data_8B4R # _entry.id 8B4R # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8B4R pdb_00008b4r 10.2210/pdb8b4r/pdb WWPDB D_1292120509 ? ? BMRB 34756 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-10-04 2 'Structure model' 1 1 2024-03-20 3 'Structure model' 1 2 2024-04-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.pdbx_database_id_DOI' 6 2 'Structure model' '_citation.title' 7 2 'Structure model' '_citation.year' 8 3 'Structure model' '_citation.journal_volume' 9 3 'Structure model' '_citation.pdbx_database_id_PubMed' 10 3 'Structure model' '_citation.title' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 8B4R _pdbx_database_status.recvd_initial_deposition_date 2022-09-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Antimicrobial peptide capitellacin from polychaeta Capitella teleta in DPC (dodecylphosphocholine) micelles, monomeric form' _pdbx_database_related.db_id 34756 _pdbx_database_related.content_type unspecified # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 olesya-r@nmr.ru Olesia Reznikova V. 'principal investigator/group leader' 0000-0001-8956-6251 3 a.s.paramonov@gmail.com Alexander Paramonov S 'principal investigator/group leader' 0000-0003-3614-560X 4 zakhar-shenkarev@yandex.ru Zakhar Shenkarev O. 'principal investigator/group leader' 0000-0003-1383-3522 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Mironov, P.A.' 1 0000-0002-7884-3257 'Reznikova, O.V.' 2 0000-0001-8956-6251 'Paramonov, A.S.' 3 0000-0003-3614-560X 'Shenkarev, Z.O.' 4 0000-0003-1383-3522 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country CH _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biomolecules _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2218-273X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 14 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Dimerization of the beta-Hairpin Membrane-Active Cationic Antimicrobial Peptide Capitellacin from Marine Polychaeta: An NMR Structural and Thermodynamic Study. ; _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.3390/biom14030332 _citation.pdbx_database_id_PubMed 38540752 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mironov, P.A.' 1 ? primary 'Paramonov, A.S.' 2 ? primary 'Reznikova, O.V.' 3 ? primary 'Safronova, V.N.' 4 ? primary 'Panteleev, P.V.' 5 ? primary 'Bolosov, I.A.' 6 ? primary 'Ovchinnikova, T.V.' 7 ? primary 'Shenkarev, Z.O.' 8 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'BRICHOS domain-containing protein' _entity.formula_weight 2388.888 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code SPRVCIRVCRNGVCYRRCWG _entity_poly.pdbx_seq_one_letter_code_can SPRVCIRVCRNGVCYRRCWG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 PRO n 1 3 ARG n 1 4 VAL n 1 5 CYS n 1 6 ILE n 1 7 ARG n 1 8 VAL n 1 9 CYS n 1 10 ARG n 1 11 ASN n 1 12 GLY n 1 13 VAL n 1 14 CYS n 1 15 TYR n 1 16 ARG n 1 17 ARG n 1 18 CYS n 1 19 TRP n 1 20 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 20 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CAPTEDRAFT_185237 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Capitella teleta' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 283909 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 