HEADER OXIDOREDUCTASE 13-SEP-22 8B2D TITLE CRYSTAL STRUCTURE OF BACTERIAL FLAVIN CONTAINING MONOOXYGENASE TITLE 2 THERMORESISTANT MUTANT, IN COMPLEX WITH NADP+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLAVIN-CONTAINING MONOOXYGENASE, FMO; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.14.13.8; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHYLOPHAGA AMINISULFIDIVORANS MP; SOURCE 3 ORGANISM_TAXID: 1026882; SOURCE 4 GENE: MAMP_00532; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI MC1061; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 1211845 KEYWDS THERMORESISTANT MUTANT, COMPLEX, FLAVIN ADENINE DINUCLEOTIDE, KEYWDS 2 NICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR I.CEA-RAMA,J.SANZ-APARICIO,M.FERRER MARTINEZ,M.GORIS,G.BJERGA REVDAT 3 07-FEB-24 8B2D 1 REMARK REVDAT 2 12-JUL-23 8B2D 1 JRNL REVDAT 1 14-JUN-23 8B2D 0 JRNL AUTH M.GORIS,I.CEA-RAMA,P.PUNTERVOLL,R.REE,D.ALMENDRAL, JRNL AUTH 2 J.SANZ-APARICIO,M.FERRER,G.E.K.BJERGA JRNL TITL INCREASED THERMOSTABILITY OF AN ENGINEERED FLAVIN-CONTAINING JRNL TITL 2 MONOOXYGENASE TO REMEDIATE TRIMETHYLAMINE IN FISH PROTEIN JRNL TITL 3 HYDROLYSATES. JRNL REF APPL.ENVIRON.MICROBIOL. V. 89 39023 2023 JRNL REFN ESSN 1098-5336 JRNL PMID 37222584 JRNL DOI 10.1128/AEM.00390-23 REMARK 2 REMARK 2 RESOLUTION. 1.62 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.62 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.27 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 113948 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6049 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.62 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.66 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8361 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.2070 REMARK 3 BIN FREE R VALUE SET COUNT : 416 REMARK 3 BIN FREE R VALUE : 0.2250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7337 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 264 REMARK 3 SOLVENT ATOMS : 495 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.74000 REMARK 3 B22 (A**2) : 0.57000 REMARK 3 B33 (A**2) : 0.17000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.084 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.079 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.052 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.505 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.965 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7858 ; 0.008 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 6830 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10696 ; 1.434 ; 1.655 REMARK 3 BOND ANGLES OTHERS (DEGREES): 15789 ; 1.446 ; 1.584 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 894 ; 6.830 