data_8B4E # _entry.id 8B4E # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.375 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8B4E pdb_00008b4e 10.2210/pdb8b4e/pdb WWPDB D_1292124837 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8B4E _pdbx_database_status.recvd_initial_deposition_date 2022-09-20 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Canals, A.' 1 0000-0003-0429-9348 'Pieretti, S.' 2 ? 'Muriel, M.' 3 ? 'El Yaman, N.' 4 ? 'Fabrega-Ferrer, M.' 5 0000-0001-9471-0473 'Perez-Luque, R.' 6 ? 'Krukonis, E.S.' 7 0000-0002-4400-3612 'Coll, M.' 8 0000-0003-4471-8674 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 120 _citation.language ? _citation.page_first e2304378120 _citation.page_last e2304378120 _citation.title 'ToxR activates the Vibrio cholerae virulence genes by tethering DNA to the membrane through versatile binding to multiple sites.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.2304378120 _citation.pdbx_database_id_PubMed 37428913 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Canals, A.' 1 0000-0003-0429-9348 primary 'Pieretti, S.' 2 ? primary 'Muriel-Masanes, M.' 3 ? primary 'El Yaman, N.' 4 ? primary 'Plecha, S.C.' 5 ? primary 'Thomson, J.J.' 6 0000-0002-3267-2632 primary 'Fabrega-Ferrer, M.' 7 ? primary 'Perez-Luque, R.' 8 ? primary 'Krukonis, E.S.' 9 0000-0002-4400-3612 primary 'Coll, M.' 10 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8B4E _cell.details ? _cell.formula_units_Z ? _cell.length_a 83.669 _cell.length_a_esd ? _cell.length_b 162.366 _cell.length_b_esd ? _cell.length_c 86.628 _cell.length_c_esd ? _cell.volume 1176841.454 _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8B4E _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cholera toxin transcriptional activator' 12703.462 2 ? ? ? ? 2 polymer syn 'DNA (25-MER)' 7634.939 1 ? ? ? ? 3 polymer syn 'DNA (25-MER)' 7716.066 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MKFILAEKFTFDPLSNTLIDKEDSEEIIRLGSNESRILWLLAQRPNEVISRNDLHDFVWREQGFEVDDSSLTQAISTLRK MLKDSTKSPQYVKTVPKRGYQLIARVETV ; ;MKFILAEKFTFDPLSNTLIDKEDSEEIIRLGSNESRILWLLAQRPNEVISRNDLHDFVWREQGFEVDDSSLTQAISTLRK MLKDSTKSPQYVKTVPKRGYQLIARVETV ; A,B ? 2 polydeoxyribonucleotide no no ;(DC)(DT)(DT)(DT)(DA)(DT)(DG)(DT)(DT)(DT)(DT)(DT)(DC)(DT)(DT)(DA)(DT)(DG)(DT)(DA) (DA)(DT)(DA)(DC)(DG) ; CTTTATGTTTTTCTTATGTAATACG L ? 3 polydeoxyribonucleotide no no ;(DC)(DG)(DT)(DA)(DT)(DT)(DA)(DC)(DA)(DT)(DA)(DA)(DG)(DA)(DA)(DA)(DA)(DA)(DC)(DA) (DT)(DA)(DA)(DA)(DG) ; CGTATTACATAAGAAAAACATAAAG M ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 PHE n 1 4 ILE n 1 5 LEU n 1 6 ALA n 1 7 GLU n 1 8 LYS n 1 9 PHE n 1 10 THR n 1 11 PHE n 1 12 ASP n 1 13 PRO n 1 14 LEU n 1 15 SER n 1 16 ASN n 1 17 THR n 1 18 LEU n 1 19 ILE n 1 20 ASP n 1 21 LYS n 1 22 GLU n 1 23 ASP n 1 24 SER n 1 25 GLU n 1 26 GLU n 1 27 ILE n 1 28 ILE n 1 29 ARG n 1 30 LEU n 1 31 GLY n 1 32 SER n 1 33 ASN n 1 34 GLU n 1 35 SER n 1 36 ARG n 1 37 ILE n 1 38 LEU n 1 39 TRP n 1 40 LEU n 1 41 LEU n 1 42 ALA n 1 43 GLN n 1 44 ARG n 1 45 PRO n 1 46 ASN n 1 47 GLU n 1 48 VAL n 1 49 ILE n 1 50 SER n 1 51 ARG n 1 52 ASN n 1 53 ASP n 1 54 LEU n 1 55 HIS n 1 56 ASP n 1 57 PHE n 1 58 VAL n 1 59 TRP n 1 60 ARG n 1 61 GLU n 1 62 GLN n 1 63 GLY n 1 64 PHE n 1 65 GLU n 1 66 VAL n 1 67 ASP n 1 68 ASP n 1 69 SER n 1 70 SER n 1 71 LEU n 1 72 THR n 1 73 GLN n 1 74 ALA n 1 75 ILE n 1 76 SER n 1 77 THR n 1 78 LEU n 1 79 ARG n 1 80 LYS n 1 81 MET n 1 82 LEU n 1 83 LYS n 1 84 ASP n 1 85 SER n 1 86 THR n 1 87 LYS n 1 88 SER n 1 89 PRO n 1 90 GLN n 1 91 TYR n 1 92 VAL n 1 93 LYS n 1 94 THR n 1 95 VAL n 1 96 PRO n 1 97 LYS n 1 98 ARG n 1 99 GLY n 1 100 TYR n 1 101 GLN n 1 102 LEU n 1 103 ILE n 1 104 ALA n 1 105 ARG n 1 106 VAL n 1 107 GLU n 1 108 THR n 1 109 VAL n 2 1 DC n 2 2 DT n 2 3 DT n 2 4 DT n 2 5 DA n 2 6 DT n 2 7 DG n 2 8 DT n 2 9 DT n 2 10 DT n 2 11 DT n 2 12 DT n 2 13 DC n 2 14 DT n 2 15 DT n 2 16 DA n 2 17 DT n 2 18 DG n 2 19 DT n 2 20 DA n 2 21 DA n 2 22 DT n 2 23 DA n 2 24 DC n 2 25 DG n 3 1 DC n 3 2 DG n 3 3 DT n 3 4 DA n 3 5 DT n 3 6 DT n 3 7 DA n 3 8 DC n 3 9 DA n 3 10 DT n 3 11 DA n 3 12 DA n 3 13 DG n 3 14 DA n 3 15 DA n 3 16 DA n 3 17 DA n 3 18 DA n 3 19 DC n 3 20 DA n 3 21 DT n 3 22 DA n 3 23 DA n 3 24 DA n 3 25 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 109 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'toxR, VC_0984' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 39315 / El Tor Inaba N16961' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vibrio cholerae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 666 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 25 'Vibrio cholerae' ? 