1 SER SER A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 ARG 3 3 3 ARG ARG A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 CYS 5 5 5 CYS CYS A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 ARG 7 7 7 ARG ARG A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 CYS 9 9 9 CYS CYS A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 ASN 11 11 11 ASN ASN A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 CYS 14 14 14 CYS CYS A . n A 1 15 TYR 15 15 15 TYR TYR A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 CYS 18 18 18 CYS CYS A . n A 1 19 TRP 19 19 19 TRP TRP A . n A 1 20 GLY 20 20 20 GLY GLY A . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8B4R _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.000 _cell.length_a_esd ? _cell.length_b 1.000 _cell.length_b_esd ? _cell.length_c 1.000 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8B4R _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8B4R _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _database_PDB_matrix.entry_id 8B4R _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 8B4R _struct.title 'Antimicrobial peptide capitellacin from polychaeta Capitella teleta in DPC (dodecylphosphocholine) micelles, monomeric form' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8B4R _struct_keywords.text 'PROTEIN, ANTIMICROBIAL PROTEIN, BETA-HAIRPIN, MONOMER' _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code R7TSD6_CAPTE _struct_ref.pdbx_db_accession R7TSD6 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code SPRVCIRVCRNGVCYRRCWG _struct_ref.pdbx_align_begin 196 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8B4R _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 20 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession R7TSD6 _struct_ref_seq.db_align_beg 196 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 215 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 20 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR Distance Restraints' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 5 SG ? ? ? 1_555 A CYS 18 SG ? ? A CYS 5 A CYS 18 1_555 ? ? ? ? ? ? ? 1.997 ? ? disulf2 disulf ? ? A CYS 9 SG ? ? ? 1_555 A CYS 14 SG ? ? A CYS 9 A CYS 14 1_555 ? ? ? ? ? ? ? 1.987 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 4 ? ILE A 6 ? VAL A 4 ILE A 6 AA1 2 ARG A 17 ? TRP A 19 ? ARG A 17 TRP A 19 AA2 1 CYS A 9 ? ARG A 10 ? CYS A 9 ARG A 10 AA2 2 VAL A 13 ? CYS A 14 ? VAL A 13 CYS A 14 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 6 ? N ILE A 6 O ARG A 17 ? O ARG A 17 AA2 1 2 N ARG A 10 ? N ARG A 10 O VAL A 13 ? O VAL A 13 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 7 ARG A 3 ? ? -109.31 64.73 2 8 ARG A 3 ? ? -112.03 65.55 3 9 ARG A 3 ? ? -113.71 65.75 4 10 ARG A 3 ? ? -105.32 63.44 5 11 ARG A 3 ? ? -110.08 64.95 6 14 ARG A 3 ? ? -110.12 64.91 7 15 ARG A 3 ? ? -105.59 63.06 8 16 ARG A 3 ? ? -111.41 66.11 9 17 ARG A 3 ? ? -110.91 65.42 # _pdbx_nmr_ensemble.entry_id 8B4R _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 8B4R _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'target function' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '0.07 mM [U-15N] capitellacin, 