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 451 ;31.506 ;22.528 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1215 ;12.371 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 44 ;13.603 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 968 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8865 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1915 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 2 444 B 2 444 15825 0.050 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 8B2D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1292125601. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAY-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979264 REMARK 200 MONOCHROMATOR : SI(111) CHANNEL-CUT, CRYOCOOLED REMARK 200 OPTICS : KB FOCUSING MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 120046 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.620 REMARK 200 RESOLUTION RANGE LOW (A) : 45.270 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.90 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.62 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.65 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.70100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.6.04 REMARK 200 STARTING MODEL: 2XVE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M (NH4)SO4, 0.1M BIS-TRIS PH 6.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.82650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 57.82650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 62.80300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 65.18050 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 62.80300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 65.18050 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 57.82650 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 62.80300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 65.18050 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 57.82650 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 62.80300 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 65.18050 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -66.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 B 503 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 449 REMARK 465 ILE A 450 REMARK 465 PRO A 451 REMARK 465 VAL A 452 REMARK 465 ALA A 453 REMARK 465 LYS A 454 REMARK 465 GLU A 455 REMARK 465 ALA A 456 REMARK 465 LEU A 457 REMARK 465 GLU A 458 REMARK 465 HIS A 459 REMARK 465 HIS A 460 REMARK 465 HIS A 461 REMARK 465 HIS A 462 REMARK 465 HIS A 463 REMARK 465 HIS A 464 REMARK 465 MET B 1 REMARK 465 ASP B 446 REMARK 465 LYS B 447 REMARK 465 SER B 448 REMARK 465 GLU B 449 REMARK 465 ILE B 450 REMARK 465 PRO B 451 REMARK 465 VAL B 452 REMARK 465 ALA B 453 REMARK 465 LYS B 454 REMARK 465 GLU B 455 REMARK 465 ALA B 456 REMARK 465 LEU B 457 REMARK 465 GLU B 458 REMARK 465 HIS B 459 REMARK 465 HIS B 460 REMARK 465 HIS B 461 REMARK 465 HIS B 462 REMARK 465 HIS B 463 REMARK 465 HIS B 464 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 72 124.72 -37.04 REMARK 500 TYR A 84 89.65 -158.90 REMARK 500 HIS A 164 23.71 -146.26 REMARK 500 SER A 205 27.09 -146.96 REMARK 500 SER A 206 -158.77 -119.97 REMARK 500 THR A 230 -59.33 -122.49 REMARK 500 ASP A 251 -154.53 -119.89 REMARK 500 CYS A 271 50.95 -100.76 REMARK 500 VAL A 302 -38.41 -136.68 REMARK 500 TRP A 319 -62.27 -98.68 REMARK 500 SER A 321 -92.48 -130.54 REMARK 500 LYS A 363 -54.53 -122.61 REMARK 500 ASN A 407 105.27 -164.42 REMARK 500 SER B 72 124.44 -36.11 REMARK 500 TYR B 84 87.84 -158.54 REMARK 500 HIS B 164 22.56 -145.82 REMARK 500 SER B 205 27.18 -143.83 REMARK 500 SER B 206 -158.04 -121.51 REMARK 500 THR B 230 -57.31 -122.92 REMARK 500 ASP B 251 -153.46 -121.77 REMARK 500 CYS B 271 52.66 -102.68 REMARK 500 VAL B 302 -36.18 -136.41 REMARK 500 TRP B 319 -63.11 -98.37 REMARK 500 SER B 321 -92.06 -135.10 REMARK 500 LYS B 363 -54.29 -123.07 REMARK 500 ASN B 407 104.72 -166.03 REMARK 500 REMARK 500 REMARK: NULL DBREF 8B2D A 1 456 UNP F5SYD3 F5SYD3_9GAMM 1 456 DBREF 8B2D B 1 456 UNP F5SYD3 F5SYD3_9GAMM 1 456 SEQADV 8B2D PRO A 95 UNP F5SYD3 ALA 95 ENGINEERED MUTATION SEQADV 8B2D THR A 135 UNP F5SYD3 SER 135 ENGINEERED MUTATION SEQADV 8B2D GLY A 197 UNP F5SYD3 ASP 197 ENGINEERED MUTATION SEQADV 8B2D VAL A 224 UNP F5SYD3 LEU 224 ENGINEERED MUTATION SEQADV 8B2D ASP A 236 UNP F5SYD3 LYS 236 ENGINEERED MUTATION SEQADV 8B2D GLY A 252 UNP F5SYD3 THR 252 ENGINEERED MUTATION SEQADV 8B2D ASP A 290 UNP F5SYD3 ASN 290 ENGINEERED MUTATION SEQADV 8B2D PRO A 296 UNP F5SYD3 LEU 296 ENGINEERED MUTATION SEQADV 8B2D ILE A 340 UNP F5SYD3 LEU 340 ENGINEERED MUTATION SEQADV 8B2D GLN A 353 UNP F5SYD3 MET 353 ENGINEERED MUTATION SEQADV 8B2D ARG A 358 UNP F5SYD3 LYS 358 ENGINEERED MUTATION SEQADV 8B2D GLU A 360 UNP F5SYD3 LEU 360 ENGINEERED MUTATION SEQADV 8B2D LYS A 363 UNP F5SYD3 VAL 363 ENGINEERED MUTATION SEQADV 8B2D ASP A 365 UNP F5SYD3 ALA 365 ENGINEERED MUTATION SEQADV 8B2D ASP A 370 UNP F5SYD3 THR 370 ENGINEERED MUTATION SEQADV 8B2D PHE A 371 UNP F5SYD3 TYR 371 ENGINEERED MUTATION SEQADV 8B2D ASP A 378 UNP F5SYD3 ASN 378 ENGINEERED MUTATION SEQADV 8B2D VAL A 393 UNP F5SYD3 THR 393 ENGINEERED MUTATION SEQADV 8B2D LYS A 398 UNP F5SYD3 LEU 398 ENGINEERED MUTATION SEQADV 8B2D PHE A 443 UNP F5SYD3 TYR 443 ENGINEERED MUTATION SEQADV 8B2D LEU A 457 UNP F5SYD3 EXPRESSION TAG SEQADV 8B2D GLU A 458 UNP F5SYD3 EXPRESSION TAG SEQADV 8B2D HIS A 459 UNP F5SYD3 EXPRESSION TAG SEQADV 8B2D HIS A 460 UNP F5SYD3 EXPRESSION