666 ? 3 1 sample 1 25 'Vibrio cholerae' ? 666 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP TOXR_VIBCH P15795 ? 1 ;KFILAEKFTFDPLSNTLIDKEDSEEIIRLGSNESRILWLLAQRPNEVISRNDLHDFVWREQGFEVDDSSLTQAISTLRKM LKDSTKSPQYVKTVPKRGYQLIARVETV ; 19 2 PDB 8B4E 8B4E ? 2 ? 1 3 PDB 8B4E 8B4E ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8B4E A 2 ? 109 ? P15795 19 ? 126 ? 7 114 2 1 8B4E B 2 ? 109 ? P15795 19 ? 126 ? 7 114 3 2 8B4E L 1 ? 25 ? 8B4E -69 ? -45 ? -69 -45 4 3 8B4E M 1 ? 25 ? 8B4E 45 ? 69 ? 45 69 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8B4E MET A 1 ? UNP P15795 ? ? 'initiating methionine' 6 1 2 8B4E MET B 1 ? UNP P15795 ? ? 'initiating methionine' 6 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8B4E _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.62 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 66.00 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '25% PEG 4000, 0.3 M ammonium sulfate' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-07-15 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALBA BEAMLINE XALOC' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline XALOC _diffrn_source.pdbx_synchrotron_site ALBA # _reflns.B_iso_Wilson_estimate 116.07 _reflns.entry_id 8B4E _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.25 _reflns.d_resolution_low 81.18 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 9545 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.17 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.0 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.02 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.067 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 3.25 _reflns_shell.d_res_low 3.36 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 889 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.533 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 111.73 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8B4E _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.25 _refine.ls_d_res_low 81.18 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 9545 _refine.ls_number_reflns_R_free 463 _refine.ls_number_reflns_R_work 9082 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.89 _refine.ls_percent_reflns_R_free 4.85 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2273 _refine.ls_R_factor_R_free 0.2564 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2257 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB in deposition' _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 33.8886 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.5785 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 3.25 _refine_hist.d_res_low 81.18 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2782 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1763 _refine_hist.pdbx_number_atoms_nucleic_acid 1019 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0124 ? 2935 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.4227 ? 4179 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0734 ? 474 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0169 ? 359 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 30.4091 ? 725 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 3.25 3.72 . . 148 2968 98.95 . . . . 0.3377 . . . . . . . . . . . 0.3903 'X-RAY DIFFRACTION' 3.72 4.68 . . 150 3016 99.34 . . . . 0.2543 . . . . . . . . . . . 0.3163 'X-RAY DIFFRACTION' 4.68 81.18 . . 165 3098 98.46 . . . . 0.1855 . . . . . . . . . . . 0.2034 # _struct.entry_id 8B4E _struct.title 'ToxR bacterial transcriptional regulator bound to 25 bp toxT promoter DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8B4E _struct_keywords.text 'bacterial transcription, activation complex, DNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 13 ? SER A 15 ? PRO A 18 SER A 20 5 ? 3 HELX_P HELX_P2 AA2 GLY A 31 ? ARG A 44 ? GLY A 36 ARG A 49 1 ? 14 HELX_P HELX_P3 AA3 ARG A 51 ? TRP A 59 ? ARG A 56 TRP A 64 1 ? 9 HELX_P HELX_P4 AA4 ARG A 60 ? GLY A 63 ? ARG A 65 GLY A 68 5 ? 4 HELX_P HELX_P5 AA5 ASP A 68 ? LYS A 83 ? ASP A 73 LYS A 88 1 ? 16 HELX_P HELX_P6 AA6 PRO B 13 ? SER B 15 ? PRO B 18 SER B 20 5 ? 3 HELX_P HELX_P7 AA7 GLY B 31 ? ARG B 44 ? GLY B 36 ARG B 49 1 ? 14 HELX_P HELX_P8 AA8 SER B 50 ? TRP B 59 ? SER B 55 TRP B 64 1 ? 10 HELX_P HELX_P9 AA9 ASP B 67 ? LYS B 83 ? ASP B 72 LYS B 88 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DC 1 N3 ? ? ? 1_555 D DG 25 N1 ? ? L DC -69 M DG 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DC 1 N4 ? ? ? 1_555 D DG 25 O6 ? ? L DC -69 M DG 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DC 1 O2 ? ? ? 