5 % [U-99% 2H] D2O, 14 mM DPC, 95% H2O/5% D2O' '95% H2O/5% D2O' 15N_sample micelle 'The peptide:detergent ratio of 1:200' 2 '0.84 mM capitellacin, 10 % [U-99% 2H] D2O, 100 % water, 168 mM DPC, 95% H2O/5% D2O' '95% H2O/5% D2O' natural_sample micelle 'The peptide:detergent ratio of 1:100' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 capitellacin 0.07 ? mM '[U-15N]' 1 D2O 5 ? % '[U-99% 2H]' 1 DPC 14 ? mM 'natural abundance' 2 capitellacin 0.84 ? mM 'natural abundance' 2 D2O 10 ? % '[U-99% 2H]' 2 water 100 ? % 'natural abundance' 2 DPC 168 ? mM 'natural abundance' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 318 _pdbx_nmr_exptl_sample_conditions.pressure_units Pa _pdbx_nmr_exptl_sample_conditions.pressure AMBIENT _pdbx_nmr_exptl_sample_conditions.pH 5.4 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.001 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units M _pdbx_nmr_exptl_sample_conditions.label condition_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 2 '2D NOESY' 2 anisotropic 2 1 2 '2D TOCSY' 2 anisotropic 3 1 2 '2D 1H-13C HSQC aliphatic' 2 anisotropic 4 1 2 '2D 1H-13C HSQC aromatic' 2 anisotropic 5 1 1 '3D 1H-15N NOESY' 1 anisotropic 6 1 1 '3D HCCH-TOCSY' 1 anisotropic 7 1 1 '3D 1H-13C NOESY' 1 anisotropic # _pdbx_nmr_refine.entry_id 8B4R _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement CYANA 3.98.13 'Guntert, Mumenthaler and Wuthrich' 2 'structure calculation' CYANA 3.98.13 'Guntert, Mumenthaler and Wuthrich' 3 'chemical shift assignment' CARA ? 'Keller and Wuthrich' 4 'peak picking' CARA ? 'Keller and Wuthrich' 5 collection TopSpin ? 'Bruker Biospin' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ARG N N N N 1 ARG CA C N S 2 ARG C C N N 3 ARG O O N N 4 ARG CB C N N 5 ARG CG C N N 6 ARG CD C N N 7 ARG NE N N N 8 ARG CZ C N N 9 ARG NH1 N N N 10 ARG NH2 N N N 11 ARG OXT O N N 12 ARG H H N N 13 ARG H2 H N N 14 ARG HA H N N 15 ARG HB2 H N N 16 ARG HB3 H N N 17 ARG HG2 H N N 18 ARG HG3 H N N 19 ARG HD2 H N N 20 ARG HD3 H N N 21 ARG HE H N N 22 ARG HH11 H N N 23 ARG HH12 H N N 24 ARG HH21 H N N 25 ARG HH22 H N N 26 ARG HXT H N N 27 ASN N N N N 28 ASN CA C N S 29 ASN C C N N 30 ASN O O N N 31 ASN CB C N N 32 ASN CG C N N 33 ASN OD1 O N N 34 ASN ND2 N N N 35 ASN OXT O N N 36 ASN H H N N 37 ASN H2 H N N 38 ASN HA H N N 39 ASN HB2 H N N 40 ASN HB3 H N N 41 ASN HD21 H N N 42 ASN HD22 H N N 43 ASN HXT H N N 44 CYS N N N N 45 CYS CA C N R 46 CYS C C N N 47 CYS O O N N 48 CYS CB C N N 49 CYS SG S N N 50 CYS OXT O N N 51 CYS H H N N 52 CYS H2 H N N 53 CYS HA H N N 54 CYS HB2 H N N 55 CYS HB3 H N N 56 CYS HG H N N 57 CYS HXT H N N 58 GLY N N N N 59 GLY CA C N N 60 GLY C C N N 61 GLY O O N N 62 GLY OXT O N N 63 GLY H H N N 64 GLY H2 H N N 65 GLY HA2 H N N 66 GLY HA3 H N N 67 GLY HXT H N N 68 ILE N N N N 69 ILE CA C N S 70 ILE C C N N 71 ILE O O N N 72 ILE CB C N S 73 ILE CG1 C N N 74 ILE CG2 C N N 75 ILE CD1 C N N 76 ILE OXT O N N 77 ILE H H N N 78 ILE H2 H N N 79 ILE HA H N N 80 ILE HB H N N 81 ILE HG12 H N N 82 ILE HG13 H N N 83 ILE HG21 H N N 84 ILE HG22 H N N 85 ILE HG23 H N N 86 ILE HD11 H N N 87 ILE HD12 H N N 88 ILE HD13 H N N 89 ILE HXT H N N 90 PRO N N N N 91 PRO CA C N S 92 PRO C C N