HEADER CYTOSOLIC PROTEIN 12-SEP-22 8B1V TITLE DIHYDROPRECONDYLOCARPINE ACETATE SYNTHASE 2 FROM TABERNANTHE IBOGA COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROPRECONDYLOCARPINE ACETATE SYNTHASE 2; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TABERNANTHE IBOGA; SOURCE 3 ORGANISM_TAXID: 141617; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ALCOHOL DEHYDROGENASE, CYTOSOLIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.LANGLEY,J.BASQUIN,L.CAPUTI,S.E.O'CONNOR REVDAT 4 31-JAN-24 8B1V 1 REMARK REVDAT 3 30-NOV-22 8B1V 1 JRNL REVDAT 2 16-NOV-22 8B1V 1 JRNL REVDAT 1 19-OCT-22 8B1V 0 JRNL AUTH C.LANGLEY,E.TATSIS,B.HONG,Y.NAKAMURA,C.PAETZ, JRNL AUTH 2 C.E.M.STEVENSON,J.BASQUIN,D.M.LAWSON,L.CAPUTI,S.E.O'CONNOR JRNL TITL EXPANSION OF THE CATALYTIC REPERTOIRE OF ALCOHOL JRNL TITL 2 DEHYDROGENASES IN PLANT METABOLISM. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 61 10934 2022 JRNL REFN ESSN 1521-3773 JRNL PMID 36198083 JRNL DOI 10.1002/ANIE.202210934 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.V.AFONINE,R.W.GROSSE-KUNSTLEVE,N.ECHOLS,J.J.HEADD, REMARK 1 AUTH 2 N.W.MORIARTY,M.MUSTYAKIMOV,T.C.TERWILLIGER,A.URZHUMTSEV, REMARK 1 AUTH 3 P.H.ZWART,P.D.ADAMS REMARK 1 TITL TOWARDS AUTOMATED CRYSTALLOGRAPHIC STRUCTURE REFINEMENT WITH REMARK 1 TITL 2 PHENIX.REFINE. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 68 352 2012 REMARK 1 REFN ESSN 1399-0047 REMARK 1 PMID 22505256 REMARK 1 DOI 10.1107/S0907444912001308 REMARK 1 REFERENCE 2 REMARK 1 AUTH D.LIEBSCHNER,P.V.AFONINE,M.L.BAKER,G.BUNKOCZI,V.B.CHEN, REMARK 1 AUTH 2 T.I.CROLL,B.HINTZE,L.W.HUNG,S.JAIN,A.J.MCCOY,N.W.MORIARTY, REMARK 1 AUTH 3 R.D.OEFFNER,B.K.POON,M.G.PRISANT,R.J.READ,J.S.RICHARDSON, REMARK 1 AUTH 4 D.C.RICHARDSON,M.D.SAMMITO,O.V.SOBOLEV,D.H.STOCKWELL, REMARK 1 AUTH 5 T.C.TERWILLIGER,A.G.URZHUMTSEV,L.L.VIDEAU,C.J.WILLIAMS, REMARK 1 AUTH 6 P.D.ADAMS REMARK 1 TITL MACROMOLECULAR STRUCTURE DETERMINATION USING X-RAYS, REMARK 1 TITL 2 NEUTRONS AND ELECTRONS: RECENT DEVELOPMENTS IN PHENIX. REMARK 1 REF ACTA CRYSTALLOGR D STRUCT V. 75 861 2019 REMARK 1 REF 2 BIOL REMARK 1 REFN ISSN 2059-7983 REMARK 1 PMID 31588918 REMARK 1 DOI 10.1107/S2059798319011471 REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19RC6_4061 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 62174 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 5905 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.8100 - 5.8400 1.00 3777 201 0.1769 0.1664 REMARK 3 2 5.8400 - 4.6400 1.00 3776 193 0.1583 0.1610 REMARK 3 3 4.6400 - 4.0500 