1_555 D DG 25 N2 ? ? L DC -69 M DG 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DT 2 N3 ? ? ? 1_555 D DA 24 N1 ? ? L DT -68 M DA 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DT 2 O4 ? ? ? 1_555 D DA 24 N6 ? ? L DT -68 M DA 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 23 N1 ? ? L DT -67 M DA 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 23 N6 ? ? L DT -67 M DA 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DT 4 N3 ? ? ? 1_555 D DA 22 N1 ? ? L DT -66 M DA 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DT 4 O4 ? ? ? 1_555 D DA 22 N6 ? ? L DT -66 M DA 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 21 N3 ? ? L DA -65 M DT 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 21 O4 ? ? L DA -65 M DT 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 20 N1 ? ? L DT -64 M DA 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 20 N6 ? ? L DT -64 M DA 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DG 7 N1 ? ? ? 1_555 D DC 19 N3 ? ? L DG -63 M DC 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DG 7 N2 ? ? ? 1_555 D DC 19 O2 ? ? L DG -63 M DC 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DG 7 O6 ? ? ? 1_555 D DC 19 N4 ? ? L DG -63 M DC 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DT 8 N3 ? ? ? 1_555 D DA 18 N1 ? ? L DT -62 M DA 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DT 8 O4 ? ? ? 1_555 D DA 18 N6 ? ? L DT -62 M DA 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DT 9 N3 ? ? ? 1_555 D DA 17 N1 ? ? L DT -61 M DA 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DT 9 O4 ? ? ? 1_555 D DA 17 N6 ? ? L DT -61 M DA 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DT 10 N3 ? ? ? 1_555 D DA 16 N1 ? ? L DT -60 M DA 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DT 10 O4 ? ? ? 1_555 D DA 16 N6 ? ? L DT -60 M DA 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DT 11 N3 ? ? ? 1_555 D DA 15 N1 ? ? L DT -59 M DA 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DT 11 O4 ? ? ? 1_555 D DA 15 N6 ? ? L DT -59 M DA 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DT 12 N3 ? ? ? 1_555 D DA 14 N1 ? ? L DT -58 M DA 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DT 12 O4 ? ? ? 1_555 D DA 14 N6 ? ? L DT -58 M DA 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DC 13 N3 ? ? ? 1_555 D DG 13 N1 ? ? L DC -57 M DG 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DC 13 N4 ? ? ? 1_555 D DG 13 O6 ? ? L DC -57 M DG 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DC 13 O2 ? ? ? 1_555 D DG 13 N2 ? ? L DC -57 M DG 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DT 14 N3 ? ? ? 1_555 D DA 12 N1 ? ? L DT -56 M DA 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DT 14 O4 ? ? ? 1_555 D DA 12 N6 ? ? L DT -56 M DA 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DT 15 N3 ? ? ? 1_555 D DA 11 N1 ? ? L DT -55 M DA 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DT 15 O4 ? ? ? 1_555 D DA 11 N6 ? ? L DT -55 M DA 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DA 16 N1 ? ? ? 1_555 D DT 10 N3 ? ? L DA -54 M DT 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DA 16 N6 ? ? ? 1_555 D DT 10 O4 ? ? L DA -54 M DT 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DT 17 N3 ? ? ? 1_555 D DA 9 N1 ? ? L DT -53 M DA 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DT 17 O4 ? ? ? 1_555 D DA 9 N6 ? ? L DT -53 M DA 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DG 18 N1 ? ? ? 1_555 D DC 8 N3 ? ? L DG -52 M DC 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DG 18 N2 ? ? ? 1_555 D DC 8 O2 ? ? L DG -52 M DC 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DG 18 O6 ? ? ? 1_555 D DC 8 N4 ? ? L DG -52 M DC 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DT 19 N3 ? ? ? 1_555 D DA 7 N1 ? ? L DT -51 M DA 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DT 19 O4 ? ? ? 1_555 D DA 7 N6 ? ? L DT -51 M DA 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DA 20 N1 ? ? ? 1_555 D DT 6 N3 ? ? L DA -50 M DT 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DA 20 N6 ? ? ? 1_555 D DT 6 O4 ? ? L DA -50 M DT 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C DA 21 N1 ? ? ? 1_555 D DT 5 N3 ? ? L DA -49 M DT 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C DA 21 N6 ? ? ? 1_555 D DT 5 O4 ? ? L DA -49 M DT 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C DT 22 N3 ? ? ? 1_555 D DA 4 N1 ? ? L DT -48 M DA 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C DT 22 O4 ? ? ? 1_555 D DA 4 N6 ? ? L DT -48 M DA 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C DA 23 N1 ? ? ? 