HEADER OXIDOREDUCTASE 28-SEP-22 8B74 TITLE TYROSINASE FROM HALOPHILIC BACTERIUM HAHELLA SP. CCB MM4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: OXIDOREDUCTASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HAHELLA; SOURCE 3 ORGANISM_TAXID: 158481; SOURCE 4 GENE: BTA51_09820; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS TYROSINASE, PROCARYOTE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.K.ROHR,G.A.SANTOS,A.N.ENGLUND REVDAT 1 11-OCT-23 8B74 0 JRNL AUTH A.K.ROHR,G.A.SANTOS,A.N.ENGLUND,E.LANDSEM JRNL TITL TYROSINASE FROM HALOPHILIC BACTERIUM HAHELLA SP. CCB MM4 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0352 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 78.27 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 32381 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.808 REMARK 3 FREE R VALUE TEST SET COUNT : 1557 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.97 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2245 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.83 REMARK 3 BIN R VALUE (WORKING SET) : 0.2580 REMARK 3 BIN FREE R VALUE SET COUNT : 115 REMARK 3 BIN FREE R VALUE : 0.3040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3408 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 183 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.96100 REMARK 3 B22 (A**2) : -1.92600 REMARK 3 B33 (A**2) : -1.03500 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.164 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.155 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.117 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.291 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3530 ; 0.015 ; 0.011 REMARK 3 BOND LENGTHS OTHERS (A): 2987 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4819 ; 2.111 ; 1.642 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6980 ; 0.735 ; 1.562 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 432 ; 8.049 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 18 ;10.550 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 524 ;17.102 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 501 ; 0.109 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4107 ; 0.014 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 741 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 717 ; 0.233 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 70 ; 0.316 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1716 ; 0.189 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 165 ; 0.160 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1731 ; 4.133 ; 3.323 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1731 ; 4.136 ; 3.324 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2162 ; 5.348 ; 4.940 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2163 ; 5.354 ; 4.942 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1799 ; 6.438 ; 3.669 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1800 ; 6.437 ; 3.672 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2657 ; 8.082 ; 5.325 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2658 ; 8.081 ; 5.327 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8B74 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1292125868. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32382 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.965 REMARK 200 RESOLUTION RANGE LOW (A) : 78.271 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.56500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: ALPHAFOLD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LISO4, 0.1 BIS-TRIS PH 5.5, 20 % REMARK 280 (W/V) PEG 4000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.14900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.14900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 302 REMARK 465 THR A 303 REMARK 465 THR A 304 REMARK 465 PRO A 305 REMARK 465 ALA A 306 REMARK 465 ARG A 307 REMARK 465 ARG A 308 REMARK 465 SER A 309 REMARK 465 VAL A 310 REMARK 465 PRO A 311 REMARK 465 ALA A 312 REMARK 465 MET A 313 REMARK 465 ASP A 314 REMARK 465 PRO A 338 REMARK 465 GLN A 339 REMARK 465 PRO A 340 REMARK 465 ALA A 341 REMARK 465 ARG A 342 REMARK 465 GLY A 343 REMARK 465 ALA A 344 REMARK 465 ARG A 345 REMARK 465 LEU A 346 REMARK 465 LEU A 347 REMARK 465 ALA A 348 REMARK 465 ALA A 349 REMARK 465 ARG A 350 REMARK 465 GLY A 351 REMARK 465 GLY A 352 REMARK 465 ASP A 353 REMARK 465 GLU A 354 REMARK 465 LYS A 355 REMARK 465 VAL A 407 REMARK 465 GLU A 408 REMARK 465 GLU A 464 REMARK 465 ILE A 465 REMARK 465 ASP A 466 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG1 THR A 80 H TYR A 82 1.28 REMARK 500 OE2 GLU A 400 O HOH A 501 1.88 REMARK 500 OE2 GLU A 387 O HOH A 502 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HZ3 LYS A 11 H ASP A 333 1545 1.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASP A 13 CG ASP A 13 OD1 0.240 REMARK 500 GLU A 400 CD GLU A 400 OE1 0.069 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 13 CB - CG - OD1 ANGL. DEV. = 7.1 DEGREES REMARK 500 ASP A 13 CB - CG - OD2 ANGL. DEV. = -10.2 DEGREES REMARK 500 ARG A 28 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 28 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ILE A 279 CA - CB - CG1 ANGL. DEV. = 14.2 DEGREES REMARK 500 CYS A 393 CB - CA - C ANGL. DEV. = 8.5 DEGREES REMARK 500 CYS A 393 CB - CA - C ANGL. DEV. = -20.3 DEGREES REMARK 500 ARG A 458 NE - CZ - NH1 ANGL. DEV. = 6.3 DEGREES REMARK 500 HIS A 462 CB - CA - C ANGL. DEV. = -12.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 80 149.42 -174.54 REMARK 500 ASN A 158 22.17 81.46 REMARK 500 ASP A 186 171.46 -47.38 REMARK 500 SER A 199 66.10 -154.28 REMARK 500 ASN A 219 -159.37 58.49 REMARK 500 PHE A 298 -71.47 -35.69 REMARK 500 ALA A 321 171.16 179.02 REMARK 500 HIS A 328 79.14 -155.69 REMARK 500 THR A 335 93.52 -8.83 REMARK 500 ASN A 379 -25.90 -141.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 297 PHE A 298 -143.93 REMARK 500 LEU A 334 THR A 335 146.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 356 0.07 SIDE CHAIN REMARK 500 ARG A 428 0.10 SIDE CHAIN REMARK 500 ARG A 458 0.11 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF1 8B74 A 1 466 UNP A0A261GRE4_9GAMM DBREF2 8B74 A A0A261GRE4 1 466 SEQRES 1 A 466 MET LYS THR ARG GLN ASN VAL TYR GLU LEU LYS ASP ASP SEQRES 2 A 466 THR LEU SER TRP TYR SER ARG ALA VAL GLU GLU MET LYS SEQRES 3 A 466 SER ARG ASP ILE ASN ASP PRO THR SER TRP TRP TYR GLN SEQRES 4 A 466 GLY ALA ILE HIS GLY TYR ALA THR TYR PRO SER ALA LEU SEQRES 5 A 466 THR TYR TRP HIS ASP ALA THR GLY TYR PRO PRO SER GLN SEQRES 6 A 466 GLN THR VAL ASN SER GLY PHE TRP ASN ARG CYS GLN HIS SEQRES 7 A 466 GLY THR TRP TYR PHE LEU PRO TRP HIS ARG MET TYR LEU SEQRES 8 A 466 PHE TYR PHE GLU GLU ILE VAL ALA LYS ALA ILE ARG ASP SEQRES 9 A 466 MET GLY GLY PRO ALA ASP TRP THR LEU PRO TYR TRP ASN SEQRES 10 A 466 TYR CYS GLU ALA TYR ASN THR SER ALA SER PRO SER ASN SEQRES 11 A 466 GLN GLN GLN ALA LEU GLN ILE PRO PRO GLU PHE GLY SER SEQRES 12 A 466 SER GLN GLY PRO ASN ALA ASP PHE ALA SER LEU TRP ILE SEQRES 13 A 466 LYS ASN ARG ARG ASN TYR VAL LEU ASN LYS ASN ASN VAL SEQRES 14 A 466 ASN PRO TRP PRO ALA MET ASN GLU ALA GLU PHE THR ASN SEQRES 15 A 466 SER GLY GLY ASP ILE SER PHE GLY GLY GLY VAL THR GLY SEQRES 16 A 466 PHE ALA HIS SER GLY GLY GLN THR GLY GLN LEU GLU SER SEQRES 17 A 466 LEU PRO HIS ASN VAL VAL HIS THR ASP ILE ASN GLY ALA SEQRES 18 A 466 MET GLY ASN PRO ASP THR ALA ALA LEU ASP PRO ILE PHE SEQRES 19 A 466 TRP LEU HIS HIS ALA ASN ILE ASP ARG LEU TRP GLN VAL SEQRES 20 A 466 TRP LEU ALA GLN ALA GLY ARG SER ASN PRO VAL VAL ASN SEQRES 21 A 466 ALA TRP LYS ASP PHE ARG PHE LYS PHE HIS ASP ALA ASN SEQRES 22 A 466 GLY GLN PRO VAL GLU ILE ALA VAL LYS ASP VAL GLU THR SEQRES 23 A 466 THR GLN LEU LEU GLY TYR VAL TYR THR PRO ALA PHE PRO SEQRES 24 A 466 LEU SER SER THR THR PRO ALA ARG ARG SER VAL PRO ALA SEQRES 25 A 466 MET ASP VAL VAL GLY ALA THR SER ALA SER PHE SER VAL SEQRES 26 A 466 GLY ASP HIS MET ALA PRO LEU ASP LEU THR MET VAL PRO SEQRES 27 A 466 GLN PRO ALA ARG GLY ALA ARG LEU LEU ALA ALA ARG GLY SEQRES 28 A 466 GLY ASP GLU LYS ARG THR ILE LEU ARG ILE SER ASN VAL SEQRES 29 A 466 LYS GLY LYS GLY ALA THR SER PRO ILE ASP LEU PHE ILE SEQRES 30 A 466 THR ASN ARG ASP ASN GLU GLU GLY ASN GLU GLU ASN PHE SEQRES 31 A 466 VAL GLY CYS ILE GLY LEU PHE GLY LEU GLU ASN ALA SER SEQRES 32 A 466 THR PRO SER VAL GLU SER ASP GLY SER GLY LEU ASN PHE SEQRES 33 A 466 ALA ILE ASP ILE SER ASP THR ILE ASN LYS LEU ARG GLN SEQRES 34 A 466 ARG ASP ASP TRP ASP GLU ASP ASN ILE ARG VAL GLN LEU SEQRES 35 A 466 ILE PRO GLN SER LYS GLN ASP SER ASP VAL GLU ILE ASN SEQRES 36 A 466 VAL GLY ARG VAL SER LEU HIS SER GLU ILE ASP FORMUL 2 HOH *183(H2 O) HELIX 1 AA1 ASN A 6 LEU A 10 5 5 HELIX 2 AA2 ASP A 13 ARG A 28 1 16 HELIX 3 AA3 SER A 35 GLY A 44 1 10 HELIX 4 AA4 TYR A 48 HIS A 56 1 9 HELIX 5 AA5 SER A 64 ASN A 69 1 6 HELIX 6 AA6 TYR A 82 MET A 105 1 24 HELIX 7 AA7 ASN A 117 ASN A 123 5 7 HELIX 8 AA8 SER A 127 ALA A 134 1 8 HELIX 9 AA9 PRO A 138 GLY A 142 5 5 HELIX 10 AB1 PHE A 151 TRP A 155 5 5 HELIX 11 AB2 ASN A 165 ASN A 170 5 6 HELIX 12 AB3 PRO A 171 ASN A 176 1 6 HELIX 13 AB4 GLY A 204 LEU A 209 1 6 HELIX 14 AB5 PRO A 210 ASN A 219 1 10 HELIX 15 AB6 GLY A 220 ASN A 224 5 5 HELIX 16 AB7 THR A 227 ASP A 231 5 5 HELIX 17 AB8 ILE A 233 ALA A 250 1 18 HELIX 18 AB9 VAL A 259 ASP A 264 1 6 HELIX 19 AC1 LYS A 282 GLU A 285 5 4 HELIX 20 AC2 THR A 287 LEU A 290 5 4 HELIX 21 AC3 GLY A 398 SER A 403 1 6 HELIX 22 AC4 ILE A 420 GLN A 429 1 10 HELIX 23 AC5 ASP A 434 ASN A 437 5 4 SHEET 1 AA1 2 LYS A 2 ARG A 4 0 SHEET 2 AA1 2 TYR A 292 TYR A 294 1 O VAL A 293 N ARG A 4 SHEET 1 AA2 2 ARG A 266 HIS A 270 0 SHEET 2 AA2 2 PRO A 276 ALA A 280 -1 O VAL A 277 N PHE A 269 SHEET 1 AA3 4 PHE A 323 SER A 324 0 SHEET 2 AA3 4 GLU A 453 HIS A 462 -1 O VAL A 456 N PHE A 323 SHEET 3 AA3 4 GLY A 317 ALA A 318 -1 N GLY A 317 O LEU A 461 SHEET 4 AA3 4 THR A 335 MET A 336 -1 O THR A 335 N ALA A 318 SHEET 1 AA4 4 PHE A 323 SER A 324 0 SHEET 2 AA4 4 GLU A 453 HIS A 462 -1 O VAL A 456 N PHE A 323 SHEET 3 AA4 4 ILE A 358 LYS A 367 -1 N SER A 362 O ARG A 458 SHEET 4 AA4 4 LEU A 414 ASP A 419 -1 O LEU A 414 N VAL A 364 SHEET 1 AA5 4 LEU A 332 ASP A 333 0 SHEET 2 AA5 4 ARG A 439 PRO A 444 -1 O VAL A 440 N LEU A 332 SHEET 3 AA5 4 ILE A 373 THR A 378 -1 N ASP A 374 O ILE A 443 SHEET 4 AA5 4 PHE A 390 ILE A 394 -1 O ILE A 394 N ILE A 373 CISPEP 1 TYR A 61 PRO A 62 0 6.55 CISPEP 2 LEU A 209 PRO A 210 0 2.19 CRYST1 51.140 55.572 156.298 90.00 90.00 90.00 P 2 2 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019554 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017995 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006398 0.00000