N 93 PRO O O N N 94 PRO CB C N N 95 PRO CG C N N 96 PRO CD C N N 97 PRO OXT O N N 98 PRO H H N N 99 PRO HA H N N 100 PRO HB2 H N N 101 PRO HB3 H N N 102 PRO HG2 H N N 103 PRO HG3 H N N 104 PRO HD2 H N N 105 PRO HD3 H N N 106 PRO HXT H N N 107 SER N N N N 108 SER CA C N S 109 SER C C N N 110 SER O O N N 111 SER CB C N N 112 SER OG O N N 113 SER OXT O N N 114 SER H H N N 115 SER H2 H N N 116 SER HA H N N 117 SER HB2 H N N 118 SER HB3 H N N 119 SER HG H N N 120 SER HXT H N N 121 TRP N N N N 122 TRP CA C N S 123 TRP C C N N 124 TRP O O N N 125 TRP CB C N N 126 TRP CG C Y N 127 TRP CD1 C Y N 128 TRP CD2 C Y N 129 TRP NE1 N Y N 130 TRP CE2 C Y N 131 TRP CE3 C Y N 132 TRP CZ2 C Y N 133 TRP CZ3 C Y N 134 TRP CH2 C Y N 135 TRP OXT O N N 136 TRP H H N N 137 TRP H2 H N N 138 TRP HA H N N 139 TRP HB2 H N N 140 TRP HB3 H N N 141 TRP HD1 H N N 142 TRP HE1 H N N 143 TRP HE3 H N N 144 TRP HZ2 H N N 145 TRP HZ3 H N N 146 TRP HH2 H N N 147 TRP HXT H N N 148 TYR N N N N 149 TYR CA C N S 150 TYR C C N N 151 TYR O O N N 152 TYR CB C N N 153 TYR CG C Y N 154 TYR CD1 C Y N 155 TYR CD2 C Y N 156 TYR CE1 C Y N 157 TYR CE2 C Y N 158 TYR CZ C Y N 159 TYR OH O N N 160 TYR OXT O N N 161 TYR H H N N 162 TYR H2 H N N 163 TYR HA H N N 164 TYR HB2 H N N 165 TYR HB3 H N N 166 TYR HD1 H N N 167 TYR HD2 H N N 168 TYR HE1 H N N 169 TYR HE2 H N N 170 TYR HH H N N 171 TYR HXT H N N 172 VAL N N N N 173 VAL CA C N S 174 VAL C C N N 175 VAL O O N N 176 VAL CB C N N 177 VAL CG1 C N N 178 VAL CG2 C N N 179 VAL OXT O N N 180 VAL H H N N 181 VAL H2 H N N 182 VAL HA H N N 183 VAL HB H N N 184 VAL HG11 H N N 185 VAL HG12 H N N 186 VAL HG13 H N N 187 VAL HG21 H N N 188 VAL HG22 H N N 189 VAL HG23 H N N 190 VAL HXT H N N 191 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ARG N CA sing N N 1 ARG N H sing N N 2 ARG N H2 sing N N 3 ARG CA C sing N N 4 ARG CA CB sing N N 5 ARG CA HA sing N N 6 ARG C O doub N N 7 ARG C OXT sing N N 8 ARG CB CG sing N N 9 ARG CB HB2 sing N N 10 ARG CB HB3 sing N N 11 ARG CG CD sing N N 12 ARG CG HG2 sing N N 13 ARG CG HG3 sing N N 14 ARG CD NE sing N N 15 ARG CD HD2 sing N N 16 ARG CD HD3 sing N N 17 ARG NE CZ sing N N 18 ARG NE HE sing N N 19 ARG CZ NH1 sing N N 20 ARG CZ NH2 doub N N 21 ARG NH1 HH11 sing N N 22 ARG NH1 HH12 sing N N 23 ARG NH2 HH21 sing N N 24 ARG NH2 HH22 sing N N 25 ARG OXT HXT sing N N 26 ASN N CA sing N N 27 ASN N H sing N N 28 ASN N H2 sing N N 29 ASN CA C sing N N 30 ASN CA CB sing N N 31 ASN CA HA sing N N 32 ASN C O doub N N 33 ASN C OXT sing N N 34 ASN CB CG sing N N 35 ASN CB HB2 sing N N 36 ASN CB HB3 sing N N 37 ASN CG OD1 doub N N 38 ASN CG ND2 sing N N 39 ASN ND2 HD21 sing N N 40 ASN ND2 HD22 sing N N 41 ASN OXT HXT sing N N 42 CYS N CA sing N N 43 CYS N H sing N N 44 CYS N H2 sing N N 45 CYS CA C sing N N 46 CYS CA CB sing N N 47 CYS CA HA sing N N 48 CYS C O doub N N 49 CYS C OXT sing N N 50 CYS CB SG sing N N 51 CYS CB HB2 sing N N 52 CYS CB HB3 sing N N 53 CYS SG HG sing N N 54 CYS OXT HXT sing N N 55 GLY N CA sing N N 56 GLY N H sing N N 57 GLY N H2 sing N N 58 GLY CA C sing N N 59 GLY CA HA2 sing N N 60 GLY CA HA3 sing N N 61 GLY C O doub N N 62 GLY C OXT sing N N 63 GLY OXT HXT sing N N 64 ILE N CA sing N N 65 ILE N