1_555 D DT 3 N3 ? ? L DA -47 M DT 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C DA 23 N6 ? ? ? 1_555 D DT 3 O4 ? ? L DA -47 M DT 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C DC 24 N3 ? ? ? 1_555 D DG 2 N1 ? ? L DC -46 M DG 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? C DC 24 N4 ? ? ? 1_555 D DG 2 O6 ? ? L DC -46 M DG 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? C DC 24 O2 ? ? ? 1_555 D DG 2 N2 ? ? L DC -46 M DG 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? C DG 25 N1 ? ? ? 1_555 D DC 1 N3 ? ? L DG -45 M DC 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? C DG 25 N2 ? ? ? 1_555 D DC 1 O2 ? ? L DG -45 M DC 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? C DG 25 O6 ? ? ? 1_555 D DC 1 N4 ? ? L DG -45 M DC 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LYS 87 A . ? LYS 92 A SER 88 A ? SER 93 A 1 -2.05 2 LYS 87 B . ? LYS 92 B SER 88 B ? SER 93 B 1 2.19 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 3 ? AA3 ? 5 ? AA4 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 28 ? ARG A 29 ? ILE A 33 ARG A 34 AA1 2 THR A 17 ? ASP A 20 ? THR A 22 ASP A 25 AA1 3 PHE A 9 ? ASP A 12 ? PHE A 14 ASP A 17 AA1 4 PHE A 3 ? LEU A 5 ? PHE A 8 LEU A 10 AA1 5 VAL A 106 ? GLU A 107 ? VAL A 111 GLU A 112 AA2 1 VAL A 48 ? SER A 50 ? VAL A 53 SER A 55 AA2 2 GLY A 99 ? LEU A 102 ? GLY A 104 LEU A 107 AA2 3 VAL A 92 ? VAL A 95 ? VAL A 97 VAL A 100 AA3 1 ASP B 23 ? ARG B 29 ? ASP B 28 ARG B 34 AA3 2 THR B 17 ? ASP B 20 ? THR B 22 ASP B 25 AA3 3 PHE B 9 ? ASP B 12 ? PHE B 14 ASP B 17 AA3 4 PHE B 3 ? LEU B 5 ? PHE B 8 LEU B 10 AA3 5 VAL B 106 ? THR B 108 ? VAL B 111 THR B 113 AA4 1 VAL B 48 ? ILE B 49 ? VAL B 53 ILE B 54 AA4 2 GLY B 99 ? LEU B 102 ? GLY B 104 LEU B 107 AA4 3 VAL B 92 ? VAL B 95 ? VAL B 97 VAL B 100 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ILE A 28 ? O ILE A 33 N LEU A 18 ? N LEU A 23 AA1 2 3 O ILE A 19 ? O ILE A 24 N THR A 10 ? N THR A 15 AA1 3 4 O PHE A 9 ? O PHE A 14 N LEU A 5 ? N LEU A 10 AA1 4 5 N ILE A 4 ? N ILE A 9 O GLU A 107 ? O GLU A 112 AA2 1 2 N ILE A 49 ? N ILE A 54 O TYR A 100 ? O TYR A 105 AA2 2 3 N GLY A 99 ? N GLY A 104 O VAL A 95 ? O VAL A 100 AA3 1 2 O ILE B 28 ? O ILE B 33 N LEU B 18 ? N LEU B 23 AA3 2 3 O ILE B 19 ? O ILE B 24 N THR B 10 ? N THR B 15 AA3 3 4 O PHE B 11 ? O PHE B 16 N PHE B 3 ? N PHE B 8 AA3 4 5 N ILE B 4 ? N ILE B 9 O GLU B 107 ? O GLU B 112 AA4 1 2 N ILE B 49 ? N ILE B 54 O TYR B 100 ? O TYR B 105 AA4 2 3 O GLY B 99 ? O GLY B 104 N VAL B 95 ? N VAL B 100 # _atom_sites.entry_id 8B4E _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.011952 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006159 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011544 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 6 ? ? ? A . n A 1 2 LYS 2 7 7 LYS LYS A . n A 1 3 PHE 3 8 8 PHE PHE A . n A 1 4 ILE 4 9 9 ILE ILE A . n A 1 5 LEU 5 10 10 LEU LEU A . n A 1 6 ALA 6 11 11 ALA ALA A . n A 1 7 GLU 7 12 12 GLU GLU A . n A 1 8 LYS 8 13 13 LYS LYS A . n A 1 9 PHE 9 14 14 PHE PHE A . n A 1 10 THR 10 15 15 THR THR A . n A 1 11 PHE 11 16 16 PHE PHE A . n A 1 12 ASP 12 17 17 ASP ASP A . n A 1 13 PRO 13 18 18 PRO PRO A . n A 1 14 LEU 14 19 19 LEU LEU A . n A 1 15 SER 15 20 20 SER SER A . n A 1 16 ASN 16 21 21 ASN ASN A . n A 1 17 THR 17 22 22 THR THR A . n A 1 18 LEU 18 23 23 LEU LEU A . n A 1 19 ILE 19 24 24 ILE ILE A . n A 1 20 ASP 20 25 25 ASP ASP A . n A 1 21 LYS 21 26 26 LYS LYS A . n A 1 22 GLU 22 27 27 GLU GLU A . n A 1 23 ASP 23 28 28 ASP ASP A . n A 1 24 SER 24 29 29 SER SER A . n A 1 25 GLU 25 30 30 GLU GLU A . n A 1 26 GLU 26 31 31 GLU GLU A . n A 1 27 ILE 27 32 32 ILE ILE A . n A 1 28 ILE 28 33 33 ILE ILE A . n A 1 29 ARG 29 34 34 ARG ARG A . n A 1 30 LEU 30 35 35 LEU LEU A . n A 1 31 GLY 31 36 36 GLY GLY A . n A 1 32 SER 32 37 37 SER SER A . n A 1 33 ASN 33 38 38 ASN ASN A . n A 1 34 GLU 34 39 39 GLU GLU A . n A 1 35 SER 35 40 40 SER SER A . n A 1 36 ARG 36 41 41 ARG ARG A . n A 1 37 ILE 37 42 42 ILE ILE A . n A 1 38 LEU 38 43 43 LEU LEU A . n A 1 39 TRP 39 44 44 TRP TRP A . n A 1 40 LEU 40 45 45 LEU LEU A . n A 1 41 LEU 41 46 46 LEU LEU A . n A 1 42 ALA 42 47 47 ALA ALA A . n A 1 43 GLN 43 48 48 GLN GLN A . n A 1 44 ARG 44 49 49 ARG ARG A . n A 1 45 PRO 45 50 50 PRO PRO A . n A 1 46 ASN 46 51 51 ASN ASN A . n A 1 47 GLU 47 52 52 GLU GLU A . n A 1 48 VAL 48 53 53 VAL VAL A . n A 1 49 ILE 49 54 54 ILE ILE A . n A 1 50 SER 50 55 55 SER SER A . n A 1 51 ARG 51 56 56 ARG ARG A . n A 1 52 ASN 52 57 57 ASN ASN A . n A 1 53 ASP 53 58 58 ASP ASP A . n A 1 54 LEU 54 59 59 LEU LEU A . n A 1 55 HIS 55 60 60 HIS HIS A . n A 1 56 ASP 56 61 61 ASP ASP