1.00 3754 201 0.1479 0.1658 REMARK 3 4 4.0500 - 3.6800 1.00 3799 196 0.1611 0.1675 REMARK 3 5 3.6800 - 3.4200 1.00 3774 198 0.1741 0.1841 REMARK 3 6 3.4200 - 3.2200 1.00 3780 194 0.1927 0.2231 REMARK 3 7 3.2200 - 3.0600 1.00 3759 203 0.2114 0.2380 REMARK 3 8 3.0600 - 2.9200 1.00 3771 196 0.2041 0.2206 REMARK 3 9 2.9200 - 2.8100 1.00 3788 203 0.2187 0.2623 REMARK 3 10 2.8100 - 2.7100 1.00 3768 196 0.2142 0.2961 REMARK 3 11 2.7100 - 2.6300 1.00 3771 197 0.2179 0.2366 REMARK 3 12 2.6300 - 2.5500 1.00 3782 198 0.2149 0.2551 REMARK 3 13 2.5500 - 2.4900 1.00 3805 205 0.2208 0.2375 REMARK 3 14 2.4900 - 2.4300 1.00 3714 194 0.2137 0.2474 REMARK 3 15 2.4300 - 2.3700 1.00 3838 204 0.2270 0.3154 REMARK 3 16 2.3700 - 2.3200 1.00 3787 189 0.2290 0.3271 REMARK 3 17 2.3200 - 2.2700 1.00 3690 192 0.2295 0.2711 REMARK 3 18 2.2700 - 2.2300 1.00 3840 200 0.2419 0.2702 REMARK 3 19 2.2300 - 2.1900 1.00 3765 196 0.2641 0.2631 REMARK 3 20 2.1900 - 2.1500 1.00 3755 200 0.2667 0.2914 REMARK 3 21 2.1500 - 2.1200 1.00 3809 197 0.2726 0.3187 REMARK 3 22 2.1200 - 2.0900 1.00 3745 195 0.2762 0.2766 REMARK 3 23 2.0900 - 2.0600 1.00 3820 199 0.2838 0.3227 REMARK 3 24 2.0600 - 2.0300 1.00 3752 198 0.2962 0.2962 REMARK 3 25 2.0300 - 2.0000 1.00 3768 198 0.3202 0.3232 REMARK 3 26 2.0000 - 1.9700 1.00 3753 195 0.3478 0.3650 REMARK 3 27 1.9700 - 1.9500 1.00 3807 202 0.3934 0.4173 REMARK 3 28 1.9500 - 1.9300 1.00 3719 194 0.4344 0.4448 REMARK 3 29 1.9300 - 1.9000 1.00 3806 196 0.4708 0.5032 REMARK 3 30 1.9000 - 1.8820 0.87 3309 175 0.6013 0.7557 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.337 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.297 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.94 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 5447 REMARK 3 ANGLE : 0.778 7432 REMARK 3 CHIRALITY : 0.053 876 REMARK 3 PLANARITY : 0.007 952 REMARK 3 DIHEDRAL : 5.583 764 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 5 through 12 or REMARK 3 (resid 13 and (name N or name CA or name REMARK 3 C or name O or name CB or name CG )) or REMARK 3 resid 14 through 81 or (resid 82 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB or name CG or name CD )) or resid REMARK 3 83 through 88 or (resid 89 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 90 or (resid 91 and (name N or REMARK 3 name CA or name C or name O or name CB or REMARK 3 name CG )) or resid 92 through 120 or REMARK 3 (resid 121 and (name N or name CA or name REMARK 3 C or name O or name CB or name CG )) or REMARK 3 resid 122 through 