H sing N N 66 ILE N H2 sing N N 67 ILE CA C sing N N 68 ILE CA CB sing N N 69 ILE CA HA sing N N 70 ILE C O doub N N 71 ILE C OXT sing N N 72 ILE CB CG1 sing N N 73 ILE CB CG2 sing N N 74 ILE CB HB sing N N 75 ILE CG1 CD1 sing N N 76 ILE CG1 HG12 sing N N 77 ILE CG1 HG13 sing N N 78 ILE CG2 HG21 sing N N 79 ILE CG2 HG22 sing N N 80 ILE CG2 HG23 sing N N 81 ILE CD1 HD11 sing N N 82 ILE CD1 HD12 sing N N 83 ILE CD1 HD13 sing N N 84 ILE OXT HXT sing N N 85 PRO N CA sing N N 86 PRO N CD sing N N 87 PRO N H sing N N 88 PRO CA C sing N N 89 PRO CA CB sing N N 90 PRO CA HA sing N N 91 PRO C O doub N N 92 PRO C OXT sing N N 93 PRO CB CG sing N N 94 PRO CB HB2 sing N N 95 PRO CB HB3 sing N N 96 PRO CG CD sing N N 97 PRO CG HG2 sing N N 98 PRO CG HG3 sing N N 99 PRO CD HD2 sing N N 100 PRO CD HD3 sing N N 101 PRO OXT HXT sing N N 102 SER N CA sing N N 103 SER N H sing N N 104 SER N H2 sing N N 105 SER CA C sing N N 106 SER CA CB sing N N 107 SER CA HA sing N N 108 SER C O doub N N 109 SER C OXT sing N N 110 SER CB OG sing N N 111 SER CB HB2 sing N N 112 SER CB HB3 sing N N 113 SER OG HG sing N N 114 SER OXT HXT sing N N 115 TRP N CA sing N N 116 TRP N H sing N N 117 TRP N H2 sing N N 118 TRP CA C sing N N 119 TRP CA CB sing N N 120 TRP CA HA sing N N 121 TRP C O doub N N 122 TRP C OXT sing N N 123 TRP CB CG sing N N 124 TRP CB HB2 sing N N 125 TRP CB HB3 sing N N 126 TRP CG CD1 doub Y N 127 TRP CG CD2 sing Y N 128 TRP CD1 NE1 sing Y N 129 TRP CD1 HD1 sing N N 130 TRP CD2 CE2 doub Y N 131 TRP CD2 CE3 sing Y N 132 TRP NE1 CE2 sing Y N 133 TRP NE1 HE1 sing N N 134 TRP CE2 CZ2 sing Y N 135 TRP CE3 CZ3 doub Y N 136 TRP CE3 HE3 sing N N 137 TRP CZ2 CH2 doub Y N 138 TRP CZ2 HZ2 sing N N 139 TRP CZ3 CH2 sing Y N 140 TRP CZ3 HZ3 sing N N 141 TRP CH2 HH2 sing N N 142 TRP OXT HXT sing N N 143 TYR N CA sing N N 144 TYR N H sing N N 145 TYR N H2 sing N N 146 TYR CA C sing N N 147 TYR CA CB sing N N 148 TYR CA HA sing N N 149 TYR C O doub N N 150 TYR C OXT sing N N 151 TYR CB CG sing N N 152 TYR CB HB2 sing N N 153 TYR CB HB3 sing N N 154 TYR CG CD1 doub Y N 155 TYR CG CD2 sing Y N 156 TYR CD1 CE1 sing Y N 157 TYR CD1 HD1 sing N N 158 TYR CD2 CE2 doub Y N 159 TYR CD2 HD2 sing N N 160 TYR CE1 CZ doub Y N 161 TYR CE1 HE1 sing N N 162 TYR CE2 CZ sing Y N 163 TYR CE2 HE2 sing N N 164 TYR CZ OH sing N N 165 TYR OH HH sing N N 166 TYR OXT HXT sing N N 167 VAL N CA sing N N 168 VAL N H sing N N 169 VAL N H2 sing N N 170 VAL CA C sing N N 171 VAL CA CB sing N N 172 VAL CA HA sing N N 173 VAL C O doub N N 174 VAL C OXT sing N N 175 VAL CB CG1 sing N N 176 VAL CB CG2 sing N N 177 VAL CB HB sing N N 178 VAL CG1 HG11 sing N N 179 VAL CG1 HG12 sing N N 180 VAL CG1 HG13 sing N N 181 VAL CG2 HG21 sing N N 182 VAL CG2 HG22 sing N N 183 VAL CG2 HG23 sing N N 184 VAL OXT HXT sing N N 185 # _pdbx_audit_support.funding_organization 'Ministry of Education and Science of the Russian Federation' _pdbx_audit_support.country 'Russian Federation' _pdbx_audit_support.grant_number 075-15-2021-1049 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 'AVANCE III' ? Bruker 800 ? 2 'AVANCE III' ? Bruker 600 ? # _atom_sites.entry_id 8B4R _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_