A . n A 1 57 PHE 57 62 62 PHE PHE A . n A 1 58 VAL 58 63 63 VAL VAL A . n A 1 59 TRP 59 64 64 TRP TRP A . n A 1 60 ARG 60 65 65 ARG ARG A . n A 1 61 GLU 61 66 66 GLU GLU A . n A 1 62 GLN 62 67 67 GLN GLN A . n A 1 63 GLY 63 68 68 GLY GLY A . n A 1 64 PHE 64 69 69 PHE PHE A . n A 1 65 GLU 65 70 70 GLU GLU A . n A 1 66 VAL 66 71 71 VAL VAL A . n A 1 67 ASP 67 72 72 ASP ASP A . n A 1 68 ASP 68 73 73 ASP ASP A . n A 1 69 SER 69 74 74 SER SER A . n A 1 70 SER 70 75 75 SER SER A . n A 1 71 LEU 71 76 76 LEU LEU A . n A 1 72 THR 72 77 77 THR THR A . n A 1 73 GLN 73 78 78 GLN GLN A . n A 1 74 ALA 74 79 79 ALA ALA A . n A 1 75 ILE 75 80 80 ILE ILE A . n A 1 76 SER 76 81 81 SER SER A . n A 1 77 THR 77 82 82 THR THR A . n A 1 78 LEU 78 83 83 LEU LEU A . n A 1 79 ARG 79 84 84 ARG ARG A . n A 1 80 LYS 80 85 85 LYS LYS A . n A 1 81 MET 81 86 86 MET MET A . n A 1 82 LEU 82 87 87 LEU LEU A . n A 1 83 LYS 83 88 88 LYS LYS A . n A 1 84 ASP 84 89 89 ASP ASP A . n A 1 85 SER 85 90 90 SER SER A . n A 1 86 THR 86 91 91 THR THR A . n A 1 87 LYS 87 92 92 LYS LYS A . n A 1 88 SER 88 93 93 SER SER A . n A 1 89 PRO 89 94 94 PRO PRO A . n A 1 90 GLN 90 95 95 GLN GLN A . n A 1 91 TYR 91 96 96 TYR TYR A . n A 1 92 VAL 92 97 97 VAL VAL A . n A 1 93 LYS 93 98 98 LYS LYS A . n A 1 94 THR 94 99 99 THR THR A . n A 1 95 VAL 95 100 100 VAL VAL A . n A 1 96 PRO 96 101 101 PRO PRO A . n A 1 97 LYS 97 102 102 LYS LYS A . n A 1 98 ARG 98 103 103 ARG ARG A . n A 1 99 GLY 99 104 104 GLY GLY A . n A 1 100 TYR 100 105 105 TYR TYR A . n A 1 101 GLN 101 106 106 GLN GLN A . n A 1 102 LEU 102 107 107 LEU LEU A . n A 1 103 ILE 103 108 108 ILE ILE A . n A 1 104 ALA 104 109 109 ALA ALA A . n A 1 105 ARG 105 110 110 ARG ARG A . n A 1 106 VAL 106 111 111 VAL VAL A . n A 1 107 GLU 107 112 112 GLU GLU A . n A 1 108 THR 108 113 113 THR THR A . n A 1 109 VAL 109 114 ? ? ? A . n B 1 1 MET 1 6 ? ? ? B . n B 1 2 LYS 2 7 7 LYS LYS B . n B 1 3 PHE 3 8 8 PHE PHE B . n B 1 4 ILE 4 9 9 ILE ILE B . n B 1 5 LEU 5 10 10 LEU LEU B . n B 1 6 ALA 6 11 11 ALA ALA B . n B 1 7 GLU 7 12 12 GLU GLU B . n B 1 8 LYS 8 13 13 LYS LYS B . n B 1 9 PHE 9 14 14 PHE PHE B . n B 1 10 THR 10 15 15 THR THR B . n B 1 11 PHE 11 16 16 PHE PHE B . n B 1 12 ASP 12 17 17 ASP ASP B . n B 1 13 PRO 13 18 18 PRO PRO B . n B 1 14 LEU 14 19 19 LEU LEU B . n B 1 15 SER 15 20 20 SER SER B . n B 1 16 ASN 16 21 21 ASN ASN B . n B 1 17 THR 17 22 22 THR THR B . n B 1 18 LEU 18 23 23 LEU LEU B . n B 1 19 ILE 19 24 24 ILE ILE B . n B 1 20 ASP 20 25 25 ASP ASP B . n B 1 21 LYS 21 26 26 LYS LYS B . n B 1 22 GLU 22 27 27 GLU GLU B . n B 1 23 ASP 23 28 28 ASP ASP B . n B 1 24 SER 24 29 29 SER SER B . n B 1 25 GLU 25 30 30 GLU GLU B . n B 1 26 GLU 26 31 31 GLU GLU B . n B 1 27 ILE 27 32 32 ILE ILE B . n B 1 28 ILE 28 33 33 ILE ILE B . n B 1 29 ARG 29 34 34 ARG ARG B . n B 1 30 LEU 30 35 35 LEU LEU B . n B 1 31 GLY 31 36 36 GLY GLY B . n B 1 32 SER 32 37 37 SER SER B . n B 1 33 ASN 33 38 38 ASN ASN B . n B 1 34 GLU 34 39 39 GLU GLU B . n B 1 35 SER 35 40 40 SER SER B . n B 1 36 ARG 36 41 41 ARG ARG B . n B 1 37 ILE 37 42 42 ILE ILE B . n B 1 38 LEU 38 43 43 LEU LEU B . n B 1 39 TRP 39 44 44 TRP TRP B . n B 1 40 LEU 40 45 45 LEU LEU B . n B 1 41 LEU 41 46 46 LEU LEU B . n B 1 42 ALA 42 47 47 ALA ALA B . n B 1 43 GLN 43 48 48 GLN GLN B . n B 1 44 ARG 44 49 49 ARG ARG B . n B 1 45 PRO 45 50 50 PRO PRO B . n B 1 46 ASN 46 51 51 ASN ASN B . n B 1 47 GLU 47 52 52 GLU GLU B . n B 1 48 VAL 48 53 53 VAL VAL B . n B 1 49 ILE 49 54 54 ILE ILE B . n B 1 50 SER 50 55 55 SER SER B . n B 1 51 ARG 51 56 56 ARG ARG B . n B 1 52 ASN 52 57 57 ASN ASN B . n B 1 53 ASP 53 58 58 ASP ASP B . n B 1 54 LEU 54 59 59 LEU LEU B . n B 1 55 HIS 55 60 60 HIS HIS B . n B 1 56 ASP 56 61 61 ASP ASP B . n B 1 57 PHE 57 62 62 PHE PHE B . n B 1 58 VAL 58 63 63 VAL VAL B . n B 1 59 TRP 59 64 64 TRP TRP B . n B 1 60 ARG 60 65 65 ARG ARG B . n B 1 61 GLU 61 66 66 GLU GLU B . n B 1 62 GLN 62 67 67 GLN GLN B . n B 1 63 GLY 63 68 68 GLY GLY B . n B 1 64 PHE 64 69 69 PHE PHE B . n B 1 65 GLU 65 70 70 GLU GLU B . n B 1 66 VAL 66 71 71 VAL VAL B . n B 1 67 ASP 67 72 72 ASP ASP B . n B 1 68 ASP 68 73 73 ASP ASP B . n B 1 69 SER 69 74 74 SER SER B . n B 1 70 SER 70 75 75 SER SER B . n B 1 71 LEU 71 76 76 LEU LEU B . n B 1 72 THR 72 77 77 THR THR B . n B 1 73 GLN 73 78 78 GLN GLN B . n B 1 74 ALA 74 79 79 ALA ALA B . n B 1 75 ILE 75 80 80 ILE ILE B . n B 1 76 SER 76 81 81 SER SER B . n B 1 77 THR 77 82 82 THR THR B . n B 1 78 LEU 78 83 83 LEU LEU B . n B 1 79 ARG 79 84 84 ARG ARG B . n B 1 80 LYS 80 85 85 LYS LYS B . n B 1 81 MET 81 86 86 MET MET B . n B 1 82 LEU 82 87 87 LEU LEU B . n B 1 83 LYS 83 88 88 LYS LYS B . n B 1 84 ASP 84 89 89 ASP ASP B . n B 1 85 SER 85 90 90 SER SER B . n B 1 86 THR 86 91 91 THR THR B . n B 1 87 LYS 87 92 92 LYS LYS B . n B 1 88 SER 88 93 93 SER SER B . n B 1 89 PRO 89 94 94 PRO PRO B . n B 1 90 GLN 90 95 95 GLN GLN B . n B 1 91 TYR 91 96 96 TYR TYR B . n B 1 92 VAL 92 97 97 VAL VAL B . n B 1 93 LYS 93 98 98 LYS LYS B . n B 1 94 THR 94 99 99 THR THR B . n B 1 95 VAL 95 100 100 VAL VAL B . n B 1 96 PRO 96 101 101 PRO PRO B . n B 1 97 LYS 97 102 102 LYS LYS B . n B 1 98 ARG 98 103 103 ARG ARG B . n B 1 99 GLY 99 104 104 GLY GLY B . n B 1 100 TYR 100 105 105 TYR TYR B . n B 1 101 GLN 101 106 106 GLN GLN B . n B 1 102 LEU 102 107 107 LEU LEU B . n B 1 103 ILE 103 108 108 ILE ILE B . n B 1 104 ALA 104 109 109 ALA ALA B . n B 1 105 ARG 105 110 110 ARG ARG B . n B 1 106 VAL 106 111 111 VAL VAL B . n B 1 107 GLU 107 112 112 GLU GLU B . n B 1 108 THR 108 113 113 THR THR B . n B 1 109 VAL 109 114 114 VAL VAL B . n C 2 1 DC 1 -69 -69 DC DC L . n C 2 2 DT 2 -68 -68 DT DT L . n C 2 3 DT 3 -67 -67 DT DT L . n C 2 4 DT 4 -66 -66 DT DT L . n C 2 5 DA 5 -65 -65 DA DA L . n C 2 6 DT 6 -64 -64 DT DT L . n C 2 7 DG 7 -63 -63 DG DG L . n C 2 8 DT 8 -62 -62 DT DT L . n C 2 9 DT 9 -61 -61 DT DT L . n C 2 10 DT 10 -60 -60 DT DT L . n C 2 11 DT 11 -59 -59 DT DT L . n C 2 12 DT 12 -58 -58 DT DT L . n C 2 13 DC 13 -57 -57 DC DC L . n C 2 14 DT 14 -56 -56 DT DT L . n C 2 15 DT 15 -55 -55 DT DT L . n C 2 16 DA 16 -54 -54 DA DA L . n C 2 17 DT 17 -53 -53 DT DT L . n C 2 18 DG 18 -52 -52 DG DG L . n C 2 19 DT 19 -51 -51 DT DT L . n C 2 20 DA 20 -50 -50 DA DA L . n C 2 21 DA 21 -49 -49 DA DA L . n C 2 22 DT 22 -48 -48 DT DT L . n C 2 23 DA 23 -47 -47 DA DA L . n C 2 24 DC 24 -46 -46 DC DC L . n C 2 25 DG 25 -45 -45 DG DG L . n D 3 1 DC 1 45 45 DC DC M . n D 3 2 DG 2 46 46 DG DG M . n D 3 3 DT 3 47 47 DT DT M . n D 3 4 DA 4 48 48 DA DA M . n D 3 5 DT 5 49 49 DT DT M . n D 3 6 DT 6 50 50 DT DT M . n D 3 7 DA 7 51 51 DA DA M . n D 3 8 DC 8 52 52 DC DC M . n D 3 9 DA 9 53 53 DA DA M . n D 3 10 DT 10 54 54 DT DT M . n D 3 11 DA 11 55 55 DA DA M . n D 3 12 DA 12 56 56 DA DA M . n D 3 13 DG 13 57 57 DG DG M . n D 3 14 DA 14 58 58 DA DA M . n D 3 15 DA 15 59 59 DA DA M . n D 3 16 DA 16 60 60 DA DA M . n D 3 17 DA 17 61 61 DA DA M . n D 3 18 DA 18 62 62 DA DA M . n D 3 19 DC 19 63 63 DC DC M . n D 3 20 DA 20 64 64 DA DA M . n D 3 21 DT 21 65 65 DT DT M . n D 3 22 DA 22 66 66 DA DA M . n D 3 23 DA 23 67 67 DA DA M . n D 3 24 DA 24 68 68 DA DA M . n D 3 25 DG 25 69 69 DG DG M . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email miquel.coll@irbbarcelona.org _pdbx_contact_author.name_first Miquel _pdbx_contact_author.name_last Coll _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4471-8674 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5600 ? 1 MORE -28 ? 1 'SSA (A^2)' 18990 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2023-08-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20rc4_4425 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OG1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 THR _pdbx_validate_close_contact.auth_seq_id_1 99 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OP1 _pdbx_validate_close_contact.auth_asym_id_2 L _pdbx_validate_close_contact.auth_comp_id_2 DG _pdbx_validate_close_contact.auth_seq_id_2 -52 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.06 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 "O5'" _pdbx_validate_symm_contact.auth_asym_id_1 M _pdbx_validate_symm_contact.auth_comp_id_1 DC _pdbx_validate_symm_contact.auth_seq_id_1 45 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 "O3'" _pdbx_validate_symm_contact.auth_asym_id_2 M _pdbx_validate_symm_contact.auth_comp_id_2 DG _pdbx_validate_symm_contact.auth_seq_id_2 69 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 7_454 _pdbx_validate_symm_contact.dist 2.08 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" L DT -68 ? ? "C3'" L DT -68 ? ? 1.329 1.419 -0.090 0.006 N 2 1 "O3'" L DA -54 ? ? "C3'" L DA -54 ? ? 1.368 1.419 -0.051 0.006 N 3 1 "O3'" L DT -51 ? ? "C3'" L DT -51 ? ? 1.383 1.419 -0.036 0.006 N 4 1 "O3'" M DA 48 ? ? "C3'" M DA 48 ? ? 1.372 1.419 -0.047 0.006 N 5 1 N9 M DA 48 ? ? C4 M DA 48 ? ? 1.415 1.374 0.041 0.006 N 6 1 "O3'" M DA 62 ? ? "C3'" M DA 62 ? ? 1.380 1.419 -0.039 0.006 N 7 1 "O3'" M DA 64 ? ? "C3'" M DA 64 ? ? 1.380 1.419 -0.039 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA B ARG 41 ? ? CB B ARG 41 ? ? CG B ARG 41 ? ? 99.73 113.40 -13.67 2.20 N 2 1 NE B ARG 41 ? ? CZ B ARG 41 ? ? NH1 B ARG 41 ? ? 123.38 120.30 3.08 0.50 N 3 1 OE1 B GLU 66 ? ? CD B GLU 66 ? ? OE2 B GLU 66 ? ? 