 94 N ALA A 77 SHEET 1 AA2 3 SER A 119 PHE A 125 0 SHEET 2 AA2 3 LEU A 132 LEU A 138 -1 O LEU A 138 N SER A 119 SHEET 3 AA2 3 ASN A 154 LEU A 158 -1 O PHE A 157 N VAL A 133 SHEET 1 AA3 3 VAL A 216 LEU A 217 0 SHEET 2 AA3 3 PRO A 205 SER A 208 -1 N LEU A 207 O VAL A 216 SHEET 3 AA3 3 THR A 304 ILE A 307 -1 O THR A 304 N SER A 208 SHEET 1 AA4 3 LYS A 248 ASP A 253 0 SHEET 2 AA4 3 ILE A 258 GLU A 262 -1 O GLU A 262 N LYS A 248 SHEET 3 AA4 3 ILE A 284 LEU A 288 -1 O VAL A 287 N ILE A 259 CRYST1 64.247 91.005 48.433 90.00 96.06 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015565 0.000000 0.001652 0.00000 SCALE2 0.000000 0.010988 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020763 0.00000