HEADER TRANSFERASE 26-SEP-22 8B68 TITLE CRYSTAL STRUCTURE OF UDP-GLUCOSE PYROPHOSPHORYLASE FROM THERMOCRISPUM TITLE 2 AGRESTE DSM 44070 IN COMPLEX WITH UDP-GLUCOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: UTP--GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.7.7.9; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOCRISPUM AGRESTE DSM 44070; SOURCE 3 ORGANISM_TAXID: 1111738; SOURCE 4 GENE: DIU77_00305; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCOSYL TRANSFERASE, UDP-GLUCOSE PYROPHOSPHORYLASE, SUGAR KEYWDS 2 METABOLISM, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.U.LAUSTSEN,I.BENTO REVDAT 1 10-JAN-24 8B68 0 JRNL AUTH A.KUMPF,A.MAIER,J.U.LAUSTSEN,C.M.JEFFRIES,I.BENTO,D.TISCHLER JRNL TITL CRYSTAL STRUCTURE DETERMINATION OF A HIGHLY ACTIVE JRNL TITL 2 UDP-GLUCOSE PYROPHOSPHORYLASE FROM THERMOCRISPUM AGRESTE DSM JRNL TITL 3 44070 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0352 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 90.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 87901 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.844 REMARK 3 FREE R VALUE TEST SET COUNT : 4258 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6169 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.3030 REMARK 3 BIN FREE R VALUE SET COUNT : 325 REMARK 3 BIN FREE R VALUE : 0.3040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4371 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 148 REMARK 3 SOLVENT ATOMS : 479 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.35900 REMARK 3 B22 (A**2) : -0.31300 REMARK 3 B33 (A**2) : -0.88700 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.10000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.082 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.082 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.072 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.347 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.966 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4729 ; 0.011 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 4506 ; 0.003 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6403 ; 1.790 ; 1.666 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10502 ; 0.671 ; 1.562 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 602 ; 6.531 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 46 ; 8.777 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 749 ;13.664 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 731 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5396 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 852 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 896 ; 0.207 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 74 ; 0.174 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2189 ; 0.159 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 400 ; 0.149 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2344 ; 2.146 ; 2.228 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2343 ; 2.116 ; 2.227 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2936 ; 3.050 ; 3.330 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2937 ; 3.050 ; 3.330 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2385 ; 3.247 ; 2.655 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2386 ; 3.246 ; 2.656 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3456 ; 4.723 ; 3.811 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3457 ; 4.723 ; 3.812 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 299 REMARK 3 RESIDUE RANGE : B 9 B 299 REMARK 3 ORIGIN FOR THE GROUP (A): -17.8389 -1.4961 33.3882 REMARK 3 T TENSOR REMARK 3 T11: 0.0118 T22: 0.0241 REMARK 3 T33: 0.0166 T12: 0.0029 REMARK 3 T13: -0.0073 T23: 0.0023 REMARK 3 L TENSOR REMARK 3 L11: 0.2953 L22: 1.6652 REMARK 3 L33: 1.7358 L12: 0.0329 REMARK 3 L13: 0.2068 L23: 0.9686 REMARK 3 S TENSOR REMARK 3 S11: 0.0004 S12: -0.0511 S13: 0.0279 REMARK 3 S21: 0.0709 S22: -0.0052 S23: -0.1211 REMARK 3 S31: 0.0728 S32: 0.0906 S33: 0.0048 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 0 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 ORIGIN FOR THE GROUP (A): -15.8188 -29.9963 12.5636 REMARK 3 T TENSOR REMARK 3 T11: 0.1036 T22: 0.0562 REMARK 3 T33: 0.0416 T12: 0.0263 REMARK 3 T13: -0.0064 T23: -0.0167 REMARK 3 L TENSOR REMARK 3 L11: 0.3965 L22: 0.8011 REMARK 3 L33: 1.7344 L12: 0.0473 REMARK 3 L13: -0.0441 L23: 0.9743 REMARK 3 S TENSOR REMARK 3 S11: 0.0430 S12: 0.1182 S13: -0.0371 REMARK 3 S21: -0.0360 S22: 0.0868 S23: -0.1549 REMARK 3 S31: 0.0407 S32: 0.1623 S33: -0.1298 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8B68 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1292125610. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-SEP-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976300 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 87903 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 90.080 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 1.25000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: TGALU-NAT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BIS-TRIS-PROPAN, POLYETHYLENE GLYCOL REMARK 280 3350, POTASSIUM THIOCYANATE (KSCN) AND ETHYLENE GLYCOL, PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.21650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ALA A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 GLU A 6 REMARK 465 HIS A 7 REMARK 465 GLN A 8 REMARK 465 GLY A 231 REMARK 465 ALA A 232 REMARK 465 GLY A 233 REMARK 465 GLY A 234 REMARK 465 GLU A 235 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 ALA B 3 REMARK 465 SER B 4 REMARK 465 ALA B 5 REMARK 465 GLU B 6 REMARK 465 HIS B 7 REMARK 465 GLN B 8 REMARK 465 GLY B 233 REMARK 465 GLY B 234 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ALA B 232 CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 236 O HOH A 401 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 39 -82.30 67.90 REMARK 500 THR A 185 -168.09 -122.75 REMARK 500 ALA B 17 40.96 -140.50 REMARK 500 VAL B 39 -80.73 68.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 192 0.10 SIDE CHAIN REMARK 500 ARG B 23 0.10 SIDE CHAIN REMARK 500 ARG B 52 0.10 SIDE CHAIN REMARK 500 ARG B 219 0.07 SIDE CHAIN REMARK 500 ARG B 227 0.10 SIDE CHAIN REMARK 500 ARG B 272 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 652 DISTANCE = 6.10 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 320 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 UPG A 301 O2A REMARK 620 2 UPG A 301 O2B 94.4 REMARK 620 3 HOH A 515 O 82.4 134.0 REMARK 620 4 HOH A 561 O 90.1 95.1 130.6 REMARK 620 N 1 2 3 DBREF1 8B68 A 1 299 UNP A0A2W4LV58_9PSEU DBREF2 8B68 A A0A2W4LV58 1 299 DBREF1 8B68 B 1 299 UNP A0A2W4LV58_9PSEU DBREF2 8B68 B A0A2W4LV58 1 299 SEQADV 8B68 ASP A 260 UNP A0A2W4LV5 VAL 260 CONFLICT SEQADV 8B68 GLY A 269 UNP A0A2W4LV5 ASP 269 CONFLICT SEQADV 8B68 ASP B 260 UNP A0A2W4LV5 VAL 260 CONFLICT SEQADV 8B68 GLY B 269 UNP A0A2W4LV5 ASP 269 CONFLICT SEQRES 1 A 299 MET THR ALA SER ALA GLU HIS GLN THR PHE THR THR ALA SEQRES 2 A 299 ILE VAL PRO ALA ALA GLY LEU GLY THR ARG PHE LEU PRO SEQRES 3 A 299 THR THR LYS SER VAL PRO LYS GLU LEU LEU PRO VAL VAL SEQRES 4 A 299 ASP THR PRO ALA ILE GLU LEU VAL ALA ASP GLU ALA ARG SEQRES 5 A 299 GLN ALA GLY ALA GLU ARG LEU VAL ILE VAL THR SER PRO SEQRES 6 A 299 ALA LYS GLN SER ILE ALA ALA TYR PHE ARG PRO ALA PRO SEQRES 7 A 299 GLU LEU GLU ARG SER LEU GLU GLU LYS GLY LYS THR GLY SEQRES 8 A 299 GLN LEU ALA LYS ILE ARG ARG ALA PRO GLU LEU LEU GLU SEQRES 9 A 299 VAL GLU VAL ALA ILE GLN GLU GLN ALA LEU GLY LEU GLY SEQRES 10 A 299 HIS ALA VAL ALA CSX ALA GLU PRO ASN LEU GLY PRO GLU SEQRES 11 A 299 ASP ASP VAL VAL ALA VAL LEU LEU PRO ASP ASP LEU VAL SEQRES 12 A 299 LEU PRO HIS GLY ILE LEU GLU ARG MET ALA LYS VAL ARG SEQRES 13 A 299 ALA GLU HIS GLY GLY SER VAL LEU CYS ALA PHE ASP ILE SEQRES 14 A 299 PRO LYS GLU GLU ILE SER ALA TYR GLY VAL PHE ASP VAL SEQRES 15 A 299 SER ASP THR ASP ASP ALA ASP VAL LYS ARG VAL HIS GLY SEQRES 16 A 299 MET VAL GLU LYS PRO PRO ALA GLU GLN ALA PRO SER THR SEQRES 17 A 299 PHE ALA ALA ALA GLY ARG TYR LEU LEU ASP ARG ALA ILE SEQRES 18 A 299 PHE ASP ALA LEU ARG ARG ILE GLU PRO GLY ALA GLY GLY SEQRES 19 A 299 GLU LEU GLN LEU THR ASP ALA VAL ALA LEU LEU ILE GLN SEQRES 20 A 299 GLU GLY HIS PRO VAL HIS VAL VAL VAL HIS ARG GLY ASP SEQRES 21 A 299 ARG HIS ASP LEU GLY ASN PRO GLY GLY PHE LEU ARG ALA SEQRES 22 A 299 ALA VAL ASP PHE ALA LEU GLN ASP PRO ASP TYR GLY PRO SEQRES 23 A 299 GLU LEU ARG ALA TRP LEU THR ASP ARG ILE ALA ARG PRO SEQRES 1 B 299 MET THR ALA SER ALA GLU HIS GLN THR PHE THR THR ALA SEQRES 2 B 299 ILE VAL PRO ALA ALA GLY LEU GLY THR ARG PHE LEU PRO SEQRES 3 B 299 THR THR LYS SER VAL PRO LYS GLU LEU LEU PRO VAL VAL SEQRES 4 B 299 ASP THR PRO ALA ILE GLU