114.65 123.30 -8.65 1.20 N 4 1 "O4'" L DG -45 ? ? "C1'" L DG -45 ? ? N9 L DG -45 ? ? 110.15 108.30 1.85 0.30 N 5 1 "O4'" M DA 67 ? ? "C1'" M DA 67 ? ? N9 M DA 67 ? ? 111.03 108.30 2.73 0.30 N 6 1 "O4'" M DG 69 ? ? "C1'" M DG 69 ? ? N9 M DG 69 ? ? 110.87 108.30 2.57 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 12 ? ? 53.05 8.92 2 1 LEU A 19 ? ? -62.11 4.41 3 1 GLN A 48 ? ? -38.68 -33.57 4 1 TRP A 64 ? ? -117.19 -89.89 5 1 ARG A 65 ? ? -66.32 5.15 6 1 GLN A 67 ? ? -94.39 33.99 7 1 GLU B 12 ? ? 47.35 23.77 8 1 LYS B 13 ? ? -121.60 -67.34 9 1 ASN B 51 ? ? 72.34 -10.81 10 1 TRP B 64 ? ? -140.34 -156.45 11 1 ARG B 65 ? ? 65.28 -47.62 12 1 GLN B 67 ? ? -93.35 39.82 13 1 GLU B 70 ? ? -106.97 62.97 14 1 TYR B 96 ? ? -130.81 -48.38 15 1 PRO B 101 ? ? -37.31 126.30 16 1 LYS B 102 ? ? 63.96 -4.22 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 TRP A 64 ? ? ARG A 65 ? ? -147.78 2 1 GLY B 68 ? ? PHE B 69 ? ? -138.83 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id B _pdbx_validate_planes.auth_seq_id 41 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.143 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 6 ? A MET 1 2 1 Y 1 A VAL 114 ? A VAL 109 3 1 Y 1 B MET 6 ? B MET 1 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8B4E 'double helix' 8B4E 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DC 1 1_555 D DG 25 1_555 -0.175 0.125 0.459 -11.308 -9.323 8.744 1 L_DC-69:DG69_M L -69 ? M 69 ? 19 1 1 C DT 2 1_555 D DA 24 1_555 -0.478 -0.118 0.407 -8.645 -16.036 -5.526 2 L_DT-68:DA68_M L -68 ? M 68 ? 20 1 1 C DT 3 1_555 D DA 23 1_555 -0.147 0.065 -0.248 -2.201 -15.539 6.743 3 L_DT-67:DA67_M L -67 ? M 67 ? 20 1 1 C DT 4 1_555 D DA 22 1_555 -0.129 -0.058 0.054 -3.215 -18.850 -4.424 4 L_DT-66:DA66_M L -66 ? M 66 ? 20 1 1 C DA 5 1_555 D DT 21 1_555 0.067 -0.019 -0.088 -14.543 -9.926 1.436 5 L_DA-65:DT65_M L -65 ? M 65 ? 20 1 1 C DT 6 1_555 D DA 20 1_555 0.130 0.045 -0.221 2.160 -1.943 -2.513 6 L_DT-64:DA64_M L -64 ? M 64 ? 20 1 1 C DG 7 1_555 D DC 19 1_555 -0.134 -0.173 0.548 3.347 -3.716 -2.406 7 L_DG-63:DC63_M L -63 ? M 63 ? 19 1 1 C DT 8 1_555 D DA 18 1_555 0.129 -0.074 0.361 -0.907 -7.040 1.799 8 L_DT-62:DA62_M L -62 ? M 62 ? 20 1 1 C DT 9 1_555 D DA 17 1_555 -0.223 -0.218 0.057 -2.051 -15.020 -3.465 9 L_DT-61:DA61_M L -61 ? M 61 ? 20 1 1 C DT 10 1_555 D DA 16 1_555 -0.221 -0.023 -0.080 -2.192 -15.381 2.758 10 L_DT-60:DA60_M L -60 ? M 60 ? 20 1 1 C DT 11 1_555 D DA 15 1_555 -0.011 -0.221 -0.313 2.586 -17.881 2.528 11 L_DT-59:DA59_M L -59 ? M 59 ? 20 1 1 C DT 12 1_555 D DA 14 1_555 -0.199 -0.286 -0.126 3.962 -21.045 -2.661 12 L_DT-58:DA58_M L -58 ? M 58 ? 20 1 1 C DC 13 1_555 D DG 13 1_555 0.228 -0.200 0.367 2.604 -18.856 3.534 13 L_DC-57:DG57_M L -57 ? M 57 ? 19 1 1 C DT 14 1_555 D DA 12 1_555 -0.099 -0.183 -0.045 2.273 -10.774 2.997 14 L_DT-56:DA56_M L -56 ? M 56 ? 20 1 1 C DT 15 1_555 D DA 11 1_555 -0.179 -0.134 0.149 -1.861 -9.750 -0.345 15 L_DT-55:DA55_M L -55 ? M 55 ? 20 1 1 C DA 16 1_555 D DT 10 1_555 0.316 -0.019 0.585 -1.491 -6.603 5.321 16 L_DA-54:DT54_M L -54 ? M 54 ? 20 1 1 C DT 17 1_555 D DA 9 1_555 0.142 -0.216 0.229 -2.047 -10.154 1.541 17 L_DT-53:DA53_M L -53 ? M 53 ? 20 1 1 C DG 18 1_555 D DC 8 1_555 -0.222 -0.197 -0.537 -10.211 -3.522 2.007 18 L_DG-52:DC52_M L -52 ? M 52 ? 19 1 1 C DT 19 1_555 D DA 7 1_555 -0.127 -0.448 0.806 -0.420 -8.538 -3.828 19 L_DT-51:DA51_M L -51 ? M 51 ? 20 1 1 C DA 20 1_555 D DT 6 1_555 -0.161 -0.105 -0.070 4.454 -23.143 2.470 20 L_DA-50:DT50_M L -50 ? M 50 ? 20 1 1 C DA 21 1_555 D DT 5 1_555 -0.131 0.085 -0.433 -8.203 -17.976 1.765 21 L_DA-49:DT49_M L -49 ? M 49 ? 20 1 1 C DT 22 1_555 D DA 4 1_555 0.286 0.079 -0.148 1.509 -15.085 -0.530 22 L_DT-48:DA48_M L -48 ? M 48 ? 20 1 1 C DA 23 1_555 D DT 3 1_555 0.564 -0.141 0.798 3.054 -7.776 3.286 23 L_DA-47:DT47_M L -47 ? M 47 ? 20 1 1 C DC 24 1_555 D DG 2 1_555 0.386 -0.111 0.332 0.316 -10.277 5.352 24 L_DC-46:DG46_M L -46 ? M 46 ? 19 1 1 C DG 25 1_555 D DC 1 1_555 -0.274 0.153 0.285 -3.316 -12.276 11.162 25 L_DG-45:DC45_M L -45 ? M 45 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DC 1 1_555 D DG 25 1_555 C DT 2 1_555 D DA 24 1_555 -0.707 -0.429 3.242 -2.515 0.488 33.733 -0.815 0.809 3.278 0.840 4.327 33.828 1 LL_DC-69DT-68:DA68DG69_MM L -69 ? M 69 ? L -68 ? M 68 ? 1 C DT 2 1_555 D DA 24 1_555 C DT 3 1_555 D DA 23 1_555 0.836 -0.413 3.053 4.636 -1.783 35.123 -0.429 -0.725 3.151 -2.937 -7.635 35.461 2 LL_DT-68DT-67:DA67DA68_MM L -68 ? M 68 ? L -67 ? M 67 ? 1 C DT 3 1_555 D DA 23 1_555 C DT 4 1_555 D DA 22 1_555 -0.449 -0.609 3.314 -3.116 -0.183 36.491 -0.944 0.279 3.343 -0.292 4.965 36.620 3 LL_DT-67DT-66:DA66DA67_MM L -67 ? M 67 ? L -66 ? M 66 ? 