146 or (resid 147 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB or name CG or name OD1)) or resid REMARK 3 148 through 152 or (resid 153 and (name N REMARK 3 or name CA or name C or name O or name CB REMARK 3 or name CG )) or resid 154 through 155 or REMARK 3 (resid 156 and (name N or name CA or name REMARK 3 C or name O or name CB )) or (resid 157 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB or name CG )) or resid 158 REMARK 3 through 186 or (resid 187 and (name N or REMARK 3 name CA or name C or name O or name CB or REMARK 3 name CG1 or name CG2)) or resid 188 REMARK 3 through 205 or (resid 206 and (name N or REMARK 3 name CA or name C or name O or name CB or REMARK 3 name CG )) or resid 207 through 227 or REMARK 3 (resid 228 and (name N or name CA or name REMARK 3 C or name O or name CB or name CG )) or REMARK 3 resid 229 through 262 or (resid 263 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB or name CG1 or name CG2)) or REMARK 3 resid 264 through 283 or (resid 284 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB )) or resid 285 through 288 or REMARK 3 (resid 289 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 290 or REMARK 3 (resid 291 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 292 REMARK 3 through 362 or resid 401)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 5 through 6 or REMARK 3 (resid 7 and (name N or name CA or name C REMARK 3 or name O or name CB or name CG or name REMARK 3 CD )) or (resid 8 and (name N or name CA REMARK 3 or name C or name O )) or resid 9 through REMARK 3 30 or (resid 31 and (name N or name CA or REMARK 3 name C or name O or name CB or name CG or REMARK 3 name CD )) or resid 32 through 44 or REMARK 3 (resid 45 and (name N or name CA or name REMARK 3 C or name O or name CB or name CG or name REMARK 3 CD )) or resid 46 through 89 or (resid 90 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB or name CG1 or name CG2)) or REMARK 3 resid 91 through 183 or (resid 184 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB )) or resid 185 through 237 or REMARK 3 (resid 238 and (name N or name CA or name REMARK 3 C or name O or name CB or name CG )) or REMARK 3 resid 239 through 240 or (resid 241 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB )) or resid 242 through 243 or REMARK 3 (resid 244 through 246 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 247 through 286 or (resid 287 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB )) or resid 288 through 362 REMARK 3 or resid 401)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8B1V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1292125571. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62174 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.882 REMARK 200 RESOLUTION RANGE LOW (A) : 39.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 13.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5FI3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17% W/V PEG 3350, 200 MM AMMONIUM REMARK 280 CHLORIDE AND 0.75 MM ANGRYLINE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.44400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.40050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.81200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.40050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.44400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.81200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLY A 3 REMARK 465 LYS A 4 REMARK 465 PRO A 363 REMARK 465 GLU A 364 REMARK 465 PRO A 365 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 GLY B 3 REMARK 465 LYS B 4 REMARK 465 PRO B 363 REMARK 465 GLU B 364 REMARK 465 PRO B 365 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 7 OE1 OE2 REMARK 470 GLU A 8 CB CG CD OE1 OE2 REMARK 470 LYS A 13 CE NZ REMARK 470 LYS A 31 CE NZ REMARK 470 LYS A 45 CE NZ REMARK 470 GLU A 64 CD OE1 OE2 REMARK 470 LYS A 86 CE NZ REMARK 470 ILE A 90 CD1 REMARK 470 LYS A 91 CE NZ REMARK 470 LYS A 107 CD CE NZ REMARK 470 ARG A 153 NH1 NH2 REMARK 470 GLU A 156 CD OE1 OE2 REMARK 470 LYS A 157 NZ REMARK 470 LYS A 184 CG CD CE NZ REMARK 470 LYS A 206 NZ REMARK 470 ARG A 238 CD NE CZ NH1 NH2 REMARK 470 ASP A 240 CG OD1 OD2 REMARK 470 LYS A 241 CG CD CE NZ REMARK 470 ARG A 244 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 284 CD CE NZ REMARK 470 GLU A 287 CG CD OE1 OE2 REMARK 470 LEU A 288 CD2 REMARK 470 LYS A 309 CD CE NZ REMARK 470 GLU A 320 CD OE1 OE2 REMARK 470 GLU B 8 CG CD OE1 OE2 REMARK 470 LYS B 13 CD CE NZ REMARK 470 LYS B 31 NZ REMARK 470 LYS B 45 NZ REMARK 470 GLU B 64 CD OE1 OE2 REMARK 470 GLU B 82 OE1 OE2 REMARK 470 LYS B 86 CE NZ REMARK 470 LYS B 89 CG CD CE NZ REMARK 470 LYS B 91 CD CE NZ REMARK 470 LYS B 107 CD CE NZ REMARK 470 GLU B 121 CD OE1 OE2 REMARK 470 ASN B 147 ND2 REMARK 470 ARG B 153 CD NE CZ NH1 NH2 REMARK 470 GLU B 156 CG CD OE1 OE2 REMARK 470 LYS B 157 CD CE NZ REMARK 470 LYS B 184 CD CE NZ REMARK 470 ILE B 187 CD1 REMARK 470 LYS B 206 CD CE NZ REMARK 470 ASN B 228 OD1 ND2 REMARK 470 ARG B 238 NE CZ NH1 NH2 REMARK 470 ASP B 240 CG OD1 OD2 REMARK 470 LYS B 241 CE NZ REMARK 470 ARG B 244 CZ NH1 NH2 REMARK 470 ILE B 263 CD1 REMARK 470 LYS B 284 CG CD CE NZ REMARK 470 GLU B 287 CD OE1 OE2 REMARK 470 LEU B 288 CD2 REMARK 470 PRO B 289 CG CD REMARK 470 ILE B 291 CG1 CG2 CD1 REMARK 470 LYS B 309 CD CE NZ REMARK 470 GLU B 320 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 549 O HOH A 606 1.87 REMARK 500 OE1 GLU B 328 O HOH B 501 1.89 REMARK 500 O HOH A 505 O HOH A 562 1.90 REMARK 500 O HOH A 629 O HOH B 614 1.98 REMARK 500 O HOH B 587 O HOH B 590 2.05 REMARK 500 OE2 GLU A 224 O HOH A 501 2.15 REMARK 500 O PRO A 362 O HOH A 502 2.16 REMARK 500 O SER A 220 O HOH A 503 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 32 -159.30 -157.48 REMARK 500 SER A 168 -57.66 -131.79 REMARK 500 LEU A 182 32.19 -93.84 REMARK 500 LEU A 194 68.54 -113.86 REMARK 500 ALA A 305 -142.16 49.09 REMARK 500 ASP A 346 59.89 -91.27 REMARK 500 SER B 168 -58.19 -130.73 REMARK 500 LEU B 182 31.85 -93.30 REMARK 500 LEU B 194 67.35 -113.86 REMARK 500 ALA B 305 -141.05 48.49 REMARK 500 ASP B 346 59.78 -91.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 105 SG REMARK 620 2 CYS A 108 SG 108.2 REMARK 620 3 CYS A 111 SG 112.9 105.2 REMARK 620 4 CYS A 119 SG 108.4 117.4 104.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 105 SG REMARK 620 2 CYS B 108 SG 110.6 REMARK 620 3 CYS B 111 SG 111.8 102.9 REMARK 620 4 CYS B 119 SG 108.9 116.0 106.6 REMARK 620 N 1 2 3 DBREF1 8B1V A 1 365 UNP A0A5B8X8Z0_TABIB DBREF2 8B1V A A0A5B8X8Z0 1 365 DBREF1 8B1V B 1 365 UNP A0A5B8X8Z0_TABIB DBREF2 8B1V B A0A5B8X8Z0 1 365 SEQADV 8B1V HIS A 188 UNP A0A5B8X8Z GLN 188 CONFLICT SEQADV 8B1V HIS B 188 UNP A0A5B8X8Z GLN 188 CONFLICT SEQRES 1 A 365 MET ALA GLY LYS SER PRO GLU GLU GLU HIS PRO VAL LYS SEQRES 2 A 365 ALA TYR GLY TRP ALA VAL LYS ASP ARG THR THR GLY ILE SEQRES 3 A 365 LEU SER PRO PHE LYS PHE SER ARG ARG ALA THR GLY ASP SEQRES 4 A 365 ASN ASP ILE ARG ILE LYS ILE LEU TYR CYS GLY ILE CYS SEQRES 5 A 365 HIS THR ASP LEU THR SER VAL LYS ASN GLU TYR GLU PHE SEQRES 6 A 365 LEU SER TYR PRO LEU VAL PRO GLY MET GLU ILE VAL GLY SEQRES 7 A 365 ILE ALA THR GLU VAL GLY SER LYS VAL THR LYS ILE LYS SEQRES 8 A 365 VAL GLY GLU LYS VAL ALA VAL ALA ALA TYR LEU GLY THR SEQRES 9 A 365 CYS GLY LYS CYS TYR ASN CYS VAL ASN ASP LEU GLU ASN SEQRES 10 A 365 TYR CYS PRO GLU VAL ILE ILE GLY TYR GLY THR PRO TYR SEQRES 11 A 365 HIS ASP GLY THR ILE ASN TYR GLY GLY LEU SER ASN GLU SEQRES 12 A 365 THR VAL VAL ASN GLU ARG PHE VAL LEU ARG PHE PRO GLU SEQRES 13 A 365 LYS LEU SER PRO ALA GLY GLY