LEU VAL ALA ASP GLU ALA ARG SEQRES 5 B 299 GLN ALA GLY ALA GLU ARG LEU VAL ILE VAL THR SER PRO SEQRES 6 B 299 ALA LYS GLN SER ILE ALA ALA TYR PHE ARG PRO ALA PRO SEQRES 7 B 299 GLU LEU GLU ARG SER LEU GLU GLU LYS GLY LYS THR GLY SEQRES 8 B 299 GLN LEU ALA LYS ILE ARG ARG ALA PRO GLU LEU LEU GLU SEQRES 9 B 299 VAL GLU VAL ALA ILE GLN GLU GLN ALA LEU GLY LEU GLY SEQRES 10 B 299 HIS ALA VAL ALA CSX ALA GLU PRO ASN LEU GLY PRO GLU SEQRES 11 B 299 ASP ASP VAL VAL ALA VAL LEU LEU PRO ASP ASP LEU VAL SEQRES 12 B 299 LEU PRO HIS GLY ILE LEU GLU ARG MET ALA LYS VAL ARG SEQRES 13 B 299 ALA GLU HIS GLY GLY SER VAL LEU CYS ALA PHE ASP ILE SEQRES 14 B 299 PRO LYS GLU GLU ILE SER ALA TYR GLY VAL PHE ASP VAL SEQRES 15 B 299 SER ASP THR ASP ASP ALA ASP VAL LYS ARG VAL HIS GLY SEQRES 16 B 299 MET VAL GLU LYS PRO PRO ALA GLU GLN ALA PRO SER THR SEQRES 17 B 299 PHE ALA ALA ALA GLY ARG TYR LEU LEU ASP ARG ALA ILE SEQRES 18 B 299 PHE ASP ALA LEU ARG ARG ILE GLU PRO GLY ALA GLY GLY SEQRES 19 B 299 GLU LEU GLN LEU THR ASP ALA VAL ALA LEU LEU ILE GLN SEQRES 20 B 299 GLU GLY HIS PRO VAL HIS VAL VAL VAL HIS ARG GLY ASP SEQRES 21 B 299 ARG HIS ASP LEU GLY ASN PRO GLY GLY PHE LEU ARG ALA SEQRES 22 B 299 ALA VAL ASP PHE ALA LEU GLN ASP PRO ASP TYR GLY PRO SEQRES 23 B 299 GLU LEU ARG ALA TRP LEU THR ASP ARG ILE ALA ARG PRO MODRES 8B68 CSX A 122 CYS MODIFIED RESIDUE MODRES 8B68 CSX B 122 CYS MODIFIED RESIDUE HET CSX A 122 20 HET CSX B 122 12 HET UPG A 301 58 HET EDO A 302 10 HET EDO A 303 20 HET EDO A 304 20 HET EDO A 305 10 HET PEG A 306 17 HET EDO A 307 10 HET EDO A 308 10 HET EDO A 309 10 HET EDO A 310 10 HET EDO A 311 10 HET EDO A 312 10 HET EDO A 313 10 HET EDO A 314 10 HET EDO A 315 10 HET PEG A 316 17 HET EDO A 317 10 HET SCN A 318 3 HET EDO A 319 10 HET MG A 320 1 HET PEG B 301 34 HET EDO B 302 10 HET EDO B 303 10 HET EDO B 304 10 HET PEG B 305 17 HET EDO B 306 10 HET EDO B 307 10 HETNAM CSX S-OXY CYSTEINE HETNAM UPG URIDINE-5'-DIPHOSPHATE-GLUCOSE HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM SCN THIOCYANATE ION HETNAM MG MAGNESIUM ION HETSYN UPG URIDINE-5'-MONOPHOSPHATE GLUCOPYRANOSYL-MONOPHOSPHATE HETSYN 2 UPG ESTER HETSYN EDO ETHYLENE GLYCOL FORMUL 1 CSX 2(C3 H7 N O3 S) FORMUL 3 UPG C15 H24 N2 O17 P2 FORMUL 4 EDO 20(C2 H6 O2) FORMUL 8 PEG 4(C4 H10 O3) FORMUL 20 SCN C N S 1- FORMUL 22 MG MG 2+ FORMUL 30 HOH *479(H2 O) HELIX 1 AA1 GLY A 21 LEU A 25 5 5 HELIX 2 AA2 PRO A 26 SER A 30 5 5 HELIX 3 AA3 PRO A 32 LEU A 35 5 4 HELIX 4 AA4 ALA A 43 ALA A 54 1 12 HELIX 5 AA5 SER A 64 GLN A 68 5 5 HELIX 6 AA6 SER A 69 PHE A 74 1 6 HELIX 7 AA7 ALA A 77 LYS A 87 1 11 HELIX 8 AA8 LYS A 89 ALA A 99 1 11 HELIX 9 AA9 PRO A 100 LEU A 102 5 3 HELIX 10 AB1 GLY A 115 CSX A 122 1 8 HELIX 11 AB2 ALA A 123 LEU A 127 5 5 HELIX 12 AB3 GLY A 147 GLY A 160 1 14 HELIX 13 AB4 PRO A 170 ILE A 174 5 5 HELIX 14 AB5 PRO A 201 ALA A 205 5 5 HELIX 15 AB6 ARG A 219 ILE A 228 1 10 HELIX 16 AB7 GLN A 237 GLU A 248 1 12 HELIX 17 AB8 ASN A 266 LEU A 279 1 14 HELIX 18 AB9 TYR A 284 ILE A 296 1 13 HELIX 19 AC1 GLY B 21 LEU B 25 5 5 HELIX 20 AC2 PRO B 26 SER B 30 5 5 HELIX 21 AC3 PRO B 32 LEU B 35 5 4 HELIX 22 AC4 ALA B 43 ALA B 54 1 12 HELIX 23 AC5 SER B 64 ARG B 75 5 12 HELIX 24 AC6 ALA B 77 LYS B 87 1 11 HELIX 25 AC7 LYS B 89 LEU B 103 1 15 HELIX 26 AC8 GLY B 115 ALA B 123 1 9 HELIX 27 AC9 GLU B 124 LEU B 127 5 4 HELIX 28 AD1 GLY B 147 GLY B 160 1 14 HELIX 29 AD2 PRO B 170 ILE B 174 5 5 HELIX 30 AD3 PRO B 201 ALA B 205 5 5 HELIX 31 AD4 ARG B 219 ILE B 228 1 10 HELIX 32 AD5 GLN B 237 GLU B 248 1 12 HELIX 33 AD6 ASN B 266 GLN B 280 1 15 HELIX 34 AD7 TYR B 284 ILE B 296 1 13 SHEET 1 AA110 GLU A 104 ILE A 109 0 SHEET 2 AA110 ARG A 58 THR A 63 1 N LEU A 59 O GLU A 104 SHEET 3 AA110 THR A 12 PRO A 16 1 N ALA A 13 O VAL A 60 SHEET 4 AA110 VAL A 133 LEU A 137 1 O ALA A 135 N ILE A 14 SHEET 5 AA110 PHE A 209 ASP A 218 -1 O LEU A 217 N VAL A 134 SHEET 6 AA110 GLY A 178 ASP A 184 -1 N GLY A 178 O ALA A 211 SHEET 7 AA110 VAL A 190 GLU A 198 -1 O HIS A 194 N ASP A 181 SHEET 8 AA110 VAL A 252 HIS A 257 -1 O VAL A 252 N VAL A 193 SHEET 9 AA110 SER A 162 ASP A 168 1 N ALA A 166 O HIS A 257 SHEET 10 AA110 PHE A 209 ASP A 218 -1 O LEU A 216 N VAL A 163 SHEET 1 AA2 2 PRO A 37 VAL A 38 0 SHEET 2 AA2 2 THR A 41 PRO A 42 -1 O THR A 41 N VAL A 38 SHEET 1 AA3 2 ASP A 141 LEU A 144 0 SHEET 2 AA3 2 ASP A 260 ASP A 263 -1 O HIS A 262 N LEU A 142 SHEET 1 AA410 GLU B 104 ILE B 109 0 SHEET 2 AA410 ARG B 58 THR B 63 1 N LEU B 59 O GLU B 104 SHEET 3 AA410 THR B 12 PRO B 16 1 N VAL B 15 O VAL B 60 SHEET 4 AA410 VAL B 133 LEU B 137 1 O ALA B 135 N ILE B 14 SHEET 5 AA410 PHE B 209 ASP B 218 -1 O LEU B 217 N VAL B 134 SHEET 6 AA410 GLY B 178 ASP B 184 -1 N GLY B 178 O ALA B 211 SHEET 7 AA410 VAL B 190 GLU B 198 -1 O HIS B 194 N ASP B 181 SHEET 8 AA410 VAL B 252 HIS B 257 -1 O VAL B 252 N VAL B 193 SHEET 9 AA410 SER B 162 ASP B 168 1 N ALA B 166 O HIS B 257 SHEET 10 AA410 PHE B 209 ASP B 218 -1 O ALA B 210 N PHE B 167 SHEET 1 AA5 2 PRO B 37 VAL B 38 0 SHEET 2 AA5 2 THR B 41 PRO B 42 -1 O THR B 41 N VAL B 38 SHEET 1 AA6 2 ASP B 141 LEU B 144 0 SHEET 2 AA6 2 ASP B 260 ASP B 263 -1 O HIS B 262 N LEU B 142 LINK C ALA A 121 N CSX A 122 1555 1555 1.36 LINK C CSX A 122 N ALA A 123 1555 1555 1.35 LINK C ALA B 121 N CSX B 122 1555 1555 1.35 LINK C CSX B 122 N ALA B 123 1555 1555 1.34 LINK O2A UPG A 301 MG A MG A 320 1555 1555 2.36 LINK O2B UPG A 301 MG A MG A 320 1555 1555 2.06 LINK MG A MG A 320 O AHOH A 515 1555 1555 1.99 LINK MG A MG A 320 O AHOH A 561 1555 1555 1.99 CISPEP 1 LEU A 25 PRO A 26 0 7.63 CISPEP 2 LEU A 144 PRO A 145 0 -10.03 CISPEP 3 LEU B 25 PRO B 26 0 7.27 CISPEP 4 LEU B 144 PRO B 145 0 -10.94 CRYST1 48.036 78.433 90.289 90.00 93.90 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020818 0.000000 0.001421 0.00000 SCALE2 0.000000 0.012750 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011101 0.00000