1 C DT 4 1_555 D DA 22 1_555 C DA 5 1_555 D DT 21 1_555 0.415 0.209 3.392 1.163 4.356 40.396 -0.203 -0.462 3.406 6.284 -1.677 40.637 4 LL_DT-66DA-65:DT65DA66_MM L -66 ? M 66 ? L -65 ? M 65 ? 1 C DA 5 1_555 D DT 21 1_555 C DT 6 1_555 D DA 20 1_555 -0.430 -0.346 2.818 -1.513 -2.384 31.900 -0.254 0.542 2.853 -4.328 2.746 32.021 5 LL_DA-65DT-64:DA64DT65_MM L -65 ? M 65 ? L -64 ? M 64 ? 1 C DT 6 1_555 D DA 20 1_555 C DG 7 1_555 D DC 19 1_555 0.438 -1.350 3.003 -4.293 -0.270 35.729 -2.151 -1.266 2.942 -0.438 6.966 35.979 6 LL_DT-64DG-63:DC63DA64_MM L -64 ? M 64 ? L -63 ? M 63 ? 1 C DG 7 1_555 D DC 19 1_555 C DT 8 1_555 D DA 18 1_555 -0.308 -1.024 3.427 1.543 0.508 33.541 -1.859 0.797 3.395 0.879 -2.672 33.579 7 LL_DG-63DT-62:DA62DC63_MM L -63 ? M 63 ? L -62 ? M 62 ? 1 C DT 8 1_555 D DA 18 1_555 C DT 9 1_555 D DA 17 1_555 -0.449 -0.866 3.315 0.551 -7.116 32.865 -0.287 0.870 3.415 -12.395 -0.960 33.610 8 LL_DT-62DT-61:DA61DA62_MM L -62 ? M 62 ? L -61 ? M 61 ? 1 C DT 9 1_555 D DA 17 1_555 C DT 10 1_555 D DA 16 1_555 0.049 -0.671 3.198 -0.803 -2.441 36.573 -0.737 -0.186 3.233 -3.884 1.277 36.660 9 LL_DT-61DT-60:DA60DA61_MM L -61 ? M 61 ? L -60 ? M 60 ? 1 C DT 10 1_555 D DA 16 1_555 C DT 11 1_555 D DA 15 1_555 -0.146 0.149 3.043 0.674 -3.413 40.317 0.570 0.282 3.018 -4.940 -0.976 40.460 10 LL_DT-60DT-59:DA59DA60_MM L -60 ? M 60 ? L -59 ? M 59 ? 1 C DT 11 1_555 D DA 15 1_555 C DT 12 1_555 D DA 14 1_555 -0.329 -0.222 3.099 -5.261 -1.450 36.054 -0.162 -0.171 3.121 -2.327 8.440 36.451 11 LL_DT-59DT-58:DA58DA59_MM L -59 ? M 59 ? L -58 ? M 58 ? 1 C DT 12 1_555 D DA 14 1_555 C DC 13 1_555 D DG 13 1_555 0.390 -0.306 3.257 -1.360 -0.668 38.017 -0.384 -0.770 3.246 -1.025 2.087 38.046 12 LL_DT-58DC-57:DG57DA58_MM L -58 ? M 58 ? L -57 ? M 57 ? 1 C DC 13 1_555 D DG 13 1_555 C DT 14 1_555 D DA 12 1_555 -0.224 -0.583 3.305 0.867 -3.891 32.907 -0.354 0.541 3.343 -6.837 -1.524 33.141 13 LL_DC-57DT-56:DA56DG57_MM L -57 ? M 57 ? L -56 ? M 56 ? 1 C DT 14 1_555 D DA 12 1_555 C DT 15 1_555 D DA 11 1_555 -0.103 -0.509 3.429 -2.387 -2.917 33.806 -0.378 -0.227 3.459 -4.996 4.089 34.010 14 LL_DT-56DT-55:DA55DA56_MM L -56 ? M 56 ? L -55 ? M 55 ? 1 C DT 15 1_555 D DA 11 1_555 C DA 16 1_555 D DT 10 1_555 0.014 -0.508 3.275 -2.324 -6.593 41.936 -0.024 -0.258 3.309 -9.135 3.220 42.489 15 LL_DT-55DA-54:DT54DA55_MM L -55 ? M 55 ? L -54 ? M 54 ? 1 C DA 16 1_555 D DT 10 1_555 C DT 17 1_555 D DA 9 1_555 -0.125 -0.740 3.304 0.864 -1.989 30.309 -1.005 0.415 3.340 -3.798 -1.650 30.384 16 LL_DA-54DT-53:DA53DT54_MM L -54 ? M 54 ? L -53 ? M 53 ? 1 C DT 17 1_555 D DA 9 1_555 C DG 18 1_555 D DC 8 1_555 -0.480 -0.939 3.385 0.169 1.852 39.230 -1.623 0.735 3.337 2.756 -0.252 39.272 17 LL_DT-53DG-52:DC52DA53_MM L -53 ? M 53 ? L -52 ? M 52 ? 1 C DG 18 1_555 D DC 8 1_555 C DT 19 1_555 D DA 7 1_555 -0.484 -0.584 3.119 -8.872 -4.291 27.091 -0.223 -0.996 3.170 -8.799 18.193 28.796 18 LL_DG-52DT-51:DA51DC52_MM L -52 ? M 52 ? L -51 ? M 51 ? 1 C DT 19 1_555 D DA 7 1_555 C DA 20 1_555 D DT 6 1_555 -0.276 0.265 3.072 7.680 2.297 37.899 0.136 1.297 2.973 3.489 -11.666 38.707 19 LL_DT-51DA-50:DT50DA51_MM L -51 ? M 51 ? L -50 ? M 50 ? 1 C DA 20 1_555 D DT 6 1_555 C DA 21 1_555 D DT 5 1_555 0.154 -0.449 3.539 -0.350 2.846 37.814 -1.083 -0.285 3.496 4.383 0.539 37.918 20 LL_DA-50DA-49:DT49DT50_MM L -50 ? M 50 ? L -49 ? M 49 ? 1 C DA 21 1_555 D DT 5 1_555 C DT 22 1_555 D DA 4 1_555 -0.440 -0.062 3.021 -4.486 -2.101 36.146 0.173 0.123 3.051 -3.366 7.188 36.473 21 LL_DA-49DT-48:DA48DT49_MM L -49 ? M 49 ? L -48 ? M 48 ? 1 C DT 22 1_555 D DA 4 1_555 C DA 23 1_555 D DT 3 1_555 0.171 -0.408 3.274 -3.048 -5.152 38.736 0.012 -0.623 3.277 -7.711 4.563 39.179 22 LL_DT-48DA-47:DT47DA48_MM L -48 ? M 48 ? L -47 ? M 47 ? 1 C DA 23 1_555 D DT 3 1_555 C DC 24 1_555 D DG 2 1_555 0.608 -0.790 3.414 4.627 0.686 34.101 -1.447 -0.267 3.449 1.162 -7.843 34.411 23 LL_DA-47DC-46:DG46DT47_MM L -47 ? M 47 ? L -46 ? M 46 ? 1 C DC 24 1_555 D DG 2 1_555 C DG 25 1_555 D DC 1 1_555 0.189 1.204 3.325 0.865 7.103 37.901 0.900 -0.174 3.489 10.818 -1.317 38.546 24 LL_DC-46DG-45:DC45DG46_MM L -46 ? M 46 ? L -45 ? M 45 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Spanish Ministry of Science, Innovation, and Universities' Spain BFU2014-53550-P 1 'Spanish Ministry of Science, Innovation, and Universities' Spain BFU2017-83720-P 2 'Spanish Ministry of Science, Innovation, and Universities' Spain 'PID2020-120141GB- I00' 3 'Spanish Ministry of Science, Innovation, and Universities' Spain MDM-2014-0435 4 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #