HEADER ISOMERASE 24-SEP-22 8B5V TITLE CRYSTAL STRUCTURE OF TRYPANOSOMA CRUZI PHOSPHOMANNOSEMUTASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOMANNOMUTASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 5.4.2.8; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA CRUZI; SOURCE 3 ORGANISM_TAXID: 5693; SOURCE 4 STRAIN: CL BRENER; SOURCE 5 GENE: TC00.1047053510187.480; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRYPANOSOME GLYCOBIOLOGY, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR D.A.ROBINSON,M.A.J.FERGUSON REVDAT 2 31-JAN-24 8B5V 1 REMARK REVDAT 1 05-OCT-22 8B5V 0 JRNL AUTH D.A.ROBINSON,M.A.J.FERGUSON JRNL TITL CRYSTAL STRUCTURE OF TRYPANOSOMA CRUZI PHOSPHOMANNOSEMUTASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.55 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 3 NUMBER OF REFLECTIONS : 60369 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3097 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3555 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 74.46 REMARK 3 BIN R VALUE (WORKING SET) : 0.3120 REMARK 3 BIN FREE R VALUE SET COUNT : 174 REMARK 3 BIN FREE R VALUE : 0.3490 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3956 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 492 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.15000 REMARK 3 B22 (A**2) : -0.28000 REMARK 3 B33 (A**2) : 0.44000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.108 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.104 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.074 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.154 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4044 ; 0.011 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3815 ; 0.001 ; 0.015 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5446 ; 1.720 ; 1.643 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8778 ; 1.454 ; 1.590 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 485 ; 6.496 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 248 ;34.289 ;22.177 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 727 ;12.202 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;18.631 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 499 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4595 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 981 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 8B5V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1292125789. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-DEC-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0-9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96859 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63539 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 29.550 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.15900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.66300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3F9R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SPG PH 8.4, 24% PEG1500, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.19900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.06550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.71350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.06550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.19900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.71350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 245 REMARK 465 MET B 1 REMARK 465 LYS B 245 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 2 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 436 O HOH B 533 1.84 REMARK 500 OG SER B 137 O HOH B 401 1.93 REMARK 500 O HOH A 436 O HOH A 556 1.99 REMARK 500 O HOH B 595 O HOH B 628 2.05 REMARK 500 OE1 GLU A 27 O HOH A 401 2.07 REMARK 500 O HOH B 629 O HOH B 641 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE2 HIS A 209 OD2 ASP B 165 3645 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 99 CG - CD - NE ANGL. DEV. = -15.7 DEGREES REMARK 500 ARG A 99 NE - CZ - NH2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ARG A 132 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG B 99 CG - CD - NE ANGL. DEV. = -12.9 DEGREES REMARK 500 ARG B 99 NE - CZ - NH2 ANGL. DEV. = -6.1 DEGREES REMARK 500 ARG B 132 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 10 -66.46 -105.81 REMARK 500 ARG A 114 -82.77 -131.59 REMARK 500 ARG A 121 -156.26 -98.31 REMARK 500 SER A 243 4.71 -67.81 REMARK 500 ILE B 10 -73.03 -100.84 REMARK 500 ARG B 114 -82.07 -130.93 REMARK 500 THR B 116 66.08 63.11 REMARK 500 ARG B 121 -151.24 -98.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 9 OD2 REMARK 620 2 ASP A 11 O 86.1 REMARK 620 3 ASP A 206 OD1 76.3 84.9 REMARK 620 4 HOH A 498 O 109.7 140.8 133.0 REMARK 620 5 HOH A 516 O 89.6 90.4 165.4 55.4 REMARK 620 6 HOH A 529 O 163.4 77.3 102.2 83.6 90.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 9 OD2 REMARK 620 2 ASP B 11 O 80.1 REMARK 620 3 ASP B 206 OD1 71.2 80.0 REMARK 620 4 HOH B 431 O 88.2 162.0 109.3 REMARK 620 5 HOH B 527 O 161.8 87.0 94.0 107.1 REMARK 620 N 1 2 3 4 DBREF 8B5V A 1 245 UNP Q4E4A3 Q4E4A3_TRYCC 1 245 DBREF 8B5V B 1 245 UNP Q4E4A3 Q4E4A3_TRYCC 1 245 SEQRES 1 A 245 MET LYS LYS VAL LEU LEU LEU PHE ASP ILE ASP GLY THR SEQRES 2 A 245 LEU THR PRO PRO ARG LEU SER GLN PRO ASP GLU VAL ARG SEQRES 3 A 245 GLU VAL ILE ARG ARG ALA LYS SER ALA GLY PHE THR VAL SEQRES 4 A 245 GLY THR VAL GLY GLY SER ASP LEU ALA LYS GLN ILE GLU SEQRES 5 A 245 GLN LEU GLY GLU ASP VAL PHE GLN GLN PHE ASP TYR VAL SEQRES 6 A 245 PHE ALA GLU ASN GLY LEU LEU ALA TYR LYS HIS GLY LYS SEQRES 7 A 245 GLU ILE HIS ARG GLN ASN LEU LEU LYS GLU LEU GLY ASN SEQRES 8 A 245 GLU ARG ILE VAL LYS PHE VAL ARG ARG ALA LEU ARG LEU SEQRES 9 A 245 LEU SER GLU LEU ASP ILE PRO VAL GLN ARG GLY THR PHE SEQRES 10 A 245 ILE GLU TYR ARG ASN GLY MET ILE ASN VAL CYS PRO ILE SEQRES 11 A 245 GLY ARG ASN CYS THR GLN SER GLU ARG ASP GLU PHE GLU SEQRES 12 A 245 VAL TYR ASP LYS GLU HIS HIS VAL ARG GLU LYS LEU ILE SEQRES 13 A 245 LYS GLU LEU GLN ASN SER PHE PRO ASP TYR GLY LEU LYS SEQRES 14 A 245 TYR SER ILE GLY GLY GLN ILE SER PHE ASP VAL PHE PRO SEQRES 15 A 245 VAL GLY TRP ASP LYS SER TYR CYS LEU ARG PHE VAL GLU SEQRES 16 A 245 ASN ASP PHE ASP GLU ILE HIS PHE PHE GLY ASP LYS THR SEQRES 17 A 245 HIS ALA GLY GLY ASN ASP TYR GLU ILE TYR THR ASP LYS SEQRES 18 A 245 ARG ILE ILE GLY HIS ALA VAL LYS SER TYR LYS ASP THR SEQRES 19 A 245 VAL ASP GLU VAL ASN LYS LEU ILE SER SER LYS SEQRES 1 B 245 MET LYS LYS VAL LEU LEU LEU PHE ASP ILE ASP GLY THR SEQRES 2 B 245 LEU THR PRO PRO ARG LEU SER GLN PRO ASP GLU VAL ARG SEQRES 3 B 245 GLU VAL ILE ARG ARG ALA LYS SER ALA GLY PHE THR VAL SEQRES 4 B 245 GLY THR VAL GLY GLY SER ASP LEU ALA LYS GLN ILE GLU SEQRES 5 B 245 GLN LEU GLY GLU ASP VAL PHE GLN GLN PHE ASP TYR VAL SEQRES 6 B 245 PHE ALA GLU ASN GLY LEU LEU ALA TYR LYS HIS GLY LYS SEQRES 7 B 245 GLU ILE HIS ARG GLN ASN LEU LEU LYS GLU LEU GLY ASN SEQRES 8 B 245 GLU ARG ILE VAL LYS PHE VAL ARG ARG ALA LEU ARG LEU SEQRES 9 B 245 LEU SER GLU LEU ASP ILE PRO VAL GLN ARG