ALA PRO LEU LEU SER ALA SEQRES 14 A 365 GLY ILE THR ALA TYR SER ALA MET ARG ASN HIS GLY LEU SEQRES 15 A 365 ASP LYS PRO GLY ILE HIS LEU GLY VAL VAL GLY LEU GLY SEQRES 16 A 365 GLY LEU GLY HIS LEU ALA VAL LYS PHE ALA LYS ALA PHE SEQRES 17 A 365 GLY VAL ARG VAL THR VAL ILE SER THR THR PRO SER LYS SEQRES 18 A 365 LYS ASP GLU ALA ILE ASN ASN LEU GLY ALA ASP ALA PHE SEQRES 19 A 365 LEU PHE SER ARG ASP ASP LYS GLN MET ARG ALA ALA ILE SEQRES 20 A 365 GLY THR PHE ASP ALA ILE ILE ASP THR LEU ALA VAL VAL SEQRES 21 A 365 HIS PRO ILE ALA PRO LEU LEU ASP LEU LEU ARG SER HIS SEQRES 22 A 365 GLY LYS LEU VAL LEU VAL GLY ALA PRO SER LYS PRO LEU SEQRES 23 A 365 GLU LEU PRO THR ILE PRO LEU LEU SER GLY GLY LYS SER SEQRES 24 A 365 LEU ILE GLY SER ALA ALA GLY ASN VAL LYS GLN THR GLN SEQRES 25 A 365 GLU MET LEU ASP PHE ALA ALA GLU HIS ASP ILE THR ALA SEQRES 26 A 365 ASN ILE GLU VAL ILE PRO ILE ASP TYR ILE ASN THR ALA SEQRES 27 A 365 MET GLU ARG LEU ASP LYS GLY ASP ILE ARG PHE ARG PHE SEQRES 28 A 365 VAL VAL ASP ILE GLU ASN THR LEU THR PRO PRO PRO GLU SEQRES 29 A 365 PRO SEQRES 1 B 365 MET ALA GLY LYS SER PRO GLU GLU GLU HIS PRO VAL LYS SEQRES 2 B 365 ALA TYR GLY TRP ALA VAL LYS ASP ARG THR THR GLY ILE SEQRES 3 B 365 LEU SER PRO PHE LYS PHE SER ARG ARG ALA THR GLY ASP SEQRES 4 B 365 ASN ASP ILE ARG ILE LYS ILE LEU TYR CYS GLY ILE CYS SEQRES 5 B 365 HIS THR ASP LEU THR SER VAL LYS ASN GLU TYR GLU PHE SEQRES 6 B 365 LEU SER TYR PRO LEU VAL PRO GLY MET GLU ILE VAL GLY SEQRES 7 B 365 ILE ALA THR GLU VAL GLY SER LYS VAL THR LYS ILE LYS SEQRES 8 B 365 VAL GLY GLU LYS VAL ALA VAL ALA ALA TYR LEU GLY THR SEQRES 9 B 365 CYS GLY LYS CYS TYR ASN CYS VAL ASN ASP LEU GLU ASN SEQRES 10 B 365 TYR CYS PRO GLU VAL ILE ILE GLY TYR GLY THR PRO TYR SEQRES 11 B 365 HIS ASP GLY THR ILE ASN TYR GLY GLY LEU SER ASN GLU SEQRES 12 B 365 THR VAL VAL ASN GLU ARG PHE VAL LEU ARG PHE PRO GLU SEQRES 13 B 365 LYS LEU SER PRO ALA GLY GLY ALA PRO LEU LEU SER ALA SEQRES 14 B 365 GLY ILE THR ALA TYR SER ALA MET ARG ASN HIS GLY LEU SEQRES 15 B 365 ASP LYS PRO GLY ILE HIS LEU GLY VAL VAL GLY LEU GLY SEQRES 16 B 365 GLY LEU GLY HIS LEU ALA VAL LYS PHE ALA LYS ALA PHE SEQRES 17 B 365 GLY VAL ARG VAL THR VAL ILE SER THR THR PRO SER LYS SEQRES 18 B 365 LYS ASP GLU ALA ILE ASN ASN LEU GLY ALA ASP ALA PHE SEQRES 19 B 365 LEU PHE SER ARG ASP ASP LYS GLN MET ARG ALA ALA ILE SEQRES 20 B 365 GLY THR PHE ASP ALA ILE ILE ASP THR LEU ALA VAL VAL SEQRES 21 B 365 HIS PRO ILE ALA PRO LEU LEU ASP LEU LEU ARG SER HIS SEQRES 22 B 365 GLY LYS LEU VAL LEU VAL GLY ALA PRO