TAG SEQADV 8B2D HIS A 461 UNP F5SYD3 EXPRESSION TAG SEQADV 8B2D HIS A 462 UNP F5SYD3 EXPRESSION TAG SEQADV 8B2D HIS A 463 UNP F5SYD3 EXPRESSION TAG SEQADV 8B2D HIS A 464 UNP F5SYD3 EXPRESSION TAG SEQADV 8B2D PRO B 95 UNP F5SYD3 ALA 95 ENGINEERED MUTATION SEQADV 8B2D THR B 135 UNP F5SYD3 SER 135 ENGINEERED MUTATION SEQADV 8B2D GLY B 197 UNP F5SYD3 ASP 197 ENGINEERED MUTATION SEQADV 8B2D VAL B 224 UNP F5SYD3 LEU 224 ENGINEERED MUTATION SEQADV 8B2D ASP B 236 UNP F5SYD3 LYS 236 ENGINEERED MUTATION SEQADV 8B2D GLY B 252 UNP F5SYD3 THR 252 ENGINEERED MUTATION SEQADV 8B2D ASP B 290 UNP F5SYD3 ASN 290 ENGINEERED MUTATION SEQADV 8B2D PRO B 296 UNP F5SYD3 LEU 296 ENGINEERED MUTATION SEQADV 8B2D ILE B 340 UNP F5SYD3 LEU 340 ENGINEERED MUTATION SEQADV 8B2D GLN B 353 UNP F5SYD3 MET 353 ENGINEERED MUTATION SEQADV 8B2D ARG B 358 UNP F5SYD3 LYS 358 ENGINEERED MUTATION SEQADV 8B2D GLU B 360 UNP F5SYD3 LEU 360 ENGINEERED MUTATION SEQADV 8B2D LYS B 363 UNP F5SYD3 VAL 363 ENGINEERED MUTATION SEQADV 8B2D ASP B 365 UNP F5SYD3 ALA 365 ENGINEERED MUTATION SEQADV 8B2D ASP B 370 UNP F5SYD3 THR 370 ENGINEERED MUTATION SEQADV 8B2D PHE B 371 UNP F5SYD3 TYR 371 ENGINEERED MUTATION SEQADV 8B2D ASP B 378 UNP F5SYD3 ASN 378 ENGINEERED MUTATION SEQADV 8B2D VAL B 393 UNP F5SYD3 THR 393 ENGINEERED MUTATION SEQADV 8B2D LYS B 398 UNP F5SYD3 LEU 398 ENGINEERED MUTATION SEQADV 8B2D PHE B 443 UNP F5SYD3 TYR 443 ENGINEERED MUTATION SEQADV 8B2D LEU B 457 UNP F5SYD3 EXPRESSION TAG SEQADV 8B2D GLU B 458 UNP F5SYD3 EXPRESSION TAG SEQADV 8B2D HIS B 459 UNP F5SYD3 EXPRESSION TAG SEQADV 8B2D HIS B 460 UNP F5SYD3 EXPRESSION TAG SEQADV 8B2D HIS B 461 UNP F5SYD3 EXPRESSION TAG SEQADV 8B2D HIS B 462 UNP F5SYD3 EXPRESSION TAG SEQADV 8B2D HIS B 463 UNP F5SYD3 EXPRESSION TAG SEQADV 8B2D HIS B 464 UNP F5SYD3 EXPRESSION TAG SEQRES 1 A 464 MET ALA THR ARG ILE ALA ILE LEU GLY ALA GLY PRO SER SEQRES 2 A 464 GLY MET ALA GLN LEU ARG ALA PHE GLN SER ALA GLN GLU SEQRES 3 A 464 LYS GLY ALA GLU ILE PRO GLU LEU VAL CYS PHE GLU LYS SEQRES 4 A 464 GLN ALA ASP TRP GLY GLY GLN TRP ASN TYR THR TRP ARG SEQRES 5 A 464 THR GLY LEU ASP GLU ASN GLY GLU PRO VAL HIS SER SER SEQRES 6 A 464 MET TYR ARG TYR LEU TRP SER ASN GLY PRO LYS GLU CYS SEQRES 7 A 464 LEU GLU PHE ALA ASP TYR THR PHE ASP GLU HIS PHE GLY SEQRES 8 A 464 LYS PRO ILE PRO SER TYR PRO PRO ARG GLU VAL LEU TRP SEQRES 9 A 464 ASP TYR ILE LYS GLY ARG VAL GLU LYS ALA GLY VAL ARG SEQRES 10 A 464 LYS TYR ILE ARG PHE ASN THR ALA VAL ARG HIS VAL GLU SEQRES 11 A 464 PHE ASN GLU ASP THR GLN THR PHE THR VAL THR VAL GLN SEQRES 12 A 464 ASP HIS THR THR ASP THR ILE TYR SER GLU GLU PHE ASP SEQRES 13 A 464 TYR VAL VAL CYS CYS THR GLY HIS PHE SER THR PRO TYR SEQRES 14 A 464 VAL PRO GLU PHE GLU GLY PHE GLU LYS PHE GLY GLY ARG SEQRES 15 A 464 ILE LEU HIS ALA HIS ASP PHE ARG ASP ALA LEU GLU PHE SEQRES 16 A 464 LYS GLY LYS THR VAL LEU LEU VAL GLY SER SER TYR SER SEQRES 17 A 464 ALA GLU ASP ILE GLY SER GLN CYS TYR LYS TYR GLY ALA SEQRES 18 A 464 LYS LYS VAL ILE SER CYS TYR ARG THR ALA PRO MET GLY SEQRES 19 A 464 TYR ASP TRP PRO GLU ASN TRP ASP GLU ARG PRO ASN LEU SEQRES 20 A 464 VAL ARG VAL ASP GLY GLU ASN ALA TYR PHE ALA ASP GLY SEQRES 21 A 464 SER SER GLU LYS VAL ASP ALA ILE ILE LEU CYS THR GLY SEQRES 22 A 464 TYR ILE HIS HIS PHE PRO PHE LEU ASN ASP ASP LEU ARG SEQRES 23 A 464 LEU VAL THR ASP ASN ARG LEU TRP PRO PRO ASN LEU TYR SEQRES 24 A 464 LYS GLY VAL VAL TRP GLU ASP ASN PRO LYS PHE PHE TYR SEQRES 25 A 464 ILE GLY MET GLN ASP GLN TRP TYR SER PHE ASN MET PHE SEQRES 26 A 464 ASP ALA GLN ALA TRP TYR ALA ARG ASP VAL ILE MET GLY SEQRES 27 A 464 ARG ILE PRO LEU PRO SER LYS GLU GLU MET LYS ALA ASP SEQRES 28 A 464 SER GLN ALA TRP ARG GLU ARG GLU GLU THR LEU LYS THR SEQRES 29 A 464 ASP GLU GLU MET TYR ASP PHE GLN GLY ASP TYR ILE GLN SEQRES 30 A 464 ASP LEU ILE ASP MET THR ASP TYR PRO SER PHE ASP ILE SEQRES 31 A 464 PRO ALA VAL ASN LYS THR PHE LYS GLU TRP LYS HIS HIS SEQRES 32 A 464 LYS LYS GLU ASN ILE MET THR PHE ARG ASP HIS SER TYR SEQRES 33 A 464 ARG SER LEU MET THR GLY THR MET ALA PRO LYS HIS HIS SEQRES 34 A 464 THR PRO TRP ILE ASP ALA LEU ASP ASP SER LEU GLU ALA SEQRES 35 A 464 PHE LEU SER ASP LYS SER GLU ILE PRO VAL ALA LYS GLU SEQRES 36 A 464 ALA LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 464 MET ALA THR ARG ILE ALA ILE LEU GLY ALA GLY PRO SER SEQRES 2 B 464 GLY MET ALA GLN LEU ARG ALA PHE GLN SER ALA GLN GLU SEQRES 3 B 464 LYS GLY ALA GLU ILE PRO GLU LEU VAL CYS PHE GLU LYS SEQRES 4 B 464 GLN ALA ASP TRP GLY GLY GLN TRP ASN TYR THR TRP ARG SEQRES 5 B 464 THR GLY LEU ASP GLU ASN GLY GLU PRO VAL HIS SER SER SEQRES 6 B 464 MET TYR ARG TYR LEU TRP SER ASN GLY PRO LYS GLU CYS SEQRES 7 B 464 LEU GLU PHE ALA ASP TYR THR PHE ASP GLU HIS PHE GLY SEQRES 8 B 464 LYS PRO ILE PRO SER TYR PRO PRO ARG GLU VAL LEU TRP SEQRES 9 B 464 ASP TYR ILE LYS GLY ARG VAL GLU LYS ALA GLY VAL ARG SEQRES 10 B 464 LYS TYR ILE ARG PHE ASN THR ALA VAL ARG HIS VAL GLU SEQRES 11 B 464 PHE ASN GLU ASP THR GLN THR PHE THR VAL THR VAL GLN SEQRES 12 B 464 ASP HIS THR THR ASP THR ILE TYR SER GLU GLU PHE ASP SEQRES 13 B 464 TYR VAL VAL CYS CYS THR GLY HIS PHE SER THR PRO TYR SEQRES 14 B 464 VAL PRO GLU PHE GLU GLY PHE GLU LYS PHE GLY GLY ARG SEQRES 15 B 464 ILE LEU HIS ALA HIS ASP PHE ARG ASP ALA LEU GLU PHE SEQRES 16 B 464 LYS GLY LYS THR VAL LEU LEU VAL GLY SER SER TYR SER SEQRES 17 B 464 ALA GLU ASP ILE GLY SER GLN CYS TYR LYS TYR GLY ALA SEQRES 18 B 464 LYS LYS VAL ILE SER CYS TYR ARG THR ALA PRO MET GLY SEQRES 19 B 464 TYR ASP TRP PRO GLU ASN TRP ASP GLU ARG PRO ASN LEU SEQRES 20 B 464 VAL ARG VAL ASP GLY GLU ASN ALA TYR PHE ALA ASP GLY SEQRES 21 B 464 SER SER GLU LYS VAL ASP ALA ILE ILE LEU CYS THR GLY SEQRES 22 B 464 TYR ILE HIS HIS PHE PRO PHE LEU ASN ASP ASP LEU ARG SEQRES 23 B 464 LEU VAL THR ASP ASN ARG LEU TRP PRO PRO ASN LEU TYR SEQRES 24 B 464 LYS GLY VAL VAL TRP GLU ASP ASN PRO LYS PHE PHE TYR SEQRES 25 B 464 ILE GLY MET GLN ASP GLN TRP TYR SER PHE ASN MET PHE SEQRES 26 B 464 ASP ALA GLN ALA TRP TYR ALA ARG ASP VAL ILE MET GLY SEQRES 27 B 464 ARG ILE PRO LEU PRO SER LYS GLU GLU MET LYS ALA ASP SEQRES 28 B 464 SER GLN ALA TRP ARG GLU ARG GLU GLU THR LEU LYS THR SEQRES 29 B 464 ASP GLU GLU MET TYR ASP PHE GLN GLY ASP TYR ILE GLN SEQRES 30 B 464 ASP LEU ILE ASP MET THR ASP TYR PRO SER PHE ASP ILE SEQRES 31 B 464 PRO ALA VAL ASN LYS THR PHE LYS GLU TRP LYS HIS HIS SEQRES 32 B 464 LYS LYS GLU ASN ILE MET THR PHE ARG ASP HIS SER TYR SEQRES 33 B 464 ARG SER LEU MET THR GLY THR MET ALA PRO LYS HIS HIS SEQRES 34 B 464 THR PRO TRP ILE ASP ALA LEU ASP ASP SER LEU GLU ALA SEQRES 35 B 464 PHE LEU SER ASP LYS SER GLU ILE PRO VAL ALA LYS GLU SEQRES 36 B 464 ALA LEU GLU HIS HIS HIS HIS HIS HIS HET SO4 A 501 5 HET GOL A 502 6 HET GOL A 503 6 HET FAD A 504 53 HET NAP A 505 48 HET GOL A 506 6 HET BTB B 501 14 HET GOL B 502 6 HET SO4 B 503 5 HET FAD B 504 53 HET NAP B 505 48 HET GOL B 506 6 HET GOL B 507 6 HET CL B 508 1 HET CL B 509 1 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM BTB 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL- HETNAM 2 BTB PROPANE-1,3-DIOL HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE HETSYN BTB BIS-TRIS BUFFER FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 GOL 6(C3 H8 O3) FORMUL 6 FAD 2(C27 H33 N9 O15 P2) FORMUL 7 NAP 2(C21 H28 N7 O17 P3) FORMUL 9 BTB C8 H19 N O5 FORMUL 16 CL 2(CL 1-) FORMUL 18 HOH *495(H2 O) HELIX 1 AA1 GLY A 11 LYS A 27 1 17 HELIX 2 AA2 GLY A 44 ASN A 48 5 5 HELIX 3 AA3 PRO A 75 LEU A 79 5 5 HELIX 4 AA4 THR A 85 GLY A 91 1 7 HELIX 5 AA5 PRO A 99 GLY A 115 1 17 HELIX 6 AA6 VAL A 116 LYS A 118 5 3 HELIX 7 AA7 GLY A 175 PHE A 179 5 5 HELIX 8 AA8 HIS A 187 PHE A 189 5 3 HELIX 9 AA9 ASP A 191 LYS A 196 5 6 HELIX 10 AB1 SER A 206 TYR A 219 1 14 HELIX 11 AB2 LYS A 300 VAL A 302 5 3 HELIX 12 AB3 SER A 321 MET A 337 1 17 HELIX 13 AB4 SER A 344 LEU A 362 1 19 HELIX 14 AB5 THR A 364 MET A 382 1 19 HELIX 15 AB6 ASP A 389 ASN A 407 1 19 HELIX 16 AB7 THR A 410 HIS A 414 5 5 HELIX 17 AB8 PRO A 431 ALA A 435 5 5 HELIX 18 AB9 SER A 439 SER A 445 1 7 HELIX 19 AC1 GLY B 11 LYS B 27 1 17 HELIX 20 AC2 GLY B 44 ASN B 48 5 5 HELIX 21 AC3 PRO B 75 LEU B 79 5 5 HELIX 22 AC4 THR B 85 GLY B 91 1 7 HELIX 23 AC5 PRO B 99 GLY B 115 1 17 HELIX 24 AC6 VAL B 116 LYS B 118 5 3 HELIX 25 AC7 GLY B 175 PHE B 179 5 5 HELIX 26 AC8 HIS B 187 PHE B 189 5 3 HELIX 27 AC9 ASP B 191 LYS B 196 5 6 HELIX 28 AD1 SER B 206 TYR B 219 1 14 HELIX 29 AD2 LYS B 300 VAL B 302 5 3 HELIX 30 AD3 SER B 321 MET B 337 1 17 HELIX 31 AD4 SER B 344 LEU B 362 1 19 HELIX 32 AD5 THR B 364 ASP B 381 1 18 HELIX 33 AD6 ASP B 389 ASN B 407 1 19 HELIX 34 AD7 THR B 410 HIS B 414 5 5 HELIX 35 AD8 PRO B 431 ALA B 435 5 5 HELIX 36 AD9 SER B 439 SER B 445 1 7 SHEET 1 AA1 5 ILE A 120 ARG A 121 0 SHEET 2 AA1 5 GLU A 33 PHE A 37 1 N CYS A 36 O ARG A 121 SHEET 3 AA1 5 ARG A 4 LEU A 8 1 N ILE A 7 O VAL A 35 SHEET 4 AA1 5 TYR A 157 CYS A 160 1 O VAL A 159 N ALA A 6 SHEET 5 AA1 5 PHE A 310 TYR A 312 1 O PHE A 311 N CYS A 160 SHEET 1 AA2 3 THR A 124 ASN A 132 0 SHEET 2 AA2 3 THR A 137 ASP A 144 -1 O THR A 137 N ASN A 132 SHEET 3 AA2 3 THR A 149 PHE A 155 -1 O THR A 149 N ASP A 144 SHEET 1 AA3 2 THR A 167 PRO A 168 0 SHEET 2 AA3 2 TYR A 274 ILE A 275 -1 O ILE A 275 N THR A 167 SHEET 1 AA4 5 ARG A 182 HIS A 185 0 SHEET 2 AA4 5 ALA A 267 LEU A 270 1 O LEU A 270 N LEU A 184 SHEET 3 AA4 5 THR A 199 VAL A 203 1 N LEU A 201 O ILE A 269 SHEET 4 AA4 5 LYS A 223 TYR A 228 1 O ILE A 225 N LEU A 202 SHEET 5 AA4 5 TRP A 241 PRO A 245 1 O ARG A 244 N SER A 226 SHEET 1 AA5 3 LEU A 247 VAL A 250 0 SHEET 2 AA5 3 ASN A 254 PHE A 257 -1 O TYR A 256 N VAL A 248 SHEET 3 AA5 3 SER A 262 LYS A 264 -1 O GLU A 263 N ALA A 255 SHEET 1 AA6 2 LEU A 298 TYR A 299 0 SHEET 2 AA6 2 VAL A 303 TRP A 304 -1 O VAL A 303 N TYR A 299 SHEET 1 AA7 5 ILE B 120 ARG B 121 0 SHEET 2 AA7 5 GLU B 33 PHE B 37 1 N CYS B 36 O ARG B 121 SHEET 3 AA7 5 ARG B 4 LEU B 8 1 N ILE B 7 O VAL B 35 SHEET 4 AA7 5 TYR B 157 CYS B 160 1 O VAL B 159 N LEU B 8 SHEET 5 AA7 5 PHE B 310 TYR B 312 1 O PHE B 311 N CYS B 160 SHEET 1 AA8 3 THR B 124 ASN B 132 0 SHEET 2 AA8 3 THR B 137 ASP B 144 -1 O THR B 141 N HIS B 128 SHEET 3 AA8 3 THR B 149 PHE B 155 -1 O PHE B 155 N PHE B 138 SHEET 1 AA9 2 THR B 167 PRO B 168 0 SHEET 2 AA9 2 TYR B 274 ILE B 275 -1 O ILE B 275 N THR B 167 SHEET 1 AB1 5 ARG B 182 HIS B 185 0 SHEET 2 AB1 5 ALA B 267 LEU B 270 1 O LEU B 270 N LEU B 184 SHEET 3 AB1 5 THR B 199 VAL B 203 1 N LEU B 201 O ILE B 269 SHEET 4 AB1 5 LYS B 223 TYR B 228 1 O ILE B 225 N LEU B 202 SHEET 5 AB1 5 TRP B 241 PRO B 245 1 O ARG B 244 N SER B 226 SHEET 1 AB2 3 LEU B 247 VAL B 250 0 SHEET 2 AB2 3 ASN B 254 PHE B 257 -1 O TYR B 256 N VAL B 248 SHEET 3 AB2 3 SER B 262 LYS B 264 -1 O GLU B 263 N ALA B 255 SHEET 1 AB3 2 LEU B 298 TYR B 299 0 SHEET 2 AB3 2 VAL B 303 TRP B 304 -1 O VAL B 303 N TYR B 299 CRYST1 125.606 130.361 115.653 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007961 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007671 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008647 0.00000