GLY THR PHE SEQRES 10 B 245 ILE GLU TYR ARG ASN GLY MET ILE ASN VAL CYS PRO ILE SEQRES 11 B 245 GLY ARG ASN CYS THR GLN SER GLU ARG ASP GLU PHE GLU SEQRES 12 B 245 VAL TYR ASP LYS GLU HIS HIS VAL ARG GLU LYS LEU ILE SEQRES 13 B 245 LYS GLU LEU GLN ASN SER PHE PRO ASP TYR GLY LEU LYS SEQRES 14 B 245 TYR SER ILE GLY GLY GLN ILE SER PHE ASP VAL PHE PRO SEQRES 15 B 245 VAL GLY TRP ASP LYS SER TYR CYS LEU ARG PHE VAL GLU SEQRES 16 B 245 ASN ASP PHE ASP GLU ILE HIS PHE PHE GLY ASP LYS THR SEQRES 17 B 245 HIS ALA GLY GLY ASN ASP TYR GLU ILE TYR THR ASP LYS SEQRES 18 B 245 ARG ILE ILE GLY HIS ALA VAL LYS SER TYR LYS ASP THR SEQRES 19 B 245 VAL ASP GLU VAL ASN LYS LEU ILE SER SER LYS HET MG A 301 1 HET PO4 A 302 5 HET MG B 301 1 HET PO4 B 302 5 HETNAM MG MAGNESIUM ION HETNAM PO4 PHOSPHATE ION FORMUL 3 MG 2(MG 2+) FORMUL 4 PO4 2(O4 P 3-) FORMUL 7 HOH *492(H2 O) HELIX 1 AA1 PRO A 22 ALA A 35 1 14 HELIX 2 AA2 ASP A 46 GLY A 55 1 10 HELIX 3 AA3 ASP A 57 PHE A 62 1 6 HELIX 4 AA4 GLU A 68 GLY A 70 5 3 HELIX 5 AA5 ASN A 84 GLU A 107 1 24 HELIX 6 AA6 THR A 135 HIS A 150 1 16 HELIX 7 AA7 HIS A 150 PHE A 163 1 14 HELIX 8 AA8 ASP A 186 VAL A 194 5 9 HELIX 9 AA9 ASP A 214 THR A 219 1 6 HELIX 10 AB1 SER A 230 SER A 243 1 14 HELIX 11 AB2 PRO B 22 GLY B 36 1 15 HELIX 12 AB3 ASP B 46 GLY B 55 1 10 HELIX 13 AB4 ASP B 57 PHE B 62 1 6 HELIX 14 AB5 GLU B 68 GLY B 70 5 3 HELIX 15 AB6 ASN B 84 GLY B 90 1 7 HELIX 16 AB7 GLY B 90 GLU B 107 1 18 HELIX 17 AB8 THR B 135 HIS B 150 1 16 HELIX 18 AB9 HIS B 150 PHE B 163 1 14 HELIX 19 AC1 ASP B 186 VAL B 194 5 9 HELIX 20 AC2 ASP B 214 THR B 219 1 6 HELIX 21 AC3 SER B 230 SER B 243 1 14 SHEET 1 AA1 7 LYS A 78 ARG A 82 0 SHEET 2 AA1 7 LEU A 72 LYS A 75 -1 N ALA A 73 O HIS A 81 SHEET 3 AA1 7 TYR A 64 ALA A 67 -1 N ALA A 67 O LEU A 72 SHEET 4 AA1 7 THR A 38 VAL A 42 1 N THR A 41 O PHE A 66 SHEET 5 AA1 7 VAL A 4 PHE A 8 1 N VAL A 4 O THR A 38 SHEET 6 AA1 7 GLU A 200 GLY A 205 1 O HIS A 202 N LEU A 7 SHEET 7 AA1 7 ILE A 224 ALA A 227 1 O ILE A 224 N ILE A 201 SHEET 1 AA2 4 ILE A 118 TYR A 120 0 SHEET 2 AA2 4 ILE A 125 VAL A 127 -1 O ASN A 126 N GLU A 119 SHEET 3 AA2 4 PHE A 178 PRO A 182 -1 O PHE A 178 N VAL A 127 SHEET 4 AA2 4 LEU A 168 SER A 171 -1 N LYS A 169 O PHE A 181 SHEET 1 AA3 7 LYS B 78 ARG B 82 0 SHEET 2 AA3 7 LEU B 72 LYS B 75 -1 N LYS B 75 O LYS B 78 SHEET 3 AA3 7 TYR B 64 ALA B 67 -1 N ALA B 67 O LEU B 72 SHEET 4 AA3 7 THR B 38 VAL B 42 1 N THR B 41 O PHE B 66 SHEET 5 AA3 7 VAL B 4 PHE B 8 1 N LEU B 6 O GLY B 40 SHEET 6 AA3 7 GLU B 200 GLY B 205 1 O HIS B 202 N LEU B 7 SHEET 7 AA3 7 ILE B 224 ALA B 227 1 O HIS B 226 N PHE B 203 SHEET 1 AA4 4 ILE B 118 TYR B 120 0 SHEET 2 AA4 4 ILE B 125 VAL B 127 -1 O ASN B 126 N GLU B 119 SHEET 3 AA4 4 PHE B 178 PRO B 182 -1 O PHE B 178 N VAL B 127 SHEET 4 AA4 4 LEU B 168 SER B 171 -1 N LYS B 169 O PHE B 181 LINK OD2 ASP A 9 MG MG A 301 1555 1555 2.07 LINK O ASP A 11 MG MG A 301 1555 1555 2.56 LINK OD1 ASP A 206 MG MG A 301 1555 1555 2.34 LINK MG MG A 301 O HOH A 498 1555 1555 2.50 LINK MG MG A 301 O HOH A 516 1555 1555 2.88 LINK MG MG A 301 O HOH A 529 1555 1555 2.29 LINK OD2 ASP B 9 MG MG B 301 1555 1555 2.21 LINK O ASP B 11 MG MG B 301 1555 1555 2.38 LINK OD1 ASP B 206 MG MG B 301 1555 1555 2.40 LINK MG MG B 301 O HOH B 431 1555 1555 2.33 LINK MG MG B 301 O HOH B 527 1555 1555 2.21 CRYST1 40.398 83.427 152.131 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024754 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011987 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006573 0.00000