SER LYS PRO LEU SEQRES 23 B 365 GLU LEU PRO THR ILE PRO LEU LEU SER GLY GLY LYS SER SEQRES 24 B 365 LEU ILE GLY SER ALA ALA GLY ASN VAL LYS GLN THR GLN SEQRES 25 B 365 GLU MET LEU ASP PHE ALA ALA GLU HIS ASP ILE THR ALA SEQRES 26 B 365 ASN ILE GLU VAL ILE PRO ILE ASP TYR ILE ASN THR ALA SEQRES 27 B 365 MET GLU ARG LEU ASP LYS GLY ASP ILE ARG PHE ARG PHE SEQRES 28 B 365 VAL VAL ASP ILE GLU ASN THR LEU THR PRO PRO PRO GLU SEQRES 29 B 365 PRO HET ORZ A 401 29 HET ZN A 402 1 HET ORZ B 401 29 HET ZN B 402 1 HETNAM ORZ PRECONDYLOCARPINE ACETATE HETNAM ZN ZINC ION HETSYN ORZ METHYL (1~{S},2~{S},16~{E})-2-(ACETYLOXYMETHYL)-16- HETSYN 2 ORZ ETHYLIDENE-4-AZA-14-AZONIATETRACYCLO[12.2.2.0^{3, HETSYN 3 ORZ 11}.0^{5,10}]OCTADECA-3(11),5(10),6,8,14-PENTAENE-2- HETSYN 4 ORZ CARBOXYLATE FORMUL 3 ORZ 2(C23 H27 N2 O4 1+) FORMUL 4 ZN 2(ZN 2+) FORMUL 7 HOH *246(H2 O) HELIX 1 AA1 SER A 5 HIS A 10 1 6 HELIX 2 AA2 CYS A 52 LYS A 60 1 9 HELIX 3 AA3 CYS A 108 ASN A 113 1 6 HELIX 4 AA4 LEU A 115 CYS A 119 5 5 HELIX 5 AA5 SER A 159 ALA A 164 1 6 HELIX 6 AA6 PRO A 165 LEU A 167 5 3 HELIX 7 AA7 SER A 168 HIS A 180 1 13 HELIX 8 AA8 GLY A 195 GLY A 209 1 15 HELIX 9 AA9 THR A 218 SER A 220 5 3 HELIX 10 AB1 LYS A 221 ASN A 228 1 8 HELIX 11 AB2 ASP A 239 ALA A 246 1 8 HELIX 12 AB3 ILE A 263 LEU A 269 1 7 HELIX 13 AB4 PRO A 289 GLY A 297 1 9 HELIX 14 AB5 ASN A 307 ASP A 322 1 16 HELIX 15 AB6 PRO A 331 ASP A 333 5 3 HELIX 16 AB7 TYR A 334 LYS A 344 1 11 HELIX 17 AB8 ILE A 355 LEU A 359 1 5 HELIX 18 AB9 CYS B 52 LYS B 60 1 9 HELIX 19 AC1 CYS B 108 ASN B 113 1 6 HELIX 20 AC2 LEU B 115 CYS B 119 5 5 HELIX 21 AC3 SER B 159 ALA B 164 1 6 HELIX 22 AC4 PRO B 165 LEU B 167 5 3 HELIX 23 AC5 SER B 168 HIS B 180 1 13 HELIX 24 AC6 GLY B 195 GLY B 209 1 15 HELIX 25 AC7 THR B 218 SER B 220 5 3 HELIX 26 AC8 LYS B 221 ASN B 227 1 7 HELIX 27 AC9 ASP B 239 ALA B 246 1 8 HELIX 28 AD1 ILE B 263 LEU B 269 1 7 HELIX 29 AD2 PRO B 289 GLY B 297 1 9 HELIX 30 AD3 ASN B 307 ASP B 322 1 16 HELIX 31 AD4 PRO B 331 ASP B 333 5 3 HELIX 32 AD5 TYR B 334 LYS B 344 1 11 HELIX 33 AD6 ILE B 355 LEU B 359 1 5 SHEET 1 AA1 2 VAL A 12 VAL A 19 0 SHEET 2 AA1 2 LEU A 27 ARG A 34 -1 O ARG A 34 N VAL A 12 SHEET 1 AA2 5 GLU A 143 ASN A 147 0 SHEET 2 AA2 5 ASP A 41 ILE A 51 -1 N ILE A 44 O THR A 144 SHEET 3 AA2 5 GLU A 75 VAL A 83 -1 O GLU A 82 N ARG A 43 SHEET 4 AA2 5 LYS A 95 VAL A 98 -1 O VAL A 96 N GLY A 78 SHEET 5 AA2 5 VAL A 151 ARG A 153 -1 O LEU A 152 N ALA A 97 SHEET 1 AA3 4 GLU A 143 ASN A 147 0 SHEET 2 AA3 4 ASP A 41 ILE A 51 -1 N ILE A 44 O THR A 144 SHEET 3 AA3 4 ARG A 350 ASP A 354 -1 O VAL A 353 N CYS A 49 SHEET 4 AA3 4 ILE A 327 ILE A 330 1 N ILE A 330 O ASP A 354 SHEET 1 AA4 2 TYR A 101 GLY A 103 0 SHEET 2 AA4 2 ILE A 123 ILE A 124 -1 O ILE A 123 N GLY A 103 SHEET 1 AA512 ALA A 233 PHE A 236 0 SHEET 2 AA512 ARG A 211 SER A 216 1 N VAL A 214 O LEU A 235 SHEET 3 AA512 HIS A 188 VAL A 192 1 N VAL A 191 O ILE A 215 SHEET 4 AA512 PHE A 250 ASP A 255 1 O ILE A 254 N GLY A 190 SHEET 5 AA512 LEU A 270 LEU A 278 1 O VAL A 277 N ASP A 255 SHEET 6 AA512 SER A 299 GLY A 302 1 O ILE A 301 N LEU A 278 SHEET 7 AA512 SER B 299 GLY B 302 -1 O LEU B 300 N LEU A 300 SHEET 8 AA512 LEU B 270 LEU B 278 1 N LEU B 278 O ILE B 301 SHEET 9 AA512 PHE B 250 ASP B 255 1 N ILE B 253 O VAL B 277 SHEET 10 AA512 HIS B 188 VAL B 192 1 N GLY B 190 O ILE B 254 SHEET 11 AA512 ARG B 211 SER B 216 1 O ARG B 211 N LEU B 189 SHEET 12 AA512 ALA B 233 PHE B 236 1 O LEU B 235 N VAL B 214 SHEET 1 AA6 2 LEU A 286 LEU A 288 0 SHEET 2 AA6 2 LEU B 286 LEU B 288 -1 O LEU B 288 N LEU A 286 SHEET 1 AA7 2 VAL B 12 VAL B 19 0 SHEET 2 AA7 2 LEU B 27 ARG B 34 -1 O ARG B 34 N VAL B 12 SHEET 1 AA8 5 GLU B 143 ASN B 147 0 SHEET 2 AA8 5 ASP B 41 ILE B 51 -1 N ILE B 44 O THR B 144 SHEET 3 AA8 5 GLU B 75 VAL B 83 -1 O ILE B 79 N LYS B 45 SHEET 4 AA8 5 LYS B 95 VAL B 98 -1 O VAL B 96 N GLY B 78 SHEET 5 AA8 5 VAL B 151 ARG B 153 -1 O LEU B 152 N ALA B 97 SHEET 1 AA9 4 GLU B 143 ASN B 147 0 SHEET 2 AA9 4 ASP B 41 ILE B 51 -1 N ILE B 44 O THR B 144 SHEET 3 AA9 4 ARG B 350 ASP B 354 -1 O VAL B 353 N CYS B 49 SHEET 4 AA9 4 ILE B 327 ILE B 330 1 N ILE B 330 O VAL B 352 SHEET 1 AB1 2 TYR B 101 GLY B 103 0 SHEET 2 AB1 2 ILE B 123 ILE B 124 -1 O ILE B 123 N GLY B 103 LINK SG CYS A 105 ZN ZN A 402 1555 1555 2.33 LINK SG CYS A 108 ZN ZN A 402 1555 1555 2.32 LINK SG CYS A 111 ZN ZN A 402 1555 1555 2.33 LINK SG CYS A 119 ZN ZN A 402 1555 1555 2.33 LINK SG CYS B 105 ZN ZN B 402 1555 1555 2.33 LINK SG CYS B 108 ZN ZN B 402 1555 1555 2.34 LINK SG CYS B 111 ZN ZN B 402 1555 1555 2.32 LINK SG CYS B 119 ZN ZN B 402 1555 1555 2.34 CISPEP 1 TYR A 68 PRO A 69 0 7.51 CISPEP 2 ARG A 348 PHE A 349 0 7.63 CISPEP 3 TYR B 68 PRO B 69 0 7.01 CISPEP 4 ARG B 348 PHE B 349 0 7.77 CRYST1 72.888 79.624 130.801 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013720 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012559 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007645 0.00000 MTRIX1 1 -0.999928 -0.000095 -0.012001 109.88487 1 MTRIX2 1 -0.001059 0.996768 0.080332 -7.73615 1 MTRIX3 1 0.011954